RchiOBHm_Chr7g0177671

Protein kinase domain

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Reverse (-)
535178 .. 543125
7948 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ15828

Sequence Viewer

Length: 3573 bp
ATGGCTGACTCGAACTCGAACTCGAACTCGAACTCGGTTGATGTCATTCTTGACTTTCTGCGCAAGAATAGGTTTTCAAGAGCTGAGGCAGCTCTTCGCAGTGAGCTTGGTAATCGTCCTGATTTGAATGGTTTCCTTCAGAAGCTCGCTCTTGAAGAAAAGGACTCTGGTAATTCGTTGGAAGCTGAAAAGGGGGACAAACTGGTGGTGGAGAATCAAGGGCTGGGATCTCGGAACGGTGGTGAAGTTTCAAAGGAACTTATAGTGAAAGAGATAGAATGTGGAACTGGCAGAAATGGGTCTGAAATCAAATGGAAGAATGCTGCTTCTGTTGGGGAACGAAATAAACCTGTTGACGTGGCTACCAATCACAAGAGCTTCGCATTCTCTAAAGGTTTAGAGGATACTGTGCTTGATTTATATTCATGGAAGGTCAATCCAAGCAATGGTCCTGCTGAACCTTATCAAAATGATGTTGGTGGTAGTAACTCCAACCACCCAGAGCCTCAGATATTGCAACAGTCAAGGAATCATACTGGGGAGATTCCTGATTCTGGTAAAAGCACTGTGAAATCTGGAGAAGATATTAGCTTTTCTGGTGAGAAGAAAACTTCATGGGCTGGAAGTACTAGCAAAACCAATGTGGAAAGCAAGTACGATAGAACCCAAACAAGTGAACCTAAGGAACTTGATCAACAACTCAAGACTAGTACCACATGCTTCAAAGAAGGCTTTGCAGATAATCCATGGTCGAGAATTGAAGAACCAACAAGTTCATCATCCGAGATGTGGAAAGATTGTTCTGTTAAGACTGTATTTCCTTTCCCCAAAGAGGATATGTCAACAAGTTATGATAGTGCTTCTGGTTCTGATAAAAAAGAAGGAAAGAGAAAAGCTGTGCTGACTGATACTAGGGCAATAATAAAGGAGCAGGAGAATGAGGTGGCAAGAGCTTTATACTTGAGCAAGTCACAAGGGAGTTCTGAGCAGAAGACCATTAGTAGCTTGGTTTTTCCTATTTTGTCTGAGAATCAGAAAGAAGAGTTTCCAAGGTTGCCACCAGTAAAACTCAAGTCAGAGGACAAACCGTTGACTGTTAACTGGGAGGAAAAGTTTGAGCGAGACGGGCCTGGTGCAAAACTCAGTGCTGCCGACAATGCTCATCTTATTGGGGCATATTTGGATGTTCCCTTTGGACAAGAAATAAACTCTTCAGGTGGAAAAAGGAATGTAGGAGGAGGTAGTTGGCTGTCTGTAAGTCAGGGAATTGCAGAAGATACATCTGATCTGGTATCTGGTTTTGCTACTGTTGGTGATGGACTGAGTGAGGATTACCCAAATGAGTACTGGGATTCTGATGAATATGATGATGATGATGATGTGGGATACATGAGACAACCTATTGAAGATGAGGCCTGGTTCTTGGCTCATGAAATTGATTACCCAAGTGACAATGAAAAAGGAACAGGGCATGGGAGTGTTCCAGATCCGCAGGAAAGAGGCCCAACCAAAGATGAGGATGATGATCAATCTTTTGCTGAGGAGGATTCTTACTTTTCTGGTGAGCGTTACTTTCAAGGGAAAAATGTTGAACCAGTTATAGTTACAGATGATCCTATAGGAATCACAGTGACTGAGTTGTATGGGAGGACTGATGAGAATGATTTAATGGCTCAATATGATGGACAGTTGATGGATGAAGAGGAACTGAATTTGATGCGTGCAGAACCTGTCTGGCAGGGATTTGTCACTCAGACTAATGAACTCATCATGTTAGGGGATGGCAAAGTTCTGAATGAGGGTGGAAGGCCACGTCTAGATGATGTTTGCGTGGAGGATGATCAGCATGGTTCAGTGAGATCAATTGGTGTGGGGATCAATAGTGATGTTGCTGAAATTGGCAGTGAAGTACGGGAAAGTTTGGTTGGAGGTAGCAGTGAAGGGGATTTAGAATACTTCCGAGACCATGATGAAGGAGTCGGTGGGTCTCGGAAGCCTCATCATGACTCAGACCAAAAACATATTGATAGATCTAACAGGGACAACAAGAAAAGTAGTAAACATGAGGCAAATAAATATATAGTTGTTGCCGATGATAATAGTGCATCTAGACCCAAGAAAAATCATACAGAAGGGGCATTTTCATTCCCCCCTCCACTGAGAGATGGAGGACAGCCAGTGCAGGCAAGCTCCAGTAAAACTTTATGGTCAAACAATTGCAATGCAATTGTCACTGATGAAACTGATGACTGTACAAATACTTTGATGAGTTCCGATGACATGCTTCCTTCATGGAAGCGGAAAAGTACTGATACCTCAGGTGATGAAAATAATGATGATGCTGTTGGATCAGCAAACTCTACTCCCTCAACACTCTCAAATTATGCTTATGCTGAAAGAGAGCATGGCAAGCAAGAAGAAGATGAAAAGATTGCCACTCTCAGGGATGAAGATACAGGGGTATCACTTGAGGATGAAGAGGCAGCTGCTGTGCAAGAGCAAGTAAGGCAAATAAAGGCTCAGGAAGAAGAGTTTGAGACCTTCAACCTCAAGATTGTGCACAGGAAAAACAGAACTGGCTTCGAGGAAGACAAAAATTTTCATGTTGTTCTGAATTCTGTGATAGCTGGGCGCTATCATGTCACTGAATATCTTGGATCTGCTGCATTCAGCAAAGCTATACAAGCACATGATTTGCATACGGGAATGGATGTGTGTGTGAAAATTATAAAAAACAACAAAGATTTCTTTGATCAGAGCCTTGATGAGATAAAGCTTCTCAAGTACGTCAATAAGCATGATCCTGCTGATAAGTACCACCTTCTCCGATTGTACGATTACTTTTATTATCGAGAACATTTGTTAATAGTATGTGAACTTCTCAAAGCAAACTTGTACGAATTTCATAAATTCAACCGTGAGTCAGGAGGGGAGGTCTACTTCACTATGCCGAGACTGCAGTCAATTACCATTCAGTGTCTAGAGGCGCTGCAGTTCTTGCATGGCCTTGGCTTGATACATTGTGACTTGAAGCCTGAGAATATACTAGTGAAAAGCTACAGTAGATGTGAGGTGAAAGTCATTGATCTTGGGAGTAGTTGCTTTGAGACGGATCACCTCTGCTCCTATGTTCAATCCAGGTCCTATCGTGCTCCTGAGGTTATCTTGGGACTTCCATATGATAAGAAGATAGATATATGGTCACTTGGGTGTATCTTAGCCGAACTTTGTACTGGCAATGTACTCTTCCAGAATGATTCACCCGCAACTTTACTTGCACGGGTGATGGGAATCATTTGCCCTATTGATCAAAGTATGCTTGCCAAAGGACGGGATACGTACAAATACTTCACAAAAAACCACATGCTTTATGAACGAAATCAGGAAACAAACAGACTGGAATACCTGATACCAAAAAAGACATCTTTAAGGCATCGGCTGCCAATGGGGGACCAAGGGTTCATTGATTTTGTTGCTCATCTGCTTGAGATAAACCCAAAGAAGCGACCTTCTGCATCTGAAGCTCTGAAGCACCCATGGCTGTCATATCCATATGAACCCATATCATCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1190

Amino Acids

133.06

Weight (kDa)

4.88

Isoelectric Point (pI)

41.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 879 - 1181 1.7e-49 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 881 - 1085 7.6e-17 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2729
Acc16I TGCGCA 1 cut(s) 62
AccB7I CCANNNNNTGG 1 cut(s) 446
AccI GTMKAC 1 cut(s) 2937
AciI CCGC 3 cut(s) 1490, 2299, 3264
AclWI GGATC 8 cut(s) 235, 1481, 1607, 1883, 2356, 2665, 2795, 3120
AcsI RAATTY 5 cut(s) 1711, 2596, 2614, 2900, 2909
AcuI CTGAAG 4 cut(s) 122, 1197, 3540, 3548
AfiI CCNNNNNNNGG 6 cut(s) 446, 554, 789, 832, 2442, 3330
AhlI ACTAGT 2 cut(s) 707, 3046
AjiI CACGTC 2 cut(s) 358, 1814
AjnI CCWGG 3 cut(s) 1129, 1415, 3137
