Rroxscaffold_3G00270810

dnaJ homolog subfamily C member

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0018041
Physical Location & Seq
Forward (+)
63301991 .. 63303682
1692 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00270810.1

Sequence Viewer

Length: 1692 bp
ATGGTGAAGTTCAACCAGCGCTTCGACTACTACGAGCTCTTAGGCATCGAACCGGAAGACCTCTTAGACCTGGACCTCCACGACGCAGAACGCTATGTTGAAAAGGCTTACAAAGAAACGGCGAGGAGAATCCACCCGGACAAAGTCAGAGTCACCGGCCTGAGCGAAGCCGAAGCCAAAGAGAAACAAGACGAAGCCACCGCAAAGTTCCAAGAGCTCCAAAAGGCCTACGACGTCATCAAAGACCCCATGCAGAGAGCCGGCTATGACTTGTACCGCAAGAAAAACTTCACTCCGGAAACTTTCAAACCCAACCTCGTGCCCACCGAGGGCCTCAGATTCTCCGGCTACTCCAACGAGGGCCGGGGATTCTTCAAGGTCTACGGTGACGTTTTTGAGAAGATATACGCCAACGAGGTTGCTTTTCAAGAGGAGAAGAAGTTGCCGCCGGATTCAGTGATCAAGCCGCCGGAGATAGGGGACGAACACAGACCCTATCCGGCGGTGGTGCAGTTCTACAACTACTGGCTCAACTTTGGGACCATAATGGACTTCACGTGGGAGGATCCGCACGACGAGTACGACTTGGCAGCGGCGCCTTCCAATAAGGTAGGGGCGATGATGGAGAGGAAGAACATAAAGGCCAGGAAGAGGGCTAAGAATGAGTATAATAATAAAGTGAGGAGGTTGGCGCAGAATGTGAGGAGGAGGGACATTAGGGTTTTGGAGATGATGGCGCACAGGGCCGAGGAGAGGAAGAAGGAGATGGAGGAGGAGAAGGAGAGGAGGAGGAGGTTGAAGAAGGAGAAGATGGAGAAGGCTTTGGAGTATGAGGAGCCGGAGTGGACGAAGCCGGTGGAGAGGAAGAGGAAGTATGGTGTGAAGGAGAAGGAGGAAGAGGAGAGGGAGGAATGGGAGTGCGTGGTGTGTAGGAAGGAGTTTAAGAGCGAGAAGCAGTGCTTGAATCACGAGATGTCTAAGAAGCATAGGGATATGGTAGCAGTGTTGGTGGGGTTGAAGCACCGCGATTTGGTTGAGGAGGTCTTGGAGTTGATGGAGGAGGAGGGAGATGAGGATAAGGAACTTGAGCATGATGGTGTAGATGAGGTTTTGGAGGGAGAAAGTGAAGAAGAAAGGGAGAGTGAGAGTGAAGATGAGGTATCCGAACGTGTTGATGAAAATCCGAAAGAAGACGTTGGTGAAGAAGTTGTTGATGGTGATGAAGAGGAAGAAGAGGATAAGGAGGATGATGAGATGGAAGTTCTTCAAGCAATGGTGGCGAGGCGAAAGACTAGTGTAAAAGTTGGTGAACCAATTTTTGAGCCCATGGCAACCATCAGTGATGTAGAGGAGGATGAGGTGGATATGGAGCACGAGGAGACAAAGAACACGGATAAGAATGGAGGAGAGAAGAAACAGAGGAGGAGGAGGAGGAGGAGTGTGAAGAGTACTAGAATCAATGAACATGATGATAAGAAGGAATCAAAATCGGATTCTAGTGCGGAATCTTGCGTTGACAATGGGAGTGAAGATGAGCAGAAGAGAAAGAAGGGAGGGAAGAAAGAGAAGAGGAGTAAAAGGAATACCAAAAGTAATGTTGAGAGTGAGGATTCTGGTGTAAAGAATTCCAAGTCTAGTAATAGGATAAGGTATGGAGGGAAGAAGAGTAGAGGTGATTTTGCCAAACATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DnaJ zf-C2H2_jaz

Protein Analysis

563

Amino Acids

66.35

Weight (kDa)

5.23

Isoelectric Point (pI)

56.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DnaJ PF00226 9 - 90 6.4e-11 DnaJ domain
ZUO1-like_ZHD PF21884 124 - 241 8.4e-15 Zuotin-like, zuotin homology domain
zf-C2H2_jaz PF12171 305 - 330 5.2e-06 Zinc-finger double-stranded RNA-binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0018041)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g13880
rosa_chinensis RchiOBHm_Chr7g0183051
rosa_laevigata RLG00000005083
rosa_multiflora Rmu_co8037088.1_g000001 Rmu_sc0000014.1_g000004 Rmu_ssc0000111.1_g000002
rosa_roxburghii Rroxscaffold_3G00270810
rosa_rugosa Rorug06G0452100
rosa_samantha Rh7AG055600 Rh7DG055100
rosa_wichuraiana Rw7G004520

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 237
AccB1I GGYRCC 1 cut(s) 595
AccI GTMKAC 1 cut(s) 381
AccII CGCG 1 cut(s) 1026
AccIII TCCGGA 1 cut(s) 295
AciI CCGC 9 cut(s) 201, 277, 446, 467, 503, 569, 593, 1024, 1502
AclWI GGATC 2 cut(s) 560, 573
AcsI RAATTY 1 cut(s) 1624
AcvI CACGTG 1 cut(s) 558
AcyI GRCGYC 2 cut(s) 234, 596
AfaI GTAC 3 cut(s) 275, 581, 1450
AfeI AGCGCT 1 cut(s) 20
AfiI CCNNNNNNNGG 5 cut(s) 329, 476, 651, 753, 1030
AflIII ACRYGT 1 cut(s) 1168
AgsI TTSAA 9 cut(s) 13, 101, 307, 376, 428, 799, 964, 1018, 1268
AhlI ACTAGT 1 cut(s) 1292
AjnI CCWGG 2 cut(s) 69, 644
AluBI AGCT 2 cut(s) 37, 217
AluI AGCT 2 cut(s) 37, 217
Alw21I GWGCWC 3 cut(s) 39, 219, 1374
Alw26I GTCTC 1 cut(s) 1373
AlwI GGATC 2 cut(s) 560, 573
Aor13HI TCCGGA 1 cut(s) 295
Aor51HI AGCGCT 1 cut(s) 20
AoxI GGCC 6 cut(s) 157, 225, 331, 361, 642, 744
ApeKI GCWGC 1 cut(s) 590
ApoI RAATTY 1 cut(s) 1624
ArsI GACNNNNNNTTYG 2 cut(s) 135, 167
Asp700I GAANNNNTTC 2 cut(s) 287, 1263
AspLEI GCGC 4 cut(s) 21, 598, 694, 739
AspS9I GGNCC 5 cut(s) 73, 331, 361, 540, 744
AsuC2I CCSGG 2 cut(s) 137, 365
AsuHPI GGTGA 7 cut(s) 16, 145, 398, 1211, 1229, 1319, 1685
AvaII GGWCC 2 cut(s) 73, 540
BaeGI GKGCMC 1 cut(s) 324
BamHI GGATCC 1 cut(s) 565
BanI GGYRCC 1 cut(s) 595
BanII GRGCYC 3 cut(s) 39, 219, 1326
BauI CACGAG 3 cut(s) 317, 968, 1373
BbrPI CACGTG 1 cut(s) 558
BbsI GAAGAC 2 cut(s) 63, 1197
Bbv12I GWGCWC 3 cut(s) 39, 219, 1374
BbvI GCAGC 1 cut(s) 602
BccI CCATC 9 cut(s) 616, 727, 760, 805, 1048, 1088, 1208, 1249, 1343
BceAI ACGGC 1 cut(s) 135
BciT130I CCWGG 2 cut(s) 71, 646
BciVI GTATCC 1 cut(s) 1171
BclI TGATCA 1 cut(s) 459
BcnI CCSGG 2 cut(s) 137, 365
BcoDI GTCTC 1 cut(s) 1373
BcuI ACTAGT 1 cut(s) 1292
