Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0008693

Physical Location & Seq

Genomic Coordinates Forward (+)

67636032 .. 67644838

Gene Structure 8807 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00276370.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2367 bp

ATGTTGCTGTCGTTAAGTATTGGTTTTGTGTTTGGGGCGCTGGCGATTTTGGCCGTGGAAGCCCTGCTACTCTACTTTATCATCAACAGATTACAACACAAAACCAAGAAGCACCAAGAAGCCCTACGAAAATCTCAAGAAATCCAATCCGAGTCAGACCGCCAATCCCTAGAATTCAAGCAGGGAGTAGTTTGGGTTCTAGAACCAGAAAAAGTTCCAAAAAGTGAGCAAAAGAGAAAGAAGGAATTCTACGAGGTTTCTCCTATTAAAAAACATGCAAAAATCAAGAACCAACTACTCATTCTTACAGAATCAGATGGTTCCCAGACAGCCATTCAATTAAAGGGCTGCACTATTGAAGCGGTTTCTTCTACAAGTCTTGCGTCAAGAAAATGGGCCAAAAGGTTCCCGTTAAAATTGGAAAACAAGACCGCCATAATCTACAAGGGAAGTAAAATCTTTTATATTTATCTTGAAACTTCATGGGAGAAGGAATCATGGTGTAAAGCTCTTCGTTCAGCATCATGTGATGACAAAGAAAAACTTGACCAGTTTGCCAAGTTGCAGAAAGAATTTCAATGTTACTTGACATTGTTAAAAGCTGGATACCCCTCATTCATGAAATATTCTGGAGTGTTATCTGCTCCTGAGCCTGCAGATGGGGAAAATAGAATTGATGGTTCTTCCTCGAAAGTTCGTCTGTTCTTGAAAAAATTCACAAAGAAGTATTCTAAGGTTGGCCCAGATAACAAGCTGAGCTGGACTTCATCCTTAGGCCGGGAAGAAAGAAAGATATATGAGAAATTTCGACCATGTCAGGATTCTGTTTCTGCGACTAGCTCGGGAGATGGTCCACCAGTGAAGAGAGCTCAAAGTTTTACTGAAGGGAATTTGGCTATCCCACCATCATCAACCTTAACTCATTCGGGTAGCCAAAGTCATATCTCTGTTGTCTCCGATGCGGATGCTGATGAAAAGTTTAGTAGCGATGAGGGAACACTTTGTTTGAATTTGTTGTTATCAAGGTTGTTCTTTGACGCCAAAAGTAGCATGGAGATGAAAAGATCCATACAAGCTCAGATTCAGAGGACATTGTCCAATATGAGGACCCCAAGTTACATTGGTGATGTGATCTGTACAGACCTTAACATTGGGAATCTCCCACCTTATATACATGGCATGAGAGTTGTCCCTATGGACATGAGTGATGTGTGGGCTTTGGAAGTTGACATTGGATATTATGGTGGTGCGGTGTTAGACGTTGAAACAAGATTGGAAGTTCGTGAATTAGACTTCCCTAAAGGCATTGGGGATTCAGGTTCCGAATCAGGCTCTGTTAGGGATATGTCAACTGATCTTTTTGAAGAATTTGAGTATTTTGGAAAGCATTTAAATCTTGGTGAAGGTGCAGTTGATGCAGTAGAGCCTAAGGAGGAGTGTGGTCCAAAACGTGATGGATCAAAACTCTCTACGAGCAGTATGTCTGCATCAAGTAATGGATCCAGGTGGAAATCGCTTCTAAATTCTATAGCCAAACAAGTTTCACAGGTGCCTCTATCTTTGGCAATAAGGATAACTTCCCTTCGAGGAATATTGCGGTTACATATCAAGCCACCTCCTTCAGATCGCTTGTGGTTTACCTTTACATCCATGCCTGATATAGATTTCAACCTGGACTCATCAGTGGGAGATCACAAGATTACTAGTGGCCGCATCGCTTTGTTTCTGATCAGTCGGCTTAAGGCAGCAATCCGTGAAACCCTAGTGCAACCAAACTTTGAAAGTGTATGCATACCGTGGATGCTAGCAGAAAAGGATGACTGGGTACCACGGAAGATTGCTCCTTTCATATGGGTTAACCAAGAATCCGCAAATGATTCTCCTACAAATTTATGTGAAGTACCATCGGAGGAAACACGCAGGACAGAATCTGGTGGGGGAACCTCTGCTGATCATTCACAGGGCAAGAATCAAAAACTGAAAAAAGCCGAATCTGTTGAAAAAACAATTCCAGAATCCACAAATGTGTTGGCCTTTTCGGTGAGTTCCAATGATCTGTCAACTGGGAGTAGTGATGGGACTAGTCGAGAACTAAGAACCCCATTATTGGTGAATGGTGAAGCACAAGACACGTGCAAAAAGAAGCTAGATGATATACCAGAATGCCAATCTCCGTCGAGGTCTATAATTCTGTTTGATAAACAGAGTAGTCATAACAGTGAAGAGGATGAATCAAAGCCAAAGAGGATGGGGCGAAGAGCAAGAATGCTTGATCTGGGGAAGAAGATGGGGGAGAAATTAGAAGAAAAGAGGCGTACATTTGAAGAGAAGAGTAGGAACATCGTTGAGAAAATGCGAGGACCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MMM1

Protein Analysis

788

Amino Acids

88.12

Weight (kDa)

8.69

Isoelectric Point (pI)

52.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PH_SMPa	PF23065	60 - 176	2.4e-53	PH domain associated with SMP domain
PDZD8_N	PF26547	333 - 426	8e-06	PDZD8 N-terminal TULIPs domain
PDZD8_N	PF26547	520 - 593	2.8e-07	PDZD8 N-terminal TULIPs domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008693)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17820 AT1G73200
fragaria_vesca	FvH4_5g18670 FvH4_5g18670 FvH4_5g18670 FvH4_5g18670
malus_domestica	MD14G1000100.v1.1
prunus_persica	Prupe.5G246400_v2.0.a1 Prupe.5G246400_v2.0.a1
pyrus_communis	pycom49g00010
rosa_chinensis	RchiOBHm_Chr7g0176841
rosa_laevigata	RLG00000005581
rosa_multiflora	Rmu_sc0005162.1_g000006
rosa_roxburghii	Rroxscaffold_3G00276370
rosa_rugosa	Rorug06G0401100 Rorug06G0401100 Rorug06G0401100
rosa_samantha	Rh3CG305600 Rh7AG000400 Rh7BG000700 Rh7CG000400 Rh7DG000600
rosa_wichuraiana	Rw7G000030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1825
AccB1I	GGYRCC	2 cut(s)	1549, 1825
AciI	CCGC	8 cut(s)	160, 362, 432, 962, 1250, 1597, 1711, 1869
AclWI	GGATC	4 cut(s)	1059, 1465, 1494, 1507
AcoI	YGGCCR	2 cut(s)	51, 1708
AcuI	CTGAAG	2 cut(s)	903, 1605
AcvI	CACGTG	1 cut(s)	2133
AcyI	GRCGYC	1 cut(s)	1038
AfaI	GTAC	4 cut(s)	1138, 1827, 1902, 2317
AfiI	CCNNNNNNNGG	4 cut(s)	659, 777, 1104, 2107
AflII	CTTAAG	1 cut(s)	1739
AflIII	ACRYGT	1 cut(s)	2130
AhlI	ACTAGT	2 cut(s)	1703, 2081
AjnI	CCWGG	2 cut(s)	1502, 1671
AjuI	GAANNNNNNNTTGG	4 cut(s)	285, 317, 1215, 1247
AleI	CACNNNNGTG	1 cut(s)	2024
AluBI	AGCT	8 cut(s)	509, 602, 754, 759, 840, 869, 1076, 2146
AluI	AGCT	8 cut(s)	509, 602, 754, 759, 840, 869, 1076, 2146
Alw21I	GWGCWC	1 cut(s)	871
Alw26I	GTCTC	1 cut(s)	958
AlwI	GGATC	4 cut(s)	1059, 1465, 1494, 1507
AlwNI	CAGNNNCTG	2 cut(s)	1334, 1931
Ama87I	CYCGRG	1 cut(s)	841
AoxI	GGCC	6 cut(s)	51, 396, 739, 775, 1708, 2031
ApeKI	GCWGC	2 cut(s)	348, 1745
Asp700I	GAANNNNTTC	3 cut(s)	213, 245, 713
Asp718I	GGTACC	1 cut(s)	1825
AspLEI	GCGC	1 cut(s)	40
