RchiOBHm_Chr7g0177041

Protein of unknown function (DUF789)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0016851
Physical Location & Seq
Forward (+)
173219 .. 180058
6840 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ15769

Sequence Viewer

Length: 2757 bp
ATGGCAACAGAAAAGATGCATCGTTGCCTAAGAAGAACCAATAATGATAGCCAAAAATTATCAATCAGAAGAAAATTTAAAGAAAAGAATAGTTTGCGGACATCCTTAGAGGATTGGGAAGCGGCTTCTGTCGCACGGAGGAACTTTAACCATAGGTCTGCTTTCCTTACATTGCTTTCCCTTGAACCTGACGACAGTTTGAGGATTGTTGCACTACCATTGCATTGCCCTGTCAGTACAAATTTCTCAGGATCTGGTGCTCGGGTGAATATGGATAGTTTGCGTCTGTTCTATACGAAAGGAGTGAATGTTATTAGTCCAAAGGTGCAGCAAGGTTCTCCGCTTGCTGGTTCTCATTGTGGCAAATCATTTACGAATAGCAGCTTTGCTGTCTCAACTGTGAGACACCAATCTCAAAATAAAGAATTGCCATATGAAGCTACTAACTCAAATGAGCTTTTCAGGGAATCTTGTCAGAAGTCATTGACCTGCAGTGCTTCCTCAAGTATGATTGAAATTGGTTCTAATTCTAACAACTTGTCAGATACAGTTGGTGGTAGTGAAAAAGTTGACAATGTAAAGAGAAAATCAAGAAAGAAGAGTAGAAAAAAGGGGGAAAAGGGCAAGAAGCTTTCAGGCACCAGTAGCTCCGCTGGACCTCACATGCTGTCTGTAGAATGTGCTGATGAAAGTTCAGCTTCCAAAACCTGTGGTAACAGTGGTGGGAGTGGGCACTGTGGGCCAGTATCACTTTCAACTACCCCAGAAGTTTCATTGCCTGAGAGTGGGGTCAAGAATGAATCCCCAAAATCATGCATCTCTCATCAAGATGAGCTGGAAGTGTATATACCTGCTGTGGGTAATTTGGGACATCAGAGTGTACTCCAAGATTCTGAGTTTCCCCTCGAAGATTGGGTAGGGAGTATCCCTCATATACAAATGAGTCATTGTAATGATCTCCATACCGGAGGTTACTCTGATATGCATGACTCTTTTGTTTTGGATTCAATTTCAGTTGGTTTAAACTGTGATGATAATGACAGTGATGGTCATGATGAAAAACATGCTGAGAAGGAAATTCACAGATTATATGAACCATCAGGTTTCAGTTCCAGAAAGGGATATTTTTCCTGTCAAAGCTTGTTGAATGATGTTGTAAAAATCCATGATAGTAGTGAGAGAACCAGGCATGGTATTCCAAAGAGAGGGGATAAAATGCAACTAAAAGATAGGGTTTCCAAGGAGTTAGAAAGAGAAGGTGAATCAAATCTGCTTCAGGTGCAGTACCTTCCTCATTTACTTTGCAAGGCAGGAATTCAAGCACAGAAAGAAACCTCGCTTGCCGAAAGCAGCAGGGTAAATCCCAGTTCTGGATCTCTAAACCACAAGTTGGTGCCCATTGAGTTAAAGGATCCAGGGACAAGCTCTACTTCCAGTTTAGCTGATGTACATTTGGATAAGCCAGCTGATAAGAGATGGACTCCCACAGATGCTGCTAAAGGGATTACTCAAAATAATAGTTCTGAAGAAGCAGTAGTCTGCGTTGGTCAGAGTTCTGGAGACGTAACTTGTAATTCCGATAAAACTGAGGACATGCTTCTAAAATTAGGGTATCAGGATGCAAGTACAATTGAAGAGCTAAAAGACAAGCTTAATGCAGCTAAATGCATGAATTTTGAACCTAAAGATCTGAATGCAGTTGAACCTGAGTCAAACAGAATAATAGAAGCAGTGAATAATGCATGCAGGGCACAACTGGCATCTGAAGCTGTTCAAATGTTCACTGGTGGTCCAATTGCTCAATTTGAAAGACTTCTTTATCATTCATCCCCAGTTGTTCATGAATCACCCAATTTTATAAGGTGTCAAACTTGCTCACGGAACCAGGTACCAAGATTGCTAGTCTGCAGTCATGAGACAACTAACATCTCTTTAGGATGCCTATGGAAGTGGTATCAGAGAAGTGGGAGCTATGGGTTGGAAATAAGGGCAGAGGAATTTGGAAATTCAAAGGGACTGGGTGCTGATCGTTGTGCATTTCATGCTTATTTTGCTCCTTACTTGTCAGCGATTCAGCTTTTCCGGAGCTGTAGGAGTGATTCAGTCTGTAATGCAGTCTCTATAAACGAGCTGTGTATTTCGAAACAATCTTCAGCTCCTGCCAACGATCCTGTCCAGTTAACTGATACAACGAGGTCAAGTGACTTGGAACTGCTTTTTGAATATTTTGAGTCTGAACAGCCTCAGCAGAGACAACCTTTGTATGACAAGATAAAGGAACTGATTAGAGGTGATCAACCATCATATTCAAATGTTTATGGAGATCCAACTACTCTAGAAACGATAGATCTAAACGATCTCCATCCCAGATCCTGGTATTCAGTGGCATGGTATCCTATTTACAGGATACCTCATGGAAACTTGCGTGCGGCCTTCTTGACTTACCATTCTCTTGGTCATTTGGTCTGTAGAAGTGCCAATTTTGAGTCTCCAAGTGTGGATGCGTGTATAGTATCTCCAGTTGTGGGTCTTCAGAGTTACAATGCTCAGGATGAATGCTGGTTCCAGCCAAGGCACTCGCAGACAACTGTAACACCAGGGCCAGGCTTAAACTGTTATAATGGAGTTTTGGAGGAGCGTTTGAGAACACTAGAGGAAACGGCATCCCTTATGGCAAGAGCTGTTGTGAAGAAAGGAAGTATGACATCTGTAAACAGGCATCCGGACTATGAGTTCTTCCTTTCTAGGCGTCGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF789

Protein Analysis

918

Amino Acids

101.56

Weight (kDa)

6.47

Isoelectric Point (pI)

51.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF789 PF05623 601 - 913 2.8e-62 Protein of unknown function (DUF789)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0016851)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g18430 FvH4_5g18430 FvH4_5g18430
rosa_chinensis RchiOBHm_Chr7g0177041
rosa_laevigata RLG00000005561
rosa_multiflora Rmu_sc0005310.1_g000030
rosa_roxburghii Rroxscaffold_3G00276160
rosa_rugosa Rorug06G0403000 Rorug06G0403100
rosa_samantha Rh7AG002700 Rh7BG003000 Rh7CG002300 Rh7DG002800
rosa_wichuraiana Rw7G000220

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1859, 2619
Acc36I ACCTGC 2 cut(s) 497, 859
Acc65I GGTACC 1 cut(s) 1888
AccB1I GGYRCC 3 cut(s) 638, 1393, 1888
AccB7I CCANNNNNTGG 2 cut(s) 1390, 2373
AccIII TCCGGA 2 cut(s) 2082, 2722
AciI CCGC 5 cut(s) 97, 122, 341, 651, 2429
AclWI GGATC 7 cut(s) 259, 1381, 1406, 1419, 2162, 2318, 2364
AcsI RAATTY 7 cut(s) 74, 241, 1077, 1314, 1672, 1997, 2005
AcuI CTGAAG 5 cut(s) 1259, 1545, 1785, 2136, 2516
AcyI GRCGYC 1 cut(s) 2749
AfaI GTAC 6 cut(s) 238, 882, 1286, 1449, 1627, 1890
AfiI CCNNNNNNNGG 9 cut(s) 347, 785, 857, 1205, 1370, 1390, 2373, 2525, 2603
AjnI CCWGG 6 cut(s) 1184, 1414, 1884, 2372, 2596, 2602
AloI GAACNNNNNNTCC 2 cut(s) 2717, 2749
Alw21I GWGCWC 1 cut(s) 262
Alw26I GTCTC 7 cut(s) 397, 397, 1554, 1910, 2122, 2245, 2493
AlwI GGATC 7 cut(s) 259, 1381, 1406, 1419, 2162, 2318, 2364
AlwNI CAGNNNCTG 4 cut(s) 254, 1493, 2159, 2373
Ama87I CYCGRG 1 cut(s) 261
