Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0008693

Physical Location & Seq

Genomic Coordinates Reverse (-)

80267 .. 88798

Gene Structure 8532 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG000400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2370 bp

ATGTTGCTGTCGTTAAGTATTGGTTTTGTTTTTGGGGCGCTGGTGATTTTGGCCGTGGAAGCCCTGCTACTCTACTTTATCATCAACAGATTACAACACAAAACCAATAAGCACCAAGAAGCCGTACGAAAATCTCAAGAAATCCAATCCGAGTCAGACCTCCAGCTTCGCCAATCCCTAGAATTCAAGCAGGGAGTAGTTTGGGTTCTAGAACCAGAAAAAGTTCCAAAAAGTGAGCAAAAGAAAAAGAAGGAATTCTACGAGGTTTCTCCTACTAAAAAACATGCAAAAATCAAGAACCAACTACTCATTCTTACAGAATCAGATGGTTCCCGGACAGCCATTCAATTAAAGGGCTGCACTATTGAAGCGGTTTCTTCTACAAGTCTTGCTTCGAGAAAATGGGCCAAAAGGTTCCCGTTAAAATTGGAAAACAAGACCGCCATAATCTACAAGGGAAGTAAAATCTTTTATATTTATCTTGAAACTTCATGGGAGAAGGAATCATGGTGTAAAGCTCTTCGTTCAGCATCATGTGATGACAAAGAAAAACTTGACCAGTTTGCCAAGTTGCAGAAAGAATTTCAATGTTACTTGACATTGTTAAAAGCTGGATACCCCTCATTCATGAAATATTCTGGAGTGTTATCTGCTCCTGAGCCTGCAGATGGGGAAAATAGAATTGATGGTTCTTCCTCGAAGGTTCGTCTGTTCTTGAAAAAAATCACAAAGAAGTATTCTAAGGTTGGCCCAGATAACAAGCTGAGCTGGACTTCATCCTTAGGCCGGGAAGAAAGAAAGATATATGATAAATTTCGACCATGTCAGGATTCTGTTTCTGCGACTAGCTCGGGAGATGGTCCACCAGTGAAGAGAGCTCAAAGTTTTACTGAAGGGAATTTGGCTATCCCACCATCATCAACCTTAACTCATTCGGGTAGCCAAAGTCATATCTCTGTTGTCTCTGATGCGGATGAAAAGTTTAGTAGCGATGAGGGAACGCTTTGTTTGAATTTGTTGTTATCAAGGTTGTTCTTTGACGCCAAAAGTAGCATGGAGATGAAAAGATCCATACAAGCTCAGATTCAGAGGACATTGTCCAATATGAGGACCCCAAGTTACATTGGTGATGTTATCTGTACAGACCTTAATATTGGGAATCTCCCACCTTATATACATGGCATGAGAGTTGTCCCAATGGACATGAGTGATGTGTGGGCTTTGGAAGTTGACATTGGATATTATGGTGGTGCGGTGTTAGACGTTGAAACAAGATTGGAAGTTCGTGAATTAGACTTCCCTAAAGGCATTGGGGATTCAGGTTCCGAATCAGGCTCTGTTAGGGATATGTCAACCGATCTTTTTGAAGAATTTGAGTATTTTGGAAAGCATTTAAATCTTGGTGAAGGCGCAGTTGATGCAGTAGAGCCTAAGGAGGAGTGTGGTCCAAAACCTGATGGATCAAAACTGTCTACGAGCAGTATGTCTGCATCAAGTAATGGATCCAGGTGGAAATCGCTTCTAAATTCTATAGCCAAACAAGTTTCACAGGTGCCTCTATCTTTGGCAATAAGGATAACTTCCCTTCGAGGAATATTGCGGTTACATATCAAGCCACCTCCTTCAGATCGCTTGTGGTTTGCCTTTACATCCATGCCTGATATAGATTTCAACCTGGACTCATCAGTGGGAGATCACAAGATTACTAGTGGCCGCATAGCTTTGTTTCTGATCAGTCGGCTTAAGGCAGCAATCCGTGAAACCCTAGTGCAACCAAACTTTGAAAGTGTATGCATGCCGTGGATGCTAGCAGAAAAGGATGACTGGGTACCGCGGAAGATTGCTCCTTTCATATGGGTTAACCAAGAATCCGCAAATGATTCTCCTACAAATTTATGTGAAGTACCATCGGAGGAAATGTGCAGGACAGAATCTGGTGGGGGAACCTCTGGTGATCATTCACAGGGCAAGAATCAAAAACTGAAAAAAGCCGAATCTGTTGAAAAAACAATTCCAGAATCCACAAATGTGTTGGCCTTTTCGGTGAGTTCCAATGATCTGTCTACTGGGAGTAGTGATGGGACTAGTCGAGAACTAAGAACCCCATTATTGGTGAATGGTGAAGCACAAGAAACGTGCAAAAAGAAGCTAGATGATATACCAGAATGCCAATCTCCGTCGAGGTCTATAATTCTGTTTGATAAACAGAGTAGTCATAACAGTGAAGAGGATGAATCAAAGCCAAAGAGGATGGGGCGAAGAGCAAGAATGCTTGATCTGGGGAAGAAGATGGGGGAGAAATTAGAAGAAAAGAGGCGTACATTTGAAGAGAAGAGTAGGAACATCGTTGAGAAAATGCGAGGACCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MMM1

Protein Analysis

789

Amino Acids

88.14

Weight (kDa)

8.6

Isoelectric Point (pI)

53.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PH_SMPa	PF23065	63 - 179	1.1e-52	PH domain associated with SMP domain
PDZD8_N	PF26547	334 - 427	8e-06	PDZD8 N-terminal TULIPs domain
PDZD8_N	PF26547	521 - 594	1.9e-07	PDZD8 N-terminal TULIPs domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008693)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17820 AT1G73200
fragaria_vesca	FvH4_5g18670 FvH4_5g18670 FvH4_5g18670 FvH4_5g18670
malus_domestica	MD14G1000100.v1.1
prunus_persica	Prupe.5G246400_v2.0.a1 Prupe.5G246400_v2.0.a1
pyrus_communis	pycom49g00010
rosa_chinensis	RchiOBHm_Chr7g0176841
rosa_laevigata	RLG00000005581
rosa_multiflora	Rmu_sc0005162.1_g000006
rosa_roxburghii	Rroxscaffold_3G00276370
rosa_rugosa	Rorug06G0401100 Rorug06G0401100 Rorug06G0401100
rosa_samantha	Rh3CG305600 Rh7AG000400 Rh7BG000700 Rh7CG000400 Rh7DG000600
rosa_wichuraiana	Rw7G000030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1828
AccB1I	GGYRCC	2 cut(s)	1552, 1828
AccI	GTMKAC	2 cut(s)	1472, 2063
AccII	CGCG	1 cut(s)	1834
AciI	CCGC	9 cut(s)	371, 441, 971, 1253, 1600, 1714, 1832, 1834, 1872
AclWI	GGATC	4 cut(s)	1062, 1468, 1497, 1510
AcoI	YGGCCR	2 cut(s)	51, 1711
AcsI	RAATTY	9 cut(s)	182, 254, 581, 812, 898, 1012, 1370, 1525, 1891
AcuI	CTGAAG	2 cut(s)	912, 1608
AcyI	GRCGYC	1 cut(s)	1041
AfaI	GTAC	5 cut(s)	126, 1141, 1830, 1905, 2320
AfiI	CCNNNNNNNGG	4 cut(s)	668, 786, 1107, 2110
AflII	CTTAAG	1 cut(s)	1742
AhlI	ACTAGT	2 cut(s)	1706, 2084
AjnI	CCWGG	2 cut(s)	1505, 1674
AjuI	GAANNNNNNNTTGG	4 cut(s)	294, 326, 1218, 1250
AleI	CACNNNNGTG	1 cut(s)	2027
Alw21I	GWGCWC	1 cut(s)	880
Alw26I	GTCTC	1 cut(s)	967
AlwI	GGATC	4 cut(s)	1062, 1468, 1497, 1510
AlwNI	CAGNNNCTG	2 cut(s)	1337, 1934
Ama87I	CYCGRG	1 cut(s)	850
AoxI	GGCC	6 cut(s)	51, 405, 748, 784, 1711, 2034
ApeKI	GCWGC	2 cut(s)	357, 1748
ApoI	RAATTY	9 cut(s)	182, 254, 581, 812, 898, 1012, 1370, 1525, 1891
Asp700I	GAANNNNTTC	2 cut(s)	222, 254
Asp718I	GGTACC	1 cut(s)	1828
AspLEI	GCGC	2 cut(s)	40, 1412
AspS9I	GGNCC	6 cut(s)	405, 749, 860, 1110, 1445, 2363
AsuC2I	CCSGG	2 cut(s)	334, 788
AsuHPI	GGTGA	7 cut(s)	55, 1139, 1415, 1964, 2056, 2125, 2132
AsuNHI	GCTAGC	1 cut(s)	1807
AvaI	CYCGRG	1 cut(s)	850
AvaII	GGWCC	4 cut(s)	860, 1110, 1445, 2363
AxyI	CCTNAGG	2 cut(s)	781, 1431
BamHI	GGATCC	1 cut(s)	1502
BanI	GGYRCC	2 cut(s)	1552, 1828
BanII	GRGCYC	1 cut(s)	880
BarI	GAAGNNNNNNTAC	4 cut(s)	51, 83, 242, 274
Bbv12I	GWGCWC	1 cut(s)	880
BbvI	GCAGC	2 cut(s)	344, 1760
BceAI	ACGGC	3 cut(s)	38, 107, 1783
BciT130I	CCWGG	2 cut(s)	1507, 1676
BciVI	GTATCC	1 cut(s)	608
BclI	TGATCA	2 cut(s)	1731, 1954
BcnI	CCSGG	2 cut(s)	334, 788
BcoDI	GTCTC	1 cut(s)	967
BcuI	ACTAGT	2 cut(s)	1706, 2084
BfaI	CTAG	8 cut(s)	179, 209, 846, 1707, 1766, 1808, 2085, 2150
BfmI	CTRYAG	2 cut(s)	663, 1530
BfoI	RGCGCY	1 cut(s)	41
BfrI	CTTAAG	1 cut(s)	1742
BfuI	GTATCC	1 cut(s)	608
BisI	GCNGC	3 cut(s)	358, 1714, 1749
BlpI	GCTNAGC	1 cut(s)	764
BlsI	GCNGC	3 cut(s)	359, 1715, 1750
Bme1390I	CCNGG	4 cut(s)	334, 788, 1507, 1676
Bme18I	GGWCC	4 cut(s)	860, 1110, 1445, 2363
BmeT110I	CYCGRG	1 cut(s)	850
BmgT120I	GGNCC	6 cut(s)	405, 749, 860, 1110, 1445, 2363
BmiI	GGNNCC	8 cut(s)	331, 416, 1112, 1324, 1504, 1554, 1830, 1945
BmrFI	CCNGG	4 cut(s)	334, 788, 1507, 1676
BmrI	ACTGGG	2 cut(s)	1834, 2076
BmsI	GCATC	5 cut(s)	539, 958, 1408, 1499, 1794
BmtI	GCTAGC	1 cut(s)	1811
BmuI	ACTGGG	2 cut(s)	1834, 2076
BpmI	CTGGAG	2 cut(s)	146, 660
Bpu10I	CCTNAGC	1 cut(s)	657
Bpu1102I	GCTNAGC	1 cut(s)	764
BpuEI	CTTGAG	1 cut(s)	120
BpuMI	CCSGG	2 cut(s)	334, 788
BsaHI	GRCGYC	1 cut(s)	1041
BsaJI	CCNNGG	3 cut(s)	54, 1799, 1832
BsaXI	ACNNNNNCTCC	2 cut(s)	1904, 1934
Bsc4I	CCNNNNNNNGG	4 cut(s)	668, 786, 1107, 2110
Bse1I	ACTGG	4 cut(s)	559, 866, 1829, 2071
Bse21I	CCTNAGG	2 cut(s)	781, 1431
BseBI	CCWGG	2 cut(s)	1507, 1676
BseDI	CCNNGG	3 cut(s)	54, 1799, 1832
BseGI	GGATG	7 cut(s)	776, 979, 1649, 1809, 1825, 2236, 2256
BseLI	CCNNNNNNNGG	4 cut(s)	668, 786, 1107, 2110
BseMII	CTCAG	3 cut(s)	648, 755, 1094
BseNI	ACTGG	4 cut(s)	559, 866, 1829, 2071
BseRI	GAGGAG	1 cut(s)	1451
BseXI	GCAGC	2 cut(s)	344, 1760
BsgI	GTGCAG	2 cut(s)	343, 1942
Bsh1236I	CGCG	1 cut(s)	1834
BshFI	GGCC	6 cut(s)	53, 407, 750, 786, 1713, 2036
BshNI	GGYRCC	2 cut(s)	1552, 1828
BsiHKAI	GWGCWC	1 cut(s)	880
BsiHKCI	CYCGRG	1 cut(s)	850
BsiSI	CCGG	2 cut(s)	334, 787
BsiWI	CGTACG	1 cut(s)	124
BslFI	GGGAC	2 cut(s)	1178, 2095
BslI	CCNNNNNNNGG	4 cut(s)	668, 786, 1107, 2110
BsmAI	GTCTC	1 cut(s)	967
BsmFI	GGGAC	2 cut(s)	1178, 2095
BsmI	GAATGC	2 cut(s)	2171, 2274
BsnI	GGCC	6 cut(s)	53, 407, 750, 786, 1713, 2036
BsoBI	CYCGRG	1 cut(s)	850
Bsp1286I	GDGCHC	1 cut(s)	880
Bsp1407I	TGTACA	1 cut(s)	1139
Bsp1720I	GCTNAGC	1 cut(s)	764
BspACI	CCGC	9 cut(s)	371, 441, 971, 1253, 1600, 1714, 1832, 1834, 1872
BspANI	GGCC	6 cut(s)	53, 407, 750, 786, 1713, 2036
BspCNI	CTCAG	3 cut(s)	649, 756, 1093
BspFNI	CGCG	1 cut(s)	1834
BspHI	TCATGA	1 cut(s)	627
BspLI	GGNNCC	8 cut(s)	331, 416, 1112, 1324, 1504, 1554, 1830, 1945
BspMAI	CTGCAG	1 cut(s)	667
BspOI	GCTAGC	1 cut(s)	1811
BspPI	GGATC	4 cut(s)	1062, 1468, 1497, 1510
BspQI	GCTCTTC	2 cut(s)	525, 2254
BspT107I	GGYRCC	2 cut(s)	1552, 1828
BspTI	CTTAAG	1 cut(s)	1742
BsrGI	TGTACA	1 cut(s)	1139
BsrI	ACTGG	4 cut(s)	559, 866, 1829, 2071
BssECI	CCNNGG	3 cut(s)	54, 1799, 1832
BssNI	GRCGYC	1 cut(s)	1041
Bst2UI	CCWGG	2 cut(s)	1507, 1676
Bst4CI	ACNGT	2 cut(s)	1470, 2222
Bst6I	CTCTTC	6 cut(s)	525, 866, 2220, 2254, 2322, 2327
BstACI	GRCGYC	1 cut(s)	1041
BstAFI	CTTAAG	1 cut(s)	1742
BstAPI	GCANNNNNTGC	1 cut(s)	1418
BstAUI	TGTACA	1 cut(s)	1139
BstC8I	GCNNGC	3 cut(s)	663, 1796, 1809
BstDEI	CTNAG	7 cut(s)	657, 741, 764, 781, 1080, 1431, 2096
BstDSI	CCRYGG	3 cut(s)	54, 1799, 1832
BstF5I	GGATG	7 cut(s)	776, 979, 1649, 1809, 1825, 2236, 2256
BstFNI	CGCG	1 cut(s)	1834
BstH2I	RGCGCY	1 cut(s)	41
BstHHI	GCGC	2 cut(s)	40, 1412
BstMAI	GTCTC	1 cut(s)	967
BstMWI	GCNNNNNNNGC	3 cut(s)	59, 1418, 1804
BstNI	CCWGG	2 cut(s)	1507, 1676
BstNSI	RCATGY	2 cut(s)	287, 1798
BstSCI	CCNGG	4 cut(s)	332, 786, 1505, 1674
BstSFI	CTRYAG	2 cut(s)	663, 1530
BstUI	CGCG	1 cut(s)	1834
BstV1I	GCAGC	2 cut(s)	344, 1760
BstX2I	RGATCY	2 cut(s)	1067, 1502
BstYI	RGATCY	2 cut(s)	1067, 1502
Bsu36I	CCTNAGG	2 cut(s)	781, 1431
BsuI	GTATCC	1 cut(s)	608
BsuRI	GGCC	6 cut(s)	53, 407, 750, 786, 1713, 2036
BtgI	CCRYGG	3 cut(s)	54, 1799, 1832
BtgZI	GCGATG	1 cut(s)	1005
BtsCI	GGATG	7 cut(s)	776, 979, 1649, 1809, 1825, 2236, 2256
BtsIMutI	CAGTG	3 cut(s)	873, 1692, 2227
