pycom06g20990

Protein kinase domain

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
Physical Location & Seq
Forward (+)
23823811 .. 23824583
773 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom06g20990.2

Sequence Viewer

Length: 324 bp
ATGCTTGCTTCGTGGAGGGAGAAAAGTAACGAGTCCTCACCTAGAATGAGTTCTAGGGATGAAAATAATGCTAATGCTGTTAGATCCACAAACTCGACTCCCTCAACACTCTCTAATTATGCTTATGCTGAAAGAGAGCAGGCCAAGCAAGAAGAAGATGAGACAATTACTGCTGTTAGGGAAGAAGATACGGGGGCATCACTTGAGGACGAAGAGGCGGCTGCTGTGCAAGAGCAAGTAAGGCAAATAAAGGTTCAAGAGGAAGAGTTTGAGACCTTCAACCTCAAGATTGTGCACAGGAAAAACAGGCACAACTGGCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

108

Amino Acids

12.37

Weight (kDa)

4.81

Isoelectric Point (pI)

64.87

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 218
AclWI GGATC 1 cut(s) 78
AgsI TTSAA 2 cut(s) 257, 280
Alw21I GWGCWC 1 cut(s) 297
Alw26I GTCTC 2 cut(s) 155, 266
Alw44I GTGCAC 1 cut(s) 293
AlwI GGATC 1 cut(s) 78
AoxI GGCC 1 cut(s) 141
ApaLI GTGCAC 1 cut(s) 293
ApeKI GCWGC 1 cut(s) 221
Asp700I GAANNNNTTC 1 cut(s) 49
AsuHPI GGTGA 1 cut(s) 30
BaeGI GKGCMC 1 cut(s) 297
Bbv12I GWGCWC 1 cut(s) 297
BbvI GCAGC 1 cut(s) 208
BcoDI GTCTC 2 cut(s) 155, 266
BfaI CTAG 2 cut(s) 42, 54
BisI GCNGC 2 cut(s) 219, 222
BlsI GCNGC 2 cut(s) 220, 223
BmsI GCATC 1 cut(s) 206
BpuEI CTTGAG 2 cut(s) 224, 269
BsaI GGTCTC 1 cut(s) 266
Bse1I ACTGG 1 cut(s) 320
BseGI GGATG 1 cut(s) 64
BseNI ACTGG 1 cut(s) 320
BseSI GKGCMC 1 cut(s) 297
BseXI GCAGC 1 cut(s) 208
BshFI GGCC 1 cut(s) 143
BsiHKAI GWGCWC 1 cut(s) 297
BsmAI GTCTC 2 cut(s) 155, 266
BsnI GGCC 1 cut(s) 143
Bso31I GGTCTC 1 cut(s) 266
Bsp1286I GDGCHC 1 cut(s) 297
Bsp143I GATC 1 cut(s) 83
BspACI CCGC 1 cut(s) 218
BspANI GGCC 1 cut(s) 143
BspPI GGATC 1 cut(s) 78
BspTNI GGTCTC 1 cut(s) 266
BsrI ACTGG 1 cut(s) 320
BssMI GATC 1 cut(s) 83
Bst6I CTCTTC 2 cut(s) 207, 258
BstC8I GCNNGC 2 cut(s) 6, 141
BstF5I GGATG 1 cut(s) 64
BstKTI GATC 1 cut(s) 86
BstMAI GTCTC 2 cut(s) 155, 266
BstMBI GATC 1 cut(s) 83
BstMWI GCNNNNNNNGC 3 cut(s) 145, 241, 316
BstSLI GKGCMC 1 cut(s) 297
BstV1I GCAGC 1 cut(s) 208
BstX2I RGATCY 1 cut(s) 83
BstYI RGATCY 1 cut(s) 83
BsuRI GGCC 1 cut(s) 143
BtsCI GGATG 1 cut(s) 64
Cac8I GCNNGC 2 cut(s) 6, 141
CviJI RGCY 3 cut(s) 143, 221, 319
CviKI_1 RGCY 3 cut(s) 143, 221, 319
DpnI GATC 1 cut(s) 85
DpnII GATC 1 cut(s) 83
Eam1104I CTCTTC 2 cut(s) 207, 258
EarI CTCTTC 2 cut(s) 207, 258
Eco31I GGTCTC 1 cut(s) 266
FaiI YATR 2 cut(s) 120, 126
Fnu4HI GCNGC 2 cut(s) 219, 222
FokI GGATG 1 cut(s) 71
Fsp4HI GCNGC 2 cut(s) 219, 222
FspBI CTAG 2 cut(s) 42, 54
GluI GCNGC 2 cut(s) 219, 222
HaeIII GGCC 1 cut(s) 143
HinfI GANTC 2 cut(s) 32, 97
HphI GGTGA 1 cut(s) 30
Hpy166II GTNNAC 1 cut(s) 295
Hpy188III TCNNGA 2 cut(s) 257, 286
Hpy8I GTNNAC 1 cut(s) 295
HpyAV CCTTC 1 cut(s) 286
HpyCH4V TGCA 2 cut(s) 229, 295
HpyF10VI GCNNNNNNNGC 3 cut(s) 145, 241, 316
Kzo9I GATC 1 cut(s) 83
LpnPI CCDG 4 cut(s) 125, 283, 292, 301
Lsp1109I GCAGC 1 cut(s) 208
LweI GCATC 1 cut(s) 206
MaeI CTAG 2 cut(s) 42, 54
MaeIII GTNAC 1 cut(s) 26
MalI GATC 1 cut(s) 85
MboI GATC 1 cut(s) 83
MboII GAAGA 6 cut(s) 164, 167, 194, 197, 224, 275
MflI RGATCY 1 cut(s) 83
MhlI GDGCHC 1 cut(s) 297
MluCI AATT 2 cut(s) 115, 165
MlyI GAGTC 2 cut(s) 41, 91
MnlI CCTC 7 cut(s) 9, 46, 112, 199, 208, 253, 293
MroXI GAANNNNTTC 1 cut(s) 49
MwoI GCNNNNNNNGC 3 cut(s) 145, 241, 316
NdeII GATC 1 cut(s) 83
PdmI GAANNNNTTC 1 cut(s) 49
PkrI GCNGC 2 cut(s) 220, 223
PleI GAGTC 2 cut(s) 40, 91
PpsI GAGTC 2 cut(s) 40, 91
PsuI RGATCY 1 cut(s) 83
SatI GCNGC 2 cut(s) 219, 222
Sau3AI GATC 1 cut(s) 83
SchI GAGTC 2 cut(s) 41, 91
SduI GDGCHC 1 cut(s) 297
SetI ASST 4 cut(s) 43, 255, 278, 285
SfaNI GCATC 1 cut(s) 206
SmlI CTYRAG 2 cut(s) 203, 284
SmoI CTYRAG 2 cut(s) 203, 284
Sse9I AATT 2 cut(s) 115, 165
SsiI CCGC 1 cut(s) 218
SspMI CTAG 2 cut(s) 42, 54
TaqI TCGA 1 cut(s) 95
TasI AATT 2 cut(s) 115, 165
TauI GCSGC 1 cut(s) 221
TseI GCWGC 1 cut(s) 221
TspDTI ATGAA 1 cut(s) 75
VneI GTGCAC 1 cut(s) 293
XmnI GAANNNNTTC 1 cut(s) 49
XspI CTAG 2 cut(s) 42, 54
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.