Rh7AG002700

Protein of unknown function (DUF789)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0016851
Physical Location & Seq
Forward (+)
220798 .. 227612
6815 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG002700.1

Sequence Viewer

Length: 2742 bp
ATGCATCGTTGCCTAAGAAGAACCAATAATGATAGCCAAAAATTATTAATCAGAAGAAAATTTAAAGAAAAGAATAGTTTGCGGACATCCTTAGAGGATTGGGAAGCGGCTTCTGTCGCATGGAGGAACTTTAACCATAGGTCTGCTTTCCTTACATTGCTTTCCCTTGAACCTGACGACAGTTTGAGGATTGTTGCACTACCATTGCATTGCCCTGTCAGTACAAATTTCTCAGGATCTGGTGCTCGGGTGAATATGGATAGTTTGCGTCTGTTCTATACGAAAGGAGTGAATGTTATTAGTCCAAAGGTGCAGCAAGGTTCTCCGCTTGCTGGTTCTCAATGTGGCAAATCATTTAAGAATAGCAGCTTTCCTGTCTCAACTGTGAGACACCAATCTCAAAATAAAGAATTGGCATATGAAGCTACTAAATCGAATGAGCTTTTCAGGGAATCTTGTCAGAAGTCATTGACCTGCAGTGCTTCCTCAAGTATGATTGAAATTGGTTCTAATTCTAACAACTTGTCAGATACAGTTGGTGGTAGCGAAAAAGTTGACAATGTAAAGAGAAAATCAAGAAAGAAGAGTAGAAAAAAGGGGCAAAAGGGCAAGAAGCTTTCAGGCACCAGTAGCTCCGCTGGACCTCACATGCTGTCTGTAGAATGTGCTGATGAAAGTTCAGCTTCCGAAACCTGTGGTAACAGTGGTGGGAGTGGGCACTGTGGGCCAGTATCACTTTCAACTACCCCAGAAGTTTCATTGCCTGAGAGTGGGGTCAAGAATGAATCCCCAAAATCATGCATCTCTCATCAAGATGAGCTGGAAGTGTATATACCTTCTGTGGGTAATTTGGGACATCAGAGTGTACTTCAAGATTCTGAGTTTCCCATCGAAGATTGGGTGGGGAGTATCCCTCATATACAAATGAGTCATTGTAATGATCTGCATACCGGAGGTTACTCTGATATGCATGACTCTTTTGTTTCGGATTCAATTTCAGTTGGTTTAAACTGTGATGATAATGACAGTGATGGTCATGATGAAAAACATGCTGAGAAGGAAATTCACAGATTATATGAACCATCAGGTTTCAGTTCCAGAAAGGGATATTTTTCCTGCCAAAGCTTGTTGAATGATGTTGTAAAAATCCATGACAGTAGTGAGAGAACCAGGCATGGTATTCCAAAGAGAGGGGATAAAATGCAACTAAAAGATAGGGTTTCCAAGGAGTTAGAAAGAGAAGGTGAATCAAATCTGCTTCAGGTGCAGTACCTTCCTCATTTACTTTGTAAGGCAGGAATTCAAGCACAGAAAGAAACCTCGCTTGCCGAAAGCAGCAGGGTAAATCCCAGTTCTGGATCTCTAAACCAGAAGTTGGTGCCTATTGAGTTAAAGGATCCAGGGACAAGCTCTACTTCCAGTTTAGCTGATGTACATTCGGATAAGCCAGCTGATAAGAGATGGACTCCCACAGATGCTGCTAAAGGGATTACTCAAAATAATAGTTCTGAAGAAGCAGTAGTCTGCGTTGGTCAGAGTTCTGGAGACGTAACTTGTAATCCTGATAAAACTGAGGACATGCTTCTAAAATTAGGGTATCAGGATGCAAGTACAATTGAAGAGCTAAAAGACAAGCTTAATGCAGCTAAATGCATGAATTTTGAACCTAAAGATCTGAATGCAGTTGAACCTGAGTCAAACAGAATAATAGAAGCAGTGAATAATGCATGCAGGGCACAACTGGCATCTGAAGCTGTTCAAATGTTCACTGGTGGTCCAATTGCTGAATTTGAAAGACTTCTTTATCATTCATCCCCAGTTGTTCATGAATCACCCAATTTTATAAGGTGTCAAACTTGCTCACGGAACCAGGTACCAAGATTGCTAGTCTGCAGACATGAGACAACTAACATCTCTTTAGGATGCCTATGGAAGTGGTATCAGAGAAGTGGGAGCTATGGATTGGAAATAAGGGCAGAGGAATTTGGAAATTCAAAGGGACTGGGTGCTGATCGTTGTGCATTTCATGCTTATTTTGCTCCTTACTTGTCAGCGATTCAGCTTTTCCGGAGCTGTAGGAGTGATTCAGTCTGTAATGCAGTCTCTATAAACGAGCTGTGTATTTTGAAACAATCTTCAGCCCCTGCCAACGATCCTGTCCAGTTAACTGATACAACGAGGTCAAGTGACTTGGAACTGCTTTTTGAATATTTTGAGTCTGAACAGCCTCAGCAGAGACAACCTTTGTATGACAAGATAAAGGAACTGATTAGAGGTGATCAACCATCATATTCAAATGTTTATGGAGATCCAACTACTCTAGAAACGATAGATCTAAATGATCTCCATCCCAGATCCTGGTATTCAGTGGCATGGTATCCTATTTACAGGATACCTCATGGAAACTTGCGTGCGGCCTTCTTGACTTACCATTCTCTTGGTCATTTGGTCTGTAGAAGTGCCAATTTTGAGTCTCCAAGTGTGGATGCGTGTATAGTATCTCCAGTTGTGGGTCTTCAGAGTTACAATGCTCAGGATGAATGCTGGTTCCAGCCAAGGCACTCGCAGACAACTGTAACACCCGAGCCAGGCTTAAACTGTTATAATGGAGTTTTGGAGGAGCGTTTGAGAACACTTGAGGAAACGGCATCTCTTATGGCAAGAGCTGTTGTGAAGAAAGGAAGTATGACATCTGTAAACAGGCATCCGGACTATGAGTTCTTCCTTTCTAGGCGTCGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF789

Protein Analysis

913

Amino Acids

101.23

Weight (kDa)

6.38

Isoelectric Point (pI)

52.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF789 PF05623 595 - 908 5.3e-62 Protein of unknown function (DUF789)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0016851)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g18430 FvH4_5g18430 FvH4_5g18430
rosa_chinensis RchiOBHm_Chr7g0177041
rosa_laevigata RLG00000005561
rosa_multiflora Rmu_sc0005310.1_g000030
rosa_roxburghii Rroxscaffold_3G00276160
rosa_rugosa Rorug06G0403000 Rorug06G0403100
rosa_samantha Rh7AG002700 Rh7BG003000 Rh7CG002300 Rh7DG002800
rosa_wichuraiana Rw7G000220

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1844, 2604
Acc36I ACCTGC 1 cut(s) 482
Acc65I GGTACC 1 cut(s) 1873
AccB1I GGYRCC 3 cut(s) 623, 1378, 1873
AccB7I CCANNNNNTGG 2 cut(s) 1375, 2358
AccIII TCCGGA 2 cut(s) 2067, 2707
AciI CCGC 5 cut(s) 82, 107, 326, 636, 2414
AclWI GGATC 7 cut(s) 244, 1366, 1391, 1404, 2147, 2303, 2349
AcsI RAATTY 8 cut(s) 59, 226, 1062, 1299, 1657, 1787, 1982, 1990
AcuI CTGAAG 5 cut(s) 1244, 1530, 1770, 2121, 2501
AcyI GRCGYC 1 cut(s) 2734
AfaI GTAC 6 cut(s) 223, 867, 1271, 1434, 1612, 1875
AfiI CCNNNNNNNGG 9 cut(s) 332, 770, 842, 1190, 1355, 1375, 2358, 2510, 2588
AjnI CCWGG 5 cut(s) 1169, 1399, 1869, 2357, 2587
AloI GAACNNNNNNTCC 2 cut(s) 2702, 2734
Alw21I GWGCWC 1 cut(s) 247
Alw26I GTCTC 7 cut(s) 382, 382, 1539, 1895, 2107, 2230, 2478