Cac8I	GCNNGC	3 cut(s)	663, 1796, 1809
CaiI	CAGNNNCTG	2 cut(s)	1337, 1934
CciI	TCATGA	1 cut(s)	627
CfoI	GCGC	2 cut(s)	40, 1412
Cfr13I	GGNCC	6 cut(s)	405, 749, 860, 1110, 1445, 2363
Cfr42I	CCGCGG	1 cut(s)	1835
CseI	GACGC	1 cut(s)	1049
Csp6I	GTAC	5 cut(s)	125, 1140, 1829, 1904, 2319
CviQI	GTAC	5 cut(s)	125, 1140, 1829, 1904, 2319
DdeI	CTNAG	7 cut(s)	657, 741, 764, 781, 1080, 1431, 2096
DraI	TTTAAA	1 cut(s)	1395
EaeI	YGGCCR	2 cut(s)	51, 1711
Eam1104I	CTCTTC	6 cut(s)	525, 866, 2220, 2254, 2322, 2327
EarI	CTCTTC	6 cut(s)	525, 866, 2220, 2254, 2322, 2327
Ecl136II	GAGCTC	1 cut(s)	878
Eco24I	GRGCYC	1 cut(s)	880
Eco47I	GGWCC	4 cut(s)	860, 1110, 1445, 2363
Eco53kI	GAGCTC	1 cut(s)	878
Eco57I	CTGAAG	2 cut(s)	912, 1608
Eco81I	CCTNAGG	2 cut(s)	781, 1431
Eco88I	CYCGRG	1 cut(s)	850
EcoICRI	GAGCTC	1 cut(s)	878
EcoO109I	RGGNCCY	1 cut(s)	1110
EcoRI	GAATTC	2 cut(s)	182, 254
EcoRII	CCWGG	2 cut(s)	1505, 1674
EcoT22I	ATGCAT	1 cut(s)	1796
EcoT38I	GRGCYC	1 cut(s)	880
FalI	AAGNNNNNCTT	6 cut(s)	376, 408, 537, 569, 1564, 1596
FaqI	GGGAC	2 cut(s)	1178, 2095
FauNDI	CATATG	1 cut(s)	1853
FbaI	TGATCA	2 cut(s)	1731, 1954
FblI	GTMKAC	2 cut(s)	1472, 2063
Fnu4HI	GCNGC	3 cut(s)	358, 1714, 1749
FokI	GGATG	7 cut(s)	763, 986, 1636, 1816, 1832, 2243, 2263
FriOI	GRGCYC	1 cut(s)	880
Fsp4HI	GCNGC	3 cut(s)	358, 1714, 1749
FspBI	CTAG	8 cut(s)	179, 209, 846, 1707, 1766, 1808, 2085, 2150
GlaI	GCGC	2 cut(s)	39, 1411
GluI	GCNGC	3 cut(s)	358, 1714, 1749
GsuI	CTGGAG	2 cut(s)	146, 660
HaeII	RGCGCY	1 cut(s)	41
HaeIII	GGCC	6 cut(s)	53, 407, 750, 786, 1713, 2036
HapII	CCGG	2 cut(s)	334, 787
HgaI	GACGC	1 cut(s)	1049
HhaI	GCGC	2 cut(s)	40, 1412
Hin1I	GRCGYC	1 cut(s)	1041
Hin6I	GCGC	2 cut(s)	38, 1410
HinP1I	GCGC	2 cut(s)	38, 1410
HincII	GTYRAC	3 cut(s)	1231, 1353, 1861
HindII	GTYRAC	3 cut(s)	1231, 1353, 1861
HpaI	GTTAAC	1 cut(s)	1861
HpaII	CCGG	2 cut(s)	334, 787
HphI	GGTGA	7 cut(s)	55, 1139, 1415, 1964, 2056, 2125, 2132
Hpy166II	GTNNAC	6 cut(s)	863, 1231, 1353, 1473, 1861, 2064
Hpy8I	GTNNAC	6 cut(s)	863, 1231, 1353, 1473, 1861, 2064
Hpy99I	CGWCG	1 cut(s)	2182
HpyAV	CCTTC	7 cut(s)	244, 493, 694, 887, 1400, 1595, 1632
HpyCH4III	ACNGT	2 cut(s)	1470, 2222
HpyCH4IV	ACGT	2 cut(s)	1263, 2135
