Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7D

Orthogroup ID

OG0008693

Physical Location & Seq

Genomic Coordinates Reverse (-)

70303 .. 78870

Gene Structure 8568 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG000600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1743 bp

ATGAAATATTCTGGAGTGTTATCTGCTCCTGAGCCTGCAGATGGGGAAAATAGAATTGATGGTTCTTCCTCGAAGGTTCGTCTGTTCTTGAAAAAAATCACAAAGAAGTATTCTAAGGTTGGCCCAGATAACAAGCTGAGCTGGACTTCATCCTTAGGCCGGGAAGAAAGAAAGATATATGAGAAATTTCGACCATGTCAGGATTCTGTTTCTGCGACTAGCTCGGGAGATGGTCCACCAGTGAAGAGAGCTCAAAGTTTTACTGAAGGGAATTTGGCTATCCCACCATCATCAACCTTAACTCATTCGGGTAGCCAAAGTCATATCTCTGTTGTCTCTGATGCGGATGAAAAGTTTAGTAGCGATGAGGGAACGCTTTGTTTGAATTTGTTGTTATCAAGGTTGTTCTTTGACGCCAAAAGTAGCATGGAGATGAAAAGATCCATACAAGCTCAGATTCAGAGGACATTATCCAATATGAGGACCCCAAGTTACATTGGTGATGTGATCTGTACAGACCTTAATATTGGGAATCTCCCACCTTATATACATGGCATGAGAGTTGTCCCAATGGACATGAGTGATGTGTGGGCTTTGGAAGTTGACATTGGATATTATGGTGGTGCGGTGTTAGACGTTGAAACAAGATTGGAAGTTCGTGAATTAGACTTCCCTAAAGGCATTGGGGATTCAGGTTCCGAATCAGGCTCTGTTAGGGATATGTCAACCGATCTTTTTGAAGAATTTGAGTATTTTGGAAAGCATTTAAATCTTGGTGAAGGCGCAGTTGATGCAGTAGAGCCTAAGGAGGAGTGTGGTCCAAAACCTGATGGATCAAAACTCTCTACGAGCAGTATGTCTGCATCAAGTAATGGATCCAGGTGGAAATTGCTTCTAAATTCTATAGCCAAACAAGTTTCACAGGTGCCTCTATCTTTGGCAATAAGGATAACTTCCCTTCGAGGAATATTGCGGTTACATATCAAGCCACCTCCTTCAGATCGCTTGTGGTTTGCCTTTACATCCATGCCTGATATAGATTTCAACCTGGACTCATCAGTGGGAGATCACAAGATTACTAGTGGCCGCATAGCTTTGTTTCTGATCAGTCGGCTTAAGGCAGCAATCCGTGAAACCCTAGTGCAACCAAACTTTGAAAGTGTATGCATACCGTGGATGCTAGCAGAAAAGGATGACTGGGTACCGCGGAAGATTGCTCCTTTCATATGGGTTAACCAAGAATCTGCAAATGATTCTCCTACAAATTTATGTGAAGTACCATCGGAGGAAAAGTGCAGGACAGAATCTGGTGGGGGAACCTCTGGTGATCATTCACAGGGCAAGAATCAAAAACTGAAAAAAGCCGAATCTGTTGAAAAAACAATTCCAGAATCCACAAATGTGTTGGCCTTTTCGGTGAGTTCCAATGATCTGTCAACTGGGAGTAGTGATGGGACTAGTCGAGAACTAAGAACCCCATTATTGGTGAATGGTGAAGCACAAGAAACGTGCAAAAAGAAGCTAGATGATATACCAGAATGCCAATCTCTGTCGAGGTCTATAATTCCGTTTGATAAACAGAGTAGTCATAACAGTGAAGAGGATGAATCAAAGCCAAAGAGGATGGGGCGAAGAGCAAGAATGCTTGATCTGGGGAAGAAGATGGGGGAGAAATTAGAAGAAAAGAGGCGTACATTTGAAGAGAAGAGTAGGAACATCGTTGAGAAAATGCGAGGACCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MMM1

Protein Analysis

580

Amino Acids

64.09

Weight (kDa)

6.34

Isoelectric Point (pI)

