RLG00000004925

protein kinase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0016335
Physical Location & Seq
Forward (+)
63700302 .. 63703442
3141 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000004925

Sequence Viewer

Length: 894 bp
ATGCCCCGAAGCCGCAGCCGAAAGCTGACTCAGCCCTCTCTCGGGAGCCGTGAGAATAGCCGCTGTTTACTTTTTACTGTTGTCGGCGCCGGTATGGGTGGGTGTGAGTCGGCTTCCAGATTCGGCTTGACAAGTGGTCGGGTGGCGTTTCGAGGAGGAAAACAGGTGGGAGAAGTTAGGGTGGTGTTGGGGATCAGTAACCCTAATGGGAAGAGACCCCGAGATGATGACTCGGCCGACTCGGGACGGAACGAGGCTGCAGAGTTTCGTCCCGAGTCAAAACTCATCCGAGTTGATTCCAGCAGCTCAATTAACTCGGATGCAAGCTCGGGTGACTCCAACGTCCGAGTTGACTCGGACGAGTTCGACATGGACTCGGCCGAGGCGAAGATGATTCAGGAAGACCTGTTGTACATACTGGACGACTCGGAGGCCGTGACGGACCGTGACCCGGCAATTCAGGGGCTGGACTCGGTCATTAAAAGCTTCGAGGAGGAGATACAAGTTCCGGCAGCACCCGCATTTGCTCCTCCGCTTGAAACGACGTCGGGCTCGGGAGAGTCGTCCCCGTCGTCGCAGCCGGAGCTCGGTTACTTACTGGAGGCTTCGGACGACGAGCTAGGTCTTCCGCCGACGAACAATGGAGCTGTGAGCGAGGAGAAGAAAATGGAGGCAGCGGATTTCACGGTGAGTCCTCCGGCGGCCGCATTGGACGGAATGCTTGGGTTCGAGAACGACATGATTCCGAGTTACGACGCGTTCGATTTCGGAATCGGTGGGTACTCGGAGAGTAATGGCGGCGGAGAGTACGTAGCGTTGGGTGGCTTGTTTGACTACTCGGACGGCGGCGCTACGGAGGTGTCGTGGCGGACGGAGTCGCTTTCTGCTCTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

298

Amino Acids

31.34

Weight (kDa)

4.22

Isoelectric Point (pI)

