Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0008693

Physical Location & Seq

Genomic Coordinates Forward (+)

10735115 .. 10740807

Gene Structure 5693 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g18670.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2412 bp

ATGTTGGCGTCGCTGAGTATTGGGTTTCTCTTTGGGGCTTTGGCGATCTTGGCCGCGGAAGCCTTGCTACTCTACTACTTCTTCATTATCAAATTAAACCTCAAAACCAAAAAACGCAGAGAGAACCAAGCCCCACCGGATTCTCAGGAAACCCAGCGTCGCCAATCCCTGGAATCGAAGCAGGGAGTAGTTTGGGTGCTAGAACCGGAGAAAGTTCCGAAAAGTTGGCAGGATAGTGTGTCAAGAGAGCAGAGAGTGTCAAGAGAGCAAAAGAGAAAGAAGGAATTCTACGAGGTTTCTCCAGTTAAAAAACATGCAAAATTGAAGAACCAGCTACTCCTTCTTAAGGAATCAGATGGTTCCCAGACAGCAGTTCCGTTAAAGAGCTGCACTATTGAAGCGGTTTCTTCTACGAGTCTTGCTTCTAGAAAATGGGCCAAAAGGTTTCCGTTGAAATTGGAAAGCAAGACCGCCATACTCTACAAGGGAAGTAAGATCTTCTATATATATCTTGAAACTTCGTGGGAGAAAGAATCGTGGTGTAAAGCTCTTCGTTCAGCATCATGTGATGACAAAGAAAAACTTGACCGGTTTGCCAAGTTGCAGGAACAATTTCAATGTTACTTGACATTGTTAAATGCAGGATACCCCTCGTTCACAAAATATTCTGGAGTGGTATCTGCTCCTGAGCCTGCAGATAGGGCAAACAGAGTTGATGGTTCTCCCTCGAAGGTTCGTCTGTTCTTGAAAAAATTCAGTAAGAAAAATGCTAAGGTTGAGCCAGATAACAAGCTGAACTGGACATCATCCTTAGGTCGTGAAGAAAAAAAGATATATGAGAAATTTCGACCATCCCAGGATTCTGTTTCTGTGACTAGCTCGAGCGATCCTAGTCCACCAGTGAAGAGAGCTCAAAGTTTTACTGAAGGGAATACGATCCCGGCTATCCCACCAGCGTCTACCTTAACTCATTGTGGTAGCCAAAGTCATAGTTCTGTCATATCCGATGCAGAGTCTGATGAAAAGCTTAGTAGTGATGAGGGAACACTTTGTTTGAATTTGTTGTTATCACGACTGTTCTTTGACGCCAAAAGTAGCGTGGAGATTAAAAGATCCATACAAGCTCTGATTCAGAGGACATTGTCCAATATGAGGACCCCAAGTTACGTGGGTGATGTGATCTGTACAGACCTTAATATTGGCAATCTCCCACCTTATATACATGGTATGAGAGTCGTCCCCGTGGACATGAGCGATGTGTGGGCGTTGGAAATTGACATTGGATATTATGGTGGTGCAGTGTTAGACGTTGAAACAAGATTAGAAGTTCGTGAATTAGATTTCCCTAAAGGCATTGGGGATGCGGATTCCGATTCAGGCTCTGCTAGGGATATGTCATCCGACCTTTTTGAAGAATTTGAGTATTTTGGAAAGCATTTAAATCTTGTTGAAGGCGCAGGTGATGTAGTAGATCCTAAGGAGGAGTGTGATCCGAAACCAGATGGATTAAAAATCTCTAAGAGCAGTATGTCTGCATCAAGTAATGGATCCCGGTGGAAGTCGCTTCTAAATTCAATAGCCAAACAAGTTTCACAGGTGCCTCTATCTTTGGCAATAAGGATAACATCCCTTCGAGGAACATTGCGGTTACATATTAAGCCACCTCCTTCAGATCGGTTGTGGTTTGGCTTTACATCCATGCCTGATATAGATTTCAACCTGGACTCGTCAGTGGGAGATCACAAGATCACTAGTGGCCGCATAGCTTTGTTTCTGATAAGTCGGTTTAAGGCAGCAATCCGTGAAACCCTAGTGCTTCCAAACTTTGAAAATGTATGCATACCATGGATGCTAGCAGAAAAGGATGACTGGGTACCTCGGAAGACTGCTCCCTTCATATGGGTTAACCAAGAATCGAGTGATTCCCGTACTATTTTCTCAGAAGTACCAACTGAGGAAAAATACAGGACGGAATCTGATGGGGGAACCTCCGCTGATCATTCACAGGGCAAGAATCGTACACTCAAACAAGCCGATTCTGTTGAAAAAACAAGGCATGACCCCATAAATAGGTTAGCCTTTTCAGTGGGTTCCAAGGGTCTGTCAGCTGGGAGTAACAATACGACCAGCCGAGAACTAAGAACCCCATTATTAGTGAATGGTGAACCACAAGAAACTCGCAAAAACAAGCTGGATGATATAGCGGAGAGCCAATCTCCATCAAGGTCTGTAATTTTATTTGATAAACAGAATAGTGTTAACAGTGAAGATGATGAATCAAAGTCAAAGAGGGTGGGGCGAAGAGCAAGAATGCTTGATCTGGGCAAGAAGATGGGGGAGAAATTGGAAGAAAAGAGGCGGAGCATCGAAGAGAAGAGTAGGAACATCGTTGAGAAAATGCGAGGACCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MMM1

Protein Analysis

804

Amino Acids

90.02

Weight (kDa)

9.07

Isoelectric Point (pI)

54.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PH_SMPa	PF23065	60 - 189	1.8e-53	PH domain associated with SMP domain
PDZD8_N	PF26547	536 - 609	8.2e-08	PDZD8 N-terminal TULIPs domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008693)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17820 AT1G73200
fragaria_vesca	FvH4_5g18670 FvH4_5g18670 FvH4_5g18670 FvH4_5g18670
malus_domestica	MD14G1000100.v1.1
prunus_persica	Prupe.5G246400_v2.0.a1 Prupe.5G246400_v2.0.a1
pyrus_communis	pycom49g00010
rosa_chinensis	RchiOBHm_Chr7g0176841
rosa_laevigata	RLG00000005581
rosa_multiflora	Rmu_sc0005162.1_g000006
rosa_roxburghii	Rroxscaffold_3G00276370
rosa_rugosa	Rorug06G0401100 Rorug06G0401100 Rorug06G0401100
rosa_samantha	Rh3CG305600 Rh7AG000400 Rh7BG000700 Rh7CG000400 Rh7DG000600
rosa_wichuraiana	Rw7G000030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1448
Acc36I	ACCTGC	1 cut(s)	1448
Acc65I	GGTACC	1 cut(s)	1873
AccB1I	GGYRCC	2 cut(s)	1597, 1873
AccB7I	CCANNNNNTGG	1 cut(s)	169
AccI	GTMKAC	1 cut(s)	959
AccII	CGCG	1 cut(s)	56
AclWI	GGATC	7 cut(s)	881, 931, 1107, 1466, 1484, 1542, 1555
AcoI	YGGCCR	2 cut(s)	51, 1756
AcsI	RAATTY	6 cut(s)	284, 752, 842, 1057, 1415, 1570
AcuI	CTGAAG	2 cut(s)	945, 1653
