pycom06g19200

protein kinase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
OG0016335
Physical Location & Seq
Reverse (-)
22651679 .. 22652410
732 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom06g19200.1

Sequence Viewer

Length: 732 bp
ATGGATGACACAAGCAACCACAATAGGAAGCGAGCCCGAGATGACTCGGACAACTCAGAAGCCAATAGCACCCAACCCGATACAAAACTCATCCGAGTCGACTCGAGCAACTCGGTTGCCAGCTCCCACGAGTCGGGCTCCACCGGAGATGAATCGAACAACTCGGATATTAACTCGGGCGAGTCATCGACTCAGACTCCCGACCGAGTTAACTCGGACGAGTTTGGTATGGGGTCGGCGGAGGTCAAGCTGATACAAGACGACCTACTTAACATCCTGGACGACTCGGACGCCGTCCCGGAGATTCAAGACCTTGACTCGGTGATTAAGAGCTTCGAGGAGGAGATACAAGTTCCGGCATTTCCCGCGTCCGAAGACACGTCGGCTTCAGGCGAGTCGACGCAACCAGAGCTTGGTTACCTTCTGGAAGCTTCGGACGACGAGCTTGGTCTCCCACCGACCAATGGAGCAAATGAGGAGGAAAAAATCGAGGCCGCTGATTTCACCGAGAGTGGTTTCGAGGCCTTTCGATTTGATGGCATGGTAGGGTTCGATAACGACATGATTCCAAGCTACGACTCGTTCGATTTCGGAATCGGTGGCGACTCTGAATTTATTAATGACAGTTATATTGGCGGGGAGGAGTACTTGGCGTTAGGCGGTTTGTTTGATTACTCCGGCGGCGGCGTTTCGGATGATTCGTGGCGGACCGAGTCGCTTTCCGCTTCGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

244

Amino Acids

26.07

Weight (kDa)

4.05

Isoelectric Point (pI)