50.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PDZD8_N	PF26547	125 - 219	5.1e-06	PDZD8 N-terminal TULIPs domain
PDZD8_N	PF26547	312 - 385	1.2e-07	PDZD8 N-terminal TULIPs domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008693)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17820 AT1G73200
fragaria_vesca	FvH4_5g18670 FvH4_5g18670 FvH4_5g18670 FvH4_5g18670
malus_domestica	MD14G1000100.v1.1
prunus_persica	Prupe.5G246400_v2.0.a1 Prupe.5G246400_v2.0.a1
pyrus_communis	pycom49g00010
rosa_chinensis	RchiOBHm_Chr7g0176841
rosa_laevigata	RLG00000005581
rosa_multiflora	Rmu_sc0005162.1_g000006
rosa_roxburghii	Rroxscaffold_3G00276370
rosa_rugosa	Rorug06G0401100 Rorug06G0401100 Rorug06G0401100
rosa_samantha	Rh3CG305600 Rh7AG000400 Rh7BG000700 Rh7CG000400 Rh7DG000600
rosa_wichuraiana	Rw7G000030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1201
AccB1I	GGYRCC	2 cut(s)	925, 1201
AccII	CGCG	1 cut(s)	1207
AciI	CCGC	6 cut(s)	344, 626, 973, 1087, 1205, 1207
AclWI	GGATC	4 cut(s)	435, 841, 870, 883
AcoI	YGGCCR	1 cut(s)	1084
AcsI	RAATTY	6 cut(s)	185, 271, 385, 743, 898, 1264
AcuI	CTGAAG	2 cut(s)	285, 981
AcyI	GRCGYC	1 cut(s)	414
AfaI	GTAC	4 cut(s)	514, 1203, 1278, 1693
AfiI	CCNNNNNNNGG	4 cut(s)	41, 159, 480, 1483
AflII	CTTAAG	1 cut(s)	1115
AgsI	TTSAA	8 cut(s)	91, 385, 641, 740, 1045, 1157, 1376, 1700
AhlI	ACTAGT	2 cut(s)	1079, 1457
AjnI	CCWGG	2 cut(s)	878, 1047
AjuI	GAANNNNNNNTTGG	2 cut(s)	591, 623
AleI	CACNNNNGTG	1 cut(s)	1400
AluBI	AGCT	7 cut(s)	136, 141, 222, 251, 452, 1094, 1522
AluI	AGCT	7 cut(s)	136, 141, 222, 251, 452, 1094, 1522
Alw21I	GWGCWC	1 cut(s)	253
Alw26I	GTCTC	1 cut(s)	340
AlwI	GGATC	4 cut(s)	435, 841, 870, 883
AlwNI	CAGNNNCTG	2 cut(s)	710, 1307
Ama87I	CYCGRG	1 cut(s)	223
AoxI	GGCC	4 cut(s)	121, 157, 1084, 1407
ApeKI	GCWGC	1 cut(s)	1121
ApoI	RAATTY	6 cut(s)	185, 271, 385, 743, 898, 1264
Asp718I	GGTACC	1 cut(s)	1201
AspLEI	GCGC	1 cut(s)	785
AspS9I	GGNCC	5 cut(s)	122, 233, 483, 818, 1736
AsuC2I	CCSGG	1 cut(s)	161
AsuHPI	GGTGA	6 cut(s)	512, 788, 1337, 1429, 1498, 1505
AsuNHI	GCTAGC	1 cut(s)	1180
AvaI	CYCGRG	1 cut(s)	223
AvaII	GGWCC	4 cut(s)	233, 483, 818, 1736
AxyI	CCTNAGG	2 cut(s)	154, 804
BamHI	GGATCC	1 cut(s)	875
BanI	GGYRCC	2 cut(s)	925, 1201
BanII	GRGCYC	1 cut(s)	253
Bbv12I	GWGCWC	1 cut(s)	253
BbvI	GCAGC	1 cut(s)	1133