AlwI GGATC 7 cut(s) 244, 1366, 1391, 1404, 2147, 2303, 2349
AlwNI CAGNNNCTG 4 cut(s) 239, 1478, 2144, 2358
Ama87I CYCGRG 2 cut(s) 246, 2582
Aor13HI TCCGGA 2 cut(s) 2067, 2707
AoxI GGCC 2 cut(s) 725, 2415
ApeKI GCWGC 5 cut(s) 313, 366, 1335, 1478, 1643
ApoI RAATTY 8 cut(s) 59, 226, 1062, 1299, 1657, 1787, 1982, 1990
AseI ATTAAT 1 cut(s) 47
Asp700I GAANNNNTTC 2 cut(s) 1755, 1797
Asp718I GGTACC 1 cut(s) 1873
AspS9I GGNCC 3 cut(s) 641, 725, 1775
AsuHPI GGTGA 4 cut(s) 262, 1256, 1824, 2288
AvaI CYCGRG 2 cut(s) 246, 2582
AvaII GGWCC 2 cut(s) 641, 1775
BaeGI GKGCMC 2 cut(s) 720, 1738
BamHI GGATCC 1 cut(s) 1396
BanI GGYRCC 3 cut(s) 623, 1378, 1873
BarI GAAGNNNNNNTAC 2 cut(s) 816, 848
BbsI GAAGAC 1 cut(s) 2507
Bbv12I GWGCWC 1 cut(s) 247
BbvCI CCTCAGC 1 cut(s) 2229
BbvI GCAGC 5 cut(s) 325, 378, 1347, 1465, 1655
BccI CCATC 6 cut(s) 896, 1025, 1090, 1455, 2293, 2355
BceAI ACGGC 1 cut(s) 2661
BciT130I CCWGG 5 cut(s) 1171, 1401, 1871, 2359, 2589
BciVI GTATCC 3 cut(s) 920, 2385, 2388
BclI TGATCA 1 cut(s) 2278
BcoDI GTCTC 7 cut(s) 382, 382, 1539, 1895, 2107, 2230, 2478
BfaI CTAG 4 cut(s) 1886, 2321, 2730, 2740
BfmI CTRYAG 5 cut(s) 475, 657, 1891, 2074, 2452
BfuAI ACCTGC 1 cut(s) 482
BfuI GTATCC 3 cut(s) 920, 2385, 2388
BglII AGATCT 2 cut(s) 1672, 2332
BisI GCNGC 7 cut(s) 108, 314, 367, 1336, 1479, 1644, 2415
BlsI GCNGC 7 cut(s) 109, 315, 368, 1337, 1480, 1645, 2416
Bme1390I CCNGG 5 cut(s) 1171, 1401, 1871, 2359, 2589
Bme18I GGWCC 2 cut(s) 641, 1775
BmeT110I CYCGRG 2 cut(s) 246, 2582
BmgT120I GGNCC 3 cut(s) 641, 725, 1775
BmiI GGNNCC 6 cut(s) 625, 1380, 1398, 1868, 1875, 2549
BmrFI CCNGG 5 cut(s) 1171, 1401, 1871, 2359, 2589
BmrI ACTGGG 3 cut(s) 1344, 1811, 2012
BmsI GCATC 9 cut(s) 13, 810, 1465, 1594, 1754, 1913, 2476, 2657, 2713
BmuI ACTGGG 3 cut(s) 1344, 1811, 2012
BpiI GAAGAC 1 cut(s) 2507
BplI GAGNNNNNCTC 4 cut(s) 898, 930, 1450, 1482
BpmI CTGGAG 2 cut(s) 1563, 2487
Bpu10I CCTNAGC 2 cut(s) 2229, 2532
BpuEI CTTGAG 2 cut(s) 472, 2657
BsaBI GATNNNNATC 1 cut(s) 2346
BsaHI GRCGYC 1 cut(s) 2734
BsaJI CCNNGG 3 cut(s) 1224, 1400, 2555
BsaWI WCCGGW 3 cut(s) 950, 2067, 2707
BsaXI ACNNNNNCTCC 2 cut(s) 279, 309
Bsc4I CCNNNNNNNGG 9 cut(s) 332, 770, 842, 1190, 1355, 1375, 2358, 2510, 2588
Bse3DI GCAATG 4 cut(s) 155, 203, 208, 758
Bse8I GATNNNNATC 1 cut(s) 2346
BseAI TCCGGA 2 cut(s) 2067, 2707
BseBI CCWGG 5 cut(s) 1171, 1401, 1871, 2359, 2589
BseDI CCNNGG 3 cut(s) 1224, 1400, 2555
BseGI GGATG 8 cut(s) 86, 1609, 1811, 1928, 2347, 2491, 2542, 2704
BseJI GATNNNNATC 1 cut(s) 2346
BseLI CCNNNNNNNGG 9 cut(s) 332, 770, 842, 1190, 1355, 1375, 2358, 2510, 2588
BseMI GCAATG 4 cut(s) 155, 203, 208, 758
BseMII CTCAG 8 cut(s) 246, 756, 870, 1044, 1563, 1683, 2243, 2546
BseRI GAGGAG 1 cut(s) 2633
BseSI GKGCMC 2 cut(s) 720, 1738
BseXI GCAGC 5 cut(s) 325, 378, 1347, 1465, 1655
BsgI GTGCAG 2 cut(s) 332, 1286
BshFI GGCC 2 cut(s) 727, 2417
BshNI GGYRCC 3 cut(s) 623, 1378, 1873
BsiHKAI GWGCWC 1 cut(s) 247
BsiHKCI CYCGRG 2 cut(s) 246, 2582
BsiSI CCGG 3 cut(s) 951, 2068, 2708
BslFI GGGAC 3 cut(s) 867, 1417, 2013
BslI CCNNNNNNNGG 9 cut(s) 332, 770, 842, 1190, 1355, 1375, 2358, 2510, 2588
BsmAI GTCTC 7 cut(s) 382, 382, 1539, 1895, 2107, 2230, 2478
BsmBI CGTCTC 1 cut(s) 1539
BsmFI GGGAC 3 cut(s) 867, 1417, 2013
BsmI GAATGC 2 cut(s) 1684, 2546
BsnI GGCC 2 cut(s) 727, 2417
BsoBI CYCGRG 2 cut(s) 246, 2582
Bsp1286I GDGCHC 3 cut(s) 247, 720, 1738
Bsp13I TCCGGA 2 cut(s) 2067, 2707
Bsp1407I TGTACA 1 cut(s) 1432
BspACI CCGC 5 cut(s) 82, 107, 326, 636, 2414
BspANI GGCC 2 cut(s) 727, 2417
BspCNI CTCAG 8 cut(s) 245, 757, 871, 1045, 1564, 1684, 2242, 2545
BspEI TCCGGA 2 cut(s) 2067, 2707
BspHI TCATGA 2 cut(s) 1036, 1825
BspLI GGNNCC 6 cut(s) 625, 1380, 1398, 1868, 1875, 2549
BspMAI CTGCAG 2 cut(s) 479, 1895
BspMI ACCTGC 1 cut(s) 482
BspPI GGATC 7 cut(s) 244, 1366, 1391, 1404, 2147, 2303, 2349
BspQI GCTCTTC 1 cut(s) 1614
BspT107I GGYRCC 3 cut(s) 623, 1378, 1873
BsrDI GCAATG 4 cut(s) 155, 203, 208, 758
BsrGI TGTACA 1 cut(s) 1432
BssECI CCNNGG 3 cut(s) 1224, 1400, 2555
BssNI GRCGYC 1 cut(s) 2734
BssT1I CCWWGG 2 cut(s) 1224, 2555
Bst2UI CCWGG 5 cut(s) 1171, 1401, 1871, 2359, 2589
Bst6I CTCTTC 2 cut(s) 578, 1614
BstACI GRCGYC 1 cut(s) 2734
BstAPI GCANNNNNTGC 1 cut(s) 2027
BstAUI TGTACA 1 cut(s) 1432
BstC8I GCNNGC 5 cut(s) 330, 1326, 1449, 1729, 2412
BstF5I GGATG 8 cut(s) 86, 1609, 1811, 1928, 2347, 2491, 2542, 2704
BstMAI GTCTC 7 cut(s) 382, 382, 1539, 1895, 2107, 2230, 2478
BstNI CCWGG 5 cut(s) 1171, 1401, 1871, 2359, 2589