48.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016335)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g12280
malus_domestica MD06G1215300.v1.1 MD14G1226200.v1.1
prunus_persica Prupe.5G220600_v2.0.a1
pyrus_communis pycom06g19200
rosa_chinensis RchiOBHm_Chr7g0185281
rosa_laevigata RLG00000004925
rosa_multiflora Rmu_sc0008496.1_g000015
rosa_roxburghii Rroxscaffold_3G00269090
rosa_rugosa Rorug06G0467500
rosa_samantha Rh7AG075200 Rh7BG072000 Rh7CG073200 Rh7DG072700
rosa_wichuraiana Rw7G006050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 413
AccI GTMKAC 2 cut(s) 99, 398
AccII CGCG 1 cut(s) 368
AciI CCGC 9 cut(s) 239, 366, 495, 636, 660, 681, 684, 706, 723
AcsI RAATTY 1 cut(s) 611
AcuI CTGAAG 1 cut(s) 372
AcyI GRCGYC 1 cut(s) 291
AfaI GTAC 1 cut(s) 647
AfiI CCNNNNNNNGG 4 cut(s) 133, 319, 413, 464
AflIII ACRYGT 1 cut(s) 378
AgsI TTSAA 1 cut(s) 308
AjiI CACGTC 1 cut(s) 381
AjnI CCWGG 1 cut(s) 276
AluBI AGCT 7 cut(s) 123, 250, 333, 412, 431, 445, 573
AluI AGCT 7 cut(s) 123, 250, 333, 412, 431, 445, 573
Alw26I GTCTC 1 cut(s) 455
Ama87I CYCGRG 3 cut(s) 36, 103, 175
AoxI GGCC 2 cut(s) 492, 522
ApoI RAATTY 1 cut(s) 611
AseI ATTAAT 1 cut(s) 618
AspS9I GGNCC 1 cut(s) 708
AsuC2I CCSGG 1 cut(s) 299
AsuHPI GGTGA 2 cut(s) 334, 496
AvaI CYCGRG 3 cut(s) 36, 103, 175
AvaII GGWCC 1 cut(s) 708
BanII GRGCYC 2 cut(s) 37, 140
BauI CACGAG 1 cut(s) 128
BbsI GAAGAC 1 cut(s) 381
BccI CCATC 1 cut(s) 530
BceAI ACGGC 1 cut(s) 278
BciT130I CCWGG 1 cut(s) 278
BcnI CCSGG 1 cut(s) 299
BcoDI GTCTC 1 cut(s) 455
BisI GCNGC 3 cut(s) 495, 682, 685
BlsI GCNGC 3 cut(s) 496, 683, 686
BmcAI AGTACT 1 cut(s) 647
Bme1390I CCNGG 2 cut(s) 278, 299
Bme18I GGWCC 1 cut(s) 708
BmeT110I CYCGRG 3 cut(s) 36, 103, 175
BmgBI CACGTC 1 cut(s) 381
BmgT120I GGNCC 1 cut(s) 708
BmiI GGNNCC 1 cut(s) 139
BmrFI CCNGG 2 cut(s) 278, 299
BpiI GAAGAC 1 cut(s) 381
BplI GAGNNNNNCTC 2 cut(s) 122, 154
BpuMI CCSGG 1 cut(s) 299
BsaHI GRCGYC 1 cut(s) 291
BsaI GGTCTC 1 cut(s) 455
BsaWI WCCGGW 1 cut(s) 143
BsaXI ACNNNNNCTCC 2 cut(s) 181, 211
Bsc4I CCNNNNNNNGG 4 cut(s) 133, 319, 413, 464
BseBI CCWGG 1 cut(s) 278
BseGI GGATG 4 cut(s) 10, 90, 273, 700
BseLI CCNNNNNNNGG 4 cut(s) 133, 319, 413, 464
BseMII CTCAG 2 cut(s) 69, 206
BseRI GAGGAG 4 cut(s) 353, 356, 491, 656
Bsh1236I CGCG 1 cut(s) 368
Bsh1285I CGRYCG 1 cut(s) 205
BshFI GGCC 2 cut(s) 494, 524
BsiEI CGRYCG 1 cut(s) 205
BsiHKCI CYCGRG 3 cut(s) 36, 103, 175
BsiSI CCGG 4 cut(s) 144, 299, 356, 678
BslFI GGGAC 1 cut(s) 281
