FvH4_5g18430

Protein of unknown function (DUF789)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0016851
Physical Location & Seq
Reverse (-)
10612938 .. 10619806
6869 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g18430.t2

Sequence Viewer

Length: 2562 bp
ATGGCAACAGAAAAGATGCATCGTTGCCTAGGAAGAACCAATAATGATAGCGAAAAGTTATCAATCAGAAGAAAACTTAAAGAAAAGGATAGTTTGCGGACATCCGTAGAGGAATGGGAAGCTGTTGCACGGAGGAAGTTTAACCACAGGTCTGCTTTTCTTACATTACTTTCCCTCGAACCTGACGACAGTATGAGGGTTGTGTCACTACCATTGCGATGCCCTGATAGTACGAATTCCTCAAGATCTGGTCCTCGGGTGAATGTGGAAAGCCTGCGTCTATTCTATACCAAACCACCAGATCCACTCAAGGTCATTCGACCAAATGTGCCACAAGGTTCTCAGCTTCTTGGTATTTATTGTGGAAAATCATTTACAAATGAAATATCTACTGTTCCTTCACCAAGACAGCTATCTCCTAATAAAGAATTGGCAAATGAAGCTACTAAATGGAATGAGCTTTCCTGGGAATCTTGTCAGAAGTCAGTGACCTGCAGTGCTTCCTCAAGTATGATGGAAACTGGTTCTAGTTCTAAAAGCTTTGCAGATTCAATTAGTGGCAGTGAAAAGGTTGACAATGTAAAGAGAAATTCAATAAAGAAGAGAAGAAAGAAGGGAAAAAAAGGCAAGAAGCTTTCAGGCGCCAGTAGCTCTACTGAACCTCACTCGCTGTCTGTGGAATGTGCCAATGGAAGCTCAGCTCCTGGATCCTGTGGTAACAGTGGTGGGAGTGGGCACCATGGGCCAGTATTACTTTCAACTTCCCCAGAAGCTTTGTTGCCTGAGAGTGGGATCAAGAATGAATCCCCAAAACCATGCATCTCTCATCAGGATGAACCACAAGCGGATATACATTCTGTGGGTAATTTGGGAAATCAGGGTATACTCCAAGATTCTGAGTTTCCCATTGAAGATTGGGTAATGAGTATCCCTCATATAGAAATGAATCGTTGTAATGATCTCCATGCCAGAGGTTACTCTGATATGGATGACTCTTCTGTTTTGGATTCAATTTCAGTTGGTTCTTACTGTGATGATAGTGATGGTCAAGATGAAAAATCTGCTGCGAATGAAATTCTCAAAAGCTATGATCAGTCAAGTTGCAGTTCTGGAGAGGGATATGTATCCTGTCAAAGCTTTTCGAATGATGATTTAGATACCGATGACAGTAGTGAGAGAATGAGGCAGGTGCTGTCTCCACCAATCTACCTGCCTCATTTAATTTGTAAGGTGGGAAATCAAGCACCAAAAGAAACCTCGCTTGCCGAAAGCAGCAGGGTAAATATTAGTTCCAGTTTGACTCATGTACATTCGGATGAACAAGCTGATAAGAGCTGGACTCCCACAGACACTGCAAAAGGGATTACTCAAAATATTAGTTCCGGAGAAGTAGCAGTCTGTGTAGGTCAAAGTTCTGGATATTTAACTTGTTATTCCAATACAACTGAGGACATGCTTCAAAATTTAGGGTATCAGGATGCAAGCCCAACTGAAGAGCTAGAAGACAAGCCTATAGCAGCTAAAGTCTTGAATTTTGAATCAAGAGATATGAATGCAGTTGAAGCTGAGTCAAACAGAATCTTAGAAGCAGTGAACAATGCTTGCCGGGCGCAACTGGCATCTGAAGCTATTCAAACGGTCACTGGGGTTCCAATTGCTGAATTTGAGAGGATTCTGTATCATTCATCCCCAGTTCTTCATGAATATCCCAATTTAATAAGGTGTCAAACTTGCTCAAGGAACCAGGTACCAGGTTCTCGAGTTTGCAGTCATGAGAGAACTAACATCTCTCTAGGATGCCTATGGAAGTGGTACCAGAGAAATGGGAGCTATGGATTGGAAATTAGGGCAGAAGAATTGGGATCAAAGGGACTGGGAGCTGATCGTGGTGCATTTCATGCTTATTTTGTTCCTTACTTGTCAGGGATTCAGCTTTTCCGGAGCTGTAAGAGTGATTCAGTACAAACTTCAGCTCCTTCCAATGATGCTATCCAGACAAGCGACTTGGAGCTGCTTTTTGAATATTTTGAATCTGAACAGCCTCAACAGAGACAACCTTTGTATGACAAGATAAAGGAGCTGATTAGAGGCGATCAACCAGATTCATATGTTTATGGAGATCCAACGAGTCTAGAAACGATAAATCTAAATGATCTCCATCCCAGATCCTGGTATTCAGTGGCATGGTATCCTATCTACAGAATACCTCATGGCAACTTGCGTGCGGCCTTTCTGACATACCATTCACTTGGTCATTTGGTCCTTAGAAGTGCCCATTTTGAGTCTCCAGGTGTGGATGCACATTTAGTATCTCCAGTTGTGGGTCTTCAAAGTTACAATGCTCAGGATGAATGCTGGTTCCGGGCAAGGCACTCAGGACCAAGACAGACAACTGCAACACCTGGGCCAGGCGTAAACAGTTATGGTGGAGTTTTGGAGGAGCGTCTGAGAACGCTTGAGGAGACGGCATCAATTATGGCAAGAGCTGTTGTGAAGAAAGGAAGTATGCCAACTGTAAACAGGCATCCGGATTATGAGTTCTTCCTTTCCAGGCGTCGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF789

Protein Analysis

854

Amino Acids

94.17

Weight (kDa)

5.89

Isoelectric Point (pI)

53.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF789 PF05623 553 - 658 5e-13 Protein of unknown function (DUF789)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016851)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g18430 FvH4_5g18430 FvH4_5g18430
rosa_chinensis RchiOBHm_Chr7g0177041
rosa_laevigata RLG00000005561
rosa_multiflora Rmu_sc0005310.1_g000030
rosa_roxburghii Rroxscaffold_3G00276160
rosa_rugosa Rorug06G0403000 Rorug06G0403100
rosa_samantha Rh7AG002700 Rh7BG003000 Rh7CG002300 Rh7DG002800
rosa_wichuraiana Rw7G000220

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1177
Acc36I ACCTGC 3 cut(s) 500, 1177, 1218
Acc65I GGTACC 2 cut(s) 1747, 1812
AccB1I GGYRCC 4 cut(s) 641, 735, 1747, 1812
AccB7I CCANNNNNTGG 1 cut(s) 2169
AccI GTMKAC 1 cut(s) 883
AccIII TCCGGA 3 cut(s) 1382, 1938, 2527
AciI CCGC 3 cut(s) 97, 845, 2225
AclWI GGATC 7 cut(s) 296, 702, 715, 800, 1870, 2114, 2160
AcsI RAATTY 6 cut(s) 235, 589, 1074, 1462, 1531, 1661
AcuI CTGAAG 3 cut(s) 1512, 1644, 1953
AcyI GRCGYC 2 cut(s) 642, 2554
AfaI GTAC 5 cut(s) 232, 1308, 1749, 1814, 1962
AfiI CCNNNNNNNGG 5 cut(s) 788, 2169, 2321, 2408, 2556
AjnI CCWGG 9 cut(s) 464, 703, 1743, 1750, 2168, 2287, 2401, 2407, 2549
AloI GAACNNNNNNTCC 2 cut(s) 2522, 2554
Alw26I GTCTC 4 cut(s) 1200, 2044, 2289, 2456
AlwI GGATC 7 cut(s) 296, 702, 715, 800, 1870, 2114, 2160
AlwNI CAGNNNCTG 4 cut(s) 704, 1192, 1352, 2169
Ama87I CYCGRG 2 cut(s) 255, 1758
Aor13HI TCCGGA 3 cut(s) 1382, 1938, 2527
AoxI GGCC 3 cut(s) 743, 2226, 2405
ApeKI GCWGC 4 cut(s) 1064, 1272, 1517, 2011
ApoI RAATTY 6 cut(s) 235, 589, 1074, 1462, 1531, 1661
Asp700I GAANNNNTTC 1 cut(s) 1629
Asp718I GGTACC 2 cut(s) 1747, 1812
AspA2I CCTAGG 1 cut(s) 28
AspLEI GCGC 2 cut(s) 644, 1612
AspS9I GGNCC 5 cut(s) 251, 743, 2260, 2378, 2405
AsuC2I CCSGG 2 cut(s) 1607, 2363
AsuHPI GGTGA 2 cut(s) 271, 393
AsuII TTCGAA 1 cut(s) 1142
AvaI CYCGRG 2 cut(s) 255, 1758
AvaII GGWCC 3 cut(s) 251, 2260, 2378
AvrII CCTAGG 1 cut(s) 28
BaeGI GKGCMC 2 cut(s) 738, 2275
BamHI GGATCC 1 cut(s) 707
BanI GGYRCC 4 cut(s) 641, 735, 1747, 1812
BbsI GAAGAC 2 cut(s) 1509, 2318
BbvI GCAGC 4 cut(s) 1051, 1284, 1529, 1998
BccI CCATC 3 cut(s) 508, 1037, 2166
BceAI ACGGC 1 cut(s) 2481
BciT130I CCWGG 9 cut(s) 466, 705, 1745, 1752, 2170, 2289, 2403, 2409, 2551
BciVI GTATCC 3 cut(s) 938, 1135, 2199
BclI TGATCA 1 cut(s) 1090
BcnI CCSGG 2 cut(s) 1607, 2363
BcoDI GTCTC 4 cut(s) 1200, 2044, 2289, 2456
BfaI CTAG 5 cut(s) 29, 528, 1499, 1793, 2132
BfmI CTRYAG 3 cut(s) 493, 1512, 2197
BfoI RGCGCY 1 cut(s) 645
BfuAI ACCTGC 3 cut(s) 500, 1177, 1218
BfuI GTATCC 3 cut(s) 938, 1135, 2199
BglII AGATCT 1 cut(s) 245
BisI GCNGC 5 cut(s) 1065, 1273, 1518, 2012, 2226
BlnI CCTAGG 1 cut(s) 28
BlpI GCTNAGC 1 cut(s) 697
BlsI GCNGC 5 cut(s) 1066, 1274, 1519, 2013, 2227
Bme18I GGWCC 3 cut(s) 251, 2260, 2378
BmeT110I CYCGRG 2 cut(s) 255, 1758
BmgT120I GGNCC 5 cut(s) 251, 743, 2260, 2378, 2405
BmiI GGNNCC 8 cut(s) 643, 709, 737, 1650, 1742, 1749, 1814, 2360
BmrI ACTGGG 3 cut(s) 1653, 1685, 1883
BmuI ACTGGG 3 cut(s) 1653, 1685, 1883
BpiI GAAGAC 2 cut(s) 1509, 2318
BplI GAGNNNNNCTC 4 cut(s) 916, 948, 1324, 1356
BpmI CTGGAG 3 cut(s) 1131, 2271, 2298
Bpu10I CCTNAGC 1 cut(s) 2343
Bpu1102I GCTNAGC 1 cut(s) 697
Bpu14I TTCGAA 1 cut(s) 1142
BpuEI CTTGAG 5 cut(s) 226, 293, 490, 1720, 2477
BpuMI CCSGG 2 cut(s) 1607, 2363
BsaBI GATNNNNATC 2 cut(s) 1123, 2157
BsaHI GRCGYC 2 cut(s) 642, 2554
BsaJI CCNNGG 5 cut(s) 28, 254, 465, 739, 2402
BsaWI WCCGGW 3 cut(s) 1382, 1938, 2527
BsaXI ACNNNNNCTCC 2 cut(s) 1957, 1987
Bsc4I CCNNNNNNNGG 5 cut(s) 788, 2169, 2321, 2408, 2556
Bse1I ACTGG 9 cut(s) 526, 645, 746, 1293, 1620, 1648, 1691, 1878, 2315
Bse3DI GCAATG 1 cut(s) 212
Bse8I GATNNNNATC 2 cut(s) 1123, 2157
BseAI TCCGGA 3 cut(s) 1382, 1938, 2527
BseBI CCWGG 9 cut(s) 466, 705, 1745, 1752, 2170, 2289, 2403, 2409, 2551
BseDI CCNNGG 5 cut(s) 28, 254, 465, 739, 2402
BseJI GATNNNNATC 2 cut(s) 1123, 2157
BseLI CCNNNNNNNGG 5 cut(s) 788, 2169, 2321, 2408, 2556
BseMI GCAATG 1 cut(s) 212
BseMII CTCAG 9 cut(s) 356, 711, 774, 888, 1437, 1557, 2357, 2388, 2438
BseNI ACTGG 9 cut(s) 526, 645, 746, 1293, 1620, 1648, 1691, 1878, 2315
BseRI GAGGAG 2 cut(s) 2453, 2474
BseSI GKGCMC 2 cut(s) 738, 2275
BseXI GCAGC 4 cut(s) 1051, 1284, 1529, 1998
BshFI GGCC 3 cut(s) 745, 2228, 2407
BshNI GGYRCC 4 cut(s) 641, 735, 1747, 1812
BsiHKCI CYCGRG 2 cut(s) 255, 1758
BsiSI CCGG 5 cut(s) 1383, 1606, 1939, 2362, 2528
BslFI GGGAC 1 cut(s) 1884
BslI CCNNNNNNNGG 5 cut(s) 788, 2169, 2321, 2408, 2556
BsmAI GTCTC 4 cut(s) 1200, 2044, 2289, 2456
BsmBI CGTCTC 1 cut(s) 2456
BsmFI GGGAC 1 cut(s) 1884
BsmI GAATGC 2 cut(s) 1558, 2357
BsnI GGCC 3 cut(s) 745, 2228, 2407
BsoBI CYCGRG 2 cut(s) 255, 1758
Bsp119I TTCGAA 1 cut(s) 1142
Bsp1286I GDGCHC 2 cut(s) 738, 2275
Bsp13I TCCGGA 3 cut(s) 1382, 1938, 2527
Bsp1407I TGTACA 1 cut(s) 1306
Bsp1720I GCTNAGC 1 cut(s) 697
Bsp19I CCATGG 1 cut(s) 739
BspACI CCGC 3 cut(s) 97, 845, 2225
BspANI GGCC 3 cut(s) 745, 2228, 2407
BspCNI CTCAG 9 cut(s) 355, 710, 775, 889, 1438, 1558, 2356, 2387, 2439
BspEI TCCGGA 3 cut(s) 1382, 1938, 2527
BspHI TCATGA 2 cut(s) 1699, 1771
BspLI GGNNCC 8 cut(s) 643, 709, 737, 1650, 1742, 1749, 1814, 2360
BspMAI CTGCAG 1 cut(s) 497
BspMI ACCTGC 3 cut(s) 500, 1177, 1218
BspPI GGATC 7 cut(s) 296, 702, 715, 800, 1870, 2114, 2160
BspQI GCTCTTC 1 cut(s) 1488
BspT104I TTCGAA 1 cut(s) 1142
BspT107I GGYRCC 4 cut(s) 641, 735, 1747, 1812
BsrDI GCAATG 1 cut(s) 212
BsrGI TGTACA 1 cut(s) 1306
BsrI ACTGG 9 cut(s) 526, 645, 746, 1293, 1620, 1648, 1691, 1878, 2315
BssECI CCNNGG 5 cut(s) 28, 254, 465, 739, 2402
BssNAI GTATAC 1 cut(s) 884
BssNI GRCGYC 2 cut(s) 642, 2554
BssT1I CCWWGG 2 cut(s) 28, 739
Bst1107I GTATAC 1 cut(s) 884
Bst2UI CCWGG 9 cut(s) 466, 705, 1745, 1752, 2170, 2289, 2403, 2409, 2551
Bst4CI ACNGT 8 cut(s) 191, 394, 722, 1031, 1169, 1639, 2420, 2515
Bst6I CTCTTC 3 cut(s) 596, 1000, 1488
BstACI GRCGYC 2 cut(s) 642, 2554
BstAPI GCANNNNNTGC 1 cut(s) 1898
BstAUI TGTACA 1 cut(s) 1306
BstBI TTCGAA 1 cut(s) 1142
BstC8I GCNNGC 5 cut(s) 275, 1263, 1483, 1603, 2223
BstDSI CCRYGG 1 cut(s) 739
BstENI CCTNNNNNAGG 1 cut(s) 2406
BstH2I RGCGCY 1 cut(s) 645
BstHHI GCGC 2 cut(s) 644, 1612
BstMAI GTCTC 4 cut(s) 1200, 2044, 2289, 2456
BstMWI GCNNNNNNNGC 8 cut(s) 440, 648, 742, 1562, 1607, 1616, 1625, 1898
BstNI CCWGG 9 cut(s) 466, 705, 1745, 1752, 2170, 2289, 2403, 2409, 2551
BstNSI RCATGY 1 cut(s) 1456
BstSFI CTRYAG 3 cut(s) 493, 1512, 2197
BstSLI GKGCMC 2 cut(s) 738, 2275
BstV1I GCAGC 4 cut(s) 1051, 1284, 1529, 1998
BstV2I GAAGAC 2 cut(s) 1509, 2318
BstX2I RGATCY 5 cut(s) 245, 301, 707, 2119, 2165
BstXI CCANNNNNNTGG 2 cut(s) 1823, 2249
BstYI RGATCY 5 cut(s) 245, 301, 707, 2119, 2165
BstZ17I GTATAC 1 cut(s) 884
BsuI GTATCC 3 cut(s) 938, 1135, 2199
BsuRI GGCC 3 cut(s) 745, 2228, 2407
BtgI CCRYGG 1 cut(s) 739
BtgZI GCGATG 1 cut(s) 232
BtsI GCAGTG 4 cut(s) 502, 568, 1350, 1596
BtsIMutI CAGTG 8 cut(s) 492, 502, 568, 727, 1350, 1596, 1641, 2184
BveI ACCTGC 3 cut(s) 500, 1177, 1218
Cac8I GCNNGC 5 cut(s) 275, 1263, 1483, 1603, 2223
CaiI CAGNNNCTG 4 cut(s) 704, 1192, 1352, 2169
CciI TCATGA 2 cut(s) 1699, 1771
CfoI GCGC 2 cut(s) 644, 1612
Cfr13I GGNCC 5 cut(s) 251, 743, 2260, 2378, 2405
CseI GACGC 3 cut(s) 266, 2432, 2543
CsiI ACCWGGT 2 cut(s) 1743, 1750
Csp6I GTAC 5 cut(s) 231, 1307, 1748, 1813, 1961
CviQI GTAC 5 cut(s) 231, 1307, 1748, 1813, 1961
DinI GGCGCC 1 cut(s) 643
Eam1104I CTCTTC 3 cut(s) 596, 1000, 1488
EarI CTCTTC 3 cut(s) 596, 1000, 1488
Eco130I CCWWGG 2 cut(s) 28, 739
Eco47I GGWCC 3 cut(s) 251, 2260, 2378
Eco57I CTGAAG 3 cut(s) 1512, 1644, 1953
Eco88I CYCGRG 2 cut(s) 255, 1758
EcoNI CCTNNNNNAGG 1 cut(s) 2406
EcoRI GAATTC 1 cut(s) 235
EcoRII CCWGG 9 cut(s) 464, 703, 1743, 1750, 2168, 2287, 2401, 2407, 2549
EcoT14I CCWWGG 2 cut(s) 28, 739
EcoT22I ATGCAT 2 cut(s) 21, 821
EgeI GGCGCC 1 cut(s) 643
EheI GGCGCC 1 cut(s) 643
ErhI CCWWGG 2 cut(s) 28, 739
Esp3I CGTCTC 1 cut(s) 2456
FaqI GGGAC 1 cut(s) 1884
FauNDI CATATG 1 cut(s) 2107
FbaI TGATCA 1 cut(s) 1090
FblI GTMKAC 1 cut(s) 883
Fnu4HI GCNGC 5 cut(s) 1065, 1273, 1518, 2012, 2226
Fsp4HI GCNGC 5 cut(s) 1065, 1273, 1518, 2012, 2226
FspBI CTAG 5 cut(s) 29, 528, 1499, 1793, 2132
GlaI GCGC 2 cut(s) 643, 1611
GluI GCNGC 5 cut(s) 1065, 1273, 1518, 2012, 2226
GsuI CTGGAG 3 cut(s) 1131, 2271, 2298
HaeII RGCGCY 1 cut(s) 645
HaeIII GGCC 3 cut(s) 745, 2228, 2407
HapII CCGG 5 cut(s) 1383, 1606, 1939, 2362, 2528
HgaI GACGC 3 cut(s) 266, 2432, 2543
HhaI GCGC 2 cut(s) 644, 1612
Hin1I GRCGYC 2 cut(s) 642, 2554
Hin6I GCGC 2 cut(s) 642, 1610
HinP1I GCGC 2 cut(s) 642, 1610
HincII GTYRAC 1 cut(s) 574
HindII GTYRAC 1 cut(s) 574