AcyI	GRCGYC	2 cut(s)	8, 1086
AfaI	GTAC	5 cut(s)	1186, 1875, 1930, 1947, 2020
AfiI	CCNNNNNNNGG	5 cut(s)	169, 346, 1152, 1899, 2070
AflII	CTTAAG	1 cut(s)	344
AgeI	ACCGGT	1 cut(s)	588
AhlI	ACTAGT	1 cut(s)	1751
AjnI	CCWGG	3 cut(s)	168, 855, 1719
AjuI	GAANNNNNNNTTGG	2 cut(s)	1263, 1295
Alw21I	GWGCWC	1 cut(s)	913
AlwI	GGATC	7 cut(s)	881, 931, 1107, 1466, 1484, 1542, 1555
AlwNI	CAGNNNCTG	2 cut(s)	1016, 1382
Ama87I	CYCGRG	1 cut(s)	880
AoxI	GGCC	3 cut(s)	51, 435, 1756
ApeKI	GCWGC	2 cut(s)	387, 1793
ApoI	RAATTY	6 cut(s)	284, 752, 842, 1057, 1415, 1570
AsiGI	ACCGGT	1 cut(s)	588
Asp700I	GAANNNNTTC	3 cut(s)	284, 612, 752
Asp718I	GGTACC	1 cut(s)	1873
AspLEI	GCGC	1 cut(s)	1457
AspS9I	GGNCC	3 cut(s)	435, 1155, 2405
AsuC2I	CCSGG	2 cut(s)	941, 1552
AsuHPI	GGTGA	3 cut(s)	1184, 1472, 2174
AsuNHI	GCTAGC	1 cut(s)	1852
AvaI	CYCGRG	1 cut(s)	880
AvaII	GGWCC	2 cut(s)	1155, 2405
AxyI	CCTNAGG	2 cut(s)	811, 1476
BamHI	GGATCC	1 cut(s)	1547
BanI	GGYRCC	2 cut(s)	1597, 1873
BanII	GRGCYC	1 cut(s)	913
BarI	GAAGNNNNNNTAC	4 cut(s)	51, 83, 272, 304
BbsI	GAAGAC	1 cut(s)	1889
Bbv12I	GWGCWC	1 cut(s)	913
BbvI	GCAGC	2 cut(s)	374, 1805
BccI	CCATC	7 cut(s)	350, 710, 859, 1496, 1973, 2227, 2326
BciT130I	CCWGG	3 cut(s)	170, 857, 1721
BciVI	GTATCC	1 cut(s)	638
BclI	TGATCA	1 cut(s)	1996
BcnI	CCSGG	2 cut(s)	941, 1552
BcuI	ACTAGT	1 cut(s)	1751
BfaI	CTAG	8 cut(s)	200, 426, 876, 891, 1386, 1752, 1811, 1853
BfmI	CTRYAG	1 cut(s)	693
BfrI	CTTAAG	1 cut(s)	344
BfuAI	ACCTGC	1 cut(s)	1448
BfuI	GTATCC	1 cut(s)	638
BglII	AGATCT	1 cut(s)	495
BisI	GCNGC	4 cut(s)	54, 388, 1759, 1794
BlsI	GCNGC	4 cut(s)	55, 389, 1760, 1795
Bme1390I	CCNGG	5 cut(s)	170, 857, 941, 1552, 1721
Bme18I	GGWCC	2 cut(s)	1155, 2405
BmeT110I	CYCGRG	1 cut(s)	880
BmgT120I	GGNCC	3 cut(s)	435, 1155, 2405
BmiI	GGNNCC	7 cut(s)	361, 1157, 1549, 1599, 1875, 1987, 2092
BmrFI	CCNGG	5 cut(s)	170, 857, 941, 1552, 1721
BmrI	ACTGGG	1 cut(s)	1879
BmsI	GCATC	6 cut(s)	569, 997, 1351, 1544, 1839, 2373
BmtI	GCTAGC	1 cut(s)	1856
BmuI	ACTGGG	1 cut(s)	1879
BpiI	GAAGAC	1 cut(s)	1889
BplI	GAGNNNNNCTC	2 cut(s)	2200, 2232
