FvH4_5g17930

Protein kinase domain

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Forward (+)
10285367 .. 10292940
7574 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g17930.t3

Sequence Viewer

Length: 3549 bp
ATGGCGGAGTCGAACTCGGTTGATGTCATTCTTGACTTTCTGCGGAAGAATAGGTTTTCAAGAGCTGAGGCAGCTCTTCGCAGTGAGCTTGGTAATCGTCCTGATTTGAATGGTTTCCTTGAGAAGCTTACTATTGAAGAGAAGGACTCTGGTAATTTGTTGGAAGCTGAAAAGGGGGACAAACTGGTGGTGGACAGTCAAGGGCTGGGATCACGGAACGGTGGTGAGGAACTTATAGTGAAAGAGATAGAATGTGGAACTGGAAGAAATGGGTCTGAAATCAAATGGAAGAATGCTGCTTCTGTTGGGGAACGAAATAAACCGGTTGAGGTGGCTGGGACTAATCACAAGAGCTTCGCATTCTCCAAAGGTTTAGAGGATACTGTGCTTGATTTATATTCATGGAAGATCAATCCAAGCAATGGTCCTGCTGAACCTTATCAAAATGATGGTGTTGCTGTTAAGTCTAACCACCCAGAGCCTCAGATATTGCAACAATCAAGGAATCATTCTGTGGACATTCCTGATTCTGGTAAAAGCACTCTGAAATCTGGAGAAGAGAGTAGCTTTTCTGGTGAGAAGAAAACTTCATGGCCTGGAAGTACTAGCAAAACCAGTGTGGAAAGCAAGTACGATAGAACTCAAACAAGTGAACCTAAGGAACTTGACCAACAACTTAAGAATAGTACCACGTACTTCAAAGAAAACTTTGCGGATAATCCATGGTCAAGAGTTGAAGAACCGACCAGTTCATCATCAGAGACGTGGAAAGATTGTTCTGTCAAGACTGTATTTCCTTTTCCCAAAGGGGATATGTCAACAAGTTATGATAGTGCTTCTGGTTCTGATAAAAAAGAAGGAAAGAGAAAAGCGCAGCTGACTGATACTAGGGCAGCAATAAAGGAGCAGGAGAATGAGGTGGCAAGAGCTTTATACTTGGGCAAGTCACAAGGGAGTTCTGAGCAAAAGACAATTAGTAGCTTGGTTTTTCCTATATTGTCTGAGAATCAGAAAGAAGAGTTTCCGAGGTTGCCACCAGTAAAGCTCAAGTCAGAGGACAAACCACTGACTGTTAACTGGGAGGAAAAGTTTGAGCGAGACGGGCCTGGTGCAAAACTCAGTGCTGCCGACAATGCCCATCTTATTGGGGCATATTTGGATGTCCCTTTTGGACAAGAAATAAGCTCTTCAGGTCCAGGTGGAAAAAGGAATGTAGGAGGAGGTAGTTGGCTGTCTGTAAGTCAGGGAATTGCAGAAGATACATCTGATCTGGTTTCTGGTTTCGCTACTGTTGGTGATGGACTGAGTGAAGATTACCCAAACGAGTACTGGGATTCTGATGAATATGATGATGATGATGATGTGGGATATATGAGACAACCTATTGAAGATGAGGCCTGGTTCCTGGCTCACGAAATTGATTACCCAAGTGACAATGAAAAAGGAGCAGGGCATGGGAGTGTTCCAGATCCGCAGGAAAGAGGCCCAACCAAAGATGAGGATGATGATCAATCTTTTGCTGAAGAGGATTCTTACTTTTCTGGTGAGCGCTACTTTCAAGGGAAAAATGTTGAACCAGTTACAGATGATCCTATGGGAATTACAGTGACTGAGTTGTATGGGAGGACTGATGAGAATGATTTAATAGCTCAATATGATGGACAGTTGATGGATGAAGAGGAACTGAATTTGATGCGTGCAGAACCTGTCTGGCAGGGATTTGTCACTCAGACTAATGAACTCATTATGTTAGGGGATGGGAAAGTTATGAATGAGTTGGGAAGGCCACGTCTGGATGATGTTTGTGTGGAGGATGACCAGCTTGGTTCAGTGAGATCAATTGGTGTGGGGATCAACAGTGATGTTGCTGAAATGGGCAGTGAAGTACGAGAAAGTTTGGTTGGAGGTAGTAGTGAAGGAGATTTAGAGTACTTCCGTGACCATGATGAAGGAATTGGTGGGTCTCGGAAGCCTCATCATGACTCGGACAAAAAACATATTGATAGATCTAACAGGGACAAAAAGAAAAGTAGTAAACATGAGGCAAATAAATATATAGTTGTTGCCGATGACGATAGTGCATCTAGACCCAAGAAAAGTCATACAGAGGGGGCATTTTCATTCCCCCCTCCACTGAGAGATGGAGAACAGTCAGTGCAGGCAAGCTCTAGTAAATCTTTATGGTCAAACAATTGCAATATAATTGTCACTGATGAAACTGATGACTGTACAAATACTTTGCTGAGTAACGATGACATGCTTGCTTCATGGAAGCGGAAAAGTACTGATACCTCACCTGATGAAAATAATGATGATGCTGTTAGATCCAGAAACTCTACGCCCTCGACACTCTCTAATTATGCCTATGCTGAAAGAGAGCATGGCAAGCAAGAAGAAGATGAAAAGATTGCGGCTCTTAGGGAAGAAGATACAGGGGTGTCACTTGAGGATGAAGAGGCAGCTGCTGTGCAAGAGCAAGTAAGGCAAATAAAAGCTCAGGAGGAAGAGTTTGAGACTTTCAACCTCAAGATAGTCCACAGGAAAAACAGAACTGGCTTCGAGGAGGACAAAAATTTTCATGTTGTTCTGAATTCTGTGATAGCAGGGCGCTATCATGTCACTGAATATCTTGGATCTGCTGCATTCAGCAAAGCTATACAAGCACATGATTTGCATACAGGAATGGATGTGTGTGTGAAAATTATAAAAAACAACAAAGATTTCTTTGATCAGAGCCTTGATGAGATTAAGCTTCTCAAGTATGTCAATAAGCATGATCCTGCTGACAAGTACCACCTTCTTCGATTGTACGATTACTTTTATTATCGAGAGCATTTGTTAATAGTATGTGAACTTCTCAAAGCAAACTTGTACGAATTTCATAAATTCAACCGTGAGTCAGGAGGGGAGGTCTACTTCACTATGCCAAGACTGCAGTCGATTACCATTCAGTGTCTTGAAGCGCTGCAGTTCTTGCATGGCCTTGGCTTGATACATTGTGACTTGAAGCCTGAGAATATACTAGTGAAAAGCTACAGTAGATGTGAGGTAAAAGTCATTGATCTTGGGAGTAGTTGCTTTGAGACGGATCACCTCTGCTCCTATGTTCAGTCCAGGTCCTATCGCGCTCCTGAGGTTATCTTGGGACTTCCATATGACAAGAAGATAGATATATGGTCACTTGGGTGTATCTTAGCCGAACTTTGTACTGGCAATGTACTCTTCCAGAATGATTCACCTGCAACTTTGCTTGCTCGGGTGATGGGAATCATTTGCCCTATTGATCAAAGTATGCTTGCCAAAGGACGGGATACGTACAAATACTTCACAAAAAATCACATGCTTTATGAGCGAAATCAGGAAACTAACAGACTGGAATACCTGATACCGAAAAAGACATCTTTAAGGCATCGACTGCCAATGGGCGACCAAGGGTTCATTGATTTTGTTGCTCATTTGCTTGAGATAAACCCAAAGAAGCGACCTTCTGCAGCTGAGGCTCTGAAGCACCCATGGCTGTCATATCCTTATGAACCCATATCATCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1183

Amino Acids

132.51

Weight (kDa)

4.9

Isoelectric Point (pI)

42.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 871 - 1173 2e-49 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 873 - 1077 7.5e-17 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2705
AarI CACCTGC 1 cut(s) 3247
Acc36I ACCTGC 1 cut(s) 3247
AccB7I CCANNNNNTGG 1 cut(s) 422
AccI GTMKAC 1 cut(s) 2913
AccII CGCG 1 cut(s) 3126
AciI CCGC 6 cut(s) 5, 43, 713, 1472, 2275, 2411
AclWI GGATC 8 cut(s) 217, 1463, 1583, 1859, 2319, 2641, 2771, 3096
AcsI RAATTY 5 cut(s) 1687, 2572, 2590, 2876, 2885
AcuI CTGAAG 3 cut(s) 1173, 1542, 3524
AfeI AGCGCT 2 cut(s) 1550, 2964
AfiI CCNNNNNNNGG 3 cut(s) 422, 530, 3306
AflII CTTAAG 1 cut(s) 677
AgeI ACCGGT 1 cut(s) 322
AhlI ACTAGT 1 cut(s) 3022
AjiI CACGTC 2 cut(s) 765, 1790
AjnI CCWGG 6 cut(s) 595, 1105, 1195, 1397, 1404, 3113
AjuI GAANNNNNNNTTGG 2 cut(s) 1884, 1916
AleI CACNNNNGTG 1 cut(s) 3184
AloI GAACNNNNNNTCC 2 cut(s) 760, 792
Alw26I GTCTC 6 cut(s) 755, 1092, 1369, 1968, 2507, 3077
AlwI GGATC 8 cut(s) 217, 1463, 1583, 1859, 2319, 2641, 2771, 3096
AlwNI CAGNNNCTG 3 cut(s) 1610, 1706, 2465
Ama87I CYCGRG 1 cut(s) 3255
Aor51HI AGCGCT 2 cut(s) 1550, 2964
AoxI GGCC 6 cut(s) 593, 1103, 1395, 1483, 1784, 2980
ApoI RAATTY 5 cut(s) 1687, 2572, 2590, 2876, 2885
AsiGI ACCGGT 1 cut(s) 322
Asp700I GAANNNNTTC 2 cut(s) 113, 1020
AspLEI GCGC 5 cut(s) 874, 1551, 2610, 2965, 3128
AspS9I GGNCC 5 cut(s) 425, 1103, 1193, 1484, 3117
AsuHPI GGTGA 8 cut(s) 236, 587, 1307, 1556, 2286, 3083, 3228, 3271
AvaI CYCGRG 1 cut(s) 3255
AvaII GGWCC 3 cut(s) 425, 1193, 3117
AxyI CCTNAGG 2 cut(s) 657, 3132
BaeI ACNNNNGTAYC 2 cut(s) 2421, 2454
BarI GAAGNNNNNNTAC 4 cut(s) 2838, 2870, 3308, 3340
BbvCI CCTCAGC 2 cut(s) 66, 3495
BccI CCATC 8 cut(s) 443, 1146, 1292, 1652, 1663, 1751, 2135, 3256
BciT130I CCWGG 6 cut(s) 597, 1107, 1197, 1399, 1406, 3115
BciVI GTATCC 2 cut(s) 373, 3304
BclI TGATCA 3 cut(s) 1507, 2728, 3283
BcoDI GTCTC 6 cut(s) 755, 1092, 1369, 1968, 2507, 3077
BcuI ACTAGT 1 cut(s) 3022
BfaI CTAG 5 cut(s) 606, 888, 2085, 2169, 3023
BfmI CTRYAG 4 cut(s) 2933, 2966, 3034, 3489
BfoI RGCGCY 3 cut(s) 1552, 2611, 2966
BfrI CTTAAG 1 cut(s) 677
BfuAI ACCTGC 1 cut(s) 3247
BfuI GTATCC 2 cut(s) 373, 3304
BglII AGATCT 1 cut(s) 2006
BmcAI AGTACT 4 cut(s) 604, 1328, 1931, 2284
Bme1390I CCNGG 6 cut(s) 597, 1107, 1197, 1399, 1406, 3115
Bme18I GGWCC 3 cut(s) 425, 1193, 3117
BmeT110I CYCGRG 1 cut(s) 3255
BmgBI CACGTC 2 cut(s) 765, 1790
BmgT120I GGNCC 5 cut(s) 425, 1103, 1193, 1484, 3117
BmiI GGNNCC 1 cut(s) 1403
BmrFI CCNGG 6 cut(s) 597, 1107, 1197, 1399, 1406, 3115
BmrI ACTGGG 2 cut(s) 1087, 1339
BmsI GCATC 4 cut(s) 1683, 2090, 2305, 3418
BmuI ACTGGG 2 cut(s) 1087, 1339
BoxI GACNNNNGTC 1 cut(s) 2935
BplI GAGNNNNNCTC 3 cut(s) 31, 131, 163
BpmI CTGGAG 1 cut(s) 573
Bpu10I CCTNAGC 3 cut(s) 66, 2496, 3495
BpuEI CTTGAG 6 cut(s) 140, 1031, 2465, 2510, 2741, 3482
BsaAI YACGTR 2 cut(s) 693, 3315
BsaBI GATNNNNATC 2 cut(s) 1506, 3266
BsaI GGTCTC 1 cut(s) 1968
BsaJI CCNNGG 5 cut(s) 722, 1025, 2983, 3430, 3512
BsaWI WCCGGW 1 cut(s) 322
BsaXI ACNNNNNCTCC 8 cut(s) 1073, 1103, 2492, 2522, 2895, 2925, 3083, 3113
Bsc4I CCNNNNNNNGG 3 cut(s) 422, 530, 3306
Bse118I RCCGGY 1 cut(s) 322
Bse21I CCTNAGG 2 cut(s) 657, 3132
Bse3DI GCAATG 2 cut(s) 427, 3220
Bse8I GATNNNNATC 2 cut(s) 1506, 3266
BseBI CCWGG 6 cut(s) 597, 1107, 1197, 1399, 1406, 3115
BseDI CCNNGG 5 cut(s) 722, 1025, 2983, 3430, 3512
BseGI GGATG 8 cut(s) 1165, 1507, 1678, 1762, 1801, 1819, 2455, 2692
BseJI GATNNNNATC 2 cut(s) 1506, 3266
BseLI CCNNNNNNNGG 3 cut(s) 422, 530, 3306
BseMI GCAATG 2 cut(s) 427, 3220
BseRI GAGGAG 2 cut(s) 1233, 2576
BseYI CCCAGC 2 cut(s) 205, 335
BsgI GTGCAG 2 cut(s) 1719, 2177
Bsh1236I CGCG 1 cut(s) 3126
BshFI GGCC 6 cut(s) 595, 1105, 1397, 1485, 1786, 2982
BshTI ACCGGT 1 cut(s) 322
BsiHKCI CYCGRG 1 cut(s) 3255
BsiSI CCGG 1 cut(s) 323
BslFI GGGAC 5 cut(s) 191, 352, 1148, 2030, 3159
BslI CCNNNNNNNGG 3 cut(s) 422, 530, 3306
BsmAI GTCTC 6 cut(s) 755, 1092, 1369, 1968, 2507, 3077
BsmBI CGTCTC 3 cut(s) 755, 1092, 3077
BsmFI GGGAC 5 cut(s) 191, 352, 1148, 2030, 3159
BsmI GAATGC 3 cut(s) 298, 359, 2642
BsnI GGCC 6 cut(s) 595, 1105, 1397, 1485, 1786, 2982
Bso31I GGTCTC 1 cut(s) 1968
BsoBI CYCGRG 1 cut(s) 3255
Bsp1407I TGTACA 1 cut(s) 2228
Bsp19I CCATGG 2 cut(s) 722, 3512
BspACI CCGC 6 cut(s) 5, 43, 713, 1472, 2275, 2411
BspANI GGCC 6 cut(s) 595, 1105, 1397, 1485, 1786, 2982
BspFNI CGCG 1 cut(s) 3126
BspHI TCATGA 1 cut(s) 1978
BspLI GGNNCC 1 cut(s) 1403
BspMAI CTGCAG 3 cut(s) 2937, 2970, 3493
BspMI ACCTGC 1 cut(s) 3247
BspPI GGATC 8 cut(s) 217, 1463, 1583, 1859, 2319, 2641, 2771, 3096
BspQI GCTCTTC 2 cut(s) 81, 1192
BspTI CTTAAG 1 cut(s) 677
BspTNI GGTCTC 1 cut(s) 1968
BsrDI GCAATG 2 cut(s) 427, 3220
BsrFI RCCGGY 1 cut(s) 322
BsrGI TGTACA 1 cut(s) 2228
BssAI RCCGGY 1 cut(s) 322
BssECI CCNNGG 5 cut(s) 722, 1025, 2983, 3430, 3512
BssT1I CCWWGG 4 cut(s) 722, 2983, 3430, 3512
Bst2UI CCWGG 6 cut(s) 597, 1107, 1197, 1399, 1406, 3115
BstAFI CTTAAG 1 cut(s) 677
BstAPI GCANNNNNTGC 2 cut(s) 2974, 3415
BstAUI TGTACA 1 cut(s) 2228
BstBAI YACGTR 2 cut(s) 693, 3315
BstC8I GCNNGC 7 cut(s) 1698, 2160, 2164, 2262, 2387, 3252, 3297
BstDSI CCRYGG 2 cut(s) 722, 3512
BstF5I GGATG 8 cut(s) 1165, 1507, 1678, 1762, 1801, 1819, 2455, 2692
BstFNI CGCG 1 cut(s) 3126
BstH2I RGCGCY 3 cut(s) 1552, 2611, 2966
BstHHI GCGC 5 cut(s) 874, 1551, 2610, 2965, 3128
BstMAI GTCTC 6 cut(s) 755, 1092, 1369, 1968, 2507, 3077
BstNI CCWGG 6 cut(s) 597, 1107, 1197, 1399, 1406, 3115
BstNSI RCATGY 2 cut(s) 2260, 3343
BstPAI GACNNNNGTC 1 cut(s) 2935
BstSCI CCNGG 6 cut(s) 595, 1105, 1195, 1397, 1404, 3113
BstSFI CTRYAG 4 cut(s) 2933, 2966, 3034, 3489
BstSNI TACGTA 1 cut(s) 3315
BstUI CGCG 1 cut(s) 3126
BstX2I RGATCY 4 cut(s) 1468, 2006, 2324, 2633
BstXI CCANNNNNNTGG 1 cut(s) 1145
BstYI RGATCY 4 cut(s) 1468, 2006, 2324, 2633
Bsu36I CCTNAGG 2 cut(s) 657, 3132
BsuI GTATCC 2 cut(s) 373, 3304
BsuRI GGCC 6 cut(s) 595, 1105, 1397, 1485, 1786, 2982
BtgI CCRYGG 2 cut(s) 722, 3512
BtrI CACGTC 2 cut(s) 765, 1790
BtsCI GGATG 8 cut(s) 1165, 1507, 1678, 1762, 1801, 1819, 2455, 2692
BtsI GCAGTG 2 cut(s) 88, 1885
BveI ACCTGC 1 cut(s) 3247
Cac8I GCNNGC 7 cut(s) 1698, 2160, 2164, 2262, 2387, 3252, 3297
CaiI CAGNNNCTG 3 cut(s) 1610, 1706, 2465
CciI TCATGA 1 cut(s) 1978
CfoI GCGC 5 cut(s) 874, 1551, 2610, 2965, 3128
Cfr10I RCCGGY 1 cut(s) 322
Cfr13I GGNCC 5 cut(s) 425, 1103, 1193, 1484, 3117
CspAI ACCGGT 1 cut(s) 322
CspCI CAANNNNNGTGG 2 cut(s) 1827, 1862
EciI GGCGGA 1 cut(s) 20
Eco105I TACGTA 1 cut(s) 3315
Eco130I CCWWGG 4 cut(s) 722, 2983, 3430, 3512
Eco147I AGGCCT 1 cut(s) 1397
Eco31I GGTCTC 1 cut(s) 1968
Eco47I GGWCC 3 cut(s) 425, 1193, 3117
Eco47III AGCGCT 2 cut(s) 1550, 2964
Eco57I CTGAAG 3 cut(s) 1173, 1542, 3524
Eco81I CCTNAGG 2 cut(s) 657, 3132
Eco88I CYCGRG 1 cut(s) 3255
EcoO109I RGGNCCY 1 cut(s) 3117
EcoRI GAATTC 1 cut(s) 2590
EcoRII CCWGG 6 cut(s) 595, 1105, 1195, 1397, 1404, 3113
EcoT14I CCWWGG 4 cut(s) 722, 2983, 3430, 3512
ErhI CCWWGG 4 cut(s) 722, 2983, 3430, 3512
Esp3I CGTCTC 3 cut(s) 755, 1092, 3077
FaqI GGGAC 5 cut(s) 191, 352, 1148, 2030, 3159
FauNDI CATATG 1 cut(s) 3154
FbaI TGATCA 3 cut(s) 1507, 2728, 3283
FblI GTMKAC 1 cut(s) 2913
FokI GGATG 8 cut(s) 1172, 1514, 1685, 1769, 1808, 1826, 2462, 2699
FspBI CTAG 5 cut(s) 606, 888, 2085, 2169, 3023
GlaI GCGC 5 cut(s) 873, 1550, 2609, 2964, 3127
GsaI CCCAGC 2 cut(s) 209, 339
GsuI CTGGAG 1 cut(s) 573