HpyF10VI	GCNNNNNNNGC	3 cut(s)	59, 1418, 1804
HpyF3I	CTNAG	7 cut(s)	657, 741, 764, 781, 1080, 1431, 2096
HpySE526I	ACGT	2 cut(s)	1263, 2135
Hsp92I	GRCGYC	1 cut(s)	1041
HspAI	GCGC	2 cut(s)	38, 1410
KpnI	GGTACC	1 cut(s)	1832
Ksp22I	TGATCA	2 cut(s)	1731, 1954
KspAI	GTTAAC	1 cut(s)	1861
KspI	CCGCGG	1 cut(s)	1835
LguI	GCTCTTC	2 cut(s)	525, 2254
LmnI	GCTCC	2 cut(s)	658, 1849
Lsp1109I	GCAGC	2 cut(s)	344, 1760
LweI	GCATC	5 cut(s)	539, 958, 1408, 1499, 1794
MaeI	CTAG	8 cut(s)	179, 209, 846, 1707, 1766, 1808, 2085, 2150
MaeII	ACGT	2 cut(s)	1263, 2135
MaeIII	GTNAC	3 cut(s)	590, 1118, 1602
MflI	RGATCY	2 cut(s)	1067, 1502
MhlI	GDGCHC	1 cut(s)	880
MlyI	GAGTC	2 cut(s)	161, 1673
Mph1103I	ATGCAT	1 cut(s)	1796
MroXI	GAANNNNTTC	2 cut(s)	222, 254
MseI	TTAA	9 cut(s)	14, 350, 422, 605, 926, 1149, 1394, 1743, 1860
MslI	CAYNNNNRTG	3 cut(s)	1058, 2027, 2220
MspA1I	CMGCKG	1 cut(s)	1834
MspCI	CTTAAG	1 cut(s)	1742
MspI	CCGG	2 cut(s)	334, 787
MspR9I	CCNGG	4 cut(s)	334, 788, 1507, 1676
Mva1269I	GAATGC	2 cut(s)	2171, 2274
MvaI	CCWGG	2 cut(s)	1507, 1676
MvnI	CGCG	1 cut(s)	1834
MwoI	GCNNNNNNNGC	3 cut(s)	59, 1418, 1804
NciI	CCSGG	2 cut(s)	334, 788
NdeI	CATATG	1 cut(s)	1853
NheI	GCTAGC	1 cut(s)	1807
NlaIV	GGNNCC	8 cut(s)	331, 416, 1112, 1324, 1504, 1554, 1830, 1945
NsiI	ATGCAT	1 cut(s)	1796
NspI	RCATGY	2 cut(s)	287, 1798
OliI	CACNNNNGTG	1 cut(s)	2027
PaeI	GCATGC	1 cut(s)	1798
PagI	TCATGA	1 cut(s)	627
PciSI	GCTCTTC	2 cut(s)	525, 2254
PctI	GAATGC	2 cut(s)	2171, 2274
PdmI	GAANNNNTTC	2 cut(s)	222, 254
Pfl23II	CGTACG	1 cut(s)	124
PflFI	GACNNNGTC	2 cut(s)	822, 1096
PfoI	TCCNGGA	1 cut(s)	332
PkrI	GCNGC	3 cut(s)	359, 1715, 1750
PleI	GAGTC	2 cut(s)	160, 1673
PpsI	GAGTC	2 cut(s)	160, 1673
PpuMI	RGGWCCY	1 cut(s)	1110
Psp124BI	GAGCTC	1 cut(s)	880
Psp5II	RGGWCCY	1 cut(s)	1110
Psp6I	CCWGG	2 cut(s)	1505, 1674
PspGI	CCWGG	2 cut(s)	1505, 1674
PspLI	CGTACG	1 cut(s)	124
PspN4I	GGNNCC	8 cut(s)	331, 416, 1112, 1324, 1504, 1554, 1830, 1945
PspPI	GGNCC	6 cut(s)	405, 749, 860, 1110, 1445, 2363
PspPPI	RGGWCCY	1 cut(s)	1110
PsrI	GAACNNNNNNTAC	2 cut(s)	189, 221
PstI	CTGCAG	1 cut(s)	667
PstNI	CAGNNNCTG	2 cut(s)	1337, 1934
PsuI	RGATCY	2 cut(s)	1067, 1502