BslI CCNNNNNNNGG 4 cut(s) 133, 319, 413, 464
BsmAI GTCTC 1 cut(s) 455
BsmFI GGGAC 1 cut(s) 281
BsnI GGCC 2 cut(s) 494, 524
Bso31I GGTCTC 1 cut(s) 455
BsoBI CYCGRG 3 cut(s) 36, 103, 175
Bsp1286I GDGCHC 2 cut(s) 37, 140
BspACI CCGC 9 cut(s) 239, 366, 495, 636, 660, 681, 684, 706, 723
BspANI GGCC 2 cut(s) 494, 524
BspCNI CTCAG 2 cut(s) 68, 205
BspFNI CGCG 1 cut(s) 368
BspLI GGNNCC 1 cut(s) 139
BspTNI GGTCTC 1 cut(s) 455
BssNI GRCGYC 1 cut(s) 291
BssSI CACGAG 1 cut(s) 128
Bst2BI CACGAG 1 cut(s) 128
Bst2UI CCWGG 1 cut(s) 278
Bst4CI ACNGT 1 cut(s) 626
BstACI GRCGYC 1 cut(s) 291
BstC8I GCNNGC 2 cut(s) 33, 121
BstDEI CTNAG 2 cut(s) 55, 192
BstEII GGTNACC 1 cut(s) 416
BstF5I GGATG 4 cut(s) 10, 90, 273, 700
BstFNI CGCG 1 cut(s) 368
BstMAI GTCTC 1 cut(s) 455
BstMCI CGRYCG 1 cut(s) 205
BstMWI GCNNNNNNNGC 2 cut(s) 365, 409
BstNI CCWGG 1 cut(s) 278
BstPI GGTNACC 1 cut(s) 416
BstSCI CCNGG 2 cut(s) 276, 297
BstUI CGCG 1 cut(s) 368
BstV2I GAAGAC 1 cut(s) 381
BsuRI GGCC 2 cut(s) 494, 524
BtrI CACGTC 1 cut(s) 381
BtsCI GGATG 4 cut(s) 10, 90, 273, 700
Cac8I GCNNGC 2 cut(s) 33, 121
Cfr13I GGNCC 1 cut(s) 708
CpoI CGGWCCG 1 cut(s) 708
CseI GACGC 3 cut(s) 299, 357, 409
Csp6I GTAC 1 cut(s) 646
CspI CGGWCCG 1 cut(s) 708
CviAII CATG 2 cut(s) 541, 562
CviQI GTAC 1 cut(s) 646
DdeI CTNAG 2 cut(s) 55, 192
EciI GGCGGA 2 cut(s) 254, 721
Eco147I AGGCCT 1 cut(s) 524
Eco24I GRGCYC 2 cut(s) 37, 140
Eco31I GGTCTC 1 cut(s) 455
Eco47I GGWCC 1 cut(s) 708
Eco57I CTGAAG 1 cut(s) 372
Eco88I CYCGRG 3 cut(s) 36, 103, 175
Eco91I GGTNACC 1 cut(s) 416
EcoO65I GGTNACC 1 cut(s) 416
EcoRII CCWGG 1 cut(s) 276
EcoT38I GRGCYC 2 cut(s) 37, 140
FaeI CATG 2 cut(s) 544, 565
FaiI YATR 4 cut(s) 230, 542, 563, 630
FaqI GGGAC 1 cut(s) 281
FatI CATG 2 cut(s) 540, 561
FauI CCCGC 2 cut(s) 373, 629
FblI GTMKAC 2 cut(s) 99, 398
Fnu4HI GCNGC 3 cut(s) 495, 682, 685
FokI GGATG 4 cut(s) 17, 77, 260, 707
FriOI GRGCYC 2 cut(s) 37, 140
Fsp4HI GCNGC 3 cut(s) 495, 682, 685
GluI GCNGC 3 cut(s) 495, 682, 685
HaeIII GGCC 2 cut(s) 494, 524
HapII CCGG 4 cut(s) 144, 299, 356, 678
HgaI GACGC 3 cut(s) 299, 357, 409
Hin1I GRCGYC 1 cut(s) 291
Hin1II CATG 2 cut(s) 544, 565
HincII GTYRAC 3 cut(s) 100, 211, 399
HindII GTYRAC 3 cut(s) 100, 211, 399
HindIII AAGCTT 1 cut(s) 429
HpaI GTTAAC 1 cut(s) 211
HpaII CCGG 4 cut(s) 144, 299, 356, 678
HphI GGTGA 2 cut(s) 334, 496
Hpy166II GTNNAC 3 cut(s) 100, 211, 399
Hpy188III TCNNGA 3 cut(s) 200, 308, 425
Hpy8I GTNNAC 3 cut(s) 100, 211, 399
Hpy99I CGWCG 3 cut(s) 385, 403, 443