Aor13HI TCCGGA 2 cut(s) 2082, 2722
AoxI GGCC 3 cut(s) 740, 2430, 2600
ApeKI GCWGC 5 cut(s) 328, 381, 1350, 1493, 1658
ApoI RAATTY 7 cut(s) 74, 241, 1077, 1314, 1672, 1997, 2005
Asp700I GAANNNNTTC 2 cut(s) 1770, 1812
Asp718I GGTACC 1 cut(s) 1888
AspS9I GGNCC 4 cut(s) 656, 740, 1790, 2600
AsuHPI GGTGA 4 cut(s) 277, 1271, 1839, 2303
AsuII TTCGAA 1 cut(s) 2141
AvaI CYCGRG 1 cut(s) 261
AvaII GGWCC 2 cut(s) 656, 1790
BaeGI GKGCMC 3 cut(s) 735, 1398, 1753
BamHI GGATCC 1 cut(s) 1411
BanI GGYRCC 3 cut(s) 638, 1393, 1888
BarI GAAGNNNNNNTAC 2 cut(s) 831, 863
BbsI GAAGAC 1 cut(s) 2522
Bbv12I GWGCWC 1 cut(s) 262
BbvCI CCTCAGC 1 cut(s) 2244
BbvI GCAGC 5 cut(s) 340, 393, 1362, 1480, 1670
BccI CCATC 5 cut(s) 1040, 1105, 1470, 2308, 2370
BceAI ACGGC 1 cut(s) 2676
BciT130I CCWGG 6 cut(s) 1186, 1416, 1886, 2374, 2598, 2604
BciVI GTATCC 3 cut(s) 935, 2400, 2403
BclI TGATCA 1 cut(s) 2293
BcoDI GTCTC 7 cut(s) 397, 397, 1554, 1910, 2122, 2245, 2493
BfaI CTAG 5 cut(s) 1901, 2336, 2651, 2745, 2755
BfmI CTRYAG 5 cut(s) 490, 672, 1906, 2089, 2467
BfuAI ACCTGC 2 cut(s) 497, 859
BfuI GTATCC 3 cut(s) 935, 2400, 2403
BglII AGATCT 2 cut(s) 1687, 2347
BisI GCNGC 7 cut(s) 123, 329, 382, 1351, 1494, 1659, 2430
BlsI GCNGC 7 cut(s) 124, 330, 383, 1352, 1495, 1660, 2431
Bme1390I CCNGG 6 cut(s) 1186, 1416, 1886, 2374, 2598, 2604
Bme18I GGWCC 2 cut(s) 656, 1790
BmeT110I CYCGRG 1 cut(s) 261
BmgT120I GGNCC 4 cut(s) 656, 740, 1790, 2600
BmiI GGNNCC 6 cut(s) 640, 1395, 1413, 1883, 1890, 2564
BmrFI CCNGG 6 cut(s) 1186, 1416, 1886, 2374, 2598, 2604
BmrI ACTGGG 3 cut(s) 1359, 1826, 2027
BmuI ACTGGG 3 cut(s) 1359, 1826, 2027
BpiI GAAGAC 1 cut(s) 2522
BplI GAGNNNNNCTC 4 cut(s) 913, 945, 1465, 1497
BpmI CTGGAG 2 cut(s) 1578, 2502
Bpu10I CCTNAGC 2 cut(s) 2244, 2547
Bpu14I TTCGAA 1 cut(s) 2141
BpuEI CTTGAG 1 cut(s) 487
BsaBI GATNNNNATC 1 cut(s) 2361
BsaHI GRCGYC 1 cut(s) 2749
BsaJI CCNNGG 4 cut(s) 1239, 1415, 2570, 2597
BsaWI WCCGGW 3 cut(s) 965, 2082, 2722
BsaXI ACNNNNNCTCC 2 cut(s) 294, 324
Bsc4I CCNNNNNNNGG 9 cut(s) 347, 785, 857, 1205, 1370, 1390, 2373, 2525, 2603
Bse3DI GCAATG 4 cut(s) 170, 218, 223, 773
Bse8I GATNNNNATC 1 cut(s) 2361
BseAI TCCGGA 2 cut(s) 2082, 2722
BseBI CCWGG 6 cut(s) 1186, 1416, 1886, 2374, 2598, 2604
BseDI CCNNGG 4 cut(s) 1239, 1415, 2570, 2597
BseGI GGATG 9 cut(s) 101, 1624, 1826, 1943, 2362, 2506, 2557, 2663, 2719
BseJI GATNNNNATC 1 cut(s) 2361
BseLI CCNNNNNNNGG 9 cut(s) 347, 785, 857, 1205, 1370, 1390, 2373, 2525, 2603
BseMI GCAATG 4 cut(s) 170, 218, 223, 773
BseMII CTCAG 8 cut(s) 261, 771, 885, 1059, 1578, 1698, 2258, 2561
BseRI GAGGAG 1 cut(s) 2648
BseSI GKGCMC 3 cut(s) 735, 1398, 1753
BseXI GCAGC 5 cut(s) 340, 393, 1362, 1480, 1670
BsgI GTGCAG 2 cut(s) 347, 1301
BshFI GGCC 3 cut(s) 742, 2432, 2602
BshNI GGYRCC 3 cut(s) 638, 1393, 1888
BsiHKAI GWGCWC 1 cut(s) 262
BsiHKCI CYCGRG 1 cut(s) 261
BsiSI CCGG 3 cut(s) 966, 2083, 2723
BslFI GGGAC 3 cut(s) 882, 1432, 2028
BslI CCNNNNNNNGG 9 cut(s) 347, 785, 857, 1205, 1370, 1390, 2373, 2525, 2603
BsmAI GTCTC 7 cut(s) 397, 397, 1554, 1910, 2122, 2245, 2493
BsmBI CGTCTC 1 cut(s) 1554
BsmFI GGGAC 3 cut(s) 882, 1432, 2028
BsmI GAATGC 2 cut(s) 1699, 2561
BsnI GGCC 3 cut(s) 742, 2432, 2602
BsoBI CYCGRG 1 cut(s) 261
Bsp119I TTCGAA 1 cut(s) 2141
Bsp1286I GDGCHC 4 cut(s) 262, 735, 1398, 1753
Bsp13I TCCGGA 2 cut(s) 2082, 2722
Bsp1407I TGTACA 1 cut(s) 1447
BspACI CCGC 5 cut(s) 97, 122, 341, 651, 2429
BspANI GGCC 3 cut(s) 742, 2432, 2602
BspCNI CTCAG 8 cut(s) 260, 772, 886, 1060, 1579, 1699, 2257, 2560
BspEI TCCGGA 2 cut(s) 2082, 2722
BspHI TCATGA 3 cut(s) 1051, 1840, 1912
BspLI GGNNCC 6 cut(s) 640, 1395, 1413, 1883, 1890, 2564
BspMAI CTGCAG 2 cut(s) 494, 1910
BspMI ACCTGC 2 cut(s) 497, 859
BspPI GGATC 7 cut(s) 259, 1381, 1406, 1419, 2162, 2318, 2364
BspQI GCTCTTC 1 cut(s) 1629
BspT104I TTCGAA 1 cut(s) 2141
BspT107I GGYRCC 3 cut(s) 638, 1393, 1888
BsrDI GCAATG 4 cut(s) 170, 218, 223, 773
BsrGI TGTACA 1 cut(s) 1447
BssECI CCNNGG 4 cut(s) 1239, 1415, 2570, 2597
BssNI GRCGYC 1 cut(s) 2749
BssT1I CCWWGG 2 cut(s) 1239, 2570
Bst2UI CCWGG 6 cut(s) 1186, 1416, 1886, 2374, 2598, 2604
Bst4CI ACNGT 9 cut(s) 197, 400, 550, 719, 737, 1028, 1043, 2590, 2615
Bst6I CTCTTC 2 cut(s) 593, 1629
BstACI GRCGYC 1 cut(s) 2749
BstAPI GCANNNNNTGC 1 cut(s) 2042
BstAUI TGTACA 1 cut(s) 1447
BstBI TTCGAA 1 cut(s) 2141
BstC8I GCNNGC 5 cut(s) 345, 1341, 1464, 1744, 2427
BstF5I GGATG 9 cut(s) 101, 1624, 1826, 1943, 2362, 2506, 2557, 2663, 2719
BstMAI GTCTC 7 cut(s) 397, 397, 1554, 1910, 2122, 2245, 2493
BstMWI GCNNNNNNNGC 9 cut(s) 131, 645, 739, 1279, 1748, 1757, 1766, 2042, 2051
BstNI CCWGG 6 cut(s) 1186, 1416, 1886, 2374, 2598, 2604
BstNSI RCATGY 4 cut(s) 667, 1067, 1597, 1746
