dnaJ homolog subfamily C member
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g13880 |
| rosa_chinensis | RchiOBHm_Chr7g0183051 |
| rosa_laevigata | RLG00000005083 |
| rosa_multiflora | Rmu_co8037088.1_g000001 Rmu_sc0000014.1_g000004 Rmu_ssc0000111.1_g000002 |
| rosa_roxburghii | Rroxscaffold_3G00270810 |
| rosa_rugosa | Rorug06G0452100 |
| rosa_samantha | Rh7AG055600 Rh7DG055100 |
| rosa_wichuraiana | Rw7G004520 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 616 |
| AccBSI | CCGCTC | 1 cut(s) | 635 |
| AccI | GTMKAC | 3 cut(s) | 30, 390, 1503 |
| AccII | CGCG | 2 cut(s) | 191, 286 |
| AccIII | TCCGGA | 1 cut(s) | 496 |
| AciI | CCGC | 9 cut(s) | 189, 210, 527, 530, 596, 635, 638, 649, 1229 |
| AcuI | CTGAAG | 2 cut(s) | 506, 1155 |
| AcvI | CACGTG | 1 cut(s) | 585 |
| AcyI | GRCGYC | 1 cut(s) | 617 |
| AfeI | AGCGCT | 1 cut(s) | 101 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 151, 338, 503, 526, 1484, 1643, 1644 |
| AflIII | ACRYGT | 1 cut(s) | 1062 |
| AgsI | TTSAA | 8 cut(s) | 316, 385, 407, 437, 820, 964, 985, 1039 |
| AjiI | CACGTC | 1 cut(s) | 1063 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1034, 1066 |
| AluBI | AGCT | 6 cut(s) | 226, 312, 451, 1093, 1117, 1133 |
| AluI | AGCT | 6 cut(s) | 226, 312, 451, 1093, 1117, 1133 |
| Alw21I | GWGCWC | 2 cut(s) | 45, 228 |
| Alw26I | GTCTC | 1 cut(s) | 1370 |
| Ama87I | CYCGRG | 1 cut(s) | 86 |
| Aor13HI | TCCGGA | 1 cut(s) | 496 |
| Aor51HI | AGCGCT | 1 cut(s) | 101 |
| AoxI | GGCC | 4 cut(s) | 166, 234, 322, 340 |
| ApeKI | GCWGC | 2 cut(s) | 451, 646 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 959 |
| AspLEI | GCGC | 4 cut(s) | 102, 288, 619, 715 |
| AspS9I | GGNCC | 1 cut(s) | 1634 |
| AsuC2I | CCSGG | 3 cut(s) | 146, 305, 321 |
| AsuHPI | GGTGA | 7 cut(s) | 16, 487, 652, 1208, 1322, 1499, 1598 |
| AvaI | CYCGRG | 1 cut(s) | 86 |
| AvaII | GGWCC | 1 cut(s) | 1634 |
| BanI | GGYRCC | 1 cut(s) | 616 |
| BanII | GRGCYC | 1 cut(s) | 228 |
| BbrPI | CACGTG | 1 cut(s) | 585 |
| BbsI | GAAGAC | 1 cut(s) | 69 |
| Bbv12I | GWGCWC | 2 cut(s) | 45, 228 |
| BbvI | GCAGC | 2 cut(s) | 438, 658 |
| BccI | CCATC | 9 cut(s) | 83, 583, 748, 826, 1009, 1024, 1069, 1252, 1324 |
| BceAI | ACGGC | 2 cut(s) | 144, 409 |
| BclI | TGATCA | 1 cut(s) | 1102 |
| BcnI | CCSGG | 3 cut(s) | 146, 305, 321 |
| BcoDI | GTCTC | 1 cut(s) | 1370 |
| BfaI | CTAG | 4 cut(s) | 326, 1181, 1268, 1284 |
| BfoI | RGCGCY | 2 cut(s) | 103, 620 |
| BisI | GCNGC | 5 cut(s) | 452, 528, 596, 636, 647 |
| BlsI | GCNGC | 5 cut(s) | 453, 529, 597, 637, 648 |
| Bme1390I | CCNGG | 3 cut(s) | 146, 305, 321 |
| Bme18I | GGWCC | 1 cut(s) | 1634 |
| BmeT110I | CYCGRG | 1 cut(s) | 86 |
| BmgBI | CACGTC | 1 cut(s) | 1063 |
| BmgT120I | GGNCC | 1 cut(s) | 1634 |
| BmiI | GGNNCC | 5 cut(s) | 594, 618, 858, 1635, 1636 |
| BmrFI | CCNGG | 3 cut(s) | 146, 305, 321 |
| BmsI | GCATC | 2 cut(s) | 252, 633 |
| BpiI | GAAGAC | 1 cut(s) | 69 |
| BpuMI | CCSGG | 3 cut(s) | 146, 305, 321 |
| BsaAI | YACGTR | 2 cut(s) | 40, 585 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1101, 1176 |
| BsaHI | GRCGYC | 1 cut(s) | 617 |
| BsaJI | CCNNGG | 4 cut(s) | 87, 257, 303, 1412 |
| BsaWI | WCCGGW | 3 cut(s) | 496, 1477, 1484 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 624, 654, 848, 878, 923, 953, 1411, 1441 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 151, 338, 503, 526, 1484, 1643, 1644 |
| Bse118I | RCCGGY | 3 cut(s) | 164, 874, 1601 |
| Bse3DI | GCAATG | 2 cut(s) | 1029, 1281 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1101, 1176 |
| BseAI | TCCGGA | 1 cut(s) | 496 |
| BseDI | CCNNGG | 4 cut(s) | 87, 257, 303, 1412 |
| BseGI | GGATG | 7 cut(s) | 75, 267, 594, 1093, 1267, 1363, 1396 |
| BseJI | GATNNNNATC | 2 cut(s) | 1101, 1176 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 151, 338, 503, 526, 1484, 1643, 1644 |
| BseMI | GCAATG | 2 cut(s) | 1029, 1281 |
| BseMII | CTCAG | 1 cut(s) | 358 |
| BseXI | GCAGC | 2 cut(s) | 438, 658 |
| BsgI | GTGCAG | 2 cut(s) | 557, 1419 |
| Bsh1236I | CGCG | 2 cut(s) | 191, 286 |
| BshFI | GGCC | 4 cut(s) | 168, 236, 324, 342 |
| BshNI | GGYRCC | 1 cut(s) | 616 |
| BsiHKAI | GWGCWC | 2 cut(s) | 45, 228 |
| BsiHKCI | CYCGRG | 1 cut(s) | 86 |
| BslFI | GGGAC | 4 cut(s) | 314, 521, 746, 1647 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 151, 338, 503, 526, 1484, 1643, 1644 |
| BsmAI | GTCTC | 1 cut(s) | 1370 |
| BsmFI | GGGAC | 4 cut(s) | 314, 521, 746, 1647 |
| BsmI | GAATGC | 1 cut(s) | 1169 |
| BsnI | GGCC | 4 cut(s) | 168, 236, 324, 342 |
| BsoBI | CYCGRG | 1 cut(s) | 86 |
| Bsp1286I | GDGCHC | 2 cut(s) | 45, 228 |
| Bsp13I | TCCGGA | 1 cut(s) | 496 |
| Bsp143I | GATC | 2 cut(s) | 243, 1102 |
| Bsp19I | CCATGG | 1 cut(s) | 257 |