BstNSI RCATGY 4 cut(s) 652, 1052, 1582, 1731
BstSCI CCNGG 5 cut(s) 1169, 1399, 1869, 2357, 2587
BstSFI CTRYAG 5 cut(s) 475, 657, 1891, 2074, 2452
BstSLI GKGCMC 2 cut(s) 720, 1738
BstV1I GCAGC 5 cut(s) 325, 378, 1347, 1465, 1655
BstV2I GAAGAC 1 cut(s) 2507
BstX2I RGATCY 7 cut(s) 236, 1358, 1396, 1672, 2308, 2332, 2354
BstXI CCANNNNNNTGG 1 cut(s) 2438
BstYI RGATCY 7 cut(s) 236, 1358, 1396, 1672, 2308, 2332, 2354
BsuI GTATCC 3 cut(s) 920, 2385, 2388
BsuRI GGCC 2 cut(s) 727, 2417
BtsCI GGATG 8 cut(s) 86, 1609, 1811, 1928, 2347, 2491, 2542, 2704
BtsI GCAGTG 2 cut(s) 484, 1722
BtsIMutI CAGTG 7 cut(s) 484, 709, 718, 1033, 1722, 1767, 2373
BveI ACCTGC 1 cut(s) 482
Cac8I GCNNGC 5 cut(s) 330, 1326, 1449, 1729, 2412
CaiI CAGNNNCTG 4 cut(s) 239, 1478, 2144, 2358
CciI TCATGA 2 cut(s) 1036, 1825
Cfr13I GGNCC 3 cut(s) 641, 725, 1775
CseI GACGC 2 cut(s) 257, 2723
CsiI ACCWGGT 1 cut(s) 1869
Csp6I GTAC 6 cut(s) 222, 866, 1270, 1433, 1611, 1874
CviQI GTAC 6 cut(s) 222, 866, 1270, 1433, 1611, 1874
DraI TTTAAA 2 cut(s) 64, 1008
Eam1104I CTCTTC 2 cut(s) 578, 1614
EarI CTCTTC 2 cut(s) 578, 1614
Eco130I CCWWGG 2 cut(s) 1224, 2555
Eco47I GGWCC 2 cut(s) 641, 1775
Eco57I CTGAAG 5 cut(s) 1244, 1530, 1770, 2121, 2501
Eco88I CYCGRG 2 cut(s) 246, 2582
EcoRI GAATTC 1 cut(s) 1299
EcoRII CCWGG 5 cut(s) 1169, 1399, 1869, 2357, 2587
EcoT14I CCWWGG 2 cut(s) 1224, 2555
EcoT22I ATGCAT 5 cut(s) 6, 803, 972, 1655, 1729
ErhI CCWWGG 2 cut(s) 1224, 2555
Esp3I CGTCTC 1 cut(s) 1539
FalI AAGNNNNNCTT 6 cut(s) 667, 699, 1399, 1431, 1620, 1652
FaqI GGGAC 3 cut(s) 867, 1417, 2013
FauNDI CATATG 1 cut(s) 418
FbaI TGATCA 1 cut(s) 2278
Fnu4HI GCNGC 7 cut(s) 108, 314, 367, 1336, 1479, 1644, 2415
FokI GGATG 8 cut(s) 73, 1616, 1798, 1935, 2334, 2498, 2549, 2691
Fsp4HI GCNGC 7 cut(s) 108, 314, 367, 1336, 1479, 1644, 2415
FspBI CTAG 4 cut(s) 1886, 2321, 2730, 2740
GluI GCNGC 7 cut(s) 108, 314, 367, 1336, 1479, 1644, 2415
GsuI CTGGAG 2 cut(s) 1563, 2487
HaeIII GGCC 2 cut(s) 727, 2417
HapII CCGG 3 cut(s) 951, 2068, 2708
HgaI GACGC 2 cut(s) 257, 2723
Hin1I GRCGYC 1 cut(s) 2734
HincII GTYRAC 2 cut(s) 556, 2166
HindII GTYRAC 2 cut(s) 556, 2166
HindIII AAGCTT 3 cut(s) 614, 1123, 1634
HpaI GTTAAC 1 cut(s) 2166
HpaII CCGG 3 cut(s) 951, 2068, 2708