BccI	CCATC	9 cut(s)	35, 53, 224, 295, 824, 1288, 1445, 1618, 1657
BciT130I	CCWGG	2 cut(s)	880, 1049
BclI	TGATCA	2 cut(s)	1104, 1327
BcnI	CCSGG	1 cut(s)	161
BcoDI	GTCTC	1 cut(s)	340
BcuI	ACTAGT	2 cut(s)	1079, 1457
BfaI	CTAG	6 cut(s)	219, 1080, 1139, 1181, 1458, 1523
BfmI	CTRYAG	2 cut(s)	36, 903
BfrI	CTTAAG	1 cut(s)	1115
BisI	GCNGC	2 cut(s)	1087, 1122
BlpI	GCTNAGC	1 cut(s)	137
BlsI	GCNGC	2 cut(s)	1088, 1123
Bme1390I	CCNGG	3 cut(s)	161, 880, 1049
Bme18I	GGWCC	4 cut(s)	233, 483, 818, 1736
BmeT110I	CYCGRG	1 cut(s)	223
BmgT120I	GGNCC	5 cut(s)	122, 233, 483, 818, 1736
BmiI	GGNNCC	6 cut(s)	485, 697, 877, 927, 1203, 1318
BmrFI	CCNGG	3 cut(s)	161, 880, 1049
BmrI	ACTGGG	2 cut(s)	1207, 1449
BmsI	GCATC	4 cut(s)	331, 781, 872, 1167
BmtI	GCTAGC	1 cut(s)	1184
BmuI	ACTGGG	2 cut(s)	1207, 1449
BpmI	CTGGAG	1 cut(s)	33
Bpu10I	CCTNAGC	1 cut(s)	30
Bpu1102I	GCTNAGC	1 cut(s)	137
BpuMI	CCSGG	1 cut(s)	161
BsaHI	GRCGYC	1 cut(s)	414
BsaJI	CCNNGG	2 cut(s)	1172, 1205
BsaXI	ACNNNNNCTCC	2 cut(s)	1277, 1307
Bsc4I	CCNNNNNNNGG	4 cut(s)	41, 159, 480, 1483
Bse1I	ACTGG	3 cut(s)	239, 1202, 1444
Bse21I	CCTNAGG	2 cut(s)	154, 804
BseBI	CCWGG	2 cut(s)	880, 1049
BseDI	CCNNGG	2 cut(s)	1172, 1205
BseGI	GGATG	7 cut(s)	149, 352, 1022, 1182, 1198, 1609, 1629
BseLI	CCNNNNNNNGG	4 cut(s)	41, 159, 480, 1483
BseMII	CTCAG	3 cut(s)	21, 128, 467
BseNI	ACTGG	3 cut(s)	239, 1202, 1444
BseRI	GAGGAG	1 cut(s)	824
BseXI	GCAGC	1 cut(s)	1133
BsgI	GTGCAG	1 cut(s)	1315
Bsh1236I	CGCG	1 cut(s)	1207
BshFI	GGCC	4 cut(s)	123, 159, 1086, 1409
BshNI	GGYRCC	2 cut(s)	925, 1201
BsiHKAI	GWGCWC	1 cut(s)	253
BsiHKCI	CYCGRG	1 cut(s)	223
BsiSI	CCGG	1 cut(s)	160
BslFI	GGGAC	2 cut(s)	551, 1468
BslI	CCNNNNNNNGG	4 cut(s)	41, 159, 480, 1483
BsmAI	GTCTC	1 cut(s)	340
BsmFI	GGGAC	2 cut(s)	551, 1468
BsmI	GAATGC	2 cut(s)	1544, 1647
BsnI	GGCC	4 cut(s)	123, 159, 1086, 1409
BsoBI	CYCGRG	1 cut(s)	223
Bsp1286I	GDGCHC	1 cut(s)	253
Bsp1407I	TGTACA	1 cut(s)	512
Bsp1720I	GCTNAGC	1 cut(s)	137
BspACI	CCGC	6 cut(s)	344, 626, 973, 1087, 1205, 1207
BspANI	GGCC	4 cut(s)	123, 159, 1086, 1409
BspCNI	CTCAG	3 cut(s)	22, 129, 466
BspFNI	CGCG	1 cut(s)	1207
BspLI	GGNNCC	6 cut(s)	485, 697, 877, 927, 1203, 1318
BspMAI	CTGCAG	1 cut(s)	40
BspOI	GCTAGC	1 cut(s)	1184
BspPI	GGATC	4 cut(s)	435, 841, 870, 883
BspQI	GCTCTTC	1 cut(s)	1627
BspT107I	GGYRCC	2 cut(s)	925, 1201
BspTI	CTTAAG	1 cut(s)	1115
BsrGI	TGTACA	1 cut(s)	512
BsrI	ACTGG	3 cut(s)	239, 1202, 1444
BssECI	CCNNGG	2 cut(s)	1172, 1205
BssNI	GRCGYC	1 cut(s)	414
Bst2UI	CCWGG	2 cut(s)	880, 1049
Bst4CI	ACNGT	2 cut(s)	1173, 1595
Bst6I	CTCTTC	5 cut(s)	239, 1593, 1627, 1695, 1700
BstACI	GRCGYC	1 cut(s)	414
BstAFI	CTTAAG	1 cut(s)	1115
BstAPI	GCANNNNNTGC	1 cut(s)	791
BstAUI	TGTACA	1 cut(s)	512
BstC8I	GCNNGC	2 cut(s)	36, 1182
BstDEI	CTNAG	7 cut(s)	30, 114, 137, 154, 453, 804, 1469
BstDSI	CCRYGG	2 cut(s)	1172, 1205
BstF5I	GGATG	7 cut(s)	149, 352, 1022, 1182, 1198, 1609, 1629
BstFNI	CGCG	1 cut(s)	1207
BstHHI	GCGC	1 cut(s)	785
BstMAI	GTCTC	1 cut(s)	340
BstMWI	GCNNNNNNNGC	1 cut(s)	791
BstNI	CCWGG	2 cut(s)	880, 1049
BstSCI	CCNGG	3 cut(s)	159, 878, 1047
BstSFI	CTRYAG	2 cut(s)	36, 903
BstUI	CGCG	1 cut(s)	1207
BstV1I	GCAGC	1 cut(s)	1133
BstX2I	RGATCY	2 cut(s)	440, 875
BstYI	RGATCY	2 cut(s)	440, 875
Bsu36I	CCTNAGG	2 cut(s)	154, 804
BsuRI	GGCC	4 cut(s)	123, 159, 1086, 1409
BtgI	CCRYGG	2 cut(s)	1172, 1205
BtgZI	GCGATG	1 cut(s)	378
BtsCI	GGATG	7 cut(s)	149, 352, 1022, 1182, 1198, 1609, 1629
BtsIMutI	CAGTG	3 cut(s)	246, 1065, 1600
Cac8I	GCNNGC	2 cut(s)	36, 1182
CaiI	CAGNNNCTG	2 cut(s)	710, 1307
CfoI	GCGC	1 cut(s)	785
Cfr13I	GGNCC	5 cut(s)	122, 233, 483, 818, 1736
Cfr42I	CCGCGG	1 cut(s)	1208
CseI	GACGC	1 cut(s)	422
Csp6I	GTAC	4 cut(s)	513, 1202, 1277, 1692
CviAII	CATG	7 cut(s)	195, 427, 551, 556, 577, 1027, 1740
CviQI	GTAC	4 cut(s)	513, 1202, 1277, 1692
DdeI	CTNAG	7 cut(s)	30, 114, 137, 154, 453, 804, 1469
DraI	TTTAAA	1 cut(s)	768
EaeI	YGGCCR	1 cut(s)	1084
Eam1104I	CTCTTC	5 cut(s)	239, 1593, 1627, 1695, 1700
EarI	CTCTTC	5 cut(s)	239, 1593, 1627, 1695, 1700
Ecl136II	GAGCTC	1 cut(s)	251
Eco24I	GRGCYC	1 cut(s)	253
Eco47I	GGWCC	4 cut(s)	233, 483, 818, 1736
Eco53kI	GAGCTC	1 cut(s)	251
Eco57I	CTGAAG	2 cut(s)	285, 981
Eco81I	CCTNAGG	2 cut(s)	154, 804
Eco88I	CYCGRG	1 cut(s)	223
EcoICRI	GAGCTC	1 cut(s)	251
EcoO109I	RGGNCCY	1 cut(s)	483
EcoRII	CCWGG	2 cut(s)	878, 1047
EcoT22I	ATGCAT	1 cut(s)	1169
EcoT38I	GRGCYC	1 cut(s)	253
FaeI	CATG	7 cut(s)	198, 430, 554, 559, 580, 1030, 1743
FalI	AAGNNNNNCTT	2 cut(s)	937, 969
FaqI	GGGAC	2 cut(s)	551, 1468
FatI	CATG	7 cut(s)	194, 426, 550, 555, 576, 1026, 1739
FauNDI	CATATG	1 cut(s)	1226
FbaI	TGATCA	2 cut(s)	1104, 1327
Fnu4HI	GCNGC	2 cut(s)	1087, 1122
FokI	GGATG	7 cut(s)	136, 359, 1009, 1189, 1205, 1616, 1636