HaeII RGCGCY 3 cut(s) 1552, 2611, 2966
HaeIII GGCC 6 cut(s) 595, 1105, 1397, 1485, 1786, 2982
HapII CCGG 1 cut(s) 323
HhaI GCGC 5 cut(s) 874, 1551, 2610, 2965, 3128
Hin6I GCGC 5 cut(s) 872, 1549, 2608, 2963, 3126
HinP1I GCGC 5 cut(s) 872, 1549, 2608, 2963, 3126
HincII GTYRAC 2 cut(s) 819, 1075
HindII GTYRAC 2 cut(s) 819, 1075
HindIII AAGCTT 2 cut(s) 125, 2750
HpaI GTTAAC 1 cut(s) 1075
HpaII CCGG 1 cut(s) 323
HphI GGTGA 8 cut(s) 236, 587, 1307, 1556, 2286, 3083, 3228, 3271
Hpy166II GTNNAC 9 cut(s) 193, 517, 653, 819, 1075, 2036, 2536, 2852, 2914
Hpy8I GTNNAC 9 cut(s) 193, 517, 653, 819, 1075, 2036, 2536, 2852, 2914
HpyAV CCTTC 7 cut(s) 136, 851, 1776, 1910, 1943, 2807, 3495
HpyCH4IV ACGT 4 cut(s) 692, 764, 1789, 3314
HpySE526I ACGT 4 cut(s) 692, 764, 1789, 3314
HspAI GCGC 5 cut(s) 872, 1549, 2608, 2963, 3126
Ksp22I TGATCA 3 cut(s) 1507, 2728, 3283
KspAI GTTAAC 1 cut(s) 1075
LguI GCTCTTC 2 cut(s) 81, 1192
LmnI GCTCC 4 cut(s) 904, 1445, 3104, 3133
LweI GCATC 4 cut(s) 1683, 2090, 2305, 3418
MaeI CTAG 5 cut(s) 606, 888, 2085, 2169, 3023
MaeII ACGT 4 cut(s) 692, 764, 1789, 3314
MfeI CAATTG 2 cut(s) 1839, 2191
MflI RGATCY 4 cut(s) 1468, 2006, 2324, 2633
MlyI GAGTC 4 cut(s) 17, 140, 1976, 2906
MmeI TCCRAC 2 cut(s) 141, 1882
MroXI GAANNNNTTC 2 cut(s) 113, 1020
MseI TTAA 7 cut(s) 462, 678, 1074, 1643, 2748, 2840, 3404
MslI CAYNNNNRTG 2 cut(s) 1458, 3184
MspA1I CMGCKG 3 cut(s) 877, 2462, 3494
MspCI CTTAAG 1 cut(s) 677
MspI CCGG 1 cut(s) 323
MspR9I CCNGG 6 cut(s) 597, 1107, 1197, 1399, 1406, 3115
MunI CAATTG 2 cut(s) 1839, 2191
Mva1269I GAATGC 3 cut(s) 298, 359, 2642
MvaI CCWGG 6 cut(s) 597, 1107, 1197, 1399, 1406, 3115
MvnI CGCG 1 cut(s) 3126
NcoI CCATGG 2 cut(s) 722, 3512
NdeI CATATG 1 cut(s) 3154
NlaIV GGNNCC 1 cut(s) 1403
NspI RCATGY 2 cut(s) 2260, 3343
OliI CACNNNNGTG 1 cut(s) 3184
PagI TCATGA 1 cut(s) 1978
PaqCI CACCTGC 1 cut(s) 3247
PceI AGGCCT 1 cut(s) 1397
PciSI GCTCTTC 2 cut(s) 81, 1192
PctI GAATGC 3 cut(s) 298, 359, 2642
PdmI GAANNNNTTC 2 cut(s) 113, 1020
PfeI GAWTC 7 cut(s) 505, 527, 1006, 1334, 1529, 3233, 3267
PflMI CCANNNNNTGG 1 cut(s) 422
PinAI ACCGGT 1 cut(s) 322
PleI GAGTC 4 cut(s) 16, 140, 1976, 2905
PpsI GAGTC 4 cut(s) 16, 140, 1976, 2905
Ppu21I YACGTR 2 cut(s) 693, 3315
PpuMI RGGWCCY 1 cut(s) 3117