BpmI	CTGGAG	2 cut(s)	285, 690
Bpu10I	CCTNAGC	2 cut(s)	687, 771
BpuMI	CCSGG	2 cut(s)	941, 1552
BsaAI	YACGTR	1 cut(s)	1168
BsaHI	GRCGYC	2 cut(s)	8, 1086
BsaJI	CCNNGG	7 cut(s)	54, 168, 855, 1242, 1844, 1877, 2094
BsaWI	WCCGGW	3 cut(s)	136, 205, 588
Bsc4I	CCNNNNNNNGG	5 cut(s)	169, 346, 1152, 1899, 2070
Bse118I	RCCGGY	1 cut(s)	588
Bse1I	ACTGG	4 cut(s)	302, 803, 899, 1874
Bse21I	CCTNAGG	2 cut(s)	811, 1476
Bse3DI	GCAATG	1 cut(s)	1640
BseBI	CCWGG	3 cut(s)	170, 857, 1721
BseDI	CCNNGG	7 cut(s)	54, 168, 855, 1242, 1844, 1877, 2094
BseGI	GGATG	9 cut(s)	806, 851, 1366, 1397, 1625, 1694, 1854, 1870, 2200
BseLI	CCNNNNNNNGG	5 cut(s)	169, 346, 1152, 1899, 2070
BseMI	GCAATG	1 cut(s)	1640
BseMII	CTCAG	5 cut(s)	5, 158, 678, 1944, 1953
BseNI	ACTGG	4 cut(s)	302, 803, 899, 1874
BseRI	GAGGAG	1 cut(s)	1496
BseXI	GCAGC	2 cut(s)	374, 1805
BseYI	CCCAGC	2 cut(s)	153, 2108
BsgI	GTGCAG	2 cut(s)	373, 1317
Bsh1236I	CGCG	1 cut(s)	56
BshFI	GGCC	3 cut(s)	53, 437, 1758
BshNI	GGYRCC	2 cut(s)	1597, 1873
BshTI	ACCGGT	1 cut(s)	588
BsiHKAI	GWGCWC	1 cut(s)	913
BsiHKCI	CYCGRG	1 cut(s)	880
BsiSI	CCGG	5 cut(s)	137, 206, 589, 941, 1552
BslFI	GGGAC	1 cut(s)	1223
BslI	CCNNNNNNNGG	5 cut(s)	169, 346, 1152, 1899, 2070
BsmFI	GGGAC	1 cut(s)	1223
BsmI	GAATGC	1 cut(s)	2316
BsnI	GGCC	3 cut(s)	53, 437, 1758
BsoBI	CYCGRG	1 cut(s)	880
Bsp1286I	GDGCHC	1 cut(s)	913
Bsp1407I	TGTACA	1 cut(s)	1184
Bsp19I	CCATGG	1 cut(s)	1844
BspANI	GGCC	3 cut(s)	53, 437, 1758
BspCNI	CTCAG	5 cut(s)	6, 157, 679, 1945, 1952
BspFNI	CGCG	1 cut(s)	56
BspLI	GGNNCC	7 cut(s)	361, 1157, 1549, 1599, 1875, 1987, 2092
BspMAI	CTGCAG	1 cut(s)	697
BspMI	ACCTGC	1 cut(s)	1448
BspOI	GCTAGC	1 cut(s)	1856
BspPI	GGATC	7 cut(s)	881, 931, 1107, 1466, 1484, 1542, 1555
BspQI	GCTCTTC	2 cut(s)	555, 2296
BspT107I	GGYRCC	2 cut(s)	1597, 1873
BspTI	CTTAAG	1 cut(s)	344
BsrDI	GCAATG	1 cut(s)	1640
BsrFI	RCCGGY	1 cut(s)	588
BsrGI	TGTACA	1 cut(s)	1184
BsrI	ACTGG	4 cut(s)	302, 803, 899, 1874
BssAI	RCCGGY	1 cut(s)	588
BssECI	CCNNGG	7 cut(s)	54, 168, 855, 1242, 1844, 1877, 2094
BssNI	GRCGYC	2 cut(s)	8, 1086