AjuI GAANNNNNNNTTGG 2 cut(s) 1908, 1940
AleI CACNNNNGTG 1 cut(s) 3208
AloI GAACNNNNNNTCC 4 cut(s) 784, 816, 3443, 3475
Alw21I GWGCWC 2 cut(s) 2562, 3154
Alw26I GTCTC 7 cut(s) 1116, 1387, 1956, 1992, 2531, 2947, 3101
Alw44I GTGCAC 1 cut(s) 2558
AlwI GGATC 8 cut(s) 235, 1481, 1607, 1883, 2356, 2665, 2795, 3120
AlwNI CAGNNNCTG 3 cut(s) 1634, 1730, 2489
AoxI GGCC 5 cut(s) 1127, 1413, 1501, 1808, 3004
ApaLI GTGCAC 1 cut(s) 2558
ApeKI GCWGC 8 cut(s) 89, 323, 1148, 2483, 2486, 2663, 2989, 3439
ApoI RAATTY 5 cut(s) 1711, 2596, 2614, 2900, 2909
Asp700I GAANNNNTTC 2 cut(s) 131, 1044
AspLEI GCGC 3 cut(s) 63, 2634, 2989
AspS9I GGNCC 5 cut(s) 449, 1127, 1502, 3141, 3451
AsuHPI GGTGA 9 cut(s) 254, 611, 1325, 1574, 2333, 3085, 3107, 3252, 3295
AvaII GGWCC 3 cut(s) 449, 3141, 3451
AxyI CCTNAGG 3 cut(s) 681, 2317, 3156
BaeGI GKGCMC 1 cut(s) 2562
BaeI ACNNNNGTAYC 4 cut(s) 2445, 2445, 2478, 2478
BarI GAAGNNNNNNTAC 4 cut(s) 2862, 2894, 3332, 3364
BbsI GAAGAC 2 cut(s) 998, 2595
Bbv12I GWGCWC 2 cut(s) 2562, 3154
BbvCI CCTCAGC 2 cut(s) 84, 1539
BbvI GCAGC 8 cut(s) 101, 310, 1135, 2473, 2495, 2650, 2976, 3426
BccI CCATC 6 cut(s) 1310, 1676, 1687, 1775, 2159, 3280
BciT130I CCWGG 3 cut(s) 1131, 1417, 3139
BciVI GTATCC 3 cut(s) 397, 1379, 3328
BclI TGATCA 5 cut(s) 691, 1525, 1840, 2752, 3307
BcoDI GTCTC 7 cut(s) 1116, 1387, 1956, 1992, 2531, 2947, 3101
BcuI ACTAGT 2 cut(s) 707, 3046
BfaI CTAG 7 cut(s) 630, 708, 912, 1817, 2109, 2981, 3047
BfmI CTRYAG 4 cut(s) 1617, 2957, 2990, 3058
BfoI RGCGCY 2 cut(s) 2635, 2990
BfuI GTATCC 3 cut(s) 397, 1379, 3328
BglII AGATCT 1 cut(s) 2030
BisI GCNGC 8 cut(s) 90, 324, 1149, 2484, 2487, 2664, 2990, 3440
BlsI GCNGC 8 cut(s) 91, 325, 1150, 2485, 2488, 2665, 2991, 3441
BmcAI AGTACT 3 cut(s) 628, 1346, 2308
Bme1390I CCNGG 3 cut(s) 1131, 1417, 3139
Bme18I GGWCC 3 cut(s) 449, 3141, 3451
BmgBI CACGTC 2 cut(s) 358, 1814
BmgT120I GGNCC 5 cut(s) 449, 1127, 1502, 3141, 3451
BmiI GGNNCC 1 cut(s) 3452
BmrFI CCNGG 3 cut(s) 1131, 1417, 3139
BmrI ACTGGG 3 cut(s) 546, 1111, 1357
BmsI GCATC 5 cut(s) 1707, 2114, 2329, 3442, 3524
BmuI ACTGGG 3 cut(s) 546, 1111, 1357
BoxI GACNNNNGTC 1 cut(s) 2959
BpiI GAAGAC 2 cut(s) 998, 2595
BpmI CTGGAG 2 cut(s) 597, 2176
Bpu10I CCTNAGC 3 cut(s) 84, 1539, 2520
BpuEI CTTGAG 7 cut(s) 686, 982, 1055, 2489, 2534, 2765, 3506
BsaAI YACGTR 1 cut(s) 3339