54.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016335)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g12280
malus_domestica MD06G1215300.v1.1 MD14G1226200.v1.1
prunus_persica Prupe.5G220600_v2.0.a1
pyrus_communis pycom06g19200
rosa_chinensis RchiOBHm_Chr7g0185281
rosa_laevigata RLG00000004925
rosa_multiflora Rmu_sc0008496.1_g000015
rosa_roxburghii Rroxscaffold_3G00269090
rosa_rugosa Rorug06G0467500
rosa_samantha Rh7AG075200 Rh7BG072000 Rh7CG073200 Rh7DG072700
rosa_wichuraiana Rw7G006050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 341
AatII GACGTC 1 cut(s) 548
AccB1I GGYRCC 1 cut(s) 86
AccII CGCG 1 cut(s) 758
AclWI GGATC 1 cut(s) 200
AcoI YGGCCR 3 cut(s) 234, 378, 702
AcyI GRCGYC 2 cut(s) 87, 545
AfaI GTAC 3 cut(s) 413, 782, 809
AfiI CCNNNNNNNGG 4 cut(s) 41, 42, 451, 587
AflIII ACRYGT 1 cut(s) 756
AgsI TTSAA 1 cut(s) 539
AhdI GACNNNNNGTC 1 cut(s) 135
AluBI AGCT 7 cut(s) 25, 306, 327, 486, 586, 619, 647
AluI AGCT 7 cut(s) 25, 306, 327, 486, 586, 619, 647
Alw21I GWGCWC 1 cut(s) 588
Alw26I GTCTC 1 cut(s) 208
AlwI GGATC 1 cut(s) 200
AlwNI CAGNNNCTG 1 cut(s) 466
Ama87I CYCGRG 6 cut(s) 41, 219, 241, 272, 328, 553
AoxI GGCC 4 cut(s) 234, 378, 432, 702
ApeKI GCWGC 6 cut(s) 15, 257, 303, 512, 577, 674
AspLEI GCGC 2 cut(s) 89, 851
AspS9I GGNCC 1 cut(s) 442
AsuC2I CCSGG 1 cut(s) 452
AsuHPI GGTGA 2 cut(s) 344, 700
AvaI CYCGRG 6 cut(s) 41, 219, 241, 272, 328, 553
AvaII GGWCC 1 cut(s) 442
BanI GGYRCC 1 cut(s) 86
BanII GRGCYC 2 cut(s) 554, 588
BbsI GAAGAC 2 cut(s) 408, 617
Bbv12I GWGCWC 1 cut(s) 588
BbvI GCAGC 6 cut(s) 27, 244, 315, 524, 589, 686
BceAI ACGGC 3 cut(s) 33, 419, 859
BcnI CCSGG 1 cut(s) 452
BcoDI GTCTC 1 cut(s) 208
BfaI CTAG 1 cut(s) 620
BfmI CTRYAG 2 cut(s) 258, 890
BfoI RGCGCY 2 cut(s) 90, 852
Bme1390I CCNGG 1 cut(s) 452
Bme18I GGWCC 1 cut(s) 442
BmeRI GACNNNNNGTC 1 cut(s) 135
BmeT110I CYCGRG 6 cut(s) 41, 219, 241, 272, 328, 553
BmgT120I GGNCC 1 cut(s) 442
BmiI GGNNCC 2 cut(s) 47, 88
BmrFI CCNGG 1 cut(s) 452
BmsI GCATC 1 cut(s) 310
BpiI GAAGAC 2 cut(s) 408, 617
BpmI CTGGAG 1 cut(s) 620
BpuMI CCSGG 1 cut(s) 452
BsaAI YACGTR 1 cut(s) 811
BsaHI GRCGYC 2 cut(s) 87, 545
BsaI GGTCTC 1 cut(s) 208
BsaJI CCNNGG 1 cut(s) 381
BsaXI ACNNNNNCTCC 4 cut(s) 795, 825, 848, 878
Bsc4I CCNNNNNNNGG 4 cut(s) 41, 42, 451, 587
Bse118I RCCGGY 1 cut(s) 89
Bse1I ACTGG 2 cut(s) 423, 603