AspS9I	GGNCC	6 cut(s)	396, 740, 851, 1107, 1442, 2360
AsuC2I	CCSGG	1 cut(s)	779
AsuHPI	GGTGA	5 cut(s)	1136, 1412, 2053, 2122, 2129
AsuNHI	GCTAGC	1 cut(s)	1804
AvaI	CYCGRG	1 cut(s)	841
AvaII	GGWCC	4 cut(s)	851, 1107, 1442, 2360
AxyI	CCTNAGG	2 cut(s)	772, 1428
BamHI	GGATCC	1 cut(s)	1499
BanI	GGYRCC	2 cut(s)	1549, 1825
BanII	GRGCYC	1 cut(s)	871
BarI	GAAGNNNNNNTAC	4 cut(s)	51, 83, 233, 265
BbrPI	CACGTG	1 cut(s)	2133
Bbv12I	GWGCWC	1 cut(s)	871
BbvI	GCAGC	2 cut(s)	335, 1757
BceAI	ACGGC	1 cut(s)	38
BcgI	CGANNNNNNTGC	2 cut(s)	947, 981
BciT130I	CCWGG	2 cut(s)	1504, 1673
BciVI	GTATCC	1 cut(s)	599
BclI	TGATCA	2 cut(s)	1728, 1951
BcnI	CCSGG	1 cut(s)	779
BcoDI	GTCTC	1 cut(s)	958
BcuI	ACTAGT	2 cut(s)	1703, 2081
BfaI	CTAG	8 cut(s)	170, 200, 837, 1704, 1763, 1805, 2082, 2147
BfmI	CTRYAG	2 cut(s)	654, 1527
BfoI	RGCGCY	1 cut(s)	41
BfrI	CTTAAG	1 cut(s)	1739
BfuI	GTATCC	1 cut(s)	599
BisI	GCNGC	3 cut(s)	349, 1711, 1746
BlpI	GCTNAGC	1 cut(s)	755
BlsI	GCNGC	3 cut(s)	350, 1712, 1747
Bme1390I	CCNGG	3 cut(s)	779, 1504, 1673
Bme18I	GGWCC	4 cut(s)	851, 1107, 1442, 2360
BmeT110I	CYCGRG	1 cut(s)	841
BmgT120I	GGNCC	6 cut(s)	396, 740, 851, 1107, 1442, 2360
BmiI	GGNNCC	8 cut(s)	322, 407, 1109, 1321, 1501, 1551, 1827, 1942
BmrFI	CCNGG	3 cut(s)	779, 1504, 1673
BmrI	ACTGGG	2 cut(s)	1831, 2073
BmsI	GCATC	7 cut(s)	530, 949, 955, 1405, 1496, 1722, 1791
BmtI	GCTAGC	1 cut(s)	1808
BmuI	ACTGGG	2 cut(s)	1831, 2073
BpmI	CTGGAG	1 cut(s)	651
Bpu10I	CCTNAGC	1 cut(s)	648
Bpu1102I	GCTNAGC	1 cut(s)	755
BpuEI	CTTGAG	1 cut(s)	120
BpuMI	CCSGG	1 cut(s)	779
BsaAI	YACGTR	1 cut(s)	2133
BsaHI	GRCGYC	1 cut(s)	1038
BsaJI	CCNNGG	3 cut(s)	54, 1796, 1829
Bsc4I	CCNNNNNNNGG	4 cut(s)	659, 777, 1104, 2107
Bse1I	ACTGG	4 cut(s)	550, 857, 1826, 2068
Bse21I	CCTNAGG	2 cut(s)	772, 1428
BseBI	CCWGG	2 cut(s)	1504, 1673
BseDI	CCNNGG	3 cut(s)	54, 1796, 1829
BseGI	GGATG	7 cut(s)	767, 970, 1646, 1806, 1822, 2233, 2253
BseLI	CCNNNNNNNGG	4 cut(s)	659, 777, 1104, 2107
BseMII	CTCAG	3 cut(s)	639, 746, 1091
BseNI	ACTGG	4 cut(s)	550, 857, 1826, 2068
