Prupe.5G220600_v2.0.a1

protein kinase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
OG0016335
Physical Location & Seq
Reverse (-)
17179325 .. 17182017
2693 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G220600.1

Sequence Viewer

Length: 741 bp
ATGGATAACAGCATCAACCACAATAGGAAACGACCCCGATATGACTCGGACCACCCAGAAACAAATCATACCCAACCCGAGTCCAAACTCGTCCGAGTCAACTCGAGTCACTCAGTTACCTGCTCGCCCGAGTCCGGTTCCACCGTGTTCGACTCGACCAACTCGGAGGTGAACTCGGACGAGTCGTTGACTCCTCAGCCTGTCCGGGTCGACTCGGACGAGTTGGTTATGGAGTCGGAGGAGGTTAAGCTGATCCAAGACGACCTCCTCAACATCCTGGACGATTCGGACACCGTTACCGACCGTGACCCGGCGATCCAGGACCTTGACTCGGTGATTAAAAGCTTCGAGGAAGAGATACAGGTTCCGGCATTTCCCGTGTCCGAAACGACGTCGTCTCCAGGCGGGTCGTCGCAGCCGGAATTAGGTTACCTTCTAGAGGCTTCCGACGACGAACTCGGCCTCCCTCCGACCAATGGAGGAAGCGAGGACGGAAAGTTGGAGGCCGCTGATTTTACGTCGAGTGGTTCGGAGGCAGTTGGATTGGACGGGATGCTAGGGTTTGAGAACGACATCATTCCGAATTACGACTCGTTTGAGTTGGGAATTGGTGGCGACTGTAACTTGAACAACAATTATAATGGCGGGGCGGAGTACGTGGCATTAGGTGGGTTGTTTGATTACTCGGATGGCGGCGTTTCGGATGTTTCGTGGCGAAACGAATCGCTCTCTGCTCTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

247

Amino Acids

26.45

Weight (kDa)

4.05

Isoelectric Point (pI)