| BspACI | CCGC | 9 cut(s) | 189, 210, 527, 530, 596, 635, 638, 649, 1229 |
| BspANI | GGCC | 4 cut(s) | 168, 236, 324, 342 |
| BspCNI | CTCAG | 1 cut(s) | 357 |
| BspEI | TCCGGA | 1 cut(s) | 496 |
| BspFNI | CGCG | 2 cut(s) | 191, 286 |
| BspHI | TCATGA | 1 cut(s) | 246 |
| BspLI | GGNNCC | 5 cut(s) | 594, 618, 858, 1635, 1636 |
| BspT107I | GGYRCC | 1 cut(s) | 616 |
| BsrBI | CCGCTC | 1 cut(s) | 635 |
| BsrDI | GCAATG | 2 cut(s) | 1029, 1281 |
| BsrFI | RCCGGY | 3 cut(s) | 164, 874, 1601 |
| BssAI | RCCGGY | 3 cut(s) | 164, 874, 1601 |
| BssECI | CCNNGG | 4 cut(s) | 87, 257, 303, 1412 |
| BssMI | GATC | 2 cut(s) | 243, 1102 |
| BssNI | GRCGYC | 1 cut(s) | 617 |
| BssT1I | CCWWGG | 1 cut(s) | 257 |
| Bst4CI | ACNGT | 1 cut(s) | 571 |
| BstACI | GRCGYC | 1 cut(s) | 617 |
| BstBAI | YACGTR | 2 cut(s) | 40, 585 |
| BstC8I | GCNNGC | 2 cut(s) | 166, 267 |
| BstDEI | CTNAG | 2 cut(s) | 46, 344 |
| BstDSI | CCRYGG | 1 cut(s) | 257 |
| BstF5I | GGATG | 7 cut(s) | 75, 267, 594, 1093, 1267, 1363, 1396 |
| BstFNI | CGCG | 2 cut(s) | 191, 286 |
| BstH2I | RGCGCY | 2 cut(s) | 103, 620 |
| BstHHI | GCGC | 4 cut(s) | 102, 288, 619, 715 |
| BstKTI | GATC | 2 cut(s) | 246, 1105 |
| BstMAI | GTCTC | 1 cut(s) | 1370 |
| BstMBI | GATC | 2 cut(s) | 243, 1102 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 487, 1280 |
| BstSCI | CCNGG | 3 cut(s) | 144, 303, 319 |
| BstUI | CGCG | 2 cut(s) | 191, 286 |
| BstV1I | GCAGC | 2 cut(s) | 438, 658 |
| BstV2I | GAAGAC | 1 cut(s) | 69 |
| BsuRI | GGCC | 4 cut(s) | 168, 236, 324, 342 |
| BtgI | CCRYGG | 1 cut(s) | 257 |
| BtrI | CACGTC | 1 cut(s) | 1063 |
| BtsCI | GGATG | 7 cut(s) | 75, 267, 594, 1093, 1267, 1363, 1396 |
| BtsI | GCAGTG | 1 cut(s) | 983 |
| BtsIMutI | CAGTG | 1 cut(s) | 983 |
| Cac8I | GCNNGC | 2 cut(s) | 166, 267 |
| CciI | TCATGA | 1 cut(s) | 246 |
| CfoI | GCGC | 4 cut(s) | 102, 288, 619, 715 |
| Cfr10I | RCCGGY | 3 cut(s) | 164, 874, 1601 |
| Cfr13I | GGNCC | 1 cut(s) | 1634 |
| CseI | GACGC | 2 cut(s) | 292, 1489 |
| CviAII | CATG | 6 cut(s) | 247, 258, 599, 1106, 1370, 1454 |
| DdeI | CTNAG | 2 cut(s) | 46, 344 |
| DinI | GGCGCC | 1 cut(s) | 618 |
| DpnI | GATC | 2 cut(s) | 245, 1104 |
| DpnII | GATC | 2 cut(s) | 243, 1102 |
| EciI | GGCGGA | 1 cut(s) | 1244 |
| Ecl136II | GAGCTC | 1 cut(s) | 226 |
| Eco130I | CCWWGG | 1 cut(s) | 257 |