BseRI	GAGGAG	1 cut(s)	1448
BseXI	GCAGC	2 cut(s)	335, 1757
BsgI	GTGCAG	2 cut(s)	334, 1428
BshFI	GGCC	6 cut(s)	53, 398, 741, 777, 1710, 2033
BshNI	GGYRCC	2 cut(s)	1549, 1825
BsiHKAI	GWGCWC	1 cut(s)	871
BsiHKCI	CYCGRG	1 cut(s)	841
BsiSI	CCGG	1 cut(s)	778
BslFI	GGGAC	2 cut(s)	1175, 2092
BslI	CCNNNNNNNGG	4 cut(s)	659, 777, 1104, 2107
BsmAI	GTCTC	1 cut(s)	958
BsmFI	GGGAC	2 cut(s)	1175, 2092
BsmI	GAATGC	2 cut(s)	2168, 2271
BsnI	GGCC	6 cut(s)	53, 398, 741, 777, 1710, 2033
BsoBI	CYCGRG	1 cut(s)	841
Bsp1286I	GDGCHC	1 cut(s)	871
Bsp1407I	TGTACA	1 cut(s)	1136
Bsp1720I	GCTNAGC	1 cut(s)	755
BspACI	CCGC	8 cut(s)	160, 362, 432, 962, 1250, 1597, 1711, 1869
BspANI	GGCC	6 cut(s)	53, 398, 741, 777, 1710, 2033
BspCNI	CTCAG	3 cut(s)	640, 747, 1090
BspHI	TCATGA	1 cut(s)	618
BspLI	GGNNCC	8 cut(s)	322, 407, 1109, 1321, 1501, 1551, 1827, 1942
BspMAI	CTGCAG	1 cut(s)	658
BspOI	GCTAGC	1 cut(s)	1808
BspPI	GGATC	4 cut(s)	1059, 1465, 1494, 1507
BspQI	GCTCTTC	2 cut(s)	516, 2251
BspT107I	GGYRCC	2 cut(s)	1549, 1825
BspTI	CTTAAG	1 cut(s)	1739
BsrGI	TGTACA	1 cut(s)	1136
BsrI	ACTGG	4 cut(s)	550, 857, 1826, 2068
BssECI	CCNNGG	3 cut(s)	54, 1796, 1829
BssNI	GRCGYC	1 cut(s)	1038
Bst2UI	CCWGG	2 cut(s)	1504, 1673
Bst4CI	ACNGT	2 cut(s)	1797, 2219
Bst6I	CTCTTC	6 cut(s)	516, 857, 2217, 2251, 2319, 2324
BstACI	GRCGYC	1 cut(s)	1038
BstAFI	CTTAAG	1 cut(s)	1739
BstAPI	GCANNNNNTGC	1 cut(s)	1415
BstAUI	TGTACA	1 cut(s)	1136
BstBAI	YACGTR	1 cut(s)	2133
BstC8I	GCNNGC	3 cut(s)	42, 654, 1806
BstDEI	CTNAG	7 cut(s)	648, 732, 755, 772, 1077, 1428, 2093
BstDSI	CCRYGG	3 cut(s)	54, 1796, 1829
BstF5I	GGATG	7 cut(s)	767, 970, 1646, 1806, 1822, 2233, 2253
BstH2I	RGCGCY	1 cut(s)	41
BstHHI	GCGC	1 cut(s)	40
BstMAI	GTCTC	1 cut(s)	958
BstMWI	GCNNNNNNNGC	3 cut(s)	50, 59, 1415
BstNI	CCWGG	2 cut(s)	1504, 1673
BstNSI	RCATGY	1 cut(s)	278
BstSCI	CCNGG	3 cut(s)	777, 1502, 1671
BstSFI	CTRYAG	2 cut(s)	654, 1527
BstV1I	GCAGC	2 cut(s)	335, 1757
BstX2I	RGATCY	2 cut(s)	1064, 1499
BstYI	RGATCY	2 cut(s)	1064, 1499
Bsu36I	CCTNAGG	2 cut(s)	772, 1428