HpyAV CCTTC 1 cut(s) 431
HpyCH4III ACNGT 1 cut(s) 626
HpyCH4IV ACGT 1 cut(s) 380
HpyF10VI GCNNNNNNNGC 2 cut(s) 365, 409
HpyF3I CTNAG 2 cut(s) 55, 192
HpySE526I ACGT 1 cut(s) 380
Hsp92I GRCGYC 1 cut(s) 291
Hsp92II CATG 2 cut(s) 544, 565
KspAI GTTAAC 1 cut(s) 211
LmnI GCTCC 3 cut(s) 128, 143, 467
MaeII ACGT 1 cut(s) 380
MaeIII GTNAC 1 cut(s) 416
MboII GAAGA 1 cut(s) 386
MhlI GDGCHC 2 cut(s) 37, 140
MluCI AATT 1 cut(s) 611
MnlI CCTC 8 cut(s) 235, 331, 334, 469, 472, 484, 514, 634
MseI TTAA 5 cut(s) 171, 210, 270, 327, 618
MspA1I CMGCKG 1 cut(s) 497
MspI CCGG 4 cut(s) 144, 299, 356, 678
MspR9I CCNGG 2 cut(s) 278, 299
MvaI CCWGG 1 cut(s) 278
MvnI CGCG 1 cut(s) 368
MwoI GCNNNNNNNGC 2 cut(s) 365, 409
NciI CCSGG 1 cut(s) 299
NlaIII CATG 2 cut(s) 544, 565
NlaIV GGNNCC 1 cut(s) 139
PaeR7I CTCGAG 1 cut(s) 103
PceI AGGCCT 1 cut(s) 524
PcsI WCGNNNNNNNCGW 2 cut(s) 582, 698
PfeI GAWTC 5 cut(s) 152, 304, 565, 594, 698
PflFI GACNNNGTC 2 cut(s) 293, 712
PflMI CCANNNNNTGG 1 cut(s) 413
PfoI TCCNGGA 2 cut(s) 276, 297
PkrI GCNGC 3 cut(s) 496, 683, 686
PshBI ATTAAT 1 cut(s) 618
Psp6I CCWGG 1 cut(s) 276
PspEI GGTNACC 1 cut(s) 416
PspGI CCWGG 1 cut(s) 276
PspN4I GGNNCC 1 cut(s) 139
PspPI GGNCC 1 cut(s) 708
PspXI VCTCGAGB 1 cut(s) 103
PsyI GACNNNGTC 2 cut(s) 293, 712
RsaI GTAC 1 cut(s) 647
RsaNI GTAC 1 cut(s) 646
Rsr2I CGGWCCG 1 cut(s) 708
RsrII CGGWCCG 1 cut(s) 708
SalI GTCGAC 2 cut(s) 98, 397
SaqAI TTAA 5 cut(s) 171, 210, 270, 327, 618
SatI GCNGC 3 cut(s) 495, 682, 685
Sau96I GGNCC 1 cut(s) 708
ScaI AGTACT 1 cut(s) 647
ScrFI CCNGG 2 cut(s) 278, 299
SduI GDGCHC 2 cut(s) 37, 140
Sfr274I CTCGAG 1 cut(s) 103
SinI GGWCC 1 cut(s) 708
SlaI CTCGAG 1 cut(s) 103
SmlI CTYRAG 1 cut(s) 103
SmoI CTYRAG 1 cut(s) 103
Sse9I AATT 1 cut(s) 611
SseBI AGGCCT 1 cut(s) 524
SsiI CCGC 9 cut(s) 239, 366, 495, 636, 660, 681, 684, 706, 723
StuI AGGCCT 1 cut(s) 524
StyD4I CCNGG 2 cut(s) 276, 297
TaaI ACNGT 1 cut(s) 626
TaiI ACGT 1 cut(s) 383
TaqII GACCGA 2 cut(s) 219, 725
TasI AATT 1 cut(s) 611
TatI WGTACW 1 cut(s) 645
TauI GCSGC 3 cut(s) 497, 684, 687
TfiI GAWTC 5 cut(s) 152, 304, 565, 594, 698
Tru1I TTAA 5 cut(s) 171, 210, 270, 327, 618
Tru9I TTAA 5 cut(s) 171, 210, 270, 327, 618
TspDTI ATGAA 1 cut(s) 165
Tth111I GACNNNGTC 2 cut(s) 293, 712
Van91I CCANNNNNTGG 1 cut(s) 413
VpaK11BI GGWCC 1 cut(s) 708
VspI ATTAAT 1 cut(s) 618
XapI RAATTY 1 cut(s) 611
XhoI CTCGAG 1 cut(s) 103
XmiI GTMKAC 2 cut(s) 99, 398
ZrmI AGTACT 1 cut(s) 647
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.