BssT1I	CCWWGG	2 cut(s)	1844, 2094
Bst2UI	CCWGG	3 cut(s)	170, 857, 1721
Bst4CI	ACNGT	2 cut(s)	1077, 2264
Bst6I	CTCTTC	5 cut(s)	555, 899, 2296, 2364, 2369
BstACI	GRCGYC	2 cut(s)	8, 1086
BstAFI	CTTAAG	1 cut(s)	344
BstAUI	TGTACA	1 cut(s)	1184
BstBAI	YACGTR	1 cut(s)	1168
BstC8I	GCNNGC	2 cut(s)	693, 1854
BstDSI	CCRYGG	3 cut(s)	54, 1242, 1844
BstENI	CCTNNNNNAGG	1 cut(s)	344
BstF5I	GGATG	9 cut(s)	806, 851, 1366, 1397, 1625, 1694, 1854, 1870, 2200
BstFNI	CGCG	1 cut(s)	56
BstHHI	GCGC	1 cut(s)	1457
BstMWI	GCNNNNNNNGC	3 cut(s)	50, 59, 701
BstNI	CCWGG	3 cut(s)	170, 857, 1721
BstNSI	RCATGY	1 cut(s)	317
BstSCI	CCNGG	5 cut(s)	168, 855, 939, 1550, 1719
BstSFI	CTRYAG	1 cut(s)	693
BstUI	CGCG	1 cut(s)	56
BstV1I	GCAGC	2 cut(s)	374, 1805
BstV2I	GAAGAC	1 cut(s)	1889
BstX2I	RGATCY	4 cut(s)	495, 1112, 1471, 1547
BstYI	RGATCY	4 cut(s)	495, 1112, 1471, 1547
Bsu36I	CCTNAGG	2 cut(s)	811, 1476
BsuI	GTATCC	1 cut(s)	638
BsuRI	GGCC	3 cut(s)	53, 437, 1758
BtgI	CCRYGG	3 cut(s)	54, 1242, 1844
BtgZI	GCGATG	1 cut(s)	1269
BtsCI	GGATG	9 cut(s)	806, 851, 1366, 1397, 1625, 1694, 1854, 1870, 2200
BtsI	GCAGTG	1 cut(s)	1305
BtsIMutI	CAGTG	5 cut(s)	906, 1305, 1737, 2091, 2269
BveI	ACCTGC	1 cut(s)	1448
Cac8I	GCNNGC	2 cut(s)	693, 1854
CaiI	CAGNNNCTG	2 cut(s)	1016, 1382
CfoI	GCGC	1 cut(s)	1457
Cfr10I	RCCGGY	1 cut(s)	588
Cfr13I	GGNCC	3 cut(s)	435, 1155, 2405
Cfr42I	CCGCGG	1 cut(s)	57
CseI	GACGC	3 cut(s)	146, 945, 1094
Csp6I	GTAC	5 cut(s)	1185, 1874, 1929, 1946, 2019
CspAI	ACCGGT	1 cut(s)	588
CspCI	CAANNNNNGTGG	4 cut(s)	1149, 1184, 2274, 2309
CviAII	CATG	8 cut(s)	314, 564, 1223, 1249, 1699, 1845, 2057, 2409
CviQI	GTAC	5 cut(s)	1185, 1874, 1929, 1946, 2019
DraI	TTTAAA	1 cut(s)	1440
EaeI	YGGCCR	2 cut(s)	51, 1756
Eam1104I	CTCTTC	5 cut(s)	555, 899, 2296, 2364, 2369
EarI	CTCTTC	5 cut(s)	555, 899, 2296, 2364, 2369
EciI	GGCGGA	1 cut(s)	2374
Ecl136II	GAGCTC	1 cut(s)	911
Eco130I	CCWWGG	2 cut(s)	1844, 2094
Eco24I	GRGCYC	1 cut(s)	913
Eco47I	GGWCC	2 cut(s)	1155, 2405
Eco53kI	GAGCTC	1 cut(s)	911
Eco57I	CTGAAG	2 cut(s)	945, 1653
