Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0008693

Physical Location & Seq

Genomic Coordinates Forward (+)

68753398 .. 68761191

Gene Structure 7794 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000005581

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2364 bp

ATGTTGCTGTCGTTAAGTATTGGTTTTGTGTTTGGGGCGCTGGCCATTTTGGCCGTGGAAGCCCTGCTACTCTACTTTATCATCAACAGATTACAACACAAAACCAAGAAGCACCAACAAGCCCTACGAAAATCTCAAGAAATCCAATCCGAGTCAGACCTCCAGCTTCGCCGATCCCTAGAATTCAAGCAGGGAGTAGTTTGGGTTCTAGAACCAGAAAAAGTTCCAAAAAGTGAGCAAAAGAGAAAGAAGGAATTCTACGAGGTTTCTCCTATTAAAAAACATGCAAAAATCAAGAACCAACTACTCATTCTTACAGAATCAGATGGTTCCCAGACAGCCATTCAATTAAAGGGCTGCACTGTTGAAGCGGTTTCTTCTACAAGTCTTGCTTCGAGAAAATGGGCCAAAAGGTTCCCGTTAAAATTGGAAAACAAGACCGCCATAATCTACAAGGGAAGTAAAATCTTTTATATTTATCTTGAAACTTCATGGGAGAAGGAATCATGGTGTAAAGCTCTTCGTTCAGCATCATGTGATGACAAAGAAAAACTTGACCAGTTTGCCAAGTTGCAGAAGGAATTTCAATGTTACTTGACATTGTTAAATGCTGGTTTCCCCTCATTCATGAAATATTCTGGAGTGTTATCTGCTCCTGAGCCTGCAGATAGGGAAAATAGAATTGATGGTTCTTCCTCGAAGGTTCGTCTGTTCTTGAAAAAATTCACAAAGAAGTATTCTAAGGTTGGCCCAGATAACAAGCTGAGCTGGACTTCATCCTTAGGCCGGGAAGAAAGAAAGATATATGAGAAATTTCGACCATGTCAGGATTCTGTTTCTGCGACTAGCTCGGGAGATGGTCCACCAGTGAAGAGAGCTCAAAGTTTTACTGAAGGGAATTTGGCTATCCCACCATCAACCTTAACTCATTCGGGTAGCCAAAGTCATATCTCTGTTGTCTCCGATGCGGACGCTGATGAAAAGTTTACTAGCGATGAGGGAACACTTTGTTTGAATTTGTTGTTATCAAGGTTGTTCTTTGACGCCAAAAGTAGCGTGGAGTTGAAAAGATCCATACAAGCTCAGATTCAGAGGACATTGTCCAATATGAGGACCCCAAGTTACATTGGTGATGTGATCTGTACAGACCTTAATATTGGGAATCTCCCACCTTATATACATGGCATGAGAGTTGTCCCTATGGACATGAGTGATGTGTGGGCTTTGGAAGTTGACATTGGATATTATGGTGGTGCGGTGTTAGACGTTGAAACAAGATTGGAAGTTCGTGAATTAGACTTCCCTAAAGGCATTGGGGATTCAGGTTCCGAGTCAGGCTCTGTTAGGGATATGTCAACCGATCTTTTTGAAGAATTTGAGTATTTTGGAAAGCATTTAAATCTTGGTGAAGGCGCAGTTGATGCAGTAGAGCCTAAGGAGGAGTGTGGTCCAAAACCTGATGGATCAAAACTCTCTAAGAGCAGTATGTCTGCATCAAGTAATGGATCCGGGTGGAAATCGCTTCTAAATTCTATAGCCAAACAAGTTTCACAGGTGCCTCTATCTTTGGCAATAAGGATAACTTCCCTTCGAGGAATATTGCGGTTACATATCAAGCCACCTCCTTCAGATCGTTTGTGGTTTGCCTTTACATCCATGCCTGATATAGATTTCAACCTGGACTCATCAGTGGGAGATCACAAGATTACTAGTGGCCGCATAGCTTTGTTTCTGATCAGTCGGCTTAAGGCAGCAATCCGTGAAACCCTAGTGCAACCAAACTTTGAAAGTGTGTGCATACCATGGATGCTAGCAGAAAAGGATGACTGGGTACCGCGGAAGATTGCTCCTTTCATATGGGTTAGCCAAGAATCTGCAAATGATTCTCCTACAGAAGTACCAACGGAGGAAAAGTGCAGGACAGAATCTGTTGGGGGAACCTCTGGTGATCATTCACAGGGCAAGAATCAAAAACTGAAAAAAGCCGAATCTGTTGAAAAAACAATTCCAGAATCCACAAATGTGTTGGCCTTTTCGGTGAGTTCCAATGATCTGTCAACTGGGAGTAGTGATGGGACTAGTCGAGAACTAAGAACCCCATTATTGGTGAATGGTGAAGCACAAGAAACGTGCAAAAAGAAGCTAGATGATATACCAGAATGCCAATCTCCGTCGAGGTCTATAATTCCATTTGATAAACAGAGTAGTCATAACAGTGAAGAGGATGAATCAAAGCCAAAGAGGATGGGGCGAAGAGCAAGAATGCTTGATCTGGGGAAGAAGATGGGGGAGAAATTAGAAGAAAAGAGGCGTACATTTGAAGAGAAGAGTAGGAACATCGTTGAGAAAATGCGAGGACCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MMM1

Protein Analysis

788

Amino Acids

87.93

Weight (kDa)

8.76

Isoelectric Point (pI)

51.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PH_SMPa	PF23065	63 - 179	2.5e-53	PH domain associated with SMP domain
PDZD8_N	PF26547	522 - 595	1.9e-07	PDZD8 N-terminal TULIPs domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008693)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17820 AT1G73200
fragaria_vesca	FvH4_5g18670 FvH4_5g18670 FvH4_5g18670 FvH4_5g18670
malus_domestica	MD14G1000100.v1.1
prunus_persica	Prupe.5G246400_v2.0.a1 Prupe.5G246400_v2.0.a1
pyrus_communis	pycom49g00010
rosa_chinensis	RchiOBHm_Chr7g0176841
rosa_laevigata	RLG00000005581
rosa_multiflora	Rmu_sc0005162.1_g000006
rosa_roxburghii	Rroxscaffold_3G00276370
rosa_rugosa	Rorug06G0401100 Rorug06G0401100 Rorug06G0401100
rosa_samantha	Rh3CG305600 Rh7AG000400 Rh7BG000700 Rh7CG000400 Rh7DG000600
rosa_wichuraiana	Rw7G000030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1831
AccB1I	GGYRCC	2 cut(s)	1555, 1831
AccII	CGCG	1 cut(s)	1837
AciI	CCGC	8 cut(s)	371, 441, 968, 1256, 1603, 1717, 1835, 1837
AclWI	GGATC	5 cut(s)	168, 1065, 1471, 1500, 1513
AcoI	YGGCCR	3 cut(s)	42, 51, 1714
AcsI	RAATTY	9 cut(s)	182, 254, 581, 722, 812, 898, 1015, 1373, 1528
AcuI	CTGAAG	2 cut(s)	912, 1611
AcyI	GRCGYC	1 cut(s)	1044
AfaI	GTAC	4 cut(s)	1144, 1833, 1899, 2314
AfiI	CCNNNNNNNGG	3 cut(s)	786, 1110, 2104
AflII	CTTAAG	1 cut(s)	1745
AhlI	ACTAGT	2 cut(s)	1709, 2078
AjnI	CCWGG	1 cut(s)	1677
AjuI	GAANNNNNNNTTGG	4 cut(s)	294, 326, 1221, 1253
AleI	CACNNNNGTG	1 cut(s)	2021
AluBI	AGCT	9 cut(s)	166, 518, 763, 768, 849, 878, 1082, 1724, 2143
AluI	AGCT	9 cut(s)	166, 518, 763, 768, 849, 878, 1082, 1724, 2143
Alw21I	GWGCWC	1 cut(s)	880
Alw26I	GTCTC	1 cut(s)	964
AlwI	GGATC	5 cut(s)	168, 1065, 1471, 1500, 1513
AlwNI	CAGNNNCTG	2 cut(s)	1340, 1928
Ama87I	CYCGRG	1 cut(s)	850
AoxI	GGCC	7 cut(s)	42, 51, 405, 748, 784, 1714, 2028
ApeKI	GCWGC	2 cut(s)	357, 1751
ApoI	RAATTY	9 cut(s)	182, 254, 581, 722, 812, 898, 1015, 1373, 1528
Asp700I	GAANNNNTTC	3 cut(s)	222, 254, 722
Asp718I	GGTACC	1 cut(s)	1831
AspLEI	GCGC	2 cut(s)	40, 1415
AspS9I	GGNCC	6 cut(s)	405, 749, 860, 1113, 1448, 2357
AsuC2I	CCSGG	2 cut(s)	788, 1510
AsuHPI	GGTGA	6 cut(s)	1142, 1418, 1958, 2050, 2119, 2126
AsuNHI	GCTAGC	1 cut(s)	1810
AvaI	CYCGRG	1 cut(s)	850
AvaII	GGWCC	4 cut(s)	860, 1113, 1448, 2357
AxyI	CCTNAGG	2 cut(s)	781, 1434
BaeI	ACNNNNGTAYC	2 cut(s)	1881, 1914
BalI	TGGCCA	1 cut(s)	44
BamHI	GGATCC	1 cut(s)	1505
BanI	GGYRCC	2 cut(s)	1555, 1831
BanII	GRGCYC	1 cut(s)	880
BarI	GAAGNNNNNNTAC	4 cut(s)	51, 83, 242, 274
Bbv12I	GWGCWC	1 cut(s)	880
BbvI	GCAGC	2 cut(s)	344, 1763
BccI	CCATC	8 cut(s)	320, 680, 851, 922, 1454, 2066, 2239, 2278
BceAI	ACGGC	1 cut(s)	38
BciT130I	CCWGG	1 cut(s)	1679
BclI	TGATCA	2 cut(s)	1734, 1948
BcnI	CCSGG	2 cut(s)	788, 1510
BcoDI	GTCTC	1 cut(s)	964
BcuI	ACTAGT	2 cut(s)	1709, 2078
BfaI	CTAG	9 cut(s)	179, 209, 846, 990, 1710, 1769, 1811, 2079, 2144
BfmI	CTRYAG	3 cut(s)	663, 1533, 1890
BfoI	RGCGCY	1 cut(s)	41
BfrI	CTTAAG	1 cut(s)	1745
BglI	GCCNNNNNGGC	1 cut(s)	50
BisI	GCNGC	3 cut(s)	358, 1717, 1752
BlpI	GCTNAGC	1 cut(s)	764
BlsI	GCNGC	3 cut(s)	359, 1718, 1753
Bme1390I	CCNGG	3 cut(s)	788, 1510, 1679
Bme18I	GGWCC	4 cut(s)	860, 1113, 1448, 2357
BmeT110I	CYCGRG	1 cut(s)	850
BmgT120I	GGNCC	6 cut(s)	405, 749, 860, 1113, 1448, 2357
BmiI	GGNNCC	8 cut(s)	331, 416, 1115, 1327, 1507, 1557, 1833, 1939
BmrFI	CCNGG	3 cut(s)	788, 1510, 1679
BmrI	ACTGGG	2 cut(s)	1837, 2070
BmsI	GCATC	5 cut(s)	539, 955, 1411, 1502, 1797
BmtI	GCTAGC	1 cut(s)	1814
BmuI	ACTGGG	2 cut(s)	1837, 2070
BplI	GAGNNNNNCTC	2 cut(s)	1322, 1354
BpmI	CTGGAG	2 cut(s)	146, 660
Bpu10I	CCTNAGC	1 cut(s)	657
Bpu1102I	GCTNAGC	1 cut(s)	764
BpuEI	CTTGAG	1 cut(s)	120
BpuMI	CCSGG	2 cut(s)	788, 1510
BsaHI	GRCGYC	1 cut(s)	1044
BsaJI	CCNNGG	3 cut(s)	54, 1802, 1835
BsaXI	ACNNNNNCTCC	2 cut(s)	1898, 1928
Bsc4I	CCNNNNNNNGG	3 cut(s)	786, 1110, 2104
Bse1I	ACTGG	4 cut(s)	559, 866, 1832, 2065
Bse21I	CCTNAGG	2 cut(s)	781, 1434
BseBI	CCWGG	1 cut(s)	1679
BseDI	CCNNGG	3 cut(s)	54, 1802, 1835
BseGI	GGATG	6 cut(s)	776, 1652, 1812, 1828, 2230, 2250
BseLI	CCNNNNNNNGG	3 cut(s)	786, 1110, 2104
BseMII	CTCAG	3 cut(s)	648, 755, 1097
BseNI	ACTGG	4 cut(s)	559, 866, 1832, 2065
BseRI	GAGGAG	1 cut(s)	1454
BseXI	GCAGC	2 cut(s)	344, 1763
BsgI	GTGCAG	2 cut(s)	343, 1936
Bsh1236I	CGCG	1 cut(s)	1837
BshFI	GGCC	7 cut(s)	44, 53, 407, 750, 786, 1716, 2030
BshNI	GGYRCC	2 cut(s)	1555, 1831
BsiHKAI	GWGCWC	1 cut(s)	880
BsiHKCI	CYCGRG	1 cut(s)	850
BsiSI	CCGG	2 cut(s)	787, 1509
BslFI	GGGAC	2 cut(s)	1181, 2089
BslI	CCNNNNNNNGG	3 cut(s)	786, 1110, 2104
BsmAI	GTCTC	1 cut(s)	964
BsmFI	GGGAC	2 cut(s)	1181, 2089
BsmI	GAATGC	2 cut(s)	2165, 2268
BsnI	GGCC	7 cut(s)	44, 53, 407, 750, 786, 1716, 2030
BsoBI	CYCGRG	1 cut(s)	850
Bsp1286I	GDGCHC	1 cut(s)	880
Bsp1407I	TGTACA	1 cut(s)	1142
Bsp1720I	GCTNAGC	1 cut(s)	764
Bsp19I	CCATGG	1 cut(s)	1802
BspACI	CCGC	8 cut(s)	371, 441, 968, 1256, 1603, 1717, 1835, 1837
BspANI	GGCC	7 cut(s)	44, 53, 407, 750, 786, 1716, 2030
BspCNI	CTCAG	3 cut(s)	649, 756, 1096
BspFNI	CGCG	1 cut(s)	1837
BspHI	TCATGA	1 cut(s)	627
BspLI	GGNNCC	8 cut(s)	331, 416, 1115, 1327, 1507, 1557, 1833, 1939
BspMAI	CTGCAG	1 cut(s)	667
BspOI	GCTAGC	1 cut(s)	1814
BspPI	GGATC	5 cut(s)	168, 1065, 1471, 1500, 1513
BspQI	GCTCTTC	2 cut(s)	525, 2248
BspT107I	GGYRCC	2 cut(s)	1555, 1831
BspTI	CTTAAG	1 cut(s)	1745
BsrGI	TGTACA	1 cut(s)	1142
BsrI	ACTGG	4 cut(s)	559, 866, 1832, 2065
BssECI	CCNNGG	3 cut(s)	54, 1802, 1835
BssNI	GRCGYC	1 cut(s)	1044
BssT1I	CCWWGG	1 cut(s)	1802
Bst2UI	CCWGG	1 cut(s)	1679
Bst4CI	ACNGT	2 cut(s)	364, 2216
Bst6I	CTCTTC	6 cut(s)	525, 866, 2214, 2248, 2316, 2321
BstACI	GRCGYC	1 cut(s)	1044
BstAFI	CTTAAG	1 cut(s)	1745
BstAPI	GCANNNNNTGC	1 cut(s)	1421
BstAUI	TGTACA	1 cut(s)	1142
BstC8I	GCNNGC	3 cut(s)	42, 663, 1812
BstDEI	CTNAG	8 cut(s)	657, 741, 764, 781, 1083, 1434, 1476, 2090
BstDSI	CCRYGG	3 cut(s)	54, 1802, 1835
BstF5I	GGATG	6 cut(s)	776, 1652, 1812, 1828, 2230, 2250
BstFNI	CGCG	1 cut(s)	1837
BstH2I	RGCGCY	1 cut(s)	41
BstHHI	GCGC	2 cut(s)	40, 1415
BstMAI	GTCTC	1 cut(s)	964
BstMWI	GCNNNNNNNGC	3 cut(s)	50, 59, 1421
BstNI	CCWGG	1 cut(s)	1679
BstNSI	RCATGY	1 cut(s)	287
BstSCI	CCNGG	3 cut(s)	786, 1508, 1677
BstSFI	CTRYAG	3 cut(s)	663, 1533, 1890
BstUI	CGCG	1 cut(s)	1837
BstV1I	GCAGC	2 cut(s)	344, 1763
BstX2I	RGATCY	2 cut(s)	1070, 1505
BstYI	RGATCY	2 cut(s)	1070, 1505
Bsu36I	CCTNAGG	2 cut(s)	781, 1434
BsuRI	GGCC	7 cut(s)	44, 53, 407, 750, 786, 1716, 2030
BtgI	CCRYGG	3 cut(s)	54, 1802, 1835
BtgZI	GCGATG	1 cut(s)	1008
BtsCI	GGATG	6 cut(s)	776, 1652, 1812, 1828, 2230, 2250
BtsIMutI	CAGTG	4 cut(s)	360, 873, 1695, 2221
Cac8I	GCNNGC	3 cut(s)	42, 663, 1812
CaiI	CAGNNNCTG	2 cut(s)	1340, 1928
CciI	TCATGA	1 cut(s)	627
CfoI	GCGC	2 cut(s)	40, 1415
Cfr13I	GGNCC	6 cut(s)	405, 749, 860, 1113, 1448, 2357
Cfr42I	CCGCGG	1 cut(s)	1838
CseI	GACGC	2 cut(s)	980, 1052
Csp6I	GTAC	4 cut(s)	1143, 1832, 1898, 2313
CviQI	GTAC	4 cut(s)	1143, 1832, 1898, 2313
DdeI	CTNAG	8 cut(s)	657, 741, 764, 781, 1083, 1434, 1476, 2090
DraI	TTTAAA	1 cut(s)	1398
EaeI	YGGCCR	3 cut(s)	42, 51, 1714
Eam1104I	CTCTTC	6 cut(s)	525, 866, 2214, 2248, 2316, 2321
EarI	CTCTTC	6 cut(s)	525, 866, 2214, 2248, 2316, 2321
Ecl136II	GAGCTC	1 cut(s)	878
Eco130I	CCWWGG	1 cut(s)	1802
Eco24I	GRGCYC	1 cut(s)	880
Eco47I	GGWCC	4 cut(s)	860, 1113, 1448, 2357
Eco53kI	GAGCTC	1 cut(s)	878
Eco57I	CTGAAG	2 cut(s)	912, 1611
Eco81I	CCTNAGG	2 cut(s)	781, 1434
Eco88I	CYCGRG	1 cut(s)	850
EcoICRI	GAGCTC	1 cut(s)	878
EcoO109I	RGGNCCY	1 cut(s)	1113
EcoRI	GAATTC	2 cut(s)	182, 254
EcoRII	CCWGG	1 cut(s)	1677
EcoT14I	CCWWGG	1 cut(s)	1802
EcoT38I	GRGCYC	1 cut(s)	880
ErhI	CCWWGG	1 cut(s)	1802
FalI	AAGNNNNNCTT	6 cut(s)	376, 408, 537, 569, 1567, 1599
FaqI	GGGAC	2 cut(s)	1181, 2089
FauNDI	CATATG	1 cut(s)	1856
FbaI	TGATCA	2 cut(s)	1734, 1948
Fnu4HI	GCNGC	3 cut(s)	358, 1717, 1752
FokI	GGATG	6 cut(s)	763, 1639, 1819, 1835, 2237, 2257
FriOI	GRGCYC	1 cut(s)	880
Fsp4HI	GCNGC	3 cut(s)	358, 1717, 1752
FspBI	CTAG	9 cut(s)	179, 209, 846, 990, 1710, 1769, 1811, 2079, 2144
GlaI	GCGC	2 cut(s)	39, 1414
GluI	GCNGC	3 cut(s)	358, 1717, 1752
GsuI	CTGGAG	2 cut(s)	146, 660
HaeII	RGCGCY	1 cut(s)	41
HaeIII	GGCC	7 cut(s)	44, 53, 407, 750, 786, 1716, 2030
HapII	CCGG	2 cut(s)	787, 1509
HgaI	GACGC	2 cut(s)	980, 1052
HhaI	GCGC	2 cut(s)	40, 1415
Hin1I	GRCGYC	1 cut(s)	1044
Hin6I	GCGC	2 cut(s)	38, 1413
HinP1I	GCGC	2 cut(s)	38, 1413
HincII	GTYRAC	3 cut(s)	1234, 1356, 2058
HindII	GTYRAC	3 cut(s)	1234, 1356, 2058
HpaII	CCGG	2 cut(s)	787, 1509
HphI	GGTGA	6 cut(s)	1142, 1418, 1958, 2050, 2119, 2126
Hpy166II	GTNNAC	5 cut(s)	863, 987, 1234, 1356, 2058
Hpy188I	TCNGA	9 cut(s)	151, 157, 325, 964, 1086, 1092, 1330, 1630, 1734
Hpy8I	GTNNAC	5 cut(s)	863, 987, 1234, 1356, 2058
Hpy99I	CGWCG	1 cut(s)	2176