PshAI GACNNNNGTC 1 cut(s) 2935
PsiI TTATAA 1 cut(s) 2705
Psp5II RGGWCCY 1 cut(s) 3117
Psp6I CCWGG 6 cut(s) 595, 1105, 1195, 1397, 1404, 3113
PspFI CCCAGC 2 cut(s) 205, 335
PspGI CCWGG 6 cut(s) 595, 1105, 1195, 1397, 1404, 3113
PspN4I GGNNCC 1 cut(s) 1403
PspPI GGNCC 5 cut(s) 425, 1103, 1193, 1484, 3117
PspPPI RGGWCCY 1 cut(s) 3117
PstI CTGCAG 3 cut(s) 2937, 2970, 3493
PstNI CAGNNNCTG 3 cut(s) 1610, 1706, 2465
PsuI RGATCY 4 cut(s) 1468, 2006, 2324, 2633
PvuII CAGCTG 3 cut(s) 877, 2462, 3494
RseI CAYNNNNRTG 2 cut(s) 1458, 3184
SapI GCTCTTC 2 cut(s) 81, 1192
SaqAI TTAA 7 cut(s) 462, 678, 1074, 1643, 2748, 2840, 3404
Sau96I GGNCC 5 cut(s) 425, 1103, 1193, 1484, 3117
ScaI AGTACT 4 cut(s) 604, 1328, 1931, 2284
SchI GAGTC 4 cut(s) 17, 140, 1976, 2906
ScrFI CCNGG 6 cut(s) 597, 1107, 1197, 1399, 1406, 3115
SfaNI GCATC 4 cut(s) 1683, 2090, 2305, 3418
SfcI CTRYAG 4 cut(s) 2933, 2966, 3034, 3489
SinI GGWCC 3 cut(s) 425, 1193, 3117
SmiMI CAYNNNNRTG 2 cut(s) 1458, 3184
SmlI CTYRAG 7 cut(s) 119, 677, 1046, 2444, 2525, 2756, 3461
SmoI CTYRAG 7 cut(s) 119, 677, 1046, 2444, 2525, 2756, 3461
SnaBI TACGTA 1 cut(s) 3315
SpeI ACTAGT 1 cut(s) 3022
SseBI AGGCCT 1 cut(s) 1397
SsiI CCGC 6 cut(s) 5, 43, 713, 1472, 2275, 2411
SspMI CTAG 5 cut(s) 606, 888, 2085, 2169, 3023
StuI AGGCCT 1 cut(s) 1397
StyD4I CCNGG 6 cut(s) 595, 1105, 1195, 1397, 1404, 3113
StyI CCWWGG 4 cut(s) 722, 2983, 3430, 3512
TaiI ACGT 4 cut(s) 695, 767, 1792, 3317
TaqI TCGA 7 cut(s) 11, 2345, 2559, 2803, 2827, 2939, 3412
TatI WGTACW 7 cut(s) 602, 1326, 1929, 2228, 2282, 3206, 3217
TauI GCSGC 1 cut(s) 2414
TfiI GAWTC 7 cut(s) 505, 527, 1006, 1334, 1529, 3233, 3267
Tru1I TTAA 7 cut(s) 462, 678, 1074, 1643, 2748, 2840, 3404
Tru9I TTAA 7 cut(s) 462, 678, 1074, 1643, 2748, 2840, 3404
TspGWI ACGGA 3 cut(s) 229, 1925, 3101
Van91I CCANNNNNTGG 1 cut(s) 422
Vha464I CTTAAG 1 cut(s) 677
VpaK11BI GGWCC 3 cut(s) 425, 1193, 3117
XapI RAATTY 5 cut(s) 1687, 2572, 2590, 2876, 2885
XbaI TCTAGA 1 cut(s) 2084
XceI RCATGY 2 cut(s) 2260, 3343
XcmI CCANNNNNNNNNTGG 1 cut(s) 1326
XmiI GTMKAC 1 cut(s) 2913
XmnI GAANNNNTTC 2 cut(s) 113, 1020
XspI CTAG 5 cut(s) 606, 888, 2085, 2169, 3023
ZrmI AGTACT 4 cut(s) 604, 1328, 1931, 2284
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.