Eco81I	CCTNAGG	2 cut(s)	811, 1476
Eco88I	CYCGRG	1 cut(s)	880
EcoICRI	GAGCTC	1 cut(s)	911
EcoNI	CCTNNNNNAGG	1 cut(s)	344
EcoO109I	RGGNCCY	1 cut(s)	1155
EcoRI	GAATTC	1 cut(s)	284
EcoRII	CCWGG	3 cut(s)	168, 855, 1719
EcoT14I	CCWWGG	2 cut(s)	1844, 2094
EcoT22I	ATGCAT	1 cut(s)	1841
EcoT38I	GRGCYC	1 cut(s)	913
ErhI	CCWWGG	2 cut(s)	1844, 2094
FaeI	CATG	8 cut(s)	317, 567, 1226, 1252, 1702, 1848, 2060, 2412
FalI	AAGNNNNNCTT	2 cut(s)	567, 599
FaqI	GGGAC	1 cut(s)	1223
FatI	CATG	8 cut(s)	313, 563, 1222, 1248, 1698, 1844, 2056, 2408
FauNDI	CATATG	1 cut(s)	1898
FbaI	TGATCA	1 cut(s)	1996
FblI	GTMKAC	1 cut(s)	959
Fnu4HI	GCNGC	4 cut(s)	54, 388, 1759, 1794
FokI	GGATG	9 cut(s)	793, 838, 1373, 1384, 1612, 1681, 1861, 1877, 2207
FriOI	GRGCYC	1 cut(s)	913
Fsp4HI	GCNGC	4 cut(s)	54, 388, 1759, 1794
FspBI	CTAG	8 cut(s)	200, 426, 876, 891, 1386, 1752, 1811, 1853
GlaI	GCGC	1 cut(s)	1456
GluI	GCNGC	4 cut(s)	54, 388, 1759, 1794
GsaI	CCCAGC	2 cut(s)	157, 2112
GsuI	CTGGAG	2 cut(s)	285, 690
HaeIII	GGCC	3 cut(s)	53, 437, 1758
HapII	CCGG	5 cut(s)	137, 206, 589, 941, 1552
HgaI	GACGC	3 cut(s)	146, 945, 1094
HhaI	GCGC	1 cut(s)	1457
Hin1I	GRCGYC	2 cut(s)	8, 1086
Hin1II	CATG	8 cut(s)	317, 567, 1226, 1252, 1702, 1848, 2060, 2412
Hin6I	GCGC	1 cut(s)	1455
HinP1I	GCGC	1 cut(s)	1455
HincII	GTYRAC	2 cut(s)	1906, 2260
HindII	GTYRAC	2 cut(s)	1906, 2260
HindIII	AAGCTT	1 cut(s)	1025
HpaI	GTTAAC	2 cut(s)	1906, 2260
HpaII	CCGG	5 cut(s)	137, 206, 589, 941, 1552
HphI	GGTGA	3 cut(s)	1184, 1472, 2174
Hpy166II	GTNNAC	8 cut(s)	657, 896, 960, 1246, 1906, 2021, 2165, 2260
Hpy8I	GTNNAC	8 cut(s)	657, 896, 960, 1246, 1906, 2021, 2165, 2260
Hpy99I	CGWCG	2 cut(s)	13, 162
HpyAV	CCTTC	8 cut(s)	274, 350, 724, 920, 1445, 1640, 1677, 1903
HpyCH4III	ACNGT	2 cut(s)	1077, 2264
HpyCH4IV	ACGT	2 cut(s)	1167, 1308
HpyCH4V	TGCA	9 cut(s)	317, 390, 604, 641, 695, 1010, 1298, 1535, 1839
HpyF10VI	GCNNNNNNNGC	3 cut(s)	50, 59, 701
HpySE526I	ACGT	2 cut(s)	1167, 1308
Hsp92I	GRCGYC	2 cut(s)	8, 1086
Hsp92II	CATG	8 cut(s)	317, 567, 1226, 1252, 1702, 1848, 2060, 2412
HspAI	GCGC	1 cut(s)	1455