BsaBI GATNNNNATC 2 cut(s) 1524, 3290
BsaI GGTCTC 3 cut(s) 1956, 1992, 2531
BsaJI CCNNGG 5 cut(s) 746, 1049, 3007, 3454, 3536
BsaXI ACNNNNNCTCC 6 cut(s) 1097, 1127, 2919, 2949, 3107, 3137
Bsc4I CCNNNNNNNGG 6 cut(s) 446, 554, 789, 832, 2442, 3330
Bse21I CCTNAGG 3 cut(s) 681, 2317, 3156
Bse3DI GCAATG 3 cut(s) 451, 2227, 3244
Bse8I GATNNNNATC 2 cut(s) 1524, 3290
BseBI CCWGG 3 cut(s) 1131, 1417, 3139
BseDI CCNNGG 5 cut(s) 746, 1049, 3007, 3454, 3536
BseGI GGATG 9 cut(s) 779, 1189, 1525, 1702, 1786, 1843, 2452, 2479, 2716
BseJI GATNNNNATC 2 cut(s) 1524, 3290
BseLI CCNNNNNNNGG 6 cut(s) 446, 554, 789, 832, 2442, 3330
BseMI GCAATG 3 cut(s) 451, 2227, 3244
BseRI GAGGAG 2 cut(s) 1251, 1556
BseSI GKGCMC 1 cut(s) 2562
BseXI GCAGC 8 cut(s) 101, 310, 1135, 2473, 2495, 2650, 2976, 3426
BseYI CCCAGC 2 cut(s) 223, 2627
BsgI GTGCAG 2 cut(s) 1743, 2201
BshFI GGCC 5 cut(s) 1129, 1415, 1503, 1810, 3006
BsiHKAI GWGCWC 2 cut(s) 2562, 3154
BslFI GGGAC 4 cut(s) 209, 2054, 3183, 3464
BslI CCNNNNNNNGG 6 cut(s) 446, 554, 789, 832, 2442, 3330
BsmAI GTCTC 7 cut(s) 1116, 1387, 1956, 1992, 2531, 2947, 3101
BsmBI CGTCTC 2 cut(s) 1116, 3101
BsmFI GGGAC 4 cut(s) 209, 2054, 3183, 3464
BsmI GAATGC 3 cut(s) 325, 383, 2666
BsnI GGCC 5 cut(s) 1129, 1415, 1503, 1810, 3006
Bso31I GGTCTC 3 cut(s) 1956, 1992, 2531
Bsp1286I GDGCHC 2 cut(s) 2562, 3154
Bsp1407I TGTACA 1 cut(s) 2252
Bsp19I CCATGG 2 cut(s) 746, 3536
BspACI CCGC 3 cut(s) 1490, 2299, 3264
BspANI GGCC 5 cut(s) 1129, 1415, 1503, 1810, 3006
BspHI TCATGA 2 cut(s) 1429, 2002
BspLI GGNNCC 1 cut(s) 3452
BspMAI CTGCAG 2 cut(s) 2961, 2994
BspPI GGATC 8 cut(s) 235, 1481, 1607, 1883, 2356, 2665, 2795, 3120
BspQI GCTCTTC 1 cut(s) 99
BspTNI GGTCTC 3 cut(s) 1956, 1992, 2531
BsrDI GCAATG 3 cut(s) 451, 2227, 3244
BsrGI TGTACA 1 cut(s) 2252
BssECI CCNNGG 5 cut(s) 746, 1049, 3007, 3454, 3536
BssT1I CCWWGG 5 cut(s) 746, 1049, 3007, 3454, 3536
Bst2UI CCWGG 3 cut(s) 1131, 1417, 3139
Bst6I CTCTTC 7 cut(s) 99, 1035, 1216, 1695, 2472, 2523, 3251
BstAPI GCANNNNNTGC 2 cut(s) 2998, 3439
BstAUI TGTACA 1 cut(s) 2252
BstBAI YACGTR 1 cut(s) 3339
BstC8I GCNNGC 6 cut(s) 147, 1722, 2184, 2188, 2411, 3321
BstDSI CCRYGG 2 cut(s) 746, 3536
BstF5I GGATG 9 cut(s) 779, 1189, 1525, 1702, 1786, 1843, 2452, 2479, 2716
BstH2I RGCGCY 2 cut(s) 2635, 2990
BstHHI GCGC 3 cut(s) 63, 2634, 2989