| Eco147I | AGGCCT | 2 cut(s) | 236, 342 |
| Eco24I | GRGCYC | 1 cut(s) | 228 |
| Eco47I | GGWCC | 1 cut(s) | 1634 |
| Eco47III | AGCGCT | 1 cut(s) | 101 |
| Eco53kI | GAGCTC | 1 cut(s) | 226 |
| Eco57I | CTGAAG | 2 cut(s) | 506, 1155 |
| Eco72I | CACGTG | 1 cut(s) | 585 |
| Eco88I | CYCGRG | 1 cut(s) | 86 |
| EcoICRI | GAGCTC | 1 cut(s) | 226 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1634 |
| EcoT14I | CCWWGG | 1 cut(s) | 257 |
| EcoT38I | GRGCYC | 1 cut(s) | 228 |
| EgeI | GGCGCC | 1 cut(s) | 618 |
| EheI | GGCGCC | 1 cut(s) | 618 |
| ErhI | CCWWGG | 1 cut(s) | 257 |
| FaeI | CATG | 6 cut(s) | 250, 261, 602, 1109, 1373, 1457 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 365, 397, 965, 997 |
| FaqI | GGGAC | 4 cut(s) | 314, 521, 746, 1647 |
| FatI | CATG | 6 cut(s) | 246, 257, 598, 1105, 1369, 1453 |
| FbaI | TGATCA | 1 cut(s) | 1102 |
| FblI | GTMKAC | 3 cut(s) | 30, 390, 1503 |
| Fnu4HI | GCNGC | 5 cut(s) | 452, 528, 596, 636, 647 |
| FokI | GGATG | 7 cut(s) | 62, 274, 601, 1100, 1274, 1370, 1403 |
| FriOI | GRGCYC | 1 cut(s) | 228 |
| Fsp4HI | GCNGC | 5 cut(s) | 452, 528, 596, 636, 647 |
| FspBI | CTAG | 4 cut(s) | 326, 1181, 1268, 1284 |
| GlaI | GCGC | 4 cut(s) | 101, 287, 618, 714 |
| GluI | GCNGC | 5 cut(s) | 452, 528, 596, 636, 647 |
| HaeII | RGCGCY | 2 cut(s) | 103, 620 |
| HaeIII | GGCC | 4 cut(s) | 168, 236, 324, 342 |
| HgaI | GACGC | 2 cut(s) | 292, 1489 |
| HhaI | GCGC | 4 cut(s) | 102, 288, 619, 715 |
| Hin1I | GRCGYC | 1 cut(s) | 617 |
| Hin1II | CATG | 6 cut(s) | 250, 261, 602, 1109, 1373, 1457 |
| Hin6I | GCGC | 4 cut(s) | 100, 286, 617, 713 |
| HinP1I | GCGC | 4 cut(s) | 100, 286, 617, 713 |
| HincII | GTYRAC | 2 cut(s) | 31, 1504 |
| HindII | GTYRAC | 2 cut(s) | 31, 1504 |
| HindIII | AAGCTT | 1 cut(s) | 310 |
| HinfI | GANTC | 8 cut(s) | 138, 348, 378, 461, 985, 1443, 1481, 1493 |
| HphI | GGTGA | 7 cut(s) | 16, 487, 652, 1208, 1322, 1499, 1598 |
| Hpy166II | GTNNAC | 5 cut(s) | 31, 391, 867, 1313, 1504 |
| Hpy188I | TCNGA | 6 cut(s) | 337, 347, 364, 466, 613, 993 |
| Hpy188III | TCNNGA | 7 cut(s) | 247, 437, 497, 565, 964, 1058, 1181 |
| Hpy8I | GTNNAC | 5 cut(s) | 31, 391, 867, 1313, 1504 |
| Hpy99I | CGWCG | 5 cut(s) | 368, 401, 571, 625, 1505 |
| HpyCH4III | ACNGT | 1 cut(s) | 571 |
| HpyCH4IV | ACGT | 5 cut(s) | 39, 399, 584, 657, 1062 |