HindIII AAGCTT 4 cut(s) 538, 632, 771, 1135
HpaII CCGG 5 cut(s) 1383, 1606, 1939, 2362, 2528
HphI GGTGA 2 cut(s) 271, 393
Hpy166II GTNNAC 5 cut(s) 574, 884, 1594, 2416, 2518
Hpy188I TCNGA 9 cut(s) 68, 480, 898, 982, 1315, 1624, 2035, 2235, 2448
Hpy8I GTNNAC 5 cut(s) 574, 884, 1594, 2416, 2518
Hpy99I CGWCG 1 cut(s) 2559
HpyAV CCTTC 3 cut(s) 408, 607, 1986
HpyCH4III ACNGT 8 cut(s) 191, 394, 722, 1031, 1169, 1639, 2420, 2515
HpyF10VI GCNNNNNNNGC 8 cut(s) 440, 648, 742, 1562, 1607, 1616, 1625, 1898
Hsp92I GRCGYC 2 cut(s) 642, 2554
HspAI GCGC 2 cut(s) 642, 1610
KasI GGCGCC 1 cut(s) 641
Kpn2I TCCGGA 3 cut(s) 1382, 1938, 2527
KpnI GGTACC 2 cut(s) 1751, 1816
Ksp22I TGATCA 1 cut(s) 1090
LguI GCTCTTC 1 cut(s) 1488
LmnI GCTCC 8 cut(s) 706, 1827, 1877, 1941, 1978, 2008, 2077, 2440
Lsp1109I GCAGC 4 cut(s) 1051, 1284, 1529, 1998
MabI ACCWGGT 2 cut(s) 1743, 1750
MaeI CTAG 5 cut(s) 29, 528, 1499, 1793, 2132
MaeIII GTNAC 6 cut(s) 204, 487, 716, 974, 1639, 2333
MfeI CAATTG 1 cut(s) 1653
MflI RGATCY 5 cut(s) 245, 301, 707, 2119, 2165
MhlI GDGCHC 2 cut(s) 738, 2275
Mly113I GGCGCC 1 cut(s) 642
MlyI GAGTC 6 cut(s) 986, 1294, 1333, 1577, 2137, 2291
MmeI TCCRAC 1 cut(s) 2147
Mph1103I ATGCAT 2 cut(s) 21, 821
MroI TCCGGA 3 cut(s) 1382, 1938, 2527
MroXI GAANNNNTTC 1 cut(s) 1629
MseI TTAA 5 cut(s) 78, 141, 1220, 1424, 1715
MslI CAYNNNNRTG 3 cut(s) 217, 831, 1314
MspI CCGG 5 cut(s) 1383, 1606, 1939, 2362, 2528
MunI CAATTG 1 cut(s) 1653
Mva1269I GAATGC 2 cut(s) 1558, 2357
MvaI CCWGG 9 cut(s) 466, 705, 1745, 1752, 2170, 2289, 2403, 2409, 2551
MwoI GCNNNNNNNGC 8 cut(s) 440, 648, 742, 1562, 1607, 1616, 1625, 1898
NarI GGCGCC 1 cut(s) 642
NciI CCSGG 2 cut(s) 1607, 2363
NcoI CCATGG 1 cut(s) 739
NdeI CATATG 1 cut(s) 2107
NlaIV GGNNCC 8 cut(s) 643, 709, 737, 1650, 1742, 1749, 1814, 2360
NmuCI GTSAC 3 cut(s) 204, 487, 1639
NsiI ATGCAT 2 cut(s) 21, 821
NspI RCATGY 1 cut(s) 1456
NspV TTCGAA 1 cut(s) 1142
PaeR7I CTCGAG 1 cut(s) 1758
PagI TCATGA 2 cut(s) 1699, 1771
PaqCI CACCTGC 1 cut(s) 1177
PciSI GCTCTTC 1 cut(s) 1488
PcsI WCGNNNNNNNCGW 1 cut(s) 183
PctI GAATGC 2 cut(s) 1558, 2357
PdmI GAANNNNTTC 1 cut(s) 1629
PflMI CCANNNNNTGG 1 cut(s) 2169
PfoI TCCNGGA 1 cut(s) 703
PkrI GCNGC 5 cut(s) 1066, 1274, 1519, 2013, 2227
PleI GAGTC 6 cut(s) 986, 1294, 1333, 1576, 2136, 2290
PluTI GGCGCC 1 cut(s) 645