HpyAV	CCTTC	8 cut(s)	244, 493, 571, 694, 887, 1403, 1598, 1635
HpyCH4III	ACNGT	2 cut(s)	364, 2216
HpyCH4IV	ACGT	2 cut(s)	1266, 2129
HpyF10VI	GCNNNNNNNGC	3 cut(s)	50, 59, 1421
HpyF3I	CTNAG	8 cut(s)	657, 741, 764, 781, 1083, 1434, 1476, 2090
HpySE526I	ACGT	2 cut(s)	1266, 2129
Hsp92I	GRCGYC	1 cut(s)	1044
HspAI	GCGC	2 cut(s)	38, 1413
KpnI	GGTACC	1 cut(s)	1835
Ksp22I	TGATCA	2 cut(s)	1734, 1948
KspI	CCGCGG	1 cut(s)	1838
LguI	GCTCTTC	2 cut(s)	525, 2248
LmnI	GCTCC	2 cut(s)	658, 1852
Lsp1109I	GCAGC	2 cut(s)	344, 1763
LweI	GCATC	5 cut(s)	539, 955, 1411, 1502, 1797
MaeI	CTAG	9 cut(s)	179, 209, 846, 990, 1710, 1769, 1811, 2079, 2144
MaeII	ACGT	2 cut(s)	1266, 2129
MaeIII	GTNAC	3 cut(s)	590, 1121, 1605
MflI	RGATCY	2 cut(s)	1070, 1505
MhlI	GDGCHC	1 cut(s)	880
MlsI	TGGCCA	1 cut(s)	44
MluNI	TGGCCA	1 cut(s)	44
MlyI	GAGTC	3 cut(s)	161, 1340, 1676
Mox20I	TGGCCA	1 cut(s)	44
MroXI	GAANNNNTTC	3 cut(s)	222, 254, 722
MscI	TGGCCA	1 cut(s)	44
MseI	TTAA	9 cut(s)	14, 276, 350, 422, 605, 923, 1152, 1397, 1746
MslI	CAYNNNNRTG	2 cut(s)	2021, 2214
Msp20I	TGGCCA	1 cut(s)	44
MspA1I	CMGCKG	1 cut(s)	1837
MspCI	CTTAAG	1 cut(s)	1745
MspI	CCGG	2 cut(s)	787, 1509
MspR9I	CCNGG	3 cut(s)	788, 1510, 1679
Mva1269I	GAATGC	2 cut(s)	2165, 2268
MvaI	CCWGG	1 cut(s)	1679
MvnI	CGCG	1 cut(s)	1837
MwoI	GCNNNNNNNGC	3 cut(s)	50, 59, 1421
NciI	CCSGG	2 cut(s)	788, 1510
NcoI	CCATGG	1 cut(s)	1802
NdeI	CATATG	1 cut(s)	1856
NheI	GCTAGC	1 cut(s)	1810
NlaIV	GGNNCC	8 cut(s)	331, 416, 1115, 1327, 1507, 1557, 1833, 1939
NspI	RCATGY	1 cut(s)	287
OliI	CACNNNNGTG	1 cut(s)	2021
PagI	TCATGA	1 cut(s)	627
PciSI	GCTCTTC	2 cut(s)	525, 2248
PctI	GAATGC	2 cut(s)	2165, 2268
PdmI	GAANNNNTTC	3 cut(s)	222, 254, 722
PflFI	GACNNNGTC	2 cut(s)	822, 1099
PkrI	GCNGC	3 cut(s)	359, 1718, 1753
PleI	GAGTC	3 cut(s)	160, 1339, 1676
PpsI	GAGTC	3 cut(s)	160, 1339, 1676
PpuMI	RGGWCCY	1 cut(s)	1113
Psp124BI	GAGCTC	1 cut(s)	880
Psp5II	RGGWCCY	1 cut(s)	1113
Psp6I	CCWGG	1 cut(s)	1677
PspGI	CCWGG	1 cut(s)	1677
PspN4I	GGNNCC	8 cut(s)	331, 416, 1115, 1327, 1507, 1557, 1833, 1939
PspPI	GGNCC	6 cut(s)	405, 749, 860, 1113, 1448, 2357
PspPPI	RGGWCCY	1 cut(s)	1113
PsrI	GAACNNNNNNTAC	2 cut(s)	189, 221
PstI	CTGCAG	1 cut(s)	667