BseDI CCNNGG 1 cut(s) 381
BseGI GGATG 2 cut(s) 285, 325
BseLI CCNNNNNNNGG 4 cut(s) 41, 42, 451, 587
BseMII CTCAG 1 cut(s) 44
BseNI ACTGG 2 cut(s) 423, 603
BseRI GAGGAG 5 cut(s) 168, 506, 509, 519, 671
BseX3I CGGCCG 3 cut(s) 234, 378, 702
BseXI GCAGC 6 cut(s) 27, 244, 315, 524, 589, 686
Bsh1236I CGCG 1 cut(s) 758
Bsh1285I CGRYCG 3 cut(s) 237, 381, 705
BshFI GGCC 4 cut(s) 236, 380, 434, 704
BshNI GGYRCC 1 cut(s) 86
BsiEI CGRYCG 3 cut(s) 237, 381, 705
BsiHKAI GWGCWC 1 cut(s) 588
BsiHKCI CYCGRG 6 cut(s) 41, 219, 241, 272, 328, 553
BsiSI CCGG 5 cut(s) 90, 452, 509, 581, 698
BslFI GGGAC 3 cut(s) 255, 258, 550
BslI CCNNNNNNNGG 4 cut(s) 41, 42, 451, 587
BsmAI GTCTC 1 cut(s) 208
BsmFI GGGAC 3 cut(s) 255, 258, 550
BsmI GAATGC 1 cut(s) 723
BsnI GGCC 4 cut(s) 236, 380, 434, 704
Bso31I GGTCTC 1 cut(s) 208
BsoBI CYCGRG 6 cut(s) 41, 219, 241, 272, 328, 553
Bsp1286I GDGCHC 2 cut(s) 554, 588
Bsp1407I TGTACA 1 cut(s) 411
Bsp143I GATC 1 cut(s) 192
BspANI GGCC 4 cut(s) 236, 380, 434, 704
BspCNI CTCAG 1 cut(s) 43
BspFNI CGCG 1 cut(s) 758
BspLI GGNNCC 2 cut(s) 47, 88
BspMAI CTGCAG 1 cut(s) 262
BspPI GGATC 1 cut(s) 200
BspT107I GGYRCC 1 cut(s) 86
BspTNI GGTCTC 1 cut(s) 208
BsrFI RCCGGY 1 cut(s) 89
BsrGI TGTACA 1 cut(s) 411
BsrI ACTGG 2 cut(s) 423, 603
BssAI RCCGGY 1 cut(s) 89
BssECI CCNNGG 1 cut(s) 381
BssMI GATC 1 cut(s) 192
BssNI GRCGYC 2 cut(s) 87, 545
Bst4CI ACNGT 3 cut(s) 79, 446, 688
Bst6I CTCTTC 1 cut(s) 206
BstACI GRCGYC 2 cut(s) 87, 545
BstAUI TGTACA 1 cut(s) 411
BstBAI YACGTR 1 cut(s) 811
BstC8I GCNNGC 1 cut(s) 325
BstDEI CTNAG 1 cut(s) 30
BstF5I GGATG 2 cut(s) 285, 325
BstFNI CGCG 1 cut(s) 758
BstH2I RGCGCY 2 cut(s) 90, 852
BstHHI GCGC 2 cut(s) 89, 851
BstKTI GATC 1 cut(s) 195
BstMAI GTCTC 1 cut(s) 208
BstMBI GATC 1 cut(s) 192
BstMCI CGRYCG 3 cut(s) 237, 381, 705
BstMWI GCNNNNNNNGC 3 cut(s) 31, 518, 583
BstSCI CCNGG 1 cut(s) 450
BstSFI CTRYAG 2 cut(s) 258, 890
BstSNI TACGTA 1 cut(s) 811
BstUI CGCG 1 cut(s) 758
BstV1I GCAGC 6 cut(s) 27, 244, 315, 524, 589, 686
BstV2I GAAGAC 2 cut(s) 408, 617
BstZI CGGCCG 3 cut(s) 234, 378, 702
BsuRI GGCC 4 cut(s) 236, 380, 434, 704
BtsCI GGATG 2 cut(s) 285, 325
Cac8I GCNNGC 1 cut(s) 325
CaiI CAGNNNCTG 1 cut(s) 466
CciNI GCGGCCGC 1 cut(s) 702
CfoI GCGC 2 cut(s) 89, 851
Cfr10I RCCGGY 1 cut(s) 89
Cfr13I GGNCC 1 cut(s) 442
CpoI CGGWCCG 1 cut(s) 442
CseI GACGC 1 cut(s) 764