BstSCI CCNGG 6 cut(s) 1184, 1414, 1884, 2372, 2596, 2602
BstSFI CTRYAG 5 cut(s) 490, 672, 1906, 2089, 2467
BstSLI GKGCMC 3 cut(s) 735, 1398, 1753
BstV1I GCAGC 5 cut(s) 340, 393, 1362, 1480, 1670
BstV2I GAAGAC 1 cut(s) 2522
BstX2I RGATCY 7 cut(s) 251, 1373, 1411, 1687, 2323, 2347, 2369
BstXI CCANNNNNNTGG 1 cut(s) 2453
BstYI RGATCY 7 cut(s) 251, 1373, 1411, 1687, 2323, 2347, 2369
BsuI GTATCC 3 cut(s) 935, 2400, 2403
BsuRI GGCC 3 cut(s) 742, 2432, 2602
BtsCI GGATG 9 cut(s) 101, 1624, 1826, 1943, 2362, 2506, 2557, 2663, 2719
BtsI GCAGTG 2 cut(s) 499, 1737
BtsIMutI CAGTG 7 cut(s) 499, 724, 733, 1048, 1737, 1782, 2388
BveI ACCTGC 2 cut(s) 497, 859
Cac8I GCNNGC 5 cut(s) 345, 1341, 1464, 1744, 2427
CaiI CAGNNNCTG 4 cut(s) 254, 1493, 2159, 2373
CciI TCATGA 3 cut(s) 1051, 1840, 1912
Cfr13I GGNCC 4 cut(s) 656, 740, 1790, 2600
CseI GACGC 2 cut(s) 272, 2738
CsiI ACCWGGT 1 cut(s) 1884
Csp6I GTAC 6 cut(s) 237, 881, 1285, 1448, 1626, 1889
CspCI CAANNNNNGTGG 2 cut(s) 691, 726
CviQI GTAC 6 cut(s) 237, 881, 1285, 1448, 1626, 1889
DraI TTTAAA 2 cut(s) 79, 1023
Eam1104I CTCTTC 2 cut(s) 593, 1629
EarI CTCTTC 2 cut(s) 593, 1629
Eco130I CCWWGG 2 cut(s) 1239, 2570
Eco47I GGWCC 2 cut(s) 656, 1790
Eco57I CTGAAG 5 cut(s) 1259, 1545, 1785, 2136, 2516
Eco88I CYCGRG 1 cut(s) 261
EcoRI GAATTC 1 cut(s) 1314
EcoRII CCWGG 6 cut(s) 1184, 1414, 1884, 2372, 2596, 2602
EcoT14I CCWWGG 2 cut(s) 1239, 2570
EcoT22I ATGCAT 5 cut(s) 21, 818, 987, 1670, 1744
ErhI CCWWGG 2 cut(s) 1239, 2570
Esp3I CGTCTC 1 cut(s) 1554
FalI AAGNNNNNCTT 6 cut(s) 682, 714, 1414, 1446, 1635, 1667
FaqI GGGAC 3 cut(s) 882, 1432, 2028
FauNDI CATATG 1 cut(s) 433
FbaI TGATCA 1 cut(s) 2293
Fnu4HI GCNGC 7 cut(s) 123, 329, 382, 1351, 1494, 1659, 2430
FokI GGATG 9 cut(s) 88, 1631, 1813, 1950, 2349, 2513, 2564, 2650, 2706
Fsp4HI GCNGC 7 cut(s) 123, 329, 382, 1351, 1494, 1659, 2430
FspBI CTAG 5 cut(s) 1901, 2336, 2651, 2745, 2755
GluI GCNGC 7 cut(s) 123, 329, 382, 1351, 1494, 1659, 2430
GsuI CTGGAG 2 cut(s) 1578, 2502
HaeIII GGCC 3 cut(s) 742, 2432, 2602
HapII CCGG 3 cut(s) 966, 2083, 2723
HgaI GACGC 2 cut(s) 272, 2738
Hin1I GRCGYC 1 cut(s) 2749
HincII GTYRAC 2 cut(s) 571, 2181
HindII GTYRAC 2 cut(s) 571, 2181
HindIII AAGCTT 3 cut(s) 629, 1138, 1649
HpaI GTTAAC 1 cut(s) 2181
HpaII CCGG 3 cut(s) 966, 2083, 2723
HphI GGTGA 4 cut(s) 277, 1271, 1839, 2303