KpnI	GGTACC	1 cut(s)	1877
Ksp22I	TGATCA	1 cut(s)	1996
KspAI	GTTAAC	2 cut(s)	1906, 2260
KspI	CCGCGG	1 cut(s)	57
LguI	GCTCTTC	2 cut(s)	555, 2296
LmnI	GCTCC	3 cut(s)	688, 1894, 2361
Lsp1109I	GCAGC	2 cut(s)	374, 1805
LweI	GCATC	6 cut(s)	569, 997, 1351, 1544, 1839, 2373
MaeI	CTAG	8 cut(s)	200, 426, 876, 891, 1386, 1752, 1811, 1853
MaeII	ACGT	2 cut(s)	1167, 1308
MaeIII	GTNAC	5 cut(s)	620, 871, 1163, 1647, 2114
MflI	RGATCY	4 cut(s)	495, 1112, 1471, 1547
MhlI	GDGCHC	1 cut(s)	913
MlyI	GAGTC	4 cut(s)	424, 1022, 1242, 1718
MmeI	TCCRAC	2 cut(s)	1248, 1425
Mph1103I	ATGCAT	1 cut(s)	1841
MroXI	GAANNNNTTC	3 cut(s)	284, 612, 752
MspA1I	CMGCKG	3 cut(s)	56, 1994, 2108
MspCI	CTTAAG	1 cut(s)	344
MspI	CCGG	5 cut(s)	137, 206, 589, 941, 1552
MspR9I	CCNGG	5 cut(s)	170, 857, 941, 1552, 1721
Mva1269I	GAATGC	1 cut(s)	2316
MvaI	CCWGG	3 cut(s)	170, 857, 1721
MvnI	CGCG	1 cut(s)	56
MwoI	GCNNNNNNNGC	3 cut(s)	50, 59, 701
NciI	CCSGG	2 cut(s)	941, 1552
NcoI	CCATGG	1 cut(s)	1844
NdeI	CATATG	1 cut(s)	1898
NheI	GCTAGC	1 cut(s)	1852
NlaIII	CATG	8 cut(s)	317, 567, 1226, 1252, 1702, 1848, 2060, 2412
NlaIV	GGNNCC	7 cut(s)	361, 1157, 1549, 1599, 1875, 1987, 2092
NmeAIII	GCCGAG	1 cut(s)	2156
NmuCI	GTSAC	1 cut(s)	871
NsiI	ATGCAT	1 cut(s)	1841
NspI	RCATGY	1 cut(s)	317
PaeR7I	CTCGAG	1 cut(s)	880
PaqCI	CACCTGC	1 cut(s)	1448
PciSI	GCTCTTC	2 cut(s)	555, 2296
PctI	GAATGC	1 cut(s)	2316
PdmI	GAANNNNTTC	3 cut(s)	284, 612, 752
PflFI	GACNNNGTC	1 cut(s)	1141
PflMI	CCANNNNNTGG	1 cut(s)	169
PinAI	ACCGGT	1 cut(s)	588
PkrI	GCNGC	4 cut(s)	55, 389, 1760, 1795
PleI	GAGTC	4 cut(s)	423, 1021, 1241, 1718
PpsI	GAGTC	4 cut(s)	423, 1021, 1241, 1718
Ppu21I	YACGTR	1 cut(s)	1168
PpuMI	RGGWCCY	1 cut(s)	1155
Psp124BI	GAGCTC	1 cut(s)	913
Psp5II	RGGWCCY	1 cut(s)	1155
Psp6I	CCWGG	3 cut(s)	168, 855, 1719
PspFI	CCCAGC	2 cut(s)	153, 2108
PspGI	CCWGG	3 cut(s)	168, 855, 1719
PspN4I	GGNNCC	7 cut(s)	361, 1157, 1549, 1599, 1875, 1987, 2092
PspPI	GGNCC	3 cut(s)	435, 1155, 2405
PspPPI	RGGWCCY	1 cut(s)	1155
PspXI	VCTCGAGB	1 cut(s)	880
PstI	CTGCAG	1 cut(s)	697
PstNI	CAGNNNCTG	2 cut(s)	1016, 1382