BfaI CTAG 4 cut(s) 1293, 1452, 1497, 1635
BfoI RGCGCY 2 cut(s) 22, 599
BfuI GTATCC 1 cut(s) 1171
BisI GCNGC 4 cut(s) 446, 467, 591, 594
BlsI GCNGC 4 cut(s) 447, 468, 592, 595
BmcAI AGTACT 1 cut(s) 1450
Bme1390I CCNGG 4 cut(s) 71, 137, 365, 646
Bme18I GGWCC 2 cut(s) 73, 540
BmgT120I GGNCC 5 cut(s) 73, 331, 361, 540, 744
BmiI GGNNCC 4 cut(s) 541, 567, 597, 837
BmrFI CCNGG 4 cut(s) 71, 137, 365, 646
BmsI GCATC 1 cut(s) 54
BpiI GAAGAC 2 cut(s) 63, 1197
Bpu10I CCTNAGC 1 cut(s) 161
BpuEI CTTGAG 1 cut(s) 1106
BpuMI CCSGG 2 cut(s) 137, 365
BsaAI YACGTR 1 cut(s) 558
BsaBI GATNNNNATC 1 cut(s) 1179
BsaHI GRCGYC 2 cut(s) 234, 596
BsaJI CCNNGG 4 cut(s) 327, 364, 747, 1326
BsaWI WCCGGW 2 cut(s) 52, 295
BsaXI ACNNNNNCTCC 6 cut(s) 425, 455, 827, 857, 1423, 1453
Bsc4I CCNNNNNNNGG 5 cut(s) 329, 476, 651, 753, 1030
Bse118I RCCGGY 3 cut(s) 155, 260, 853
Bse1I ACTGG 1 cut(s) 530
Bse3DI GCAATG 1 cut(s) 1278
Bse8I GATNNNNATC 1 cut(s) 1179
BseAI TCCGGA 1 cut(s) 295
BseBI CCWGG 2 cut(s) 71, 646
BseDI CCNNGG 4 cut(s) 327, 364, 747, 1326
BseGI GGATG 2 cut(s) 1252, 1360
BseJI GATNNNNATC 1 cut(s) 1179
BseLI CCNNNNNNNGG 5 cut(s) 329, 476, 651, 753, 1030
BseMI GCAATG 1 cut(s) 1278
BseMII CTCAG 2 cut(s) 152, 349
BseNI ACTGG 1 cut(s) 530
BseSI GKGCMC 1 cut(s) 324
BseXI GCAGC 1 cut(s) 602
BsgI GTGCAG 1 cut(s) 530
Bsh1236I CGCG 1 cut(s) 1026
BshFI GGCC 6 cut(s) 159, 227, 333, 363, 644, 746
BshNI GGYRCC 1 cut(s) 595
BsiHKAI GWGCWC 3 cut(s) 39, 219, 1374
BslFI GGGAC 3 cut(s) 494, 553, 725
BslI CCNNNNNNNGG 5 cut(s) 329, 476, 651, 753, 1030
BsmAI GTCTC 1 cut(s) 1373
BsmFI GGGAC 3 cut(s) 494, 553, 725
BsnI GGCC 6 cut(s) 159, 227, 333, 363, 644, 746
Bsp1286I GDGCHC 5 cut(s) 39, 219, 324, 1326, 1374
Bsp13I TCCGGA 1 cut(s) 295
Bsp143I GATC 2 cut(s) 459, 565
Bsp19I CCATGG 1 cut(s) 1326
BspACI CCGC 9 cut(s) 201, 277, 446, 467, 503, 569, 593, 1024, 1502
BspANI GGCC 6 cut(s) 159, 227, 333, 363, 644, 746
BspCNI CTCAG 2 cut(s) 153, 348
BspEI TCCGGA 1 cut(s) 295
BspFNI CGCG 1 cut(s) 1026
BspLI GGNNCC 4 cut(s) 541, 567, 597, 837
BspPI GGATC 2 cut(s) 560, 573
BspT107I GGYRCC 1 cut(s) 595
BsrDI GCAATG 1 cut(s) 1278
BsrFI RCCGGY 3 cut(s) 155, 260, 853
BsrI ACTGG 1 cut(s) 530
BssAI RCCGGY 3 cut(s) 155, 260, 853
BssECI CCNNGG 4 cut(s) 327, 364, 747, 1326
BssMI GATC 2 cut(s) 459, 565
BssNI GRCGYC 2 cut(s) 234, 596
BssSI CACGAG 3 cut(s) 317, 968, 1373
BssT1I CCWWGG 1 cut(s) 1326