| HpyCH4V | TGCA | 4 cut(s) | 538, 646, 1400, 1643 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 487, 1280 |
| HpyF3I | CTNAG | 2 cut(s) | 46, 344 |
| HpySE526I | ACGT | 5 cut(s) | 39, 399, 584, 657, 1062 |
| Hsp92I | GRCGYC | 1 cut(s) | 617 |
| Hsp92II | CATG | 6 cut(s) | 250, 261, 602, 1109, 1373, 1457 |
| HspAI | GCGC | 4 cut(s) | 100, 286, 617, 713 |
| KasI | GGCGCC | 1 cut(s) | 616 |
| KflI | GGGWCCC | 1 cut(s) | 1634 |
| Kpn2I | TCCGGA | 1 cut(s) | 496 |
| KroI | GCCGGC | 1 cut(s) | 164 |
| KroNI | GCCGGC | 1 cut(s) | 166 |
| Ksp22I | TGATCA | 1 cut(s) | 1102 |
| Kzo9I | GATC | 2 cut(s) | 243, 1102 |
| LmnI | GCTCC | 7 cut(s) | 231, 448, 592, 632, 856, 1366, 1560 |
| Lsp1109I | GCAGC | 2 cut(s) | 438, 658 |
| LweI | GCATC | 2 cut(s) | 252, 633 |
| MaeI | CTAG | 4 cut(s) | 326, 1181, 1268, 1284 |
| MaeII | ACGT | 5 cut(s) | 39, 399, 584, 657, 1062 |
| MalI | GATC | 2 cut(s) | 245, 1104 |
| MbiI | CCGCTC | 1 cut(s) | 635 |
| MboI | GATC | 2 cut(s) | 243, 1102 |
| MhlI | GDGCHC | 2 cut(s) | 45, 228 |
| MluCI | AATT | 2 cut(s) | 547, 1317 |
| Mly113I | GGCGCC | 1 cut(s) | 617 |
| MlyI | GAGTC | 1 cut(s) | 455 |
| MmeI | TCCRAC | 5 cut(s) | 36, 79, 387, 591, 1047 |
| MroI | TCCGGA | 1 cut(s) | 496 |
| MroNI | GCCGGC | 1 cut(s) | 164 |
| MroXI | GAANNNNTTC | 1 cut(s) | 959 |
| MseI | TTAA | 2 cut(s) | 558, 1681 |
| MslI | CAYNNNNRTG | 2 cut(s) | 587, 1110 |
| MspA1I | CMGCKG | 1 cut(s) | 649 |
| MspR9I | CCNGG | 3 cut(s) | 146, 305, 321 |
| Mva1269I | GAATGC | 1 cut(s) | 1169 |
| MvnI | CGCG | 2 cut(s) | 191, 286 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 487, 1280 |
| NaeI | GCCGGC | 1 cut(s) | 166 |
| NarI | GGCGCC | 1 cut(s) | 617 |
| NciI | CCSGG | 3 cut(s) | 146, 305, 321 |
| NcoI | CCATGG | 1 cut(s) | 257 |
| NdeII | GATC | 2 cut(s) | 243, 1102 |
| NgoMIV | GCCGGC | 1 cut(s) | 164 |
| NlaIII | CATG | 6 cut(s) | 250, 261, 602, 1109, 1373, 1457 |
| NlaIV | GGNNCC | 5 cut(s) | 594, 618, 858, 1635, 1636 |
| NmeAIII | GCCGAG | 1 cut(s) | 295 |
| PagI | TCATGA | 1 cut(s) | 246 |
| PceI | AGGCCT | 2 cut(s) | 236, 342 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 36, 617 |
| PctI | GAATGC | 1 cut(s) | 1169 |
| PdiI | GCCGGC | 1 cut(s) | 166 |
| PdmI | GAANNNNTTC | 1 cut(s) | 959 |
| PfeI | GAWTC | 7 cut(s) | 138, 348, 378, 985, 1443, 1481, 1493 |
| PflFI | GACNNNGTC | 1 cut(s) | 152 |
| PkrI | GCNGC | 5 cut(s) | 453, 529, 597, 637, 648 |