Csp6I GTAC 3 cut(s) 412, 781, 808
CspI CGGWCCG 1 cut(s) 442
CviAII CATG 2 cut(s) 370, 739
CviQI GTAC 3 cut(s) 412, 781, 808
DdeI CTNAG 1 cut(s) 30
DinI GGCGCC 1 cut(s) 88
DpnI GATC 1 cut(s) 194
DpnII GATC 1 cut(s) 192
DrdI GACNNNNNNGTC 1 cut(s) 341
DriI GACNNNNNGTC 1 cut(s) 135
DseDI GACNNNNNNGTC 1 cut(s) 341
EaeI YGGCCR 3 cut(s) 234, 378, 702
EagI CGGCCG 3 cut(s) 234, 378, 702
Eam1104I CTCTTC 1 cut(s) 206
Eam1105I GACNNNNNGTC 1 cut(s) 135
EarI CTCTTC 1 cut(s) 206
EciI GGCGGA 3 cut(s) 618, 816, 883
Ecl136II GAGCTC 1 cut(s) 586
EclXI CGGCCG 3 cut(s) 234, 378, 702
Eco105I TACGTA 1 cut(s) 811
Eco24I GRGCYC 2 cut(s) 554, 588
Eco31I GGTCTC 1 cut(s) 208
Eco47I GGWCC 1 cut(s) 442
Eco52I CGGCCG 3 cut(s) 234, 378, 702
Eco53kI GAGCTC 1 cut(s) 586
Eco88I CYCGRG 6 cut(s) 41, 219, 241, 272, 328, 553
EcoICRI GAGCTC 1 cut(s) 586
EcoT38I GRGCYC 2 cut(s) 554, 588
EgeI GGCGCC 1 cut(s) 88
EheI GGCGCC 1 cut(s) 88
FaeI CATG 2 cut(s) 373, 742
FaiI YATR 4 cut(s) 95, 371, 416, 740
FaqI GGGAC 3 cut(s) 255, 258, 550
FatI CATG 2 cut(s) 369, 738
FauI CCCGC 1 cut(s) 526
FokI GGATG 2 cut(s) 272, 332
FriOI GRGCYC 2 cut(s) 554, 588
FspBI CTAG 1 cut(s) 620
GlaI GCGC 2 cut(s) 88, 850
GsuI CTGGAG 1 cut(s) 620
HaeII RGCGCY 2 cut(s) 90, 852
HaeIII GGCC 4 cut(s) 236, 380, 434, 704
HapII CCGG 5 cut(s) 90, 452, 509, 581, 698
HgaI GACGC 1 cut(s) 764
HhaI GCGC 2 cut(s) 89, 851
Hin1I GRCGYC 2 cut(s) 87, 545
Hin1II CATG 2 cut(s) 373, 742
Hin6I GCGC 2 cut(s) 87, 849
HinP1I GCGC 2 cut(s) 87, 849
HincII GTYRAC 1 cut(s) 352
HindII GTYRAC 1 cut(s) 352
HindIII AAGCTT 1 cut(s) 484
HpaII CCGG 5 cut(s) 90, 452, 509, 581, 698
HphI GGTGA 2 cut(s) 344, 700
Hpy166II GTNNAC 2 cut(s) 68, 352
Hpy188III TCNNGA 7 cut(s) 43, 117, 243, 272, 398, 555, 730
Hpy8I GTNNAC 2 cut(s) 68, 352
Hpy99I CGWCG 7 cut(s) 547, 550, 574, 577, 617, 637, 758
HpyCH4III ACNGT 3 cut(s) 79, 446, 688
HpyCH4IV ACGT 3 cut(s) 342, 545, 810
HpyCH4V TGCA 2 cut(s) 260, 323
HpyF10VI GCNNNNNNNGC 3 cut(s) 31, 518, 583
HpyF3I CTNAG 1 cut(s) 30
HpySE526I ACGT 3 cut(s) 342, 545, 810
Hsp92I GRCGYC 2 cut(s) 87, 545
Hsp92II CATG 2 cut(s) 373, 742
HspAI GCGC 2 cut(s) 87, 849
KasI GGCGCC 1 cut(s) 86
Kzo9I GATC 1 cut(s) 192
LmnI GCTCC 4 cut(s) 45, 532, 583, 644
Lsp1109I GCAGC 6 cut(s) 27, 244, 315, 524, 589, 686
LweI GCATC 1 cut(s) 310
MaeI CTAG 1 cut(s) 620
MaeII ACGT 3 cut(s) 342, 545, 810