PsyI	GACNNNGTC	2 cut(s)	822, 1096
RsaI	GTAC	5 cut(s)	126, 1141, 1830, 1905, 2320
RsaNI	GTAC	5 cut(s)	125, 1140, 1829, 1904, 2319
RseI	CAYNNNNRTG	3 cut(s)	1058, 2027, 2220
SacI	GAGCTC	1 cut(s)	880
SacII	CCGCGG	1 cut(s)	1835
SapI	GCTCTTC	2 cut(s)	525, 2254
SaqAI	TTAA	9 cut(s)	14, 350, 422, 605, 926, 1149, 1394, 1743, 1860
SatI	GCNGC	3 cut(s)	358, 1714, 1749
Sau96I	GGNCC	6 cut(s)	405, 749, 860, 1110, 1445, 2363
SchI	GAGTC	2 cut(s)	161, 1673
ScrFI	CCNGG	4 cut(s)	334, 788, 1507, 1676
SduI	GDGCHC	1 cut(s)	880
SfaNI	GCATC	5 cut(s)	539, 958, 1408, 1499, 1794
SfcI	CTRYAG	2 cut(s)	663, 1530
Sfr303I	CCGCGG	1 cut(s)	1835
SgrBI	CCGCGG	1 cut(s)	1835
SinI	GGWCC	4 cut(s)	860, 1110, 1445, 2363
SmiI	ATTTAAAT	1 cut(s)	1395
SmiMI	CAYNNNNRTG	3 cut(s)	1058, 2027, 2220
SmlI	CTYRAG	2 cut(s)	135, 1742
SmoI	CTYRAG	2 cut(s)	135, 1742
SpeI	ACTAGT	2 cut(s)	1706, 2084
SphI	GCATGC	1 cut(s)	1798
SsiI	CCGC	9 cut(s)	371, 441, 971, 1253, 1600, 1714, 1832, 1834, 1872
SspI	AATATT	3 cut(s)	635, 1153, 1596
SspMI	CTAG	8 cut(s)	179, 209, 846, 1707, 1766, 1808, 2085, 2150
SstI	GAGCTC	1 cut(s)	880
StyD4I	CCNGG	4 cut(s)	332, 786, 1505, 1674
SwaI	ATTTAAAT	1 cut(s)	1395
TaaI	ACNGT	2 cut(s)	1470, 2222
TaiI	ACGT	2 cut(s)	1266, 2138
TaqI	TCGA	6 cut(s)	395, 698, 817, 1588, 2089, 2180
TatI	WGTACW	1 cut(s)	1139
TauI	GCSGC	1 cut(s)	1716
Tru1I	TTAA	9 cut(s)	14, 350, 422, 605, 926, 1149, 1394, 1743, 1860
Tru9I	TTAA	9 cut(s)	14, 350, 422, 605, 926, 1149, 1394, 1743, 1860
TscAI	CASTG	3 cut(s)	873, 1692, 2227
TseI	GCWGC	2 cut(s)	357, 1748
TspDTI	ATGAA	8 cut(s)	480, 616, 644, 765, 990, 1076, 1840, 2247
TspGWI	ACGGA	2 cut(s)	1745, 2166
TspRI	CASTG	3 cut(s)	873, 1692, 2227
Tth111I	GACNNNGTC	2 cut(s)	822, 1096
Vha464I	CTTAAG	1 cut(s)	1742
VpaK11BI	GGWCC	4 cut(s)	860, 1110, 1445, 2363
XapI	RAATTY	9 cut(s)	182, 254, 581, 812, 898, 1012, 1370, 1525, 1891
XbaI	TCTAGA	1 cut(s)	208
XceI	RCATGY	2 cut(s)	287, 1798
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1051, 2029
XmiI	GTMKAC	2 cut(s)	1472, 2063
XmnI	GAANNNNTTC	2 cut(s)	222, 254
XspI	CTAG	8 cut(s)	179, 209, 846, 1707, 1766, 1808, 2085, 2150
Zsp2I	ATGCAT	1 cut(s)	1796

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.