Hpy166II GTNNAC 5 cut(s) 571, 881, 1782, 2181, 2713
Hpy8I GTNNAC 5 cut(s) 571, 881, 1782, 2181, 2713
Hpy99I CGWCG 1 cut(s) 2754
HpyAV CCTTC 4 cut(s) 1066, 1250, 1298, 2443
HpyCH4III ACNGT 9 cut(s) 197, 400, 550, 719, 737, 1028, 1043, 2590, 2615
HpyCH4IV ACGT 1 cut(s) 1563
HpyF10VI GCNNNNNNNGC 9 cut(s) 131, 645, 739, 1279, 1748, 1757, 1766, 2042, 2051
HpySE526I ACGT 1 cut(s) 1563
Hsp92I GRCGYC 1 cut(s) 2749
Kpn2I TCCGGA 2 cut(s) 2082, 2722
KpnI GGTACC 1 cut(s) 1892
Ksp22I TGATCA 1 cut(s) 2293
KspAI GTTAAC 1 cut(s) 2181
LguI GCTCTTC 1 cut(s) 1629
LmnI GCTCC 6 cut(s) 653, 1968, 2059, 2085, 2161, 2635
Lsp1109I GCAGC 5 cut(s) 340, 393, 1362, 1480, 1670
MabI ACCWGGT 1 cut(s) 1884
MaeI CTAG 5 cut(s) 1901, 2336, 2651, 2745, 2755
MaeII ACGT 1 cut(s) 1563
MaeIII GTNAC 6 cut(s) 713, 971, 1564, 2201, 2537, 2590
MfeI CAATTG 2 cut(s) 1629, 1794
MflI RGATCY 7 cut(s) 251, 1373, 1411, 1687, 2323, 2347, 2369
MhlI GDGCHC 4 cut(s) 262, 735, 1398, 1753
MlyI GAGTC 6 cut(s) 952, 983, 1474, 1718, 2240, 2495
MmeI TCCRAC 2 cut(s) 1959, 2351
Mph1103I ATGCAT 5 cut(s) 21, 818, 987, 1670, 1744
MroI TCCGGA 2 cut(s) 2082, 2722
MroXI GAANNNNTTC 2 cut(s) 1770, 1812
MseI TTAA 7 cut(s) 78, 147, 1022, 1406, 1653, 2180, 2609
MslI CAYNNNNRTG 3 cut(s) 828, 876, 951
MspA1I CMGCKG 2 cut(s) 653, 1466
MspI CCGG 3 cut(s) 966, 2083, 2723
MspR9I CCNGG 6 cut(s) 1186, 1416, 1886, 2374, 2598, 2604
MssI GTTTAAAC 1 cut(s) 1023
MunI CAATTG 2 cut(s) 1629, 1794
Mva1269I GAATGC 2 cut(s) 1699, 2561
MvaI CCWGG 6 cut(s) 1186, 1416, 1886, 2374, 2598, 2604
MwoI GCNNNNNNNGC 9 cut(s) 131, 645, 739, 1279, 1748, 1757, 1766, 2042, 2051
NdeI CATATG 1 cut(s) 433
NlaIV GGNNCC 6 cut(s) 640, 1395, 1413, 1883, 1890, 2564
NmuCI GTSAC 1 cut(s) 2201
NsiI ATGCAT 5 cut(s) 21, 818, 987, 1670, 1744
NspI RCATGY 4 cut(s) 667, 1067, 1597, 1746
NspV TTCGAA 1 cut(s) 2141
PaeI GCATGC 1 cut(s) 1746
PagI TCATGA 3 cut(s) 1051, 1840, 1912
PciSI GCTCTTC 1 cut(s) 1629
PctI GAATGC 2 cut(s) 1699, 2561
PdmI GAANNNNTTC 2 cut(s) 1770, 1812
PfeI GAWTC 8 cut(s) 467, 800, 890, 1004, 1262, 1844, 2071, 2099
PflMI CCANNNNNTGG 2 cut(s) 1390, 2373
PkrI GCNGC 7 cut(s) 124, 330, 383, 1352, 1495, 1660, 2431
PleI GAGTC 6 cut(s) 951, 983, 1474, 1717, 2239, 2494
PmeI GTTTAAAC 1 cut(s) 1023
PpsI GAGTC 6 cut(s) 951, 983, 1474, 1717, 2239, 2494
PsiI TTATAA 2 cut(s) 1859, 2619