FriOI	GRGCYC	1 cut(s)	253
Fsp4HI	GCNGC	2 cut(s)	1087, 1122
FspBI	CTAG	6 cut(s)	219, 1080, 1139, 1181, 1458, 1523
GlaI	GCGC	1 cut(s)	784
GluI	GCNGC	2 cut(s)	1087, 1122
GsuI	CTGGAG	1 cut(s)	33
HaeIII	GGCC	4 cut(s)	123, 159, 1086, 1409
HapII	CCGG	1 cut(s)	160
HgaI	GACGC	1 cut(s)	422
HhaI	GCGC	1 cut(s)	785
Hin1I	GRCGYC	1 cut(s)	414
Hin1II	CATG	7 cut(s)	198, 430, 554, 559, 580, 1030, 1743
Hin6I	GCGC	1 cut(s)	783
HinP1I	GCGC	1 cut(s)	783
HincII	GTYRAC	4 cut(s)	604, 726, 1234, 1437
HindII	GTYRAC	4 cut(s)	604, 726, 1234, 1437
HpaI	GTTAAC	1 cut(s)	1234
HpaII	CCGG	1 cut(s)	160
HphI	GGTGA	6 cut(s)	512, 788, 1337, 1429, 1498, 1505
Hpy166II	GTNNAC	5 cut(s)	236, 604, 726, 1234, 1437
Hpy188I	TCNGA	7 cut(s)	340, 456, 462, 700, 1000, 1104, 1285
Hpy188III	TCNNGA	8 cut(s)	12, 29, 88, 200, 225, 659, 1388, 1463
Hpy8I	GTNNAC	5 cut(s)	236, 604, 726, 1234, 1437
HpyAV	CCTTC	5 cut(s)	67, 260, 773, 968, 1005
HpyCH4III	ACNGT	2 cut(s)	1173, 1595
HpyCH4IV	ACGT	2 cut(s)	636, 1508
HpyCH4V	TGCA	8 cut(s)	38, 794, 863, 1144, 1167, 1247, 1296, 1512
HpyF10VI	GCNNNNNNNGC	1 cut(s)	791
HpyF3I	CTNAG	7 cut(s)	30, 114, 137, 154, 453, 804, 1469
HpySE526I	ACGT	2 cut(s)	636, 1508
Hsp92I	GRCGYC	1 cut(s)	414
Hsp92II	CATG	7 cut(s)	198, 430, 554, 559, 580, 1030, 1743
HspAI	GCGC	1 cut(s)	783
KpnI	GGTACC	1 cut(s)	1205
Ksp22I	TGATCA	2 cut(s)	1104, 1327
KspAI	GTTAAC	1 cut(s)	1234
KspI	CCGCGG	1 cut(s)	1208
LguI	GCTCTTC	1 cut(s)	1627
LmnI	GCTCC	2 cut(s)	31, 1222
Lsp1109I	GCAGC	1 cut(s)	1133
LweI	GCATC	4 cut(s)	331, 781, 872, 1167
MaeI	CTAG	6 cut(s)	219, 1080, 1139, 1181, 1458, 1523
MaeII	ACGT	2 cut(s)	636, 1508
MaeIII	GTNAC	2 cut(s)	491, 975
MflI	RGATCY	2 cut(s)	440, 875
MhlI	GDGCHC	1 cut(s)	253
MlyI	GAGTC	1 cut(s)	1046
Mph1103I	ATGCAT	1 cut(s)	1169
MseI	TTAA	5 cut(s)	299, 522, 767, 1116, 1233
MslI	CAYNNNNRTG	3 cut(s)	431, 1400, 1593
MspA1I	CMGCKG	1 cut(s)	1207
MspCI	CTTAAG	1 cut(s)	1115
MspI	CCGG	1 cut(s)	160
MspR9I	CCNGG	3 cut(s)	161, 880, 1049
Mva1269I	GAATGC	2 cut(s)	1544, 1647
MvaI	CCWGG	2 cut(s)	880, 1049
MvnI	CGCG	1 cut(s)	1207
MwoI	GCNNNNNNNGC	1 cut(s)	791
NciI	CCSGG	1 cut(s)	161
NdeI	CATATG	1 cut(s)	1226
NheI	GCTAGC	1 cut(s)	1180
NlaIII	CATG	7 cut(s)	198, 430, 554, 559, 580, 1030, 1743
NlaIV	GGNNCC	6 cut(s)	485, 697, 877, 927, 1203, 1318
NsiI	ATGCAT	1 cut(s)	1169