Bst2BI CACGAG 3 cut(s) 317, 968, 1373
Bst2UI CCWGG 2 cut(s) 71, 646
Bst4CI ACNGT 1 cut(s) 386
Bst6I CTCTTC 9 cut(s) 644, 860, 891, 1218, 1227, 1439, 1535, 1562, 1658
BstACI GRCGYC 2 cut(s) 234, 596
BstBAI YACGTR 1 cut(s) 558
BstC8I GCNNGC 1 cut(s) 262
BstDEI CTNAG 6 cut(s) 40, 64, 161, 335, 657, 978
BstDSI CCRYGG 1 cut(s) 1326
BstF5I GGATG 2 cut(s) 1252, 1360
BstFNI CGCG 1 cut(s) 1026
BstH2I RGCGCY 2 cut(s) 22, 599
BstHHI GCGC 4 cut(s) 21, 598, 694, 739
BstKTI GATC 2 cut(s) 462, 568
BstMAI GTCTC 1 cut(s) 1373
BstMBI GATC 2 cut(s) 459, 565
BstMWI GCNNNNNNNGC 2 cut(s) 743, 1277
BstNI CCWGG 2 cut(s) 71, 646
BstSCI CCNGG 4 cut(s) 69, 135, 363, 644
BstSLI GKGCMC 1 cut(s) 324
BstUI CGCG 1 cut(s) 1026
BstV1I GCAGC 1 cut(s) 602
BstV2I GAAGAC 2 cut(s) 63, 1197
BstX2I RGATCY 1 cut(s) 565
BstYI RGATCY 1 cut(s) 565
BsuI GTATCC 1 cut(s) 1171
BsuRI GGCC 6 cut(s) 159, 227, 333, 363, 644, 746
BtgI CCRYGG 1 cut(s) 1326
BtgZI GCGATG 1 cut(s) 632
BtsCI GGATG 2 cut(s) 1252, 1360
BtsI GCAGTG 2 cut(s) 962, 1008
BtsIMutI CAGTG 4 cut(s) 462, 962, 1008, 1345
Cac8I GCNNGC 1 cut(s) 262
CfoI GCGC 4 cut(s) 21, 598, 694, 739
Cfr10I RCCGGY 3 cut(s) 155, 260, 853
Cfr13I GGNCC 5 cut(s) 73, 331, 361, 540, 744
CseI GACGC 1 cut(s) 92
Csp6I GTAC 3 cut(s) 274, 580, 1449
CviAII CATG 4 cut(s) 250, 1091, 1327, 1466
CviQI GTAC 3 cut(s) 274, 580, 1449
DdeI CTNAG 6 cut(s) 40, 64, 161, 335, 657, 978
DinI GGCGCC 1 cut(s) 597
DpnI GATC 2 cut(s) 461, 567
DpnII GATC 2 cut(s) 459, 565
Eam1104I CTCTTC 9 cut(s) 644, 860, 891, 1218, 1227, 1439, 1535, 1562, 1658
EarI CTCTTC 9 cut(s) 644, 860, 891, 1218, 1227, 1439, 1535, 1562, 1658
Ecl136II GAGCTC 2 cut(s) 37, 217
Eco130I CCWWGG 1 cut(s) 1326
Eco147I AGGCCT 1 cut(s) 227
Eco24I GRGCYC 3 cut(s) 39, 219, 1326
Eco47I GGWCC 2 cut(s) 73, 540
Eco47III AGCGCT 1 cut(s) 20
Eco53kI GAGCTC 2 cut(s) 37, 217
Eco72I CACGTG 1 cut(s) 558
EcoICRI GAGCTC 2 cut(s) 37, 217
EcoO109I RGGNCCY 1 cut(s) 331
EcoRI GAATTC 1 cut(s) 1624
EcoRII CCWGG 2 cut(s) 69, 644
EcoT14I CCWWGG 1 cut(s) 1326
EcoT38I GRGCYC 3 cut(s) 39, 219, 1326
EgeI GGCGCC 1 cut(s) 597
EheI GGCGCC 1 cut(s) 597
ErhI CCWWGG 1 cut(s) 1326
FaeI CATG 4 cut(s) 253, 1094, 1330, 1469
FalI AAGNNNNNCTT 4 cut(s) 272, 304, 944, 976
FaqI GGGAC 3 cut(s) 494, 553, 725
FatI CATG 4 cut(s) 249, 1090, 1326, 1465
FbaI TGATCA 1 cut(s) 459
FblI GTMKAC 1 cut(s) 381
Fnu4HI GCNGC 4 cut(s) 446, 467, 591, 594