PstNI	CAGNNNCTG	2 cut(s)	1340, 1928
PsuI	RGATCY	2 cut(s)	1070, 1505
PsyI	GACNNNGTC	2 cut(s)	822, 1099
RsaI	GTAC	4 cut(s)	1144, 1833, 1899, 2314
RsaNI	GTAC	4 cut(s)	1143, 1832, 1898, 2313
RseI	CAYNNNNRTG	2 cut(s)	2021, 2214
SacI	GAGCTC	1 cut(s)	880
SacII	CCGCGG	1 cut(s)	1838
SapI	GCTCTTC	2 cut(s)	525, 2248
SaqAI	TTAA	9 cut(s)	14, 276, 350, 422, 605, 923, 1152, 1397, 1746
SatI	GCNGC	3 cut(s)	358, 1717, 1752
Sau96I	GGNCC	6 cut(s)	405, 749, 860, 1113, 1448, 2357
SchI	GAGTC	3 cut(s)	161, 1340, 1676
ScrFI	CCNGG	3 cut(s)	788, 1510, 1679
SduI	GDGCHC	1 cut(s)	880
SfaNI	GCATC	5 cut(s)	539, 955, 1411, 1502, 1797
SfcI	CTRYAG	3 cut(s)	663, 1533, 1890
SfiI	GGCCNNNNNGGCC	1 cut(s)	50
Sfr303I	CCGCGG	1 cut(s)	1838
SgrBI	CCGCGG	1 cut(s)	1838
SinI	GGWCC	4 cut(s)	860, 1113, 1448, 2357
SmiI	ATTTAAAT	1 cut(s)	1398
SmiMI	CAYNNNNRTG	2 cut(s)	2021, 2214
SmlI	CTYRAG	2 cut(s)	135, 1745
SmoI	CTYRAG	2 cut(s)	135, 1745
SpeI	ACTAGT	2 cut(s)	1709, 2078
SsiI	CCGC	8 cut(s)	371, 441, 968, 1256, 1603, 1717, 1835, 1837
SspI	AATATT	3 cut(s)	635, 1156, 1599
SspMI	CTAG	9 cut(s)	179, 209, 846, 990, 1710, 1769, 1811, 2079, 2144
SstI	GAGCTC	1 cut(s)	880
StyD4I	CCNGG	3 cut(s)	786, 1508, 1677
StyI	CCWWGG	1 cut(s)	1802
SwaI	ATTTAAAT	1 cut(s)	1398
TaaI	ACNGT	2 cut(s)	364, 2216
TaiI	ACGT	2 cut(s)	1269, 2132
TaqI	TCGA	6 cut(s)	395, 698, 817, 1591, 2083, 2174
TatI	WGTACW	1 cut(s)	1142
TauI	GCSGC	1 cut(s)	1719
Tru1I	TTAA	9 cut(s)	14, 276, 350, 422, 605, 923, 1152, 1397, 1746
Tru9I	TTAA	9 cut(s)	14, 276, 350, 422, 605, 923, 1152, 1397, 1746
TscAI	CASTG	4 cut(s)	367, 873, 1695, 2221
TseI	GCWGC	2 cut(s)	357, 1751
TspDTI	ATGAA	7 cut(s)	480, 616, 644, 765, 993, 1843, 2241
TspGWI	ACGGA	3 cut(s)	1748, 1919, 2160
TspRI	CASTG	4 cut(s)	367, 873, 1695, 2221
Tth111I	GACNNNGTC	2 cut(s)	822, 1099
Vha464I	CTTAAG	1 cut(s)	1745
VpaK11BI	GGWCC	4 cut(s)	860, 1113, 1448, 2357
XapI	RAATTY	9 cut(s)	182, 254, 581, 722, 812, 898, 1015, 1373, 1528
XbaI	TCTAGA	1 cut(s)	208
XceI	RCATGY	1 cut(s)	287
XcmI	CCANNNNNNNNNTGG	3 cut(s)	52, 1054, 2023
XmnI	GAANNNNTTC	3 cut(s)	222, 254, 722
XspI	CTAG	9 cut(s)	179, 209, 846, 990, 1710, 1769, 1811, 2079, 2144

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.