OliI	CACNNNNGTG	1 cut(s)	1400
PciSI	GCTCTTC	1 cut(s)	1627
PctI	GAATGC	2 cut(s)	1544, 1647
PflFI	GACNNNGTC	1 cut(s)	195
PkrI	GCNGC	2 cut(s)	1088, 1123
PleI	GAGTC	1 cut(s)	1046
PpsI	GAGTC	1 cut(s)	1046
PpuMI	RGGWCCY	1 cut(s)	483
Psp124BI	GAGCTC	1 cut(s)	253
Psp5II	RGGWCCY	1 cut(s)	483
Psp6I	CCWGG	2 cut(s)	878, 1047
PspGI	CCWGG	2 cut(s)	878, 1047
PspN4I	GGNNCC	6 cut(s)	485, 697, 877, 927, 1203, 1318
PspPI	GGNCC	5 cut(s)	122, 233, 483, 818, 1736
PspPPI	RGGWCCY	1 cut(s)	483
PstI	CTGCAG	1 cut(s)	40
PstNI	CAGNNNCTG	2 cut(s)	710, 1307
PsuI	RGATCY	2 cut(s)	440, 875
PsyI	GACNNNGTC	1 cut(s)	195
RsaI	GTAC	4 cut(s)	514, 1203, 1278, 1693
RsaNI	GTAC	4 cut(s)	513, 1202, 1277, 1692
RseI	CAYNNNNRTG	3 cut(s)	431, 1400, 1593
SacI	GAGCTC	1 cut(s)	253
SacII	CCGCGG	1 cut(s)	1208
SapI	GCTCTTC	1 cut(s)	1627
SaqAI	TTAA	5 cut(s)	299, 522, 767, 1116, 1233
SatI	GCNGC	2 cut(s)	1087, 1122
Sau96I	GGNCC	5 cut(s)	122, 233, 483, 818, 1736
SchI	GAGTC	1 cut(s)	1046
ScrFI	CCNGG	3 cut(s)	161, 880, 1049
SduI	GDGCHC	1 cut(s)	253
SfaNI	GCATC	4 cut(s)	331, 781, 872, 1167
SfcI	CTRYAG	2 cut(s)	36, 903
Sfr303I	CCGCGG	1 cut(s)	1208
SgrBI	CCGCGG	1 cut(s)	1208
SinI	GGWCC	4 cut(s)	233, 483, 818, 1736
SmiI	ATTTAAAT	1 cut(s)	768
SmiMI	CAYNNNNRTG	3 cut(s)	431, 1400, 1593
SmlI	CTYRAG	1 cut(s)	1115
SmoI	CTYRAG	1 cut(s)	1115
SpeI	ACTAGT	2 cut(s)	1079, 1457
SsiI	CCGC	6 cut(s)	344, 626, 973, 1087, 1205, 1207
SspI	AATATT	3 cut(s)	8, 526, 969
SspMI	CTAG	6 cut(s)	219, 1080, 1139, 1181, 1458, 1523
SstI	GAGCTC	1 cut(s)	253
StyD4I	CCNGG	3 cut(s)	159, 878, 1047
SwaI	ATTTAAAT	1 cut(s)	768
TaaI	ACNGT	2 cut(s)	1173, 1595
TaiI	ACGT	2 cut(s)	639, 1511
TaqI	TCGA	5 cut(s)	71, 190, 961, 1462, 1553
TatI	WGTACW	1 cut(s)	512
TauI	GCSGC	1 cut(s)	1089
Tru1I	TTAA	5 cut(s)	299, 522, 767, 1116, 1233
Tru9I	TTAA	5 cut(s)	299, 522, 767, 1116, 1233
TscAI	CASTG	3 cut(s)	246, 1065, 1600
TseI	GCWGC	1 cut(s)	1121
TspDTI	ATGAA	6 cut(s)	17, 138, 363, 449, 1213, 1620
TspGWI	ACGGA	2 cut(s)	1118, 1557
TspRI	CASTG	3 cut(s)	246, 1065, 1600
Tth111I	GACNNNGTC	1 cut(s)	195
Vha464I	CTTAAG	1 cut(s)	1115
VpaK11BI	GGWCC	4 cut(s)	233, 483, 818, 1736
XapI	RAATTY	6 cut(s)	185, 271, 385, 743, 898, 1264
XcmI	CCANNNNNNNNNTGG	2 cut(s)	424, 1402
XspI	CTAG	6 cut(s)	219, 1080, 1139, 1181, 1458, 1523
Zsp2I	ATGCAT	1 cut(s)	1169

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.