FokI GGATG 2 cut(s) 1259, 1367
FriOI GRGCYC 3 cut(s) 39, 219, 1326
Fsp4HI GCNGC 4 cut(s) 446, 467, 591, 594
FspBI CTAG 4 cut(s) 1293, 1452, 1497, 1635
GlaI GCGC 4 cut(s) 20, 597, 693, 738
GluI GCNGC 4 cut(s) 446, 467, 591, 594
HaeII RGCGCY 2 cut(s) 22, 599
HaeIII GGCC 6 cut(s) 159, 227, 333, 363, 644, 746
HgaI GACGC 1 cut(s) 92
HhaI GCGC 4 cut(s) 21, 598, 694, 739
Hin1I GRCGYC 2 cut(s) 234, 596
Hin1II CATG 4 cut(s) 253, 1094, 1330, 1469
Hin6I GCGC 4 cut(s) 19, 596, 692, 737
HinP1I GCGC 4 cut(s) 19, 596, 692, 737
HincII GTYRAC 1 cut(s) 1516
HindII GTYRAC 1 cut(s) 1516
HphI GGTGA 7 cut(s) 16, 145, 398, 1211, 1229, 1319, 1685
Hpy166II GTNNAC 4 cut(s) 382, 846, 1310, 1516
Hpy188I TCNGA 5 cut(s) 149, 338, 1165, 1185, 1492
Hpy188III TCNNGA 3 cut(s) 296, 428, 968
Hpy8I GTNNAC 4 cut(s) 382, 846, 1310, 1516
Hpy99I CGWCG 3 cut(s) 86, 236, 578
HpyCH4III ACNGT 1 cut(s) 386
HpyCH4IV ACGT 5 cut(s) 234, 390, 557, 1168, 1194
HpyCH4V TGCA 2 cut(s) 253, 511
HpyF10VI GCNNNNNNNGC 2 cut(s) 743, 1277
HpyF3I CTNAG 6 cut(s) 40, 64, 161, 335, 657, 978
HpySE526I ACGT 5 cut(s) 234, 390, 557, 1168, 1194
Hsp92I GRCGYC 2 cut(s) 234, 596
Hsp92II CATG 4 cut(s) 253, 1094, 1330, 1469
HspAI GCGC 4 cut(s) 19, 596, 692, 737
KasI GGCGCC 1 cut(s) 595
Kpn2I TCCGGA 1 cut(s) 295
KroI GCCGGC 1 cut(s) 260
KroNI GCCGGC 1 cut(s) 262
Ksp22I TGATCA 1 cut(s) 459
Kzo9I GATC 2 cut(s) 459, 565
LmnI GCTCC 3 cut(s) 222, 835, 1369
Lsp1109I GCAGC 1 cut(s) 602
LweI GCATC 1 cut(s) 54
MaeI CTAG 4 cut(s) 1293, 1452, 1497, 1635
MaeII ACGT 5 cut(s) 234, 390, 557, 1168, 1194
MaeIII GTNAC 2 cut(s) 151, 386
MalI GATC 2 cut(s) 461, 567
MboI GATC 2 cut(s) 459, 565
MflI RGATCY 1 cut(s) 565
MhlI GDGCHC 5 cut(s) 39, 219, 324, 1326, 1374
MluCI AATT 2 cut(s) 1314, 1624
Mly113I GGCGCC 1 cut(s) 596
MlyI GAGTC 1 cut(s) 159
MmeI TCCRAC 1 cut(s) 378
MroI TCCGGA 1 cut(s) 295
MroNI GCCGGC 1 cut(s) 260
MroXI GAANNNNTTC 2 cut(s) 287, 1263
MseI TTAA 2 cut(s) 942, 1690
MslI CAYNNNNRTG 1 cut(s) 1095
MspA1I CMGCKG 1 cut(s) 593
MspR9I CCNGG 4 cut(s) 71, 137, 365, 646
MvaI CCWGG 2 cut(s) 71, 646
MvnI CGCG 1 cut(s) 1026
MwoI GCNNNNNNNGC 2 cut(s) 743, 1277
NaeI GCCGGC 1 cut(s) 262
NarI GGCGCC 1 cut(s) 596
NciI CCSGG 2 cut(s) 137, 365
NcoI CCATGG 1 cut(s) 1326
NdeII GATC 2 cut(s) 459, 565
NgoMIV GCCGGC 1 cut(s) 260
NlaIII CATG 4 cut(s) 253, 1094, 1330, 1469
NlaIV GGNNCC 4 cut(s) 541, 567, 597, 837