PsuI	RGATCY	4 cut(s)	495, 1112, 1471, 1547
PsyI	GACNNNGTC	1 cut(s)	1141
PvuII	CAGCTG	1 cut(s)	2108
RsaI	GTAC	5 cut(s)	1186, 1875, 1930, 1947, 2020
RsaNI	GTAC	5 cut(s)	1185, 1874, 1929, 1946, 2019
SacI	GAGCTC	1 cut(s)	913
SacII	CCGCGG	1 cut(s)	57
SapI	GCTCTTC	2 cut(s)	555, 2296
SatI	GCNGC	4 cut(s)	54, 388, 1759, 1794
Sau96I	GGNCC	3 cut(s)	435, 1155, 2405
SchI	GAGTC	4 cut(s)	424, 1022, 1242, 1718
ScrFI	CCNGG	5 cut(s)	170, 857, 941, 1552, 1721
SduI	GDGCHC	1 cut(s)	913
SfaNI	GCATC	6 cut(s)	569, 997, 1351, 1544, 1839, 2373
SfcI	CTRYAG	1 cut(s)	693
Sfr274I	CTCGAG	1 cut(s)	880
Sfr303I	CCGCGG	1 cut(s)	57
SgrBI	CCGCGG	1 cut(s)	57
SinI	GGWCC	2 cut(s)	1155, 2405
SlaI	CTCGAG	1 cut(s)	880
SmiI	ATTTAAAT	1 cut(s)	1440
SmlI	CTYRAG	2 cut(s)	344, 880
SmoI	CTYRAG	2 cut(s)	344, 880
SpeI	ACTAGT	1 cut(s)	1751
SspI	AATATT	2 cut(s)	665, 1198
SspMI	CTAG	8 cut(s)	200, 426, 876, 891, 1386, 1752, 1811, 1853
SstI	GAGCTC	1 cut(s)	913
StyD4I	CCNGG	5 cut(s)	168, 855, 939, 1550, 1719
StyI	CCWWGG	2 cut(s)	1844, 2094
SwaI	ATTTAAAT	1 cut(s)	1440
TaaI	ACNGT	2 cut(s)	1077, 2264
TaiI	ACGT	2 cut(s)	1170, 1311
TaqI	TCGA	7 cut(s)	176, 728, 847, 881, 1633, 1916, 2367
TatI	WGTACW	1 cut(s)	1184
TauI	GCSGC	2 cut(s)	56, 1761
TscAI	CASTG	5 cut(s)	906, 1305, 1737, 2091, 2269
TseFI	GTSAC	1 cut(s)	871
TseI	GCWGC	2 cut(s)	387, 1793
Tsp45I	GTSAC	1 cut(s)	871
TspDTI	ATGAA	4 cut(s)	73, 1035, 1885, 2289
TspGWI	ACGGA	4 cut(s)	366, 438, 1790, 1985
TspRI	CASTG	5 cut(s)	906, 1305, 1737, 2091, 2269
Tth111I	GACNNNGTC	1 cut(s)	1141
Van91I	CCANNNNNTGG	1 cut(s)	169
Vha464I	CTTAAG	1 cut(s)	344
VpaK11BI	GGWCC	2 cut(s)	1155, 2405
XagI	CCTNNNNNAGG	1 cut(s)	344
XapI	RAATTY	6 cut(s)	284, 752, 842, 1057, 1415, 1570
XbaI	TCTAGA	1 cut(s)	425
XceI	RCATGY	1 cut(s)	317
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1096
XhoI	CTCGAG	1 cut(s)	880
XmiI	GTMKAC	1 cut(s)	959
XmnI	GAANNNNTTC	3 cut(s)	284, 612, 752
XspI	CTAG	8 cut(s)	200, 426, 876, 891, 1386, 1752, 1811, 1853
Zsp2I	ATGCAT	1 cut(s)	1841

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.