50.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016335)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g12280
malus_domestica MD06G1215300.v1.1 MD14G1226200.v1.1
prunus_persica Prupe.5G220600_v2.0.a1
pyrus_communis pycom06g19200
rosa_chinensis RchiOBHm_Chr7g0185281
rosa_laevigata RLG00000004925
rosa_multiflora Rmu_sc0008496.1_g000015
rosa_roxburghii Rroxscaffold_3G00269090
rosa_rugosa Rorug06G0467500
rosa_samantha Rh7AG075200 Rh7BG072000 Rh7CG073200 Rh7DG072700
rosa_wichuraiana Rw7G006050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 639
AatII GACGTC 1 cut(s) 395
Acc36I ACCTGC 1 cut(s) 128
AccI GTMKAC 1 cut(s) 210
AciI CCGC 5 cut(s) 405, 507, 645, 650, 693
AclWI GGATC 2 cut(s) 247, 310
AcyI GRCGYC 1 cut(s) 392
AfaI GTAC 1 cut(s) 656
AfiI CCNNNNNNNGG 6 cut(s) 134, 310, 331, 425, 439, 476
AgsI TTSAA 1 cut(s) 628
AjnI CCWGG 3 cut(s) 276, 318, 400
AloI GAACNNNNNNTCC 2 cut(s) 447, 479
AluBI AGCT 2 cut(s) 250, 345
AluI AGCT 2 cut(s) 250, 345
Alw26I GTCTC 1 cut(s) 402
AlwI GGATC 2 cut(s) 247, 310
Ama87I CYCGRG 3 cut(s) 77, 103, 128
AoxI GGCC 2 cut(s) 460, 504
ApeKI GCWGC 1 cut(s) 415
AspS9I GGNCC 2 cut(s) 49, 322
AsuC2I CCSGG 2 cut(s) 206, 311
AsuHPI GGTGA 2 cut(s) 181, 346
AvaI CYCGRG 3 cut(s) 77, 103, 128
AvaII GGWCC 2 cut(s) 49, 322
BbvCI CCTCAGC 1 cut(s) 195
BbvI GCAGC 1 cut(s) 427
BccI CCATC 1 cut(s) 683
BciT130I CCWGG 3 cut(s) 278, 320, 402
BcnI CCSGG 2 cut(s) 206, 311
BcoDI GTCTC 1 cut(s) 402
BfaI CTAG 2 cut(s) 437, 557
BfmI CTRYAG 1 cut(s) 737
BfuAI ACCTGC 1 cut(s) 128
BisI GCNGC 3 cut(s) 416, 507, 694
BlsI GCNGC 3 cut(s) 417, 508, 695
Bme1390I CCNGG 5 cut(s) 206, 278, 311, 320, 402
Bme18I GGWCC 2 cut(s) 49, 322
BmeT110I CYCGRG 3 cut(s) 77, 103, 128
BmgT120I GGNCC 2 cut(s) 49, 322
BmiI GGNNCC 2 cut(s) 139, 366
BmrFI CCNGG 5 cut(s) 206, 278, 311, 320, 402
BmsI GCATC 2 cut(s) 21, 543
BplI GAGNNNNNCTC 2 cut(s) 158, 190
BpmI CTGGAG 1 cut(s) 384
Bpu10I CCTNAGC 1 cut(s) 195
BpuMI CCSGG 2 cut(s) 206, 311
BsaAI YACGTR 1 cut(s) 658
BsaHI GRCGYC 1 cut(s) 392
BsaWI WCCGGW 1 cut(s) 134
BsaXI ACNNNNNCTCC 4 cut(s) 382, 412, 447, 477
Bsc4I CCNNNNNNNGG 6 cut(s) 134, 310, 331, 425, 439, 476
BseBI CCWGG 3 cut(s) 278, 320, 402
BseGI GGATG 4 cut(s) 273, 558, 694, 709
BseLI CCNNNNNNNGG 6 cut(s) 134, 310, 331, 425, 439, 476
BseMII CTCAG 2 cut(s) 126, 209
BseRI GAGGAG 3 cut(s) 183, 254, 257
BseXI GCAGC 1 cut(s) 427
Bsh1285I CGRYCG 1 cut(s) 304
BshFI GGCC 2 cut(s) 462, 506
BsiEI CGRYCG 1 cut(s) 304
BsiHKCI CYCGRG 3 cut(s) 77, 103, 128
BsiSI CCGG 5 cut(s) 135, 205, 311, 368, 419
BslI CCNNNNNNNGG 6 cut(s) 134, 310, 331, 425, 439, 476