BsuI	GTATCC	1 cut(s)	599
BsuRI	GGCC	6 cut(s)	53, 398, 741, 777, 1710, 2033
BtgI	CCRYGG	3 cut(s)	54, 1796, 1829
BtgZI	GCGATG	2 cut(s)	1002, 1699
BtsCI	GGATG	7 cut(s)	767, 970, 1646, 1806, 1822, 2233, 2253
BtsIMutI	CAGTG	3 cut(s)	864, 1689, 2224
Cac8I	GCNNGC	3 cut(s)	42, 654, 1806
CaiI	CAGNNNCTG	2 cut(s)	1334, 1931
CciI	TCATGA	1 cut(s)	618
CfoI	GCGC	1 cut(s)	40
Cfr13I	GGNCC	6 cut(s)	396, 740, 851, 1107, 1442, 2360
CseI	GACGC	2 cut(s)	372, 1046
Csp6I	GTAC	4 cut(s)	1137, 1826, 1901, 2316
CviQI	GTAC	4 cut(s)	1137, 1826, 1901, 2316
DdeI	CTNAG	7 cut(s)	648, 732, 755, 772, 1077, 1428, 2093
DraI	TTTAAA	1 cut(s)	1392
EaeI	YGGCCR	2 cut(s)	51, 1708
Eam1104I	CTCTTC	6 cut(s)	516, 857, 2217, 2251, 2319, 2324
EarI	CTCTTC	6 cut(s)	516, 857, 2217, 2251, 2319, 2324
Ecl136II	GAGCTC	1 cut(s)	869
Eco24I	GRGCYC	1 cut(s)	871
Eco47I	GGWCC	4 cut(s)	851, 1107, 1442, 2360
Eco53kI	GAGCTC	1 cut(s)	869
Eco57I	CTGAAG	2 cut(s)	903, 1605
Eco72I	CACGTG	1 cut(s)	2133
Eco81I	CCTNAGG	2 cut(s)	772, 1428
Eco88I	CYCGRG	1 cut(s)	841
EcoICRI	GAGCTC	1 cut(s)	869
EcoO109I	RGGNCCY	1 cut(s)	1107
EcoRI	GAATTC	2 cut(s)	173, 245
EcoRII	CCWGG	2 cut(s)	1502, 1671
EcoT22I	ATGCAT	1 cut(s)	1793
EcoT38I	GRGCYC	1 cut(s)	871
FalI	AAGNNNNNCTT	4 cut(s)	528, 560, 1561, 1593
FaqI	GGGAC	2 cut(s)	1175, 2092
FauNDI	CATATG	1 cut(s)	1850
FbaI	TGATCA	2 cut(s)	1728, 1951
Fnu4HI	GCNGC	3 cut(s)	349, 1711, 1746
FokI	GGATG	7 cut(s)	754, 977, 1633, 1813, 1829, 2240, 2260
FriOI	GRGCYC	1 cut(s)	871
Fsp4HI	GCNGC	3 cut(s)	349, 1711, 1746
FspBI	CTAG	8 cut(s)	170, 200, 837, 1704, 1763, 1805, 2082, 2147
GlaI	GCGC	1 cut(s)	39
GluI	GCNGC	3 cut(s)	349, 1711, 1746
GsuI	CTGGAG	1 cut(s)	651
HaeII	RGCGCY	1 cut(s)	41
HaeIII	GGCC	6 cut(s)	53, 398, 741, 777, 1710, 2033
HapII	CCGG	1 cut(s)	778
HgaI	GACGC	2 cut(s)	372, 1046
HhaI	GCGC	1 cut(s)	40
Hin1I	GRCGYC	1 cut(s)	1038
Hin6I	GCGC	1 cut(s)	38
HinP1I	GCGC	1 cut(s)	38
HincII	GTYRAC	4 cut(s)	1228, 1350, 1858, 2061
HindII	GTYRAC	4 cut(s)	1228, 1350, 1858, 2061
HpaI	GTTAAC	1 cut(s)	1858
HpaII	CCGG	1 cut(s)	778
