Rh7CG002300

Protein of unknown function (DUF789)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0016851
Physical Location & Seq
Forward (+)
233217 .. 241354
8138 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG002300.1

Sequence Viewer

Length: 2511 bp
ATGGATAGTTTGTGTCTGTTCTATACGAAAGGAGTGAATGTTATTAGTCCAAAGGTGCAGCAAGGTTCTCCGCTTGCTGGTTCTCATTGTGGCAAATCATTTACGAATAGCAGCTTTGCTGTCTCAACTGTGAGACACCAATCTCAAAATGAAGTGAGACACCAATCTCGAAATAAAGAATTGGCATATGAAGCTACTAAATCGAATGAGCTTTTCAGGGAATCTTGTCAGAAGTCATTGACCTGCAGTGCTTCCTCAAGTATGATTGAAATTGGTTCTAATTCTAACAACTTGTCAGATACAGTTGGTGGTAGCGAAAAAGTTGACAATGTAAAGAGAAAATCAAGAAAGAAGAGTAGAAAAAAGGGGGAAAAGGGCAAGAAGCTTTCAGGCACCAGTAGCTCCGCTGGACCTCACATGCTGTCTGTAGAATGTGCTGATGAAAGTACAGCTTCCAAAACCTGTGGTAACAGTGGTGGGAGTGGGCACTGTGGGCCATTATCACTTTCAACTACCCCAGAAGTTTCATTGCCTGAGAGTGGGGTCAAGAATGAATCCCCAAAATCATGCATCTCTCATCAAGATGAGCTGGAAGTGTATATACCTTCTGTGGGTAATTTGGGACATCAGAGTGTACTCCAAGATTCTGAGTTTCCCATCGAAGATTGGGTAGGGAGTATCCCTCATATACAAATGAGTCATTGTAATGATCTCCATACCGGAGGTTACTCTGATATGCATGACTCTTTTGTTTCGGAATCAATTTCAGTTGGTTTAAACTGTGATGATAATGACAGTGATGGTCATGATGAAAAACATGCTGAGAAGGAAATTCACAGATTATATGAACCATCAGGTTTCAGTTCCAGAAAGGGATATTTTTCCTGTCAAAGCTTGTTGAATGATGTTGTAAAAATCCATGACAGTAGTGAGAGAACCAGGCATGGTTTTCCAAATAGAGGGGATAAAATGCAACTAAAAGATAGGGTTTCCAAGGAGTTAGAAAGAGAAGGTGAATCAAATCTGCTTCAGGTGCAGTACCTTCCTCATTTACTTTGTAAGGCTGGAATTCAAGCACAGAAAGAAACCTCGCTTGCCGAAAGCAGCAGGGTAAATCCCAGTTCTGGATCTCTAAACCACAAGTTGGTGCCCATTGAGTTAAAGGATCCAGGGACAAGCTCTACTTCCAGTTTAGCTGATGTACATTCGGATAAGCCAGCTGATAAGAGATGGACTCCCACAGATGCTGCTAAAGGGATTACTCAAAATAATAGTTCTGAAGAAGCAGTAGTCTGCGTTGGTCAGAGTTCTGGAGACGTAACTTGTAATCCCGATAAAACTCAGGACATGCTTCTAAAATTAGGGTATCAGGATGCAAGTACAATTGAAGAGCTAAAAGACAAGCTTAATGCAGCTAAATGCATGAATTTTGAACCTAAAGATCTGAATGCAGTTGAACCTGAGTCAAACAGAATAATAGAAGCAGTGAATAATGCATGCAGGGCACAACTGGCATCTGAAGCTGTTCAAATGTTCACTGGTGGTCCAATTGCTGAATTTGAAAGACTTCTTTATCATTCATCCCCAGTTGTTCATGAATCACCCAATTTTATAAGGTGTCAAACTTGCTCACGGAACCAGGTACCAAGATTGCTAGTCTGCAGACATGAGACAACTAACATCTCTTTAGGATGCCTATGGAAGTGGTATCAGAGAAGTGGGAGCTATGGATTGGAAATAAGGGCAGAGGAATTTGGAAATTCAAAGGGACTGGGTGCTGATCGTTGTGCATTTCATGCTTATTTTGCTCCTTACTTGTCAGCGATTCAGCTTTTCCGGAGCTGTAGGAGTGATTCAGTCTGTAATGCAGTCTCTATAAACGAGCTGTGTATTTCGAAACAATCTTCAGCTCCTGCCAACGATCCTGTCCAGTTAACTGATACAATGAGGTCAAGTGACTTGGAACTGCTTTTTGAATATTTTGAGTCTGAACAGCCTCAGCAGAGACAACCTTTGTATGACAAGATAAAGGAACTGATTAGAGGTGATCAACCATCATATTCAAATGTTTATGGAGATCCAACTACTCTAGAAACGATAGATCTAAATGATCTCCATCCCAGATCCTGGTATTCAGTGGCATGGTATCCTATTTACAGGATACCTCATGGAAACTTGCGTGCGGCCTTCTTGACTTACCATTCTCTTGGTCATTTGGTCTGTAGAAGTGCCAATTTTGAGTCTCCAAGTGTGGATGCGTGTATAGTATCTCCAGTTGTGGGTCTTCAGAGTTACAATGCTCAGGATGAATGCTGGTTCCAGCCAAGGCACTCGCAGACAACTGTAACACCAGGGCCAGGCTTAAACTGTTATAATGGAGTTTTGGAGGAGCGTTTGAGAACACTTGAGGAAACGGCATCTCTTATGGCAAGAGCTGTTGTGAAGAAAGGAAGTATGACATCTGTAAACAGGCATCCGGACTATGAGTTCTTCCTTTCTAGGCGTCGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF789

Protein Analysis

836

Amino Acids

92.36

Weight (kDa)

6.1

Isoelectric Point (pI)

51.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF789 PF05623 518 - 831 1.4e-62 Protein of unknown function (DUF789)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0016851)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g18430 FvH4_5g18430 FvH4_5g18430
rosa_chinensis RchiOBHm_Chr7g0177041
rosa_laevigata RLG00000005561
rosa_multiflora Rmu_sc0005310.1_g000030
rosa_roxburghii Rroxscaffold_3G00276160
rosa_rugosa Rorug06G0403000 Rorug06G0403100
rosa_samantha Rh7AG002700 Rh7BG003000 Rh7CG002300 Rh7DG002800
rosa_wichuraiana Rw7G000220

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1613, 2373
Acc36I ACCTGC 1 cut(s) 251
Acc65I GGTACC 1 cut(s) 1642
AccB1I GGYRCC 3 cut(s) 392, 1147, 1642
AccB7I CCANNNNNTGG 2 cut(s) 1144, 2127
AccIII TCCGGA 2 cut(s) 1836, 2476
AciI CCGC 3 cut(s) 71, 405, 2183
AclWI GGATC 6 cut(s) 1135, 1160, 1173, 1916, 2072, 2118
AcsI RAATTY 6 cut(s) 831, 1068, 1426, 1556, 1751, 1759
AcuI CTGAAG 5 cut(s) 1013, 1299, 1539, 1890, 2270
AcyI GRCGYC 1 cut(s) 2503
AfaI GTAC 6 cut(s) 448, 636, 1040, 1203, 1381, 1644
AfiI CCNNNNNNNGG 9 cut(s) 77, 539, 611, 959, 1124, 1144, 2127, 2279, 2357
AjnI CCWGG 6 cut(s) 938, 1168, 1638, 2126, 2350, 2356
AloI GAACNNNNNNTCC 2 cut(s) 2471, 2503
Alw26I GTCTC 8 cut(s) 127, 127, 151, 1308, 1664, 1876, 1999, 2247
AlwI GGATC 6 cut(s) 1135, 1160, 1173, 1916, 2072, 2118
AlwNI CAGNNNCTG 3 cut(s) 1247, 1913, 2127
Aor13HI TCCGGA 2 cut(s) 1836, 2476
AoxI GGCC 3 cut(s) 494, 2184, 2354
ApeKI GCWGC 5 cut(s) 58, 111, 1104, 1247, 1412
ApoI RAATTY 6 cut(s) 831, 1068, 1426, 1556, 1751, 1759
Asp700I GAANNNNTTC 2 cut(s) 1524, 1566
Asp718I GGTACC 1 cut(s) 1642
AspS9I GGNCC 4 cut(s) 410, 494, 1544, 2354
AsuHPI GGTGA 3 cut(s) 1025, 1593, 2057
AsuII TTCGAA 1 cut(s) 1895
AvaII GGWCC 2 cut(s) 410, 1544
BaeGI GKGCMC 3 cut(s) 489, 1152, 1507
BamHI GGATCC 1 cut(s) 1165
BanI GGYRCC 3 cut(s) 392, 1147, 1642
BarI GAAGNNNNNNTAC 2 cut(s) 585, 617
BbsI GAAGAC 1 cut(s) 2276
BbvCI CCTCAGC 1 cut(s) 1998
BbvI GCAGC 5 cut(s) 70, 123, 1116, 1234, 1424
BccI CCATC 6 cut(s) 665, 794, 859, 1224, 2062, 2124
BceAI ACGGC 1 cut(s) 2430
BciT130I CCWGG 6 cut(s) 940, 1170, 1640, 2128, 2352, 2358
BciVI GTATCC 3 cut(s) 689, 2154, 2157
BclI TGATCA 1 cut(s) 2047
BcoDI GTCTC 8 cut(s) 127, 127, 151, 1308, 1664, 1876, 1999, 2247
BfaI CTAG 4 cut(s) 1655, 2090, 2499, 2509
BfmI CTRYAG 5 cut(s) 244, 426, 1660, 1843, 2221
BfuAI ACCTGC 1 cut(s) 251
BfuI GTATCC 3 cut(s) 689, 2154, 2157
BglII AGATCT 2 cut(s) 1441, 2101
BisI GCNGC 6 cut(s) 59, 112, 1105, 1248, 1413, 2184
BlsI GCNGC 6 cut(s) 60, 113, 1106, 1249, 1414, 2185
Bme1390I CCNGG 6 cut(s) 940, 1170, 1640, 2128, 2352, 2358
Bme18I GGWCC 2 cut(s) 410, 1544
BmgT120I GGNCC 4 cut(s) 410, 494, 1544, 2354
BmiI GGNNCC 6 cut(s) 394, 1149, 1167, 1637, 1644, 2318
BmrFI CCNGG 6 cut(s) 940, 1170, 1640, 2128, 2352, 2358
BmrI ACTGGG 3 cut(s) 1113, 1580, 1781
BmsI GCATC 8 cut(s) 579, 1234, 1363, 1523, 1682, 2245, 2426, 2482
BmuI ACTGGG 3 cut(s) 1113, 1580, 1781
BpiI GAAGAC 1 cut(s) 2276
BplI GAGNNNNNCTC 4 cut(s) 667, 699, 1219, 1251
BpmI CTGGAG 2 cut(s) 1332, 2256
Bpu10I CCTNAGC 2 cut(s) 1998, 2301
Bpu14I TTCGAA 1 cut(s) 1895
BpuEI CTTGAG 2 cut(s) 241, 2426
BsaBI GATNNNNATC 1 cut(s) 2115
BsaHI GRCGYC 1 cut(s) 2503
BsaJI CCNNGG 4 cut(s) 993, 1169, 2324, 2351
BsaWI WCCGGW 3 cut(s) 719, 1836, 2476
BsaXI ACNNNNNCTCC 2 cut(s) 24, 54
Bsc4I CCNNNNNNNGG 9 cut(s) 77, 539, 611, 959, 1124, 1144, 2127, 2279, 2357
Bse1I ACTGG 9 cut(s) 396, 1119, 1188, 1515, 1543, 1586, 1776, 1930, 2273
Bse3DI GCAATG 1 cut(s) 527
Bse8I GATNNNNATC 1 cut(s) 2115
BseAI TCCGGA 2 cut(s) 1836, 2476
BseBI CCWGG 6 cut(s) 940, 1170, 1640, 2128, 2352, 2358
BseDI CCNNGG 4 cut(s) 993, 1169, 2324, 2351
BseGI GGATG 7 cut(s) 1378, 1580, 1697, 2116, 2260, 2311, 2473
BseJI GATNNNNATC 1 cut(s) 2115
BseLI CCNNNNNNNGG 9 cut(s) 77, 539, 611, 959, 1124, 1144, 2127, 2279, 2357
BseMI GCAATG 1 cut(s) 527
BseMII CTCAG 7 cut(s) 525, 639, 813, 1355, 1452, 2012, 2315
BseNI ACTGG 9 cut(s) 396, 1119, 1188, 1515, 1543, 1586, 1776, 1930, 2273
BseRI GAGGAG 1 cut(s) 2402
BseSI GKGCMC 3 cut(s) 489, 1152, 1507
BseXI GCAGC 5 cut(s) 70, 123, 1116, 1234, 1424
BsgI GTGCAG 2 cut(s) 77, 1055
BshFI GGCC 3 cut(s) 496, 2186, 2356
BshNI GGYRCC 3 cut(s) 392, 1147, 1642
BsiSI CCGG 3 cut(s) 720, 1837, 2477
BslFI GGGAC 3 cut(s) 636, 1186, 1782
BslI CCNNNNNNNGG 9 cut(s) 77, 539, 611, 959, 1124, 1144, 2127, 2279, 2357
BsmAI GTCTC 8 cut(s) 127, 127, 151, 1308, 1664, 1876, 1999, 2247
BsmBI CGTCTC 1 cut(s) 1308
BsmFI GGGAC 3 cut(s) 636, 1186, 1782
BsmI GAATGC 2 cut(s) 1453, 2315
BsnI GGCC 3 cut(s) 496, 2186, 2356
Bsp119I TTCGAA 1 cut(s) 1895
Bsp1286I GDGCHC 3 cut(s) 489, 1152, 1507
Bsp13I TCCGGA 2 cut(s) 1836, 2476
Bsp1407I TGTACA 1 cut(s) 1201
BspACI CCGC 3 cut(s) 71, 405, 2183
BspANI GGCC 3 cut(s) 496, 2186, 2356
BspCNI CTCAG 7 cut(s) 526, 640, 814, 1354, 1453, 2011, 2314
BspEI TCCGGA 2 cut(s) 1836, 2476
BspHI TCATGA 2 cut(s) 805, 1594
BspLI GGNNCC 6 cut(s) 394, 1149, 1167, 1637, 1644, 2318
BspMAI CTGCAG 2 cut(s) 248, 1664
BspMI ACCTGC 1 cut(s) 251
BspPI GGATC 6 cut(s) 1135, 1160, 1173, 1916, 2072, 2118
BspQI GCTCTTC 1 cut(s) 1383
BspT104I TTCGAA 1 cut(s) 1895
BspT107I GGYRCC 3 cut(s) 392, 1147, 1642
BsrDI GCAATG 1 cut(s) 527
BsrGI TGTACA 1 cut(s) 1201
BsrI ACTGG 9 cut(s) 396, 1119, 1188, 1515, 1543, 1586, 1776, 1930, 2273
BssECI CCNNGG 4 cut(s) 993, 1169, 2324, 2351
BssNI GRCGYC 1 cut(s) 2503
BssT1I CCWWGG 2 cut(s) 993, 2324
Bst2UI CCWGG 6 cut(s) 940, 1170, 1640, 2128, 2352, 2358
Bst4CI ACNGT 9 cut(s) 130, 304, 473, 491, 782, 797, 926, 2344, 2369
Bst6I CTCTTC 2 cut(s) 347, 1383
BstACI GRCGYC 1 cut(s) 2503
BstAPI GCANNNNNTGC 1 cut(s) 1796
BstAUI TGTACA 1 cut(s) 1201
BstBI TTCGAA 1 cut(s) 1895
BstC8I GCNNGC 5 cut(s) 75, 1095, 1218, 1498, 2181
BstDEI CTNAG 7 cut(s) 534, 648, 822, 1341, 1461, 1998, 2301
BstF5I GGATG 7 cut(s) 1378, 1580, 1697, 2116, 2260, 2311, 2473
BstMAI GTCTC 8 cut(s) 127, 127, 151, 1308, 1664, 1876, 1999, 2247
BstMWI GCNNNNNNNGC 9 cut(s) 191, 399, 493, 1033, 1502, 1511, 1520, 1796, 1805
BstNI CCWGG 6 cut(s) 940, 1170, 1640, 2128, 2352, 2358
BstNSI RCATGY 4 cut(s) 421, 821, 1351, 1500
BstSCI CCNGG 6 cut(s) 938, 1168, 1638, 2126, 2350, 2356
BstSFI CTRYAG 5 cut(s) 244, 426, 1660, 1843, 2221
BstSLI GKGCMC 3 cut(s) 489, 1152, 1507
BstV1I GCAGC 5 cut(s) 70, 123, 1116, 1234, 1424
BstV2I GAAGAC 1 cut(s) 2276
BstX2I RGATCY 6 cut(s) 1127, 1165, 1441, 2077, 2101, 2123
BstXI CCANNNNNNTGG 1 cut(s) 2207
BstYI RGATCY 6 cut(s) 1127, 1165, 1441, 2077, 2101, 2123
BsuI GTATCC 3 cut(s) 689, 2154, 2157
BsuRI GGCC 3 cut(s) 496, 2186, 2356
BtsCI GGATG 7 cut(s) 1378, 1580, 1697, 2116, 2260, 2311, 2473
BtsI GCAGTG 2 cut(s) 253, 1491
BtsIMutI CAGTG 7 cut(s) 253, 478, 487, 802, 1491, 1536, 2142
BveI ACCTGC 1 cut(s) 251
Cac8I GCNNGC 5 cut(s) 75, 1095, 1218, 1498, 2181
CaiI CAGNNNCTG 3 cut(s) 1247, 1913, 2127
CciI TCATGA 2 cut(s) 805, 1594
Cfr13I GGNCC 4 cut(s) 410, 494, 1544, 2354
CseI GACGC 1 cut(s) 2492
CsiI ACCWGGT 1 cut(s) 1638
Csp6I GTAC 6 cut(s) 447, 635, 1039, 1202, 1380, 1643
CspCI CAANNNNNGTGG 2 cut(s) 445, 480
CviQI GTAC 6 cut(s) 447, 635, 1039, 1202, 1380, 1643
DdeI CTNAG 7 cut(s) 534, 648, 822, 1341, 1461, 1998, 2301
DraI TTTAAA 1 cut(s) 777
Eam1104I CTCTTC 2 cut(s) 347, 1383
EarI CTCTTC 2 cut(s) 347, 1383
Eco130I CCWWGG 2 cut(s) 993, 2324
Eco47I GGWCC 2 cut(s) 410, 1544
Eco57I CTGAAG 5 cut(s) 1013, 1299, 1539, 1890, 2270
EcoRI GAATTC 1 cut(s) 1068
EcoRII CCWGG 6 cut(s) 938, 1168, 1638, 2126, 2350, 2356
EcoT14I CCWWGG 2 cut(s) 993, 2324
EcoT22I ATGCAT 4 cut(s) 572, 741, 1424, 1498
ErhI CCWWGG 2 cut(s) 993, 2324
Esp3I CGTCTC 1 cut(s) 1308
FalI AAGNNNNNCTT 6 cut(s) 436, 468, 1168, 1200, 1389, 1421
FaqI GGGAC 3 cut(s) 636, 1186, 1782
FauNDI CATATG 1 cut(s) 187
FbaI TGATCA 1 cut(s) 2047
Fnu4HI GCNGC 6 cut(s) 59, 112, 1105, 1248, 1413, 2184
FokI GGATG 7 cut(s) 1385, 1567, 1704, 2103, 2267, 2318, 2460
Fsp4HI GCNGC 6 cut(s) 59, 112, 1105, 1248, 1413, 2184
FspBI CTAG 4 cut(s) 1655, 2090, 2499, 2509
GluI GCNGC 6 cut(s) 59, 112, 1105, 1248, 1413, 2184
GsuI CTGGAG 2 cut(s) 1332, 2256
HaeIII GGCC 3 cut(s) 496, 2186, 2356
HapII CCGG 3 cut(s) 720, 1837, 2477
HgaI GACGC 1 cut(s) 2492
Hin1I GRCGYC 1 cut(s) 2503
HincII GTYRAC 2 cut(s) 325, 1935
HindII GTYRAC 2 cut(s) 325, 1935
HindIII AAGCTT 3 cut(s) 383, 892, 1403
HpaI GTTAAC 1 cut(s) 1935
HpaII CCGG 3 cut(s) 720, 1837, 2477
HphI GGTGA 3 cut(s) 1025, 1593, 2057
Hpy166II GTNNAC 5 cut(s) 325, 635, 1536, 1935, 2467
Hpy8I GTNNAC 5 cut(s) 325, 635, 1536, 1935, 2467
Hpy99I CGWCG 1 cut(s) 2508
HpyAV CCTTC 5 cut(s) 615, 820, 1004, 1052, 2197
HpyCH4III ACNGT 9 cut(s) 130, 304, 473, 491, 782, 797, 926, 2344, 2369
HpyCH4IV ACGT 1 cut(s) 1317
HpyF10VI GCNNNNNNNGC 9 cut(s) 191, 399, 493, 1033, 1502, 1511, 1520, 1796, 1805
HpyF3I CTNAG 7 cut(s) 534, 648, 822, 1341, 1461, 1998, 2301
HpySE526I ACGT 1 cut(s) 1317
Hsp92I GRCGYC 1 cut(s) 2503
Kpn2I TCCGGA 2 cut(s) 1836, 2476
KpnI GGTACC 1 cut(s) 1646
Ksp22I TGATCA 1 cut(s) 2047
KspAI GTTAAC 1 cut(s) 1935
LguI GCTCTTC 1 cut(s) 1383
LmnI GCTCC 6 cut(s) 407, 1722, 1813, 1839, 1915, 2389
Lsp1109I GCAGC 5 cut(s) 70, 123, 1116, 1234, 1424
LweI GCATC 8 cut(s) 579, 1234, 1363, 1523, 1682, 2245, 2426, 2482
MabI ACCWGGT 1 cut(s) 1638
MaeI CTAG 4 cut(s) 1655, 2090, 2499, 2509
MaeII ACGT 1 cut(s) 1317
MaeIII GTNAC 6 cut(s) 467, 725, 1318, 1955, 2291, 2344
MboII GAAGA 8 cut(s) 364, 674, 1292, 1400, 1896, 2276, 2455, 2482
MfeI CAATTG 2 cut(s) 1383, 1548
MflI RGATCY 6 cut(s) 1127, 1165, 1441, 2077, 2101, 2123
MhlI GDGCHC 3 cut(s) 489, 1152, 1507
MlyI GAGTC 6 cut(s) 706, 737, 1228, 1472, 1994, 2249
MmeI TCCRAC 1 cut(s) 2105
Mph1103I ATGCAT 4 cut(s) 572, 741, 1424, 1498
MroI TCCGGA 2 cut(s) 1836, 2476
MroXI GAANNNNTTC 2 cut(s) 1524, 1566
MseI TTAA 5 cut(s) 776, 1160, 1407, 1934, 2363
MslI CAYNNNNRTG 3 cut(s) 582, 630, 705
MspA1I CMGCKG 2 cut(s) 407, 1220
MspI CCGG 3 cut(s) 720, 1837, 2477
MspR9I CCNGG 6 cut(s) 940, 1170, 1640, 2128, 2352, 2358
MssI GTTTAAAC 1 cut(s) 777
MunI CAATTG 2 cut(s) 1383, 1548
Mva1269I GAATGC 2 cut(s) 1453, 2315
MvaI CCWGG 6 cut(s) 940, 1170, 1640, 2128, 2352, 2358
MwoI GCNNNNNNNGC 9 cut(s) 191, 399, 493, 1033, 1502, 1511, 1520, 1796, 1805
NdeI CATATG 1 cut(s) 187
NlaIV GGNNCC 6 cut(s) 394, 1149, 1167, 1637, 1644, 2318
NmuCI GTSAC 1 cut(s) 1955
NsiI ATGCAT 4 cut(s) 572, 741, 1424, 1498
NspI RCATGY 4 cut(s) 421, 821, 1351, 1500
NspV TTCGAA 1 cut(s) 1895
PaeI GCATGC 1 cut(s) 1500
PagI TCATGA 2 cut(s) 805, 1594
PciSI GCTCTTC 1 cut(s) 1383
PctI GAATGC 2 cut(s) 1453, 2315
PdmI GAANNNNTTC 2 cut(s) 1524, 1566
PfeI GAWTC 8 cut(s) 221, 554, 644, 758, 1016, 1598, 1825, 1853
PflMI CCANNNNNTGG 2 cut(s) 1144, 2127
PkrI GCNGC 6 cut(s) 60, 113, 1106, 1249, 1414, 2185
PleI GAGTC 6 cut(s) 705, 737, 1228, 1471, 1993, 2248
PmeI GTTTAAAC 1 cut(s) 777
PpsI GAGTC 6 cut(s) 705, 737, 1228, 1471, 1993, 2248
PsiI TTATAA 2 cut(s) 1613, 2373
Psp6I CCWGG 6 cut(s) 938, 1168, 1638, 2126, 2350, 2356
PspGI CCWGG 6 cut(s) 938, 1168, 1638, 2126, 2350, 2356
PspN4I GGNNCC 6 cut(s) 394, 1149, 1167, 1637, 1644, 2318
PspPI GGNCC 4 cut(s) 410, 494, 1544, 2354
PstI CTGCAG 2 cut(s) 248, 1664
PstNI CAGNNNCTG 3 cut(s) 1247, 1913, 2127
PsuI RGATCY 6 cut(s) 1127, 1165, 1441, 2077, 2101, 2123
PvuII CAGCTG 1 cut(s) 1220
RsaI GTAC 6 cut(s) 448, 636, 1040, 1203, 1381, 1644
RsaNI GTAC 6 cut(s) 447, 635, 1039, 1202, 1380, 1643
RseI CAYNNNNRTG 3 cut(s) 582, 630, 705
SapI GCTCTTC 1 cut(s) 1383
SaqAI TTAA 5 cut(s) 776, 1160, 1407, 1934, 2363
SatI GCNGC 6 cut(s) 59, 112, 1105, 1248, 1413, 2184
Sau96I GGNCC 4 cut(s) 410, 494, 1544, 2354
SchI GAGTC 6 cut(s) 706, 737, 1228, 1472, 1994, 2249
ScrFI CCNGG 6 cut(s) 940, 1170, 1640, 2128, 2352, 2358
SduI GDGCHC 3 cut(s) 489, 1152, 1507
SexAI ACCWGGT 1 cut(s) 1638
SfaNI GCATC 8 cut(s) 579, 1234, 1363, 1523, 1682, 2245, 2426, 2482
SfcI CTRYAG 5 cut(s) 244, 426, 1660, 1843, 2221
SfuI TTCGAA 1 cut(s) 1895
SinI GGWCC 2 cut(s) 410, 1544
SmiMI CAYNNNNRTG 3 cut(s) 582, 630, 705
SmlI CTYRAG 2 cut(s) 256, 2405
SmoI CTYRAG 2 cut(s) 256, 2405
SphI GCATGC 1 cut(s) 1500
SsiI CCGC 3 cut(s) 71, 405, 2183
SspI AATATT 1 cut(s) 1979
SspMI CTAG 4 cut(s) 1655, 2090, 2499, 2509
StyD4I CCNGG 6 cut(s) 938, 1168, 1638, 2126, 2350, 2356
StyI CCWWGG 2 cut(s) 993, 2324
TaaI ACNGT 9 cut(s) 130, 304, 473, 491, 782, 797, 926, 2344, 2369
TaiI ACGT 1 cut(s) 1320
TaqI TCGA 4 cut(s) 169, 203, 660, 1895
TatI WGTACW 4 cut(s) 446, 634, 1201, 1379
TauI GCSGC 1 cut(s) 2186
TfiI GAWTC 8 cut(s) 221, 554, 644, 758, 1016, 1598, 1825, 1853
Tru1I TTAA 5 cut(s) 776, 1160, 1407, 1934, 2363
Tru9I TTAA 5 cut(s) 776, 1160, 1407, 1934, 2363
TscAI CASTG 7 cut(s) 253, 478, 494, 802, 1491, 1543, 2142
TseFI GTSAC 1 cut(s) 1955
TseI GCWGC 5 cut(s) 58, 111, 1104, 1247, 1412
Tsp45I GTSAC 1 cut(s) 1955
TspGWI ACGGA 1 cut(s) 1648
TspRI CASTG 7 cut(s) 253, 478, 494, 802, 1491, 1543, 2142
Van91I CCANNNNNTGG 2 cut(s) 1144, 2127
VpaK11BI GGWCC 2 cut(s) 410, 1544
XapI RAATTY 6 cut(s) 831, 1068, 1426, 1556, 1751, 1759
XbaI TCTAGA 1 cut(s) 2089
XceI RCATGY 4 cut(s) 421, 821, 1351, 1500
XmnI GAANNNNTTC 2 cut(s) 1524, 1566
XspI CTAG 4 cut(s) 1655, 2090, 2499, 2509
Zsp2I ATGCAT 4 cut(s) 572, 741, 1424, 1498
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.