BsmAI GTCTC 1 cut(s) 402
BsmBI CGTCTC 1 cut(s) 402
BsnI GGCC 2 cut(s) 462, 506
BsoBI CYCGRG 3 cut(s) 77, 103, 128
Bsp143I GATC 2 cut(s) 252, 315
BspACI CCGC 5 cut(s) 405, 507, 645, 650, 693
BspANI GGCC 2 cut(s) 462, 506
BspCNI CTCAG 2 cut(s) 125, 208
BspLI GGNNCC 2 cut(s) 139, 366
BspMI ACCTGC 1 cut(s) 128
BspPI GGATC 2 cut(s) 247, 310
BssMI GATC 2 cut(s) 252, 315
BssNI GRCGYC 1 cut(s) 392
Bst2UI CCWGG 3 cut(s) 278, 320, 402
Bst4CI ACNGT 4 cut(s) 145, 295, 305, 620
Bst6I CTCTTC 1 cut(s) 348
BstACI GRCGYC 1 cut(s) 392
BstBAI YACGTR 1 cut(s) 658
BstC8I GCNNGC 1 cut(s) 125
BstDEI CTNAG 2 cut(s) 112, 195
BstEII GGTNACC 1 cut(s) 428
BstENI CCTNNNNNAGG 1 cut(s) 437
BstF5I GGATG 4 cut(s) 273, 558, 694, 709
BstKTI GATC 2 cut(s) 255, 318
BstMAI GTCTC 1 cut(s) 402
BstMBI GATC 2 cut(s) 252, 315
BstMCI CGRYCG 1 cut(s) 304
BstNI CCWGG 3 cut(s) 278, 320, 402
BstPI GGTNACC 1 cut(s) 428
BstSCI CCNGG 5 cut(s) 204, 276, 309, 318, 400
BstSFI CTRYAG 1 cut(s) 737
BstV1I GCAGC 1 cut(s) 427
BsuRI GGCC 2 cut(s) 462, 506
BtsCI GGATG 4 cut(s) 273, 558, 694, 709
BveI ACCTGC 1 cut(s) 128
Cac8I GCNNGC 1 cut(s) 125
Cfr13I GGNCC 2 cut(s) 49, 322
Csp6I GTAC 1 cut(s) 655
CviJI RGCY 7 cut(s) 199, 250, 345, 418, 443, 462, 506
CviKI_1 RGCY 7 cut(s) 199, 250, 345, 418, 443, 462, 506
CviQI GTAC 1 cut(s) 655
DdeI CTNAG 2 cut(s) 112, 195
DpnI GATC 2 cut(s) 254, 317
DpnII GATC 2 cut(s) 252, 315
Eam1104I CTCTTC 1 cut(s) 348
EarI CTCTTC 1 cut(s) 348
EciI GGCGGA 1 cut(s) 665
Eco47I GGWCC 2 cut(s) 49, 322
Eco88I CYCGRG 3 cut(s) 77, 103, 128
Eco91I GGTNACC 1 cut(s) 428
EcoNI CCTNNNNNAGG 1 cut(s) 437
EcoO109I RGGNCCY 1 cut(s) 322
EcoO65I GGTNACC 1 cut(s) 428
EcoRII CCWGG 3 cut(s) 276, 318, 400
Esp3I CGTCTC 1 cut(s) 402
FaiI YATR 4 cut(s) 42, 69, 230, 639
FauI CCCGC 2 cut(s) 398, 638
FblI GTMKAC 1 cut(s) 210
Fnu4HI GCNGC 3 cut(s) 416, 507, 694
FokI GGATG 4 cut(s) 260, 565, 701, 716
Fsp4HI GCNGC 3 cut(s) 416, 507, 694
FspBI CTAG 2 cut(s) 437, 557
GluI GCNGC 3 cut(s) 416, 507, 694
GsuI CTGGAG 1 cut(s) 384
HaeIII GGCC 2 cut(s) 462, 506
HapII CCGG 5 cut(s) 135, 205, 311, 368, 419
Hin1I GRCGYC 1 cut(s) 392
HincII GTYRAC 3 cut(s) 100, 189, 211
HindII GTYRAC 3 cut(s) 100, 189, 211
HindIII AAGCTT 1 cut(s) 343
HpaII CCGG 5 cut(s) 135, 205, 311, 368, 419
HphI GGTGA 2 cut(s) 181, 346
Hpy166II GTNNAC 4 cut(s) 100, 172, 189, 211
Hpy188III TCNNGA 1 cut(s) 437
Hpy8I GTNNAC 4 cut(s) 100, 172, 189, 211
Hpy99I CGWCG 6 cut(s) 394, 397, 415, 452, 455, 523
HpyAV CCTTC 1 cut(s) 443
HpyCH4III ACNGT 4 cut(s) 145, 295, 305, 620
HpyCH4IV ACGT 3 cut(s) 392, 518, 657