BstMAI GTCTC 7 cut(s) 1116, 1387, 1956, 1992, 2531, 2947, 3101
BstNI CCWGG 3 cut(s) 1131, 1417, 3139
BstNSI RCATGY 3 cut(s) 720, 2284, 3367
BstPAI GACNNNNGTC 1 cut(s) 2959
BstSCI CCNGG 3 cut(s) 1129, 1415, 3137
BstSFI CTRYAG 4 cut(s) 1617, 2957, 2990, 3058
BstSLI GKGCMC 1 cut(s) 2562
BstSNI TACGTA 1 cut(s) 3339
BstV1I GCAGC 8 cut(s) 101, 310, 1135, 2473, 2495, 2650, 2976, 3426
BstV2I GAAGAC 2 cut(s) 998, 2595
BstX2I RGATCY 4 cut(s) 227, 1486, 2030, 2657
BstYI RGATCY 4 cut(s) 227, 1486, 2030, 2657
Bsu36I CCTNAGG 3 cut(s) 681, 2317, 3156
BsuI GTATCC 3 cut(s) 397, 1379, 3328
BsuRI GGCC 5 cut(s) 1129, 1415, 1503, 1810, 3006
BtgI CCRYGG 2 cut(s) 746, 3536
BtrI CACGTC 2 cut(s) 358, 1814
BtsCI GGATG 9 cut(s) 779, 1189, 1525, 1702, 1786, 1843, 2452, 2479, 2716
BtsI GCAGTG 3 cut(s) 106, 1909, 1942
Cac8I GCNNGC 6 cut(s) 147, 1722, 2184, 2188, 2411, 3321
CaiI CAGNNNCTG 3 cut(s) 1634, 1730, 2489
CciI TCATGA 2 cut(s) 1429, 2002
CfoI GCGC 3 cut(s) 63, 2634, 2989
Cfr13I GGNCC 5 cut(s) 449, 1127, 1502, 3141, 3451
CspCI CAANNNNNGTGG 2 cut(s) 1851, 1886
Eam1104I CTCTTC 7 cut(s) 99, 1035, 1216, 1695, 2472, 2523, 3251
EarI CTCTTC 7 cut(s) 99, 1035, 1216, 1695, 2472, 2523, 3251
Eco105I TACGTA 1 cut(s) 3339
Eco130I CCWWGG 5 cut(s) 746, 1049, 3007, 3454, 3536
Eco147I AGGCCT 1 cut(s) 1415
Eco31I GGTCTC 3 cut(s) 1956, 1992, 2531
Eco47I GGWCC 3 cut(s) 449, 3141, 3451
Eco57I CTGAAG 4 cut(s) 122, 1197, 3540, 3548
Eco81I CCTNAGG 3 cut(s) 681, 2317, 3156
EcoO109I RGGNCCY 1 cut(s) 3141
EcoRI GAATTC 1 cut(s) 2614
EcoRII CCWGG 3 cut(s) 1129, 1415, 3137
EcoT14I CCWWGG 5 cut(s) 746, 1049, 3007, 3454, 3536
ErhI CCWWGG 5 cut(s) 746, 1049, 3007, 3454, 3536
Esp3I CGTCTC 2 cut(s) 1116, 3101
FaqI GGGAC 4 cut(s) 209, 2054, 3183, 3464
FauI CCCGC 1 cut(s) 3271
FauNDI CATATG 2 cut(s) 3178, 3553
FbaI TGATCA 5 cut(s) 691, 1525, 1840, 2752, 3307
FblI GTMKAC 1 cut(s) 2937
Fnu4HI GCNGC 8 cut(s) 90, 324, 1149, 2484, 2487, 2664, 2990, 3440
FokI GGATG 9 cut(s) 766, 1196, 1532, 1709, 1793, 1850, 2459, 2486, 2723
Fsp4HI GCNGC 8 cut(s) 90, 324, 1149, 2484, 2487, 2664, 2990, 3440
FspBI CTAG 7 cut(s) 630, 708, 912, 1817, 2109, 2981, 3047
FspI TGCGCA 1 cut(s) 62
GlaI GCGC 3 cut(s) 62, 2633, 2988
GluI GCNGC 8 cut(s) 90, 324, 1149, 2484, 2487, 2664, 2990, 3440
GsaI CCCAGC 2 cut(s) 227, 2631