NmeAIII GCCGAG 1 cut(s) 772
NmuCI GTSAC 2 cut(s) 151, 386
PceI AGGCCT 1 cut(s) 227
PcsI WCGNNNNNNNCGW 3 cut(s) 30, 324, 579
PdiI GCCGGC 1 cut(s) 262
PdmI GAANNNNTTC 2 cut(s) 287, 1263
PflFI GACNNNGTC 1 cut(s) 143
PkrI GCNGC 4 cut(s) 447, 468, 592, 595
PleI GAGTC 1 cut(s) 158
PluTI GGCGCC 1 cut(s) 599
PmaCI CACGTG 1 cut(s) 558
PmlI CACGTG 1 cut(s) 558
PpsI GAGTC 1 cut(s) 158
Ppu21I YACGTR 1 cut(s) 558
Psp124BI GAGCTC 2 cut(s) 39, 219
Psp6I CCWGG 2 cut(s) 69, 644
PspCI CACGTG 1 cut(s) 558
PspGI CCWGG 2 cut(s) 69, 644
PspN4I GGNNCC 4 cut(s) 541, 567, 597, 837
PspPI GGNCC 5 cut(s) 73, 331, 361, 540, 744
PsuI RGATCY 1 cut(s) 565
PsyI GACNNNGTC 1 cut(s) 143
RsaI GTAC 3 cut(s) 275, 581, 1450
RsaNI GTAC 3 cut(s) 274, 580, 1449
RseI CAYNNNNRTG 1 cut(s) 1095
SacI GAGCTC 2 cut(s) 39, 219
SaqAI TTAA 2 cut(s) 942, 1690
SatI GCNGC 4 cut(s) 446, 467, 591, 594
Sau3AI GATC 2 cut(s) 459, 565
Sau96I GGNCC 5 cut(s) 73, 331, 361, 540, 744
ScaI AGTACT 1 cut(s) 1450
SchI GAGTC 1 cut(s) 159
ScrFI CCNGG 4 cut(s) 71, 137, 365, 646
SduI GDGCHC 5 cut(s) 39, 219, 324, 1326, 1374
SfaNI GCATC 1 cut(s) 54
SfoI GGCGCC 1 cut(s) 597
SinI GGWCC 2 cut(s) 73, 540
SmiMI CAYNNNNRTG 1 cut(s) 1095
SmlI CTYRAG 1 cut(s) 1085
SmoI CTYRAG 1 cut(s) 1085
SpeI ACTAGT 1 cut(s) 1292
Sse9I AATT 2 cut(s) 1314, 1624
SseBI AGGCCT 1 cut(s) 227
SsiI CCGC 9 cut(s) 201, 277, 446, 467, 503, 569, 593, 1024, 1502
SspDI GGCGCC 1 cut(s) 595
SspMI CTAG 4 cut(s) 1293, 1452, 1497, 1635
SstI GAGCTC 2 cut(s) 39, 219
StuI AGGCCT 1 cut(s) 227
StyD4I CCNGG 4 cut(s) 69, 135, 363, 644
StyI CCWWGG 1 cut(s) 1326
TaaI ACNGT 1 cut(s) 386
TaiI ACGT 5 cut(s) 237, 393, 560, 1171, 1197
TaqI TCGA 2 cut(s) 24, 48
TasI AATT 2 cut(s) 1314, 1624
TatI WGTACW 1 cut(s) 1448
TauI GCSGC 3 cut(s) 448, 469, 596
Tru1I TTAA 2 cut(s) 942, 1690
Tru9I TTAA 2 cut(s) 942, 1690
TscAI CASTG 4 cut(s) 462, 962, 1008, 1345
TseFI GTSAC 2 cut(s) 151, 386
TseI GCWGC 1 cut(s) 590
Tsp45I GTSAC 2 cut(s) 151, 386
TspDTI ATGAA 3 cut(s) 1191, 1236, 1476
TspGWI ACGGA 1 cut(s) 1406
TspRI CASTG 4 cut(s) 462, 962, 1008, 1345
Tth111I GACNNNGTC 1 cut(s) 143
VpaK11BI GGWCC 2 cut(s) 73, 540
XapI RAATTY 1 cut(s) 1624
XmiI GTMKAC 1 cut(s) 381
XmnI GAANNNNTTC 2 cut(s) 287, 1263
XspI CTAG 4 cut(s) 1293, 1452, 1497, 1635
ZraI GACGTC 1 cut(s) 235
ZrmI AGTACT 1 cut(s) 1450
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.