PpsI GAGTC 6 cut(s) 986, 1294, 1333, 1576, 2136, 2290
Psp6I CCWGG 9 cut(s) 464, 703, 1743, 1750, 2168, 2287, 2401, 2407, 2549
PspGI CCWGG 9 cut(s) 464, 703, 1743, 1750, 2168, 2287, 2401, 2407, 2549
PspN4I GGNNCC 8 cut(s) 643, 709, 737, 1650, 1742, 1749, 1814, 2360
PspPI GGNCC 5 cut(s) 251, 743, 2260, 2378, 2405
PstI CTGCAG 1 cut(s) 497
PstNI CAGNNNCTG 4 cut(s) 704, 1192, 1352, 2169
PsuI RGATCY 5 cut(s) 245, 301, 707, 2119, 2165
RsaI GTAC 5 cut(s) 232, 1308, 1749, 1814, 1962
RsaNI GTAC 5 cut(s) 231, 1307, 1748, 1813, 1961
RseI CAYNNNNRTG 3 cut(s) 217, 831, 1314
SapI GCTCTTC 1 cut(s) 1488
SaqAI TTAA 5 cut(s) 78, 141, 1220, 1424, 1715
SatI GCNGC 5 cut(s) 1065, 1273, 1518, 2012, 2226
Sau96I GGNCC 5 cut(s) 251, 743, 2260, 2378, 2405
SchI GAGTC 6 cut(s) 986, 1294, 1333, 1577, 2137, 2291
SduI GDGCHC 2 cut(s) 738, 2275
SexAI ACCWGGT 2 cut(s) 1743, 1750
SfcI CTRYAG 3 cut(s) 493, 1512, 2197
SfoI GGCGCC 1 cut(s) 643
Sfr274I CTCGAG 1 cut(s) 1758
SfuI TTCGAA 1 cut(s) 1142
SinI GGWCC 3 cut(s) 251, 2260, 2378
SlaI CTCGAG 1 cut(s) 1758
SmiMI CAYNNNNRTG 3 cut(s) 217, 831, 1314
SmlI CTYRAG 6 cut(s) 241, 308, 505, 1735, 1758, 2456
SmoI CTYRAG 6 cut(s) 241, 308, 505, 1735, 1758, 2456
SsiI CCGC 3 cut(s) 97, 845, 2225
SspDI GGCGCC 1 cut(s) 641
SspI AATATT 3 cut(s) 1285, 1375, 2024
SspMI CTAG 5 cut(s) 29, 528, 1499, 1793, 2132
StyI CCWWGG 2 cut(s) 28, 739
TaaI ACNGT 8 cut(s) 191, 394, 722, 1031, 1169, 1639, 2420, 2515
TaqI TCGA 4 cut(s) 177, 319, 1142, 1759
TatI WGTACW 2 cut(s) 1306, 1960
TauI GCSGC 1 cut(s) 2228
Tru1I TTAA 5 cut(s) 78, 141, 1220, 1424, 1715
Tru9I TTAA 5 cut(s) 78, 141, 1220, 1424, 1715
TscAI CASTG 8 cut(s) 492, 502, 568, 727, 1357, 1596, 1648, 2184
TseFI GTSAC 3 cut(s) 204, 487, 1639
TseI GCWGC 4 cut(s) 1064, 1272, 1517, 2011
Tsp45I GTSAC 3 cut(s) 204, 487, 1639
TspGWI ACGGA 2 cut(s) 94, 145
TspRI CASTG 8 cut(s) 492, 502, 568, 727, 1357, 1596, 1648, 2184
Van91I CCANNNNNTGG 1 cut(s) 2169
VpaK11BI GGWCC 3 cut(s) 251, 2260, 2378
XagI CCTNNNNNAGG 1 cut(s) 2406
XapI RAATTY 6 cut(s) 235, 589, 1074, 1462, 1531, 1661
XbaI TCTAGA 1 cut(s) 2131
XceI RCATGY 1 cut(s) 1456
XhoI CTCGAG 1 cut(s) 1758
XmaJI CCTAGG 1 cut(s) 28
XmiI GTMKAC 1 cut(s) 883
XmnI GAANNNNTTC 1 cut(s) 1629
XspI CTAG 5 cut(s) 29, 528, 1499, 1793, 2132
Zsp2I ATGCAT 2 cut(s) 21, 821
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.