Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3C

Orthogroup ID

OG0008693

Physical Location & Seq

Genomic Coordinates Reverse (-)

31865371 .. 31873697

Gene Structure 8327 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3CG305600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1950 bp

ATGTTGCTGTCGTCAAGTATTTGTTTTGTTTTTGGGGCGCTGGCGATTTTGGCCGTGGAAGCCCTGCTACTCTACTTTATCATCAACAGATTACAACACAAAACCAAGAAGCACCAAGAAGCCCCACGAAAATCTCAAGAAATCCAATCCGAGTCAGACCTCCAGCTTCGCCAATCCCTAGAATTCAAGCAGGGAGTAGTTTGGGTTCTAGAACCAGAAAAAGTTCCAAAAAGTGAGCAAAAGAGAAAGAAGGAATTCTACGAGGTTTCTCCTACTAAAAAACATGCAAAAATCAAGAACCAACTACTCATTCTTACAGAATCAGATGGTTCCCAGACAGCCATTCAATTAAAGGGCTGCACTATTGAAGCGGTTTCTTCTACAAGTCTTGCTTCGGCAAAATGGGCCAAAGGGTTCCCATTAAAATTGGAAAACAAGACCGCCATAATCTACAAGGGAAGTAAAATCTTTTATATTTATCTTGAAACTTCATGGGAGAAGGAATCATGGTGTAAAGCTCTTCGTTCAGCATCATGTGATGACAAAGAAAAACTTGACCAGTTTGCCAAGTTGCAGAAAGAATTTCAATGTTACTTGACATTGTTAAAAGCTGGATACCCCTCATTCATGAAATATTCTGGAGTGTTATCTGCTCCTGAGCCTGCAGATGGGGAAAATAGAATTGATGGTTCTTCCTCGAAGGTTCGTCTGTTCTCGAAAAAAATCACAAAGAAGTATTCTAAGGTTGGCCCAGATAACAAGCTGAGCTGGACTTCATCCTTAGGCCGGGAAGAAAGAAAGATATATGAGAAATTTCGACCATGTCAGGATTCTGTTTCTGCTACTAGCTCGGGAGATGGTCCACCAGTGAAGAGAGCTCAAAGTTTTACTGAAGGGAATTTGGCTATCCCACCATCATCAACCTTAACTCATTCGGGTAGCCAAAGTCATATCTCTGTTGTCTCTGATGCGGATACTGATGAAAAGTTTAGTAGCGATGAGGGAACGCTTTGTTTGAATTTGTTGTTATCAAGGