Protein kinase domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G73450 AT1G73460 AT1G73460 AT3G17750 |
| fragaria_vesca | FvH4_5g17930 FvH4_5g17930 FvH4_5g17930 |
| malus_domestica | MD06G1234900.v1.1 MD14G1242100.v1.1 |
| prunus_persica | Prupe.5G239700_v2.0.a1 Prupe.5G239700_v2.0.a1 Prupe.5G239700_v2.0.a1 Prupe.5G239700_v2.0.a1 |
| pyrus_communis | pycom06g20990 pycom14g20350 |
| rosa_chinensis | RchiOBHm_Chr7g0177671 |
| rosa_laevigata | RLG00000005515 |
| rosa_multiflora | Rmu_co8343931.1_g000001 Rmu_ssc0000236.1_g000003 |
| rosa_roxburghii | Rroxscaffold_3G00275670 |
| rosa_rugosa | Rorug06G0408400 |
| rosa_samantha | Rh7AG007900 Rh7BG007800 Rh7CG008300 Rh7DG008000 |
| rosa_wichuraiana | Rw7G000660 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2720 |
| AarI | CACCTGC | 1 cut(s) | 3262 |
| Acc36I | ACCTGC | 2 cut(s) | 445, 3262 |
| AccB1I | GGYRCC | 1 cut(s) | 3423 |
| AccBSI | CCGCTC | 2 cut(s) | 322, 1558 |
| AccI | GTMKAC | 1 cut(s) | 2928 |
| AccIII | TCCGGA | 1 cut(s) | 1474 |
| AciI | CCGC | 6 cut(s) | 43, 322, 849, 1043, 1558, 3496 |
| AclWI | GGATC | 8 cut(s) | 921, 1472, 1485, 1598, 1944, 2334, 2656, 2786 |
| AcoI | YGGCCR | 1 cut(s) | 3210 |
| AcsI | RAATTY | 4 cut(s) | 757, 2587, 2605, 2891 |
| AcuI | CTGAAG | 6 cut(s) | 104, 750, 1182, 1581, 3531, 3539 |
| AfaI | GTAC | 9 cut(s) | 613, 641, 697, 1113, 1562, 1902, 2807, 2825, 3223 |
| AfeI | AGCGCT | 1 cut(s) | 1132 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 431, 539 |
| AflII | CTTAAG | 3 cut(s) | 686, 946, 2981 |
| AhlI | ACTAGT | 1 cut(s) | 2045 |
| AjiI | CACGTC | 4 cut(s) | 25, 823, 1805, 3323 |
| AjnI | CCWGG | 3 cut(s) | 1114, 1406, 2794 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1579, 1611, 1899, 1931 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 769, 801 |
| Alw21I | GWGCWC | 3 cut(s) | 90, 3145, 3237 |
| Alw26I | GTCTC | 6 cut(s) | 1378, 1947, 2072, 2522, 3092, 3435 |
| AlwI | GGATC | 8 cut(s) | 921, 1472, 1485, 1598, 1944, 2334, 2656, 2786 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 1625, 1721, 2480 |
| Aor13HI | TCCGGA | 1 cut(s) | 1474 |
| Aor51HI | AGCGCT | 1 cut(s) | 1132 |
| AoxI | GGCC | 8 cut(s) | 1404, 1416, 1799, 1976, 2995, 3001, 3210, 3497 |
| ApaI | GGGCCC | 1 cut(s) | 1980 |
| ApeKI | GCWGC | 9 cut(s) | 71, 1133, 1880, 2426, 2474, 2477, 2654, 3201, 3430 |
| ApoI | RAATTY | 4 cut(s) | 757, 2587, 2605, 2891 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1508, 1540 |
| AseI | ATTAAT | 1 cut(s) | 1083 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 113, 570, 1947, 2305 |
| AspA2I | CCTAGG | 1 cut(s) | 1034 |