HpyF3I CTNAG 2 cut(s) 112, 195
HpySE526I ACGT 3 cut(s) 392, 518, 657
Hsp92I GRCGYC 1 cut(s) 392
Kzo9I GATC 2 cut(s) 252, 315
Lsp1109I GCAGC 1 cut(s) 427
LweI GCATC 2 cut(s) 21, 543
MaeI CTAG 2 cut(s) 437, 557
MaeII ACGT 3 cut(s) 392, 518, 657
MaeIII GTNAC 6 cut(s) 107, 115, 295, 305, 428, 620
MalI GATC 2 cut(s) 254, 317
MboI GATC 2 cut(s) 252, 315
MboII GAAGA 1 cut(s) 365
MluCI AATT 4 cut(s) 422, 583, 606, 634
MmeI TCCRAC 5 cut(s) 216, 471, 480, 494, 520
MseI TTAA 2 cut(s) 246, 339
MspA1I CMGCKG 1 cut(s) 509
MspI CCGG 5 cut(s) 135, 205, 311, 368, 419
MspR9I CCNGG 5 cut(s) 206, 278, 311, 320, 402
MvaI CCWGG 3 cut(s) 278, 320, 402
NciI CCSGG 2 cut(s) 206, 311
NdeII GATC 2 cut(s) 252, 315
NlaIV GGNNCC 2 cut(s) 139, 366
NmeAIII GCCGAG 1 cut(s) 438
NmuCI GTSAC 2 cut(s) 107, 305
PaeR7I CTCGAG 1 cut(s) 103
PcsI WCGNNNNNNNCGW 3 cut(s) 182, 216, 707
PfeI GAWTC 2 cut(s) 284, 722
PflFI GACNNNGTC 1 cut(s) 394
PfoI TCCNGGA 2 cut(s) 276, 318
PkrI GCNGC 3 cut(s) 417, 508, 695
Ppu21I YACGTR 1 cut(s) 658
PpuMI RGGWCCY 1 cut(s) 322
PsiI TTATAA 1 cut(s) 639
Psp5II RGGWCCY 1 cut(s) 322
Psp6I CCWGG 3 cut(s) 276, 318, 400
PspEI GGTNACC 1 cut(s) 428
PspGI CCWGG 3 cut(s) 276, 318, 400
PspN4I GGNNCC 2 cut(s) 139, 366
PspPI GGNCC 2 cut(s) 49, 322
PspPPI RGGWCCY 1 cut(s) 322
PspXI VCTCGAGB 1 cut(s) 103
PsyI GACNNNGTC 1 cut(s) 394
RsaI GTAC 1 cut(s) 656
RsaNI GTAC 1 cut(s) 655
SalI GTCGAC 1 cut(s) 209
SaqAI TTAA 2 cut(s) 246, 339
SatI GCNGC 3 cut(s) 416, 507, 694
Sau3AI GATC 2 cut(s) 252, 315
Sau96I GGNCC 2 cut(s) 49, 322
ScrFI CCNGG 5 cut(s) 206, 278, 311, 320, 402
SfaNI GCATC 2 cut(s) 21, 543
SfcI CTRYAG 1 cut(s) 737
Sfr274I CTCGAG 1 cut(s) 103
SinI GGWCC 2 cut(s) 49, 322
SlaI CTCGAG 1 cut(s) 103
SmlI CTYRAG 1 cut(s) 103
SmoI CTYRAG 1 cut(s) 103
Sse9I AATT 4 cut(s) 422, 583, 606, 634
SsiI CCGC 5 cut(s) 405, 507, 645, 650, 693
SspMI CTAG 2 cut(s) 437, 557
StyD4I CCNGG 5 cut(s) 204, 276, 309, 318, 400
TaaI ACNGT 4 cut(s) 145, 295, 305, 620
TaiI ACGT 3 cut(s) 395, 521, 660
TaqI TCGA 6 cut(s) 104, 150, 155, 210, 348, 521
TasI AATT 4 cut(s) 422, 583, 606, 634
TauI GCSGC 2 cut(s) 509, 696
TfiI GAWTC 2 cut(s) 284, 722
Tru1I TTAA 2 cut(s) 246, 339
Tru9I TTAA 2 cut(s) 246, 339
TseFI GTSAC 2 cut(s) 107, 305
TseI GCWGC 1 cut(s) 415
Tsp45I GTSAC 2 cut(s) 107, 305
TspGWI ACGGA 1 cut(s) 507
Tth111I GACNNNGTC 1 cut(s) 394
VpaK11BI GGWCC 2 cut(s) 49, 322
XagI CCTNNNNNAGG 1 cut(s) 437
XbaI TCTAGA 1 cut(s) 436
XhoI CTCGAG 1 cut(s) 103
XmiI GTMKAC 1 cut(s) 210
XspI CTAG 2 cut(s) 437, 557
ZraI GACGTC 1 cut(s) 393
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.