HphI GGTGA 4 cut(s) 262, 1256, 1824, 2288
Hpy166II GTNNAC 5 cut(s) 556, 866, 1767, 2166, 2698
Hpy8I GTNNAC 5 cut(s) 556, 866, 1767, 2166, 2698
Hpy99I CGWCG 1 cut(s) 2739
HpyAV CCTTC 5 cut(s) 846, 1051, 1235, 1283, 2428
HpyCH4IV ACGT 1 cut(s) 1548
HpySE526I ACGT 1 cut(s) 1548
Hsp92I GRCGYC 1 cut(s) 2734
Kpn2I TCCGGA 2 cut(s) 2067, 2707
KpnI GGTACC 1 cut(s) 1877
Ksp22I TGATCA 1 cut(s) 2278
KspAI GTTAAC 1 cut(s) 2166
LguI GCTCTTC 1 cut(s) 1614
LmnI GCTCC 5 cut(s) 638, 1953, 2044, 2070, 2620
Lsp1109I GCAGC 5 cut(s) 325, 378, 1347, 1465, 1655
LweI GCATC 9 cut(s) 13, 810, 1465, 1594, 1754, 1913, 2476, 2657, 2713
MabI ACCWGGT 1 cut(s) 1869
MaeI CTAG 4 cut(s) 1886, 2321, 2730, 2740
MaeII ACGT 1 cut(s) 1548
MaeIII GTNAC 6 cut(s) 698, 956, 1549, 2186, 2522, 2575
MfeI CAATTG 2 cut(s) 1614, 1779
MflI RGATCY 7 cut(s) 236, 1358, 1396, 1672, 2308, 2332, 2354
MhlI GDGCHC 3 cut(s) 247, 720, 1738
MlyI GAGTC 6 cut(s) 937, 968, 1459, 1703, 2225, 2480
MmeI TCCRAC 1 cut(s) 2336
Mph1103I ATGCAT 5 cut(s) 6, 803, 972, 1655, 1729
MroI TCCGGA 2 cut(s) 2067, 2707
MroXI GAANNNNTTC 2 cut(s) 1755, 1797
MseI TTAA 9 cut(s) 47, 63, 132, 357, 1007, 1391, 1638, 2165, 2594
MslI CAYNNNNRTG 3 cut(s) 813, 861, 936
MspA1I CMGCKG 2 cut(s) 638, 1451
MspI CCGG 3 cut(s) 951, 2068, 2708
MspR9I CCNGG 5 cut(s) 1171, 1401, 1871, 2359, 2589
MssI GTTTAAAC 1 cut(s) 1008
MunI CAATTG 2 cut(s) 1614, 1779
Mva1269I GAATGC 2 cut(s) 1684, 2546
MvaI CCWGG 5 cut(s) 1171, 1401, 1871, 2359, 2589
NdeI CATATG 1 cut(s) 418
NlaIV GGNNCC 6 cut(s) 625, 1380, 1398, 1868, 1875, 2549
NmuCI GTSAC 1 cut(s) 2186
NsiI ATGCAT 5 cut(s) 6, 803, 972, 1655, 1729
NspI RCATGY 4 cut(s) 652, 1052, 1582, 1731
PaeI GCATGC 1 cut(s) 1731
PagI TCATGA 2 cut(s) 1036, 1825
PciSI GCTCTTC 1 cut(s) 1614
PctI GAATGC 2 cut(s) 1684, 2546
PdmI GAANNNNTTC 2 cut(s) 1755, 1797
PfeI GAWTC 8 cut(s) 452, 785, 875, 989, 1247, 1829, 2056, 2084
PflMI CCANNNNNTGG 2 cut(s) 1375, 2358
PkrI GCNGC 7 cut(s) 109, 315, 368, 1337, 1480, 1645, 2416
PleI GAGTC 6 cut(s) 936, 968, 1459, 1702, 2224, 2479
PmeI GTTTAAAC 1 cut(s) 1008
PpsI GAGTC 6 cut(s) 936, 968, 1459, 1702, 2224, 2479
PshBI ATTAAT 1 cut(s) 47
PsiI TTATAA 2 cut(s) 1844, 2604
Psp6I CCWGG 5 cut(s) 1169, 1399, 1869, 2357, 2587
PspGI CCWGG 5 cut(s) 1169, 1399, 1869, 2357, 2587