HphI	GGTGA	5 cut(s)	1136, 1412, 2053, 2122, 2129
Hpy166II	GTNNAC	6 cut(s)	854, 1228, 1350, 1638, 1858, 2061
Hpy8I	GTNNAC	6 cut(s)	854, 1228, 1350, 1638, 1858, 2061
Hpy99I	CGWCG	1 cut(s)	2179
HpyAV	CCTTC	6 cut(s)	235, 484, 878, 1397, 1592, 1629
HpyCH4III	ACNGT	2 cut(s)	1797, 2219
HpyCH4IV	ACGT	3 cut(s)	1260, 1450, 2132
HpyF10VI	GCNNNNNNNGC	3 cut(s)	50, 59, 1415
HpyF3I	CTNAG	7 cut(s)	648, 732, 755, 772, 1077, 1428, 2093
HpySE526I	ACGT	3 cut(s)	1260, 1450, 2132
Hsp92I	GRCGYC	1 cut(s)	1038
HspAI	GCGC	1 cut(s)	38
KpnI	GGTACC	1 cut(s)	1829
Ksp22I	TGATCA	2 cut(s)	1728, 1951
KspAI	GTTAAC	1 cut(s)	1858
LguI	GCTCTTC	2 cut(s)	516, 2251
LmnI	GCTCC	2 cut(s)	649, 1846
Lsp1109I	GCAGC	2 cut(s)	335, 1757
LweI	GCATC	7 cut(s)	530, 949, 955, 1405, 1496, 1722, 1791
MaeI	CTAG	8 cut(s)	170, 200, 837, 1704, 1763, 1805, 2082, 2147
MaeII	ACGT	3 cut(s)	1260, 1450, 2132
MaeIII	GTNAC	3 cut(s)	581, 1115, 1599
MflI	RGATCY	2 cut(s)	1064, 1499
MhlI	GDGCHC	1 cut(s)	871
MlyI	GAGTC	2 cut(s)	161, 1670
Mph1103I	ATGCAT	1 cut(s)	1793
MroXI	GAANNNNTTC	3 cut(s)	213, 245, 713
MslI	CAYNNNNRTG	3 cut(s)	1055, 2024, 2217
MspCI	CTTAAG	1 cut(s)	1739
MspI	CCGG	1 cut(s)	778
MspR9I	CCNGG	3 cut(s)	779, 1504, 1673
Mva1269I	GAATGC	2 cut(s)	2168, 2271
MvaI	CCWGG	2 cut(s)	1504, 1673
MwoI	GCNNNNNNNGC	3 cut(s)	50, 59, 1415
NciI	CCSGG	1 cut(s)	779
NdeI	CATATG	1 cut(s)	1850
NheI	GCTAGC	1 cut(s)	1804
NlaIV	GGNNCC	8 cut(s)	322, 407, 1109, 1321, 1501, 1551, 1827, 1942
NsiI	ATGCAT	1 cut(s)	1793
NspI	RCATGY	1 cut(s)	278
OliI	CACNNNNGTG	1 cut(s)	2024
PagI	TCATGA	1 cut(s)	618
PciSI	GCTCTTC	2 cut(s)	516, 2251
PctI	GAATGC	2 cut(s)	2168, 2271
PdmI	GAANNNNTTC	3 cut(s)	213, 245, 713
PflFI	GACNNNGTC	2 cut(s)	813, 1093
PkrI	GCNGC	3 cut(s)	350, 1712, 1747
PleI	GAGTC	2 cut(s)	160, 1670
PmaCI	CACGTG	1 cut(s)	2133
PmlI	CACGTG	1 cut(s)	2133
PpsI	GAGTC	2 cut(s)	160, 1670
Ppu21I	YACGTR	1 cut(s)	2133
PpuMI	RGGWCCY	1 cut(s)	1107
Psp124BI	GAGCTC	1 cut(s)	871
Psp5II	RGGWCCY	1 cut(s)	1107
Psp6I	CCWGG	2 cut(s)	1502, 1671
PspCI	CACGTG	1 cut(s)	2133
PspGI	CCWGG	2 cut(s)	1502, 1671