MaeIII GTNAC 6 cut(s) 197, 332, 436, 446, 590, 749
MalI GATC 1 cut(s) 194
MboI GATC 1 cut(s) 192
MboII GAAGA 5 cut(s) 223, 400, 413, 617, 673
MhlI GDGCHC 2 cut(s) 554, 588
MluCI AATT 2 cut(s) 309, 456
MluI ACGCGT 1 cut(s) 756
Mly113I GGCGCC 1 cut(s) 87
MmeI TCCRAC 1 cut(s) 363
MseI TTAA 2 cut(s) 312, 480
MspA1I CMGCKG 2 cut(s) 63, 677
MspI CCGG 5 cut(s) 90, 452, 509, 581, 698
MspR9I CCNGG 1 cut(s) 452
Mva1269I GAATGC 1 cut(s) 723
MvnI CGCG 1 cut(s) 758
MwoI GCNNNNNNNGC 3 cut(s) 31, 518, 583
NarI GGCGCC 1 cut(s) 87
NciI CCSGG 1 cut(s) 452
NdeII GATC 1 cut(s) 192
NlaIII CATG 2 cut(s) 373, 742
NlaIV GGNNCC 2 cut(s) 47, 88
NmeAIII GCCGAG 3 cut(s) 212, 356, 406
NmuCI GTSAC 3 cut(s) 332, 436, 446
NotI GCGGCCGC 1 cut(s) 702
PcsI WCGNNNNNNNCGW 5 cut(s) 383, 560, 569, 759, 860
PctI GAATGC 1 cut(s) 723
PfeI GAWTC 5 cut(s) 120, 296, 394, 742, 771
PflFI GACNNNGTC 2 cut(s) 473, 874
PluTI GGCGCC 1 cut(s) 90
Ppu21I YACGTR 1 cut(s) 811
Psp124BI GAGCTC 1 cut(s) 588
PspN4I GGNNCC 2 cut(s) 47, 88
PspPI GGNCC 1 cut(s) 442
PstI CTGCAG 1 cut(s) 262
PstNI CAGNNNCTG 1 cut(s) 466
PsyI GACNNNGTC 2 cut(s) 473, 874
RsaI GTAC 3 cut(s) 413, 782, 809
RsaNI GTAC 3 cut(s) 412, 781, 808
Rsr2I CGGWCCG 1 cut(s) 442
RsrII CGGWCCG 1 cut(s) 442
SacI GAGCTC 1 cut(s) 588
SaqAI TTAA 2 cut(s) 312, 480
Sau3AI GATC 1 cut(s) 192
Sau96I GGNCC 1 cut(s) 442
ScrFI CCNGG 1 cut(s) 452
SduI GDGCHC 2 cut(s) 554, 588
SfaNI GCATC 1 cut(s) 310
SfcI CTRYAG 2 cut(s) 258, 890
SfoI GGCGCC 1 cut(s) 88
SinI GGWCC 1 cut(s) 442
SnaBI TACGTA 1 cut(s) 811
Sse9I AATT 2 cut(s) 309, 456
SspDI GGCGCC 1 cut(s) 86
SspMI CTAG 1 cut(s) 620
SstI GAGCTC 1 cut(s) 588
StyD4I CCNGG 1 cut(s) 450
TaaI ACNGT 3 cut(s) 79, 446, 688
TaiI ACGT 3 cut(s) 345, 548, 813
TaqI TCGA 5 cut(s) 151, 366, 489, 729, 762
TaqII GACCGA 1 cut(s) 463
TasI AATT 2 cut(s) 309, 456
TatI WGTACW 1 cut(s) 411
TauI GCSGC 6 cut(s) 15, 63, 704, 707, 801, 849
TfiI GAWTC 5 cut(s) 120, 296, 394, 742, 771
Tru1I TTAA 2 cut(s) 312, 480
Tru9I TTAA 2 cut(s) 312, 480
TseFI GTSAC 3 cut(s) 332, 436, 446
TseI GCWGC 6 cut(s) 15, 257, 303, 512, 577, 674
Tsp45I GTSAC 3 cut(s) 332, 436, 446
TspGWI ACGGA 5 cut(s) 262, 455, 729, 869, 887
Tth111I GACNNNGTC 2 cut(s) 473, 874
VpaK11BI GGWCC 1 cut(s) 442
XspI CTAG 1 cut(s) 620
ZraI GACGTC 1 cut(s) 546
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.