| AspLEI | GCGC | 3 cut(s) | 1133, 2625, 2980 |
| AspS9I | GGNCC | 5 cut(s) | 434, 1417, 1493, 1976, 1977 |
| AsuC2I | CCSGG | 2 cut(s) | 1981, 2620 |
| AsuNHI | GCTAGC | 1 cut(s) | 3310 |
| AvaII | GGWCC | 2 cut(s) | 434, 1493 |
| AvrII | CCTAGG | 1 cut(s) | 1034 |
| AxyI | CCTNAGG | 2 cut(s) | 666, 3147 |
| BaeGI | GKGCMC | 1 cut(s) | 1980 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2076, 2109 |
| BamHI | GGATCC | 1 cut(s) | 1477 |
| BanI | GGYRCC | 1 cut(s) | 3423 |
| BanII | GRGCYC | 2 cut(s) | 90, 1980 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 2816, 2848, 2853, 2885 |
| Bbv12I | GWGCWC | 3 cut(s) | 90, 3145, 3237 |
| BbvCI | CCTCAGC | 3 cut(s) | 66, 525, 1530 |
| BbvI | GCAGC | 9 cut(s) | 83, 1120, 1867, 2413, 2464, 2486, 2641, 3188, 3417 |
| BccI | CCATC | 9 cut(s) | 452, 458, 989, 1295, 1667, 1678, 1766, 2147, 3271 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2306, 2340 |
| BciT130I | CCWGG | 3 cut(s) | 1116, 1408, 2796 |
| BciVI | GTATCC | 2 cut(s) | 1255, 1370 |
| BclI | TGATCA | 3 cut(s) | 1831, 2743, 3298 |
| BcnI | CCSGG | 2 cut(s) | 1981, 2620 |
| BcoDI | GTCTC | 6 cut(s) | 1378, 1947, 2072, 2522, 3092, 3435 |
| BcuI | ACTAGT | 1 cut(s) | 2045 |
| BfmI | CTRYAG | 4 cut(s) | 438, 1608, 2948, 3049 |
| BfoI | RGCGCY | 3 cut(s) | 1134, 2626, 2981 |
| BfrI | CTTAAG | 3 cut(s) | 686, 946, 2981 |
| BfuAI | ACCTGC | 2 cut(s) | 445, 3262 |
| BfuI | GTATCC | 2 cut(s) | 1255, 1370 |
| BglII | AGATCT | 1 cut(s) | 2021 |
| BlnI | CCTAGG | 1 cut(s) | 1034 |
| BmcAI | AGTACT | 1 cut(s) | 613 |
| Bme1390I | CCNGG | 5 cut(s) | 1116, 1408, 1981, 2620, 2796 |
| Bme18I | GGWCC | 2 cut(s) | 434, 1493 |
| BmgBI | CACGTC | 4 cut(s) | 25, 823, 1805, 3323 |
| BmgT120I | GGNCC | 5 cut(s) | 434, 1417, 1493, 1976, 1977 |
| BmiI | GGNNCC | 6 cut(s) | 531, 1479, 1495, 1978, 1979, 3425 |
| BmrFI | CCNGG | 5 cut(s) | 1116, 1408, 1981, 2620, 2796 |
| BmsI | GCATC | 6 cut(s) | 1698, 1867, 1996, 2462, 3213, 3515 |
| BmtI | GCTAGC | 1 cut(s) | 3314 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2950 |
| Bpu10I | CCTNAGC | 3 cut(s) | 66, 525, 1530 |
| BpuEI | CTTGAG | 6 cut(s) | 1040, 2480, 2496, 2525, 3439, 3497 |
| BpuMI | CCSGG | 2 cut(s) | 1981, 2620 |
| Bsa29I | ATCGAT | 1 cut(s) | 1428 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1830, 3281 |
| BsaI | GGTCTC | 3 cut(s) | 1947, 2522, 3435 |
| BsaJI | CCNNGG | 7 cut(s) | 731, 813, 1034, 1979, 2998, 3445, 3527 |
| BsaWI | WCCGGW | 1 cut(s) | 1474 |
| BsaXI | ACNNNNNCTCC | 5 cut(s) | 29, 1082, 1112, 2910, 2940 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 431, 539 |
| Bse118I | RCCGGY | 1 cut(s) | 3426 |
| Bse1I | ACTGG | 5 cut(s) | 274, 2572, 3042, 3229, 3393 |
| Bse21I | CCTNAGG | 2 cut(s) | 666, 3147 |
| Bse3DI | GCAATG | 3 cut(s) | 436, 2212, 3235 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1830, 3281 |
| BseAI | TCCGGA | 1 cut(s) | 1474 |
| BseBI | CCWGG | 3 cut(s) | 1116, 1408, 2796 |
| BseCI | ATCGAT | 1 cut(s) | 1428 |
| BseDI | CCNNGG | 7 cut(s) | 731, 813, 1034, 1979, 2998, 3445, 3527 |
| BseGI | GGATG | 8 cut(s) | 1174, 1516, 1693, 1777, 1831, 2470, 2707, 3413 |
| BseJI | GATNNNNATC | 2 cut(s) | 1830, 3281 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 431, 539 |
| BseMI | GCAATG | 3 cut(s) | 436, 2212, 3235 |
| BseNI | ACTGG | 5 cut(s) | 274, 2572, 3042, 3229, 3393 |
| BseRI | GAGGAG | 3 cut(s) | 1236, 1547, 1654 |
| BseSI | GKGCMC | 1 cut(s) | 1980 |
| BseXI | GCAGC | 9 cut(s) | 83, 1120, 1867, 2413, 2464, 2486, 2641, 3188, 3417 |
| BseYI | CCCAGC | 1 cut(s) | 344 |
| BsgI | GTGCAG | 2 cut(s) | 1734, 2186 |
| BshFI | GGCC | 8 cut(s) | 1406, 1418, 1801, 1978, 2997, 3003, 3212, 3499 |
| BshNI | GGYRCC | 1 cut(s) | 3423 |
| BshVI | ATCGAT | 1 cut(s) | 1428 |
| BsiHKAI | GWGCWC | 3 cut(s) | 90, 3145, 3237 |
| BsiSI | CCGG | 4 cut(s) | 1475, 1981, 2619, 3427 |
| BslFI | GGGAC | 9 cut(s) | 20, 191, 361, 833, 1157, 1355, 1479, 2327, 3174 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 431, 539 |
| BsmAI | GTCTC | 6 cut(s) | 1378, 1947, 2072, 2522, 3092, 3435 |
| BsmFI | GGGAC | 9 cut(s) | 20, 191, 361, 833, 1157, 1355, 1479, 2327, 3174 |
| BsmI | GAATGC | 1 cut(s) | 368 |
| BsnI | GGCC | 8 cut(s) | 1406, 1418, 1801, 1978, 2997, 3003, 3212, 3499 |
| Bso31I | GGTCTC | 3 cut(s) | 1947, 2522, 3435 |
| Bsp120I | GGGCCC | 1 cut(s) | 1976 |
| Bsp1286I | GDGCHC | 4 cut(s) | 90, 1980, 3145, 3237 |
| Bsp13I | TCCGGA | 1 cut(s) | 1474 |
| Bsp19I | CCATGG | 1 cut(s) | 731 |
| BspACI | CCGC | 6 cut(s) | 43, 322, 849, 1043, 1558, 3496 |
| BspANI | GGCC | 8 cut(s) | 1406, 1418, 1801, 1978, 2997, 3003, 3212, 3499 |
| BspDI | ATCGAT | 1 cut(s) | 1428 |
| BspEI | TCCGGA | 1 cut(s) | 1474 |
| BspHI | TCATGA | 2 cut(s) | 1993, 2680 |
| BspLI | GGNNCC | 6 cut(s) | 531, 1479, 1495, 1978, 1979, 3425 |
| BspMAI | CTGCAG | 2 cut(s) | 442, 2952 |
| BspMI | ACCTGC | 2 cut(s) | 445, 3262 |
| BspOI | GCTAGC | 1 cut(s) | 3314 |
| BspPI | GGATC | 8 cut(s) | 921, 1472, 1485, 1598, 1944, 2334, 2656, 2786 |
| BspQI | GCTCTTC | 4 cut(s) | 81, 928, 1152, 3242 |
| BspT107I | GGYRCC | 1 cut(s) | 3423 |
| BspTI | CTTAAG | 3 cut(s) | 686, 946, 2981 |
| BspTNI | GGTCTC | 3 cut(s) | 1947, 2522, 3435 |
| BsrBI | CCGCTC | 2 cut(s) | 322, 1558 |
| BsrDI | GCAATG | 3 cut(s) | 436, 2212, 3235 |
| BsrFI | RCCGGY | 1 cut(s) | 3426 |
| BsrI | ACTGG | 5 cut(s) | 274, 2572, 3042, 3229, 3393 |
| BssAI | RCCGGY | 1 cut(s) | 3426 |
| BssECI | CCNNGG | 7 cut(s) | 731, 813, 1034, 1979, 2998, 3445, 3527 |
| BssT1I | CCWWGG | 5 cut(s) | 731, 813, 1034, 2998, 3445 |
| Bst2UI | CCWGG | 3 cut(s) | 1116, 1408, 2796 |
| Bst4CI | ACNGT | 8 cut(s) | 394, 799, 1294, 1621, 1680, 2160, 2237, 3053 |
| BstAFI | CTTAAG | 3 cut(s) | 686, 946, 2981 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 3430 |
| BstC8I | GCNNGC | 5 cut(s) | 1713, 2169, 2173, 2397, 3312 |
| BstDSI | CCRYGG | 2 cut(s) | 731, 3527 |
| BstF5I | GGATG | 8 cut(s) | 1174, 1516, 1693, 1777, 1831, 2470, 2707, 3413 |
| BstH2I | RGCGCY | 3 cut(s) | 1134, 2626, 2981 |
| BstHHI | GCGC | 3 cut(s) | 1133, 2625, 2980 |
| BstMAI | GTCTC | 6 cut(s) | 1378, 1947, 2072, 2522, 3092, 3435 |
| BstNI | CCWGG | 3 cut(s) | 1116, 1408, 2796 |
| BstNSI | RCATGY | 3 cut(s) | 2260, 2399, 3358 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2950 |
| BstSCI | CCNGG | 5 cut(s) | 1114, 1406, 1979, 2618, 2794 |
| BstSFI | CTRYAG | 4 cut(s) | 438, 1608, 2948, 3049 |
| BstSLI | GKGCMC | 1 cut(s) | 1980 |
| BstV1I | GCAGC | 9 cut(s) | 83, 1120, 1867, 2413, 2464, 2486, 2641, 3188, 3417 |
| BstX2I | RGATCY | 4 cut(s) | 1477, 1936, 2021, 2339 |
| BstYI | RGATCY | 4 cut(s) | 1477, 1936, 2021, 2339 |
| Bsu15I | ATCGAT | 1 cut(s) | 1428 |
| Bsu36I | CCTNAGG | 2 cut(s) | 666, 3147 |
| BsuI | GTATCC | 2 cut(s) | 1255, 1370 |
| BsuRI | GGCC | 8 cut(s) | 1406, 1418, 1801, 1978, 2997, 3003, 3212, 3499 |
| BsuTUI | ATCGAT | 1 cut(s) | 1428 |
| BtgI | CCRYGG | 2 cut(s) | 731, 3527 |
| BtrI | CACGTC | 4 cut(s) | 25, 823, 1805, 3323 |
| BtsCI | GGATG | 8 cut(s) | 1174, 1516, 1693, 1777, 1831, 2470, 2707, 3413 |
| BtsI | GCAGTG | 2 cut(s) | 88, 1900 |
| BtsIMutI | CAGTG | 5 cut(s) | 88, 399, 1626, 1900, 2972 |
| BveI | ACCTGC | 2 cut(s) | 445, 3262 |
| Cac8I | GCNNGC | 5 cut(s) | 1713, 2169, 2173, 2397, 3312 |
| CaiI | CAGNNNCTG | 3 cut(s) | 1625, 1721, 2480 |
| CciI | TCATGA | 2 cut(s) | 1993, 2680 |
| CfoI | GCGC | 3 cut(s) | 1133, 2625, 2980 |
| Cfr10I | RCCGGY | 1 cut(s) | 3426 |
| Cfr13I | GGNCC | 5 cut(s) | 434, 1417, 1493, 1976, 1977 |
| ClaI | ATCGAT | 1 cut(s) | 1428 |
| Csp6I | GTAC | 9 cut(s) | 612, 640, 696, 1112, 1561, 1901, 2806, 2824, 3222 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1842, 1877 |
| CviQI | GTAC | 9 cut(s) | 612, 640, 696, 1112, 1561, 1901, 2806, 2824, 3222 |
| EaeI | YGGCCR | 1 cut(s) | 3210 |
| Ecl136II | GAGCTC | 1 cut(s) | 88 |
| Eco130I | CCWWGG | 5 cut(s) | 731, 813, 1034, 2998, 3445 |
| Eco147I | AGGCCT | 1 cut(s) | 1406 |
| Eco24I | GRGCYC | 2 cut(s) | 90, 1980 |
| Eco31I | GGTCTC | 3 cut(s) | 1947, 2522, 3435 |
| Eco32I | GATATC | 1 cut(s) | 498 |
| Eco47I | GGWCC | 2 cut(s) | 434, 1493 |
| Eco47III | AGCGCT | 1 cut(s) | 1132 |
| Eco53kI | GAGCTC | 1 cut(s) | 88 |
| Eco57I | CTGAAG | 6 cut(s) | 104, 750, 1182, 1581, 3531, 3539 |
| Eco81I | CCTNAGG | 2 cut(s) | 666, 3147 |
| EcoICRI | GAGCTC | 1 cut(s) | 88 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1493, 1977 |
| EcoRI | GAATTC | 1 cut(s) | 2605 |
| EcoRII | CCWGG | 3 cut(s) | 1114, 1406, 2794 |
| EcoRV | GATATC | 1 cut(s) | 498 |
| EcoT14I | CCWWGG | 5 cut(s) | 731, 813, 1034, 2998, 3445 |
| EcoT38I | GRGCYC | 2 cut(s) | 90, 1980 |
| ErhI | CCWWGG | 5 cut(s) | 731, 813, 1034, 2998, 3445 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1683, 1715, 3401, 3433 |
| FaqI | GGGAC | 9 cut(s) | 20, 191, 361, 833, 1157, 1355, 1479, 2327, 3174 |
| FauNDI | CATATG | 1 cut(s) | 3169 |
| FbaI | TGATCA | 3 cut(s) | 1831, 2743, 3298 |
| FblI | GTMKAC | 1 cut(s) | 2928 |
| FokI | GGATG | 8 cut(s) | 1181, 1523, 1700, 1784, 1838, 2477, 2714, 3400 |
| FriOI | GRGCYC | 2 cut(s) | 90, 1980 |
| GlaI | GCGC | 3 cut(s) | 1132, 2624, 2979 |
| GsaI | CCCAGC | 1 cut(s) | 348 |
| HaeII | RGCGCY | 3 cut(s) | 1134, 2626, 2981 |
| HaeIII | GGCC | 8 cut(s) | 1406, 1418, 1801, 1978, 2997, 3003, 3212, 3499 |
| HapII | CCGG | 4 cut(s) | 1475, 1981, 2619, 3427 |
| HhaI | GCGC | 3 cut(s) | 1133, 2625, 2980 |
| Hin6I | GCGC | 3 cut(s) | 1131, 2623, 2978 |
| HinP1I | GCGC | 3 cut(s) | 1131, 2623, 2978 |
| HincII | GTYRAC | 2 cut(s) | 22, 1321 |
| HindII | GTYRAC | 2 cut(s) | 22, 1321 |
| HindIII | AAGCTT | 2 cut(s) | 125, 2765 |
| HpaII | CCGG | 4 cut(s) | 1475, 1981, 2619, 3427 |
| Hpy166II | GTNNAC | 6 cut(s) | 22, 662, 1321, 2051, 2867, 2929 |
| Hpy8I | GTNNAC | 6 cut(s) | 22, 662, 1321, 2051, 2867, 2929 |
| HpyCH4III | ACNGT | 8 cut(s) | 394, 799, 1294, 1621, 1680, 2160, 2237, 3053 |
| HpyCH4IV | ACGT | 7 cut(s) | 24, 717, 822, 1804, 2778, 2818, 3322 |
| HpySE526I | ACGT | 7 cut(s) | 24, 717, 822, 1804, 2778, 2818, 3322 |
| HspAI | GCGC | 3 cut(s) | 1131, 2623, 2978 |
| Kpn2I | TCCGGA | 1 cut(s) | 1474 |
| Ksp22I | TGATCA | 3 cut(s) | 1831, 2743, 3298 |
| LguI | GCTCTTC | 4 cut(s) | 81, 928, 1152, 3242 |
| LmnI | GCTCC | 4 cut(s) | 319, 2450, 3119, 3148 |
| Lsp1109I | GCAGC | 9 cut(s) | 83, 1120, 1867, 2413, 2464, 2486, 2641, 3188, 3417 |
| LweI | GCATC | 6 cut(s) | 1698, 1867, 1996, 2462, 3213, 3515 |
| MaeII | ACGT | 7 cut(s) | 24, 717, 822, 1804, 2778, 2818, 3322 |
| MaeIII | GTNAC | 9 cut(s) | 954, 1439, 1591, 1621, 1738, 2632, 2798, 3014, 3192 |
| MbiI | CCGCTC | 2 cut(s) | 322, 1558 |
| MfeI | CAATTG | 1 cut(s) | 1587 |
| MflI | RGATCY | 4 cut(s) | 1477, 1936, 2021, 2339 |
| MhlI | GDGCHC | 4 cut(s) | 90, 1980, 3145, 3237 |
| MlyI | GAGTC | 4 cut(s) | 2, 1337, 2758, 2921 |
| MmeI | TCCRAC | 2 cut(s) | 141, 1897 |
| MroI | TCCGGA | 1 cut(s) | 1474 |
| MroXI | GAANNNNTTC | 4 cut(s) | 113, 570, 1947, 2305 |
| MseI | TTAA | 7 cut(s) | 687, 947, 1083, 1658, 1701, 2904, 2982 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1467, 1992 |
| MspA1I | CMGCKG | 3 cut(s) | 524, 2477, 2654 |
| MspCI | CTTAAG | 3 cut(s) | 686, 946, 2981 |
| MspI | CCGG | 4 cut(s) | 1475, 1981, 2619, 3427 |
| MspR9I | CCNGG | 5 cut(s) | 1116, 1408, 1981, 2620, 2796 |
| MunI | CAATTG | 1 cut(s) | 1587 |
| Mva1269I | GAATGC | 1 cut(s) | 368 |
| MvaI | CCWGG | 3 cut(s) | 1116, 1408, 2796 |
| NciI | CCSGG | 2 cut(s) | 1981, 2620 |
| NcoI | CCATGG | 1 cut(s) | 731 |
| NdeI | CATATG | 1 cut(s) | 3169 |
| NheI | GCTAGC | 1 cut(s) | 3310 |
| NlaIV | GGNNCC | 6 cut(s) | 531, 1479, 1495, 1978, 1979, 3425 |
| NmeAIII | GCCGAG | 1 cut(s) | 2410 |
| NmuCI | GTSAC | 8 cut(s) | 954, 1439, 1621, 1738, 2632, 2798, 3014, 3192 |
| NspI | RCATGY | 3 cut(s) | 2260, 2399, 3358 |
| PaeI | GCATGC | 1 cut(s) | 2399 |
| PagI | TCATGA | 2 cut(s) | 1993, 2680 |
| PaqCI | CACCTGC | 1 cut(s) | 3262 |
| PceI | AGGCCT | 1 cut(s) | 1406 |
| PciSI | GCTCTTC | 4 cut(s) | 81, 928, 1152, 3242 |
| PctI | GAATGC | 1 cut(s) | 368 |
| PdmI | GAANNNNTTC | 4 cut(s) | 113, 570, 1947, 2305 |
| PleI | GAGTC | 4 cut(s) | 2, 1337, 2757, 2920 |
| PpsI | GAGTC | 4 cut(s) | 2, 1337, 2757, 2920 |
| PpuMI | RGGWCCY | 1 cut(s) | 1493 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2950 |
| PshBI | ATTAAT | 1 cut(s) | 1083 |
| PsiI | TTATAA | 1 cut(s) | 2720 |
| Psp124BI | GAGCTC | 1 cut(s) | 90 |
| Psp5II | RGGWCCY | 1 cut(s) | 1493 |
| Psp6I | CCWGG | 3 cut(s) | 1114, 1406, 2794 |
| PspFI | CCCAGC | 1 cut(s) | 344 |
| PspGI | CCWGG | 3 cut(s) | 1114, 1406, 2794 |
| PspN4I | GGNNCC | 6 cut(s) | 531, 1479, 1495, 1978, 1979, 3425 |
| PspOMI | GGGCCC | 1 cut(s) | 1976 |
| PspPI | GGNCC | 5 cut(s) | 434, 1417, 1493, 1976, 1977 |
| PspPPI | RGGWCCY | 1 cut(s) | 1493 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2230, 2262 |
| PstI | CTGCAG | 2 cut(s) | 442, 2952 |
| PstNI | CAGNNNCTG | 3 cut(s) | 1625, 1721, 2480 |
| PsuI | RGATCY | 4 cut(s) | 1477, 1936, 2021, 2339 |
| PvuII | CAGCTG | 3 cut(s) | 524, 2477, 2654 |
| RsaI | GTAC | 9 cut(s) | 613, 641, 697, 1113, 1562, 1902, 2807, 2825, 3223 |
| RsaNI | GTAC | 9 cut(s) | 612, 640, 696, 1112, 1561, 1901, 2806, 2824, 3222 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1467, 1992 |
| SacI | GAGCTC | 1 cut(s) | 90 |
| SapI | GCTCTTC | 4 cut(s) | 81, 928, 1152, 3242 |
| SaqAI | TTAA | 7 cut(s) | 687, 947, 1083, 1658, 1701, 2904, 2982 |
| Sau96I | GGNCC | 5 cut(s) | 434, 1417, 1493, 1976, 1977 |
| ScaI | AGTACT | 1 cut(s) | 613 |
| SchI | GAGTC | 4 cut(s) | 2, 1337, 2758, 2921 |
| ScrFI | CCNGG | 5 cut(s) | 1116, 1408, 1981, 2620, 2796 |
| SduI | GDGCHC | 4 cut(s) | 90, 1980, 3145, 3237 |
| SfaNI | GCATC | 6 cut(s) | 1698, 1867, 1996, 2462, 3213, 3515 |
| SfcI | CTRYAG | 4 cut(s) | 438, 1608, 2948, 3049 |
| SinI | GGWCC | 2 cut(s) | 434, 1493 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1467, 1992 |
| SmlI | CTYRAG | 9 cut(s) | 686, 946, 1055, 2459, 2511, 2540, 2981, 3418, 3476 |
| SmoI | CTYRAG | 9 cut(s) | 686, 946, 1055, 2459, 2511, 2540, 2981, 3418, 3476 |
| SpeI | ACTAGT | 1 cut(s) | 2045 |
| SphI | GCATGC | 1 cut(s) | 2399 |
| SseBI | AGGCCT | 1 cut(s) | 1406 |
| SsiI | CCGC | 6 cut(s) | 43, 322, 849, 1043, 1558, 3496 |
| SspI | AATATT | 1 cut(s) | 1081 |
| SstI | GAGCTC | 1 cut(s) | 90 |
| StuI | AGGCCT | 1 cut(s) | 1406 |
| StyD4I | CCNGG | 5 cut(s) | 1114, 1406, 1979, 2618, 2794 |
| StyI | CCWWGG | 5 cut(s) | 731, 813, 1034, 2998, 3445 |
| TaaI | ACNGT | 8 cut(s) | 394, 799, 1294, 1621, 1680, 2160, 2237, 3053 |
| TaiI | ACGT | 7 cut(s) | 27, 720, 825, 1807, 2781, 2821, 3325 |
| TaqI | TCGA | 4 cut(s) | 1428, 1951, 2842, 2954 |
| TatI | WGTACW | 2 cut(s) | 611, 3221 |
| TauI | GCSGC | 1 cut(s) | 3499 |
| Tru1I | TTAA | 7 cut(s) | 687, 947, 1083, 1658, 1701, 2904, 2982 |
| Tru9I | TTAA | 7 cut(s) | 687, 947, 1083, 1658, 1701, 2904, 2982 |
| TscAI | CASTG | 5 cut(s) | 88, 399, 1626, 1900, 2972 |
| TseFI | GTSAC | 8 cut(s) | 954, 1439, 1621, 1738, 2632, 2798, 3014, 3192 |
| TseI | GCWGC | 9 cut(s) | 71, 1133, 1880, 2426, 2474, 2477, 2654, 3201, 3430 |
| Tsp45I | GTSAC | 8 cut(s) | 954, 1439, 1621, 1738, 2632, 2798, 3014, 3192 |
| TspGWI | ACGGA | 2 cut(s) | 7, 3382 |
| TspRI | CASTG | 5 cut(s) | 88, 399, 1626, 1900, 2972 |
| Vha464I | CTTAAG | 3 cut(s) | 686, 946, 2981 |
| VpaK11BI | GGWCC | 2 cut(s) | 434, 1493 |
| VspI | ATTAAT | 1 cut(s) | 1083 |
| XapI | RAATTY | 4 cut(s) | 757, 2587, 2605, 2891 |
| XbaI | TCTAGA | 4 cut(s) | 1807, 1939, 2971, 3128 |
| XceI | RCATGY | 3 cut(s) | 2260, 2399, 3358 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1335 |
| XmaJI | CCTAGG | 1 cut(s) | 1034 |
| XmiI | GTMKAC | 1 cut(s) | 2928 |
| XmnI | GAANNNNTTC | 4 cut(s) | 113, 570, 1947, 2305 |
| ZrmI | AGTACT | 1 cut(s) | 613 |