PspN4I GGNNCC 6 cut(s) 625, 1380, 1398, 1868, 1875, 2549
PspPI GGNCC 3 cut(s) 641, 725, 1775
PstI CTGCAG 2 cut(s) 479, 1895
PstNI CAGNNNCTG 4 cut(s) 239, 1478, 2144, 2358
PsuI RGATCY 7 cut(s) 236, 1358, 1396, 1672, 2308, 2332, 2354
PvuII CAGCTG 1 cut(s) 1451
RsaI GTAC 6 cut(s) 223, 867, 1271, 1434, 1612, 1875
RsaNI GTAC 6 cut(s) 222, 866, 1270, 1433, 1611, 1874
RseI CAYNNNNRTG 3 cut(s) 813, 861, 936
SapI GCTCTTC 1 cut(s) 1614
SaqAI TTAA 9 cut(s) 47, 63, 132, 357, 1007, 1391, 1638, 2165, 2594
SatI GCNGC 7 cut(s) 108, 314, 367, 1336, 1479, 1644, 2415
Sau96I GGNCC 3 cut(s) 641, 725, 1775
SchI GAGTC 6 cut(s) 937, 968, 1459, 1703, 2225, 2480
ScrFI CCNGG 5 cut(s) 1171, 1401, 1871, 2359, 2589
SduI GDGCHC 3 cut(s) 247, 720, 1738
SexAI ACCWGGT 1 cut(s) 1869
SfaNI GCATC 9 cut(s) 13, 810, 1465, 1594, 1754, 1913, 2476, 2657, 2713
SfcI CTRYAG 5 cut(s) 475, 657, 1891, 2074, 2452
SinI GGWCC 2 cut(s) 641, 1775
SmiMI CAYNNNNRTG 3 cut(s) 813, 861, 936
SmlI CTYRAG 2 cut(s) 487, 2636
SmoI CTYRAG 2 cut(s) 487, 2636
SphI GCATGC 1 cut(s) 1731
SsiI CCGC 5 cut(s) 82, 107, 326, 636, 2414
SspI AATATT 1 cut(s) 2210
SspMI CTAG 4 cut(s) 1886, 2321, 2730, 2740
StyD4I CCNGG 5 cut(s) 1169, 1399, 1869, 2357, 2587
StyI CCWWGG 2 cut(s) 1224, 2555
TaiI ACGT 1 cut(s) 1551
TaqI TCGA 2 cut(s) 434, 891
TatI WGTACW 4 cut(s) 221, 865, 1432, 1610
TauI GCSGC 2 cut(s) 110, 2417
TfiI GAWTC 8 cut(s) 452, 785, 875, 989, 1247, 1829, 2056, 2084
Tru1I TTAA 9 cut(s) 47, 63, 132, 357, 1007, 1391, 1638, 2165, 2594
Tru9I TTAA 9 cut(s) 47, 63, 132, 357, 1007, 1391, 1638, 2165, 2594
TscAI CASTG 7 cut(s) 484, 709, 725, 1033, 1722, 1774, 2373
TseFI GTSAC 1 cut(s) 2186
TseI GCWGC 5 cut(s) 313, 366, 1335, 1478, 1643
Tsp45I GTSAC 1 cut(s) 2186
TspGWI ACGGA 1 cut(s) 1879
TspRI CASTG 7 cut(s) 484, 709, 725, 1033, 1722, 1774, 2373
Van91I CCANNNNNTGG 2 cut(s) 1375, 2358
VpaK11BI GGWCC 2 cut(s) 641, 1775
VspI ATTAAT 1 cut(s) 47
XapI RAATTY 8 cut(s) 59, 226, 1062, 1299, 1657, 1787, 1982, 1990
XbaI TCTAGA 1 cut(s) 2320
XceI RCATGY 4 cut(s) 652, 1052, 1582, 1731
XmnI GAANNNNTTC 2 cut(s) 1755, 1797
XspI CTAG 4 cut(s) 1886, 2321, 2730, 2740
Zsp2I ATGCAT 5 cut(s) 6, 803, 972, 1655, 1729
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.