PspN4I	GGNNCC	8 cut(s)	322, 407, 1109, 1321, 1501, 1551, 1827, 1942
PspPI	GGNCC	6 cut(s)	396, 740, 851, 1107, 1442, 2360
PspPPI	RGGWCCY	1 cut(s)	1107
PsrI	GAACNNNNNNTAC	2 cut(s)	180, 212
PstI	CTGCAG	1 cut(s)	658
PstNI	CAGNNNCTG	2 cut(s)	1334, 1931
PsuI	RGATCY	2 cut(s)	1064, 1499
PsyI	GACNNNGTC	2 cut(s)	813, 1093
RsaI	GTAC	4 cut(s)	1138, 1827, 1902, 2317
RsaNI	GTAC	4 cut(s)	1137, 1826, 1901, 2316
RseI	CAYNNNNRTG	3 cut(s)	1055, 2024, 2217
SacI	GAGCTC	1 cut(s)	871
SapI	GCTCTTC	2 cut(s)	516, 2251
SatI	GCNGC	3 cut(s)	349, 1711, 1746
Sau96I	GGNCC	6 cut(s)	396, 740, 851, 1107, 1442, 2360
SchI	GAGTC	2 cut(s)	161, 1670
ScrFI	CCNGG	3 cut(s)	779, 1504, 1673
SduI	GDGCHC	1 cut(s)	871
SfaNI	GCATC	7 cut(s)	530, 949, 955, 1405, 1496, 1722, 1791
SfcI	CTRYAG	2 cut(s)	654, 1527
SinI	GGWCC	4 cut(s)	851, 1107, 1442, 2360
SmiI	ATTTAAAT	1 cut(s)	1392
SmiMI	CAYNNNNRTG	3 cut(s)	1055, 2024, 2217
SmlI	CTYRAG	2 cut(s)	135, 1739
SmoI	CTYRAG	2 cut(s)	135, 1739
SpeI	ACTAGT	2 cut(s)	1703, 2081
SsiI	CCGC	8 cut(s)	160, 362, 432, 962, 1250, 1597, 1711, 1869
SspI	AATATT	2 cut(s)	626, 1593
SspMI	CTAG	8 cut(s)	170, 200, 837, 1704, 1763, 1805, 2082, 2147
SstI	GAGCTC	1 cut(s)	871
StyD4I	CCNGG	3 cut(s)	777, 1502, 1671
SwaI	ATTTAAAT	1 cut(s)	1392
TaaI	ACNGT	2 cut(s)	1797, 2219
TaiI	ACGT	3 cut(s)	1263, 1453, 2135
TaqI	TCGA	5 cut(s)	689, 808, 1585, 2086, 2177
TatI	WGTACW	1 cut(s)	1136
TauI	GCSGC	1 cut(s)	1713
TscAI	CASTG	3 cut(s)	864, 1689, 2224
TseI	GCWGC	2 cut(s)	348, 1745
TspDTI	ATGAA	8 cut(s)	471, 607, 635, 756, 987, 1073, 1837, 2244
TspGWI	ACGGA	3 cut(s)	1742, 1846, 2163
TspRI	CASTG	3 cut(s)	864, 1689, 2224
Tth111I	GACNNNGTC	2 cut(s)	813, 1093
Vha464I	CTTAAG	1 cut(s)	1739
VpaK11BI	GGWCC	4 cut(s)	851, 1107, 1442, 2360
XbaI	TCTAGA	1 cut(s)	199
XceI	RCATGY	1 cut(s)	278
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1048, 2026
XmnI	GAANNNNTTC	3 cut(s)	213, 245, 713
XspI	CTAG	8 cut(s)	170, 200, 837, 1704, 1763, 1805, 2082, 2147
Zsp2I	ATGCAT	1 cut(s)	1793

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.