Psp6I CCWGG 6 cut(s) 1184, 1414, 1884, 2372, 2596, 2602
PspGI CCWGG 6 cut(s) 1184, 1414, 1884, 2372, 2596, 2602
PspN4I GGNNCC 6 cut(s) 640, 1395, 1413, 1883, 1890, 2564
PspPI GGNCC 4 cut(s) 656, 740, 1790, 2600
PstI CTGCAG 2 cut(s) 494, 1910
PstNI CAGNNNCTG 4 cut(s) 254, 1493, 2159, 2373
PsuI RGATCY 7 cut(s) 251, 1373, 1411, 1687, 2323, 2347, 2369
PvuII CAGCTG 1 cut(s) 1466
RsaI GTAC 6 cut(s) 238, 882, 1286, 1449, 1627, 1890
RsaNI GTAC 6 cut(s) 237, 881, 1285, 1448, 1626, 1889
RseI CAYNNNNRTG 3 cut(s) 828, 876, 951
SapI GCTCTTC 1 cut(s) 1629
SaqAI TTAA 7 cut(s) 78, 147, 1022, 1406, 1653, 2180, 2609
SatI GCNGC 7 cut(s) 123, 329, 382, 1351, 1494, 1659, 2430
Sau96I GGNCC 4 cut(s) 656, 740, 1790, 2600
SchI GAGTC 6 cut(s) 952, 983, 1474, 1718, 2240, 2495
ScrFI CCNGG 6 cut(s) 1186, 1416, 1886, 2374, 2598, 2604
SduI GDGCHC 4 cut(s) 262, 735, 1398, 1753
SexAI ACCWGGT 1 cut(s) 1884
SfcI CTRYAG 5 cut(s) 490, 672, 1906, 2089, 2467
SfuI TTCGAA 1 cut(s) 2141
SinI GGWCC 2 cut(s) 656, 1790
SmiMI CAYNNNNRTG 3 cut(s) 828, 876, 951
SmlI CTYRAG 1 cut(s) 502
SmoI CTYRAG 1 cut(s) 502
SphI GCATGC 1 cut(s) 1746
SsiI CCGC 5 cut(s) 97, 122, 341, 651, 2429
SspI AATATT 1 cut(s) 2225
SspMI CTAG 5 cut(s) 1901, 2336, 2651, 2745, 2755
StyD4I CCNGG 6 cut(s) 1184, 1414, 1884, 2372, 2596, 2602
StyI CCWWGG 2 cut(s) 1239, 2570
TaaI ACNGT 9 cut(s) 197, 400, 550, 719, 737, 1028, 1043, 2590, 2615
TaiI ACGT 1 cut(s) 1566
TaqI TCGA 2 cut(s) 906, 2141
TatI WGTACW 4 cut(s) 236, 880, 1447, 1625
TauI GCSGC 2 cut(s) 125, 2432
TfiI GAWTC 8 cut(s) 467, 800, 890, 1004, 1262, 1844, 2071, 2099
Tru1I TTAA 7 cut(s) 78, 147, 1022, 1406, 1653, 2180, 2609
Tru9I TTAA 7 cut(s) 78, 147, 1022, 1406, 1653, 2180, 2609
TscAI CASTG 7 cut(s) 499, 724, 740, 1048, 1737, 1789, 2388
TseFI GTSAC 1 cut(s) 2201
TseI GCWGC 5 cut(s) 328, 381, 1350, 1493, 1658
Tsp45I GTSAC 1 cut(s) 2201
TspGWI ACGGA 2 cut(s) 151, 1894
TspRI CASTG 7 cut(s) 499, 724, 740, 1048, 1737, 1789, 2388
Van91I CCANNNNNTGG 2 cut(s) 1390, 2373
VpaK11BI GGWCC 2 cut(s) 656, 1790
XapI RAATTY 7 cut(s) 74, 241, 1077, 1314, 1672, 1997, 2005
XbaI TCTAGA 1 cut(s) 2335
XceI RCATGY 4 cut(s) 667, 1067, 1597, 1746
XmnI GAANNNNTTC 2 cut(s) 1770, 1812
XspI CTAG 5 cut(s) 1901, 2336, 2651, 2745, 2755
Zsp2I ATGCAT 5 cut(s) 21, 818, 987, 1670, 1744
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.