| PleI | GAGTC | 1 cut(s) | 455 |
| PluTI | GGCGCC | 1 cut(s) | 620 |
| PmaCI | CACGTG | 1 cut(s) | 585 |
| PmlI | CACGTG | 1 cut(s) | 585 |
| PpsI | GAGTC | 1 cut(s) | 455 |
| Ppu21I | YACGTR | 2 cut(s) | 40, 585 |
| PpuMI | RGGWCCY | 1 cut(s) | 1634 |
| Psp124BI | GAGCTC | 1 cut(s) | 228 |
| Psp5II | RGGWCCY | 1 cut(s) | 1634 |
| PspCI | CACGTG | 1 cut(s) | 585 |
| PspN4I | GGNNCC | 5 cut(s) | 594, 618, 858, 1635, 1636 |
| PspPI | GGNCC | 1 cut(s) | 1634 |
| PspPPI | RGGWCCY | 1 cut(s) | 1634 |
| PsyI | GACNNNGTC | 1 cut(s) | 152 |
| RseI | CAYNNNNRTG | 2 cut(s) | 587, 1110 |
| SacI | GAGCTC | 1 cut(s) | 228 |
| SalI | GTCGAC | 2 cut(s) | 29, 1502 |
| SaqAI | TTAA | 2 cut(s) | 558, 1681 |
| SatI | GCNGC | 5 cut(s) | 452, 528, 596, 636, 647 |
| Sau3AI | GATC | 2 cut(s) | 243, 1102 |
| Sau96I | GGNCC | 1 cut(s) | 1634 |
| SchI | GAGTC | 1 cut(s) | 455 |
| ScrFI | CCNGG | 3 cut(s) | 146, 305, 321 |
| SduI | GDGCHC | 2 cut(s) | 45, 228 |
| SfaNI | GCATC | 2 cut(s) | 252, 633 |
| SfoI | GGCGCC | 1 cut(s) | 618 |
| SinI | GGWCC | 1 cut(s) | 1634 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 587, 1110 |
| Sse9I | AATT | 2 cut(s) | 547, 1317 |
| SseBI | AGGCCT | 2 cut(s) | 236, 342 |
| SsiI | CCGC | 9 cut(s) | 189, 210, 527, 530, 596, 635, 638, 649, 1229 |
| SspDI | GGCGCC | 1 cut(s) | 616 |
| SspMI | CTAG | 4 cut(s) | 326, 1181, 1268, 1284 |
| SstI | GAGCTC | 1 cut(s) | 228 |
| StuI | AGGCCT | 2 cut(s) | 236, 342 |
| StyD4I | CCNGG | 3 cut(s) | 144, 303, 319 |
| StyI | CCWWGG | 1 cut(s) | 257 |
| TaaI | ACNGT | 1 cut(s) | 571 |
| TaiI | ACGT | 5 cut(s) | 42, 402, 587, 660, 1065 |
| TaqI | TCGA | 8 cut(s) | 30, 69, 81, 108, 998, 1206, 1472, 1503 |
| TasI | AATT | 2 cut(s) | 547, 1317 |
| TauI | GCSGC | 3 cut(s) | 530, 598, 638 |
| TfiI | GAWTC | 7 cut(s) | 138, 348, 378, 985, 1443, 1481, 1493 |
| Tru1I | TTAA | 2 cut(s) | 558, 1681 |
| Tru9I | TTAA | 2 cut(s) | 558, 1681 |
| TscAI | CASTG | 1 cut(s) | 983 |
| TseI | GCWGC | 2 cut(s) | 451, 646 |
| TspDTI | ATGAA | 5 cut(s) | 263, 458, 1188, 1230, 1464 |
| TspRI | CASTG | 1 cut(s) | 983 |
| Tth111I | GACNNNGTC | 1 cut(s) | 152 |
| VpaK11BI | GGWCC | 1 cut(s) | 1634 |
| XbaI | TCTAGA | 1 cut(s) | 1180 |
| XmiI | GTMKAC | 3 cut(s) | 30, 390, 1503 |
| XmnI | GAANNNNTTC | 1 cut(s) | 959 |
| XspI | CTAG | 4 cut(s) | 326, 1181, 1268, 1284 |