GsuI CTGGAG 2 cut(s) 597, 2176
HaeII RGCGCY 2 cut(s) 2635, 2990
HaeIII GGCC 5 cut(s) 1129, 1415, 1503, 1810, 3006
HhaI GCGC 3 cut(s) 63, 2634, 2989
Hin6I GCGC 3 cut(s) 61, 2632, 2987
HinP1I GCGC 3 cut(s) 61, 2632, 2987
HincII GTYRAC 4 cut(s) 355, 843, 1092, 1099
HindII GTYRAC 4 cut(s) 355, 843, 1092, 1099
HindIII AAGCTT 1 cut(s) 2774
HpaI GTTAAC 1 cut(s) 1099
HphI GGTGA 9 cut(s) 254, 611, 1325, 1574, 2333, 3085, 3107, 3252, 3295
Hpy166II GTNNAC 9 cut(s) 355, 677, 843, 1092, 1099, 2060, 2560, 2876, 2938
Hpy8I GTNNAC 9 cut(s) 355, 677, 843, 1092, 1099, 2060, 2560, 2876, 2938
HpyCH4IV ACGT 4 cut(s) 357, 1813, 2787, 3338
HpySE526I ACGT 4 cut(s) 357, 1813, 2787, 3338
HspAI GCGC 3 cut(s) 61, 2632, 2987
Ksp22I TGATCA 5 cut(s) 691, 1525, 1840, 2752, 3307
KspAI GTTAAC 1 cut(s) 1099
LguI GCTCTTC 1 cut(s) 99
LmnI GCTCC 4 cut(s) 928, 2195, 3128, 3157
Lsp1109I GCAGC 8 cut(s) 101, 310, 1135, 2473, 2495, 2650, 2976, 3426
LweI GCATC 5 cut(s) 1707, 2114, 2329, 3442, 3524
MaeI CTAG 7 cut(s) 630, 708, 912, 1817, 2109, 2981, 3047
MaeII ACGT 4 cut(s) 357, 1813, 2787, 3338
MfeI CAATTG 3 cut(s) 1863, 2215, 2226
MflI RGATCY 4 cut(s) 227, 1486, 2030, 2657
MhlI GDGCHC 2 cut(s) 2562, 3154
MlyI GAGTC 5 cut(s) 2, 158, 1986, 2000, 2930
MmeI TCCRAC 4 cut(s) 159, 516, 1906, 2326
MroXI GAANNNNTTC 2 cut(s) 131, 1044
MseI TTAA 5 cut(s) 807, 1098, 1667, 2864, 3428
MslI CAYNNNNRTG 2 cut(s) 1476, 3208
MspA1I CMGCKG 1 cut(s) 2486
MspR9I CCNGG 3 cut(s) 1131, 1417, 3139
MunI CAATTG 3 cut(s) 1863, 2215, 2226
Mva1269I GAATGC 3 cut(s) 325, 383, 2666
MvaI CCWGG 3 cut(s) 1131, 1417, 3139
NcoI CCATGG 2 cut(s) 746, 3536
NdeI CATATG 2 cut(s) 3178, 3553
NlaIV GGNNCC 1 cut(s) 3452
NmeAIII GCCGAG 1 cut(s) 2976
NmuCI GTSAC 8 cut(s) 969, 1448, 1630, 1747, 2230, 2641, 3023, 3201
NsbI TGCGCA 1 cut(s) 62
NspI RCATGY 3 cut(s) 720, 2284, 3367
OliI CACNNNNGTG 1 cut(s) 3208
PagI TCATGA 2 cut(s) 1429, 2002
PceI AGGCCT 1 cut(s) 1415
PciSI GCTCTTC 1 cut(s) 99
PctI GAATGC 3 cut(s) 325, 383, 2666
PdmI GAANNNNTTC 2 cut(s) 131, 1044
PflMI CCANNNNNTGG 1 cut(s) 446
PkrI GCNGC 8 cut(s) 91, 325, 1150, 2485, 2488, 2665, 2991, 3441
PleI GAGTC 5 cut(s) 2, 158, 1985, 2000, 2929
PpsI GAGTC 5 cut(s) 2, 158, 1985, 2000, 2929
Ppu21I YACGTR 1 cut(s) 3339
PpuMI RGGWCCY 1 cut(s) 3141
PshAI GACNNNNGTC 1 cut(s) 2959
PsiI TTATAA 1 cut(s) 2729
Psp5II RGGWCCY 1 cut(s) 3141
Psp6I CCWGG 3 cut(s) 1129, 1415, 3137
PspFI CCCAGC 2 cut(s) 223, 2627
PspGI CCWGG 3 cut(s) 1129, 1415, 3137
PspN4I GGNNCC 1 cut(s) 3452
PspPI GGNCC 5 cut(s) 449, 1127, 1502, 3141, 3451
PspPPI RGGWCCY 1 cut(s) 3141
PstI CTGCAG 2 cut(s) 2961, 2994
PstNI CAGNNNCTG 3 cut(s) 1634, 1730, 2489
PsuI RGATCY 4 cut(s) 227, 1486, 2030, 2657
PvuII CAGCTG 1 cut(s) 2486
RseI CAYNNNNRTG 2 cut(s) 1476, 3208
SapI GCTCTTC 1 cut(s) 99
SaqAI TTAA 5 cut(s) 807, 1098, 1667, 2864, 3428
SatI GCNGC 8 cut(s) 90, 324, 1149, 2484, 2487, 2664, 2990, 3440
Sau96I GGNCC 5 cut(s) 449, 1127, 1502, 3141, 3451
ScaI AGTACT 3 cut(s) 628, 1346, 2308
SchI GAGTC 5 cut(s) 2, 158, 1986, 2000, 2930
ScrFI CCNGG 3 cut(s) 1131, 1417, 3139
SduI GDGCHC 2 cut(s) 2562, 3154
SfaNI GCATC 5 cut(s) 1707, 2114, 2329, 3442, 3524
SfcI CTRYAG 4 cut(s) 1617, 2957, 2990, 3058
SinI GGWCC 3 cut(s) 449, 3141, 3451
SmiMI CAYNNNNRTG 2 cut(s) 1476, 3208
SmlI CTYRAG 7 cut(s) 701, 961, 1070, 2468, 2549, 2780, 3485
SmoI CTYRAG 7 cut(s) 701, 961, 1070, 2468, 2549, 2780, 3485
SnaBI TACGTA 1 cut(s) 3339
SpeI ACTAGT 2 cut(s) 707, 3046
SseBI AGGCCT 1 cut(s) 1415
SsiI CCGC 3 cut(s) 1490, 2299, 3264
SspMI CTAG 7 cut(s) 630, 708, 912, 1817, 2109, 2981, 3047
StuI AGGCCT 1 cut(s) 1415
StyD4I CCNGG 3 cut(s) 1129, 1415, 3137
StyI CCWWGG 5 cut(s) 746, 1049, 3007, 3454, 3536
TaiI ACGT 4 cut(s) 360, 1816, 2790, 3341
TaqI TCGA 7 cut(s) 11, 17, 23, 29, 752, 2583, 2851
TatI WGTACW 6 cut(s) 626, 1344, 2252, 2306, 3230, 3241
Tru1I TTAA 5 cut(s) 807, 1098, 1667, 2864, 3428
Tru9I TTAA 5 cut(s) 807, 1098, 1667, 2864, 3428
TseFI GTSAC 8 cut(s) 969, 1448, 1630, 1747, 2230, 2641, 3023, 3201
TseI GCWGC 8 cut(s) 89, 323, 1148, 2483, 2486, 2663, 2989, 3439
Tsp45I GTSAC 8 cut(s) 969, 1448, 1630, 1747, 2230, 2641, 3023, 3201
TspGWI ACGGA 1 cut(s) 3125
Van91I CCANNNNNTGG 1 cut(s) 446
VneI GTGCAC 1 cut(s) 2558
VpaK11BI GGWCC 3 cut(s) 449, 3141, 3451
XapI RAATTY 5 cut(s) 1711, 2596, 2614, 2900, 2909
XbaI TCTAGA 3 cut(s) 1816, 2108, 2980
XceI RCATGY 3 cut(s) 720, 2284, 3367
XcmI CCANNNNNNNNNTGG 2 cut(s) 1003, 1344
XmiI GTMKAC 1 cut(s) 2937
XmnI GAANNNNTTC 2 cut(s) 131, 1044
XspI CTAG 7 cut(s) 630, 708, 912, 1817, 2109, 2981, 3047
ZrmI AGTACT 3 cut(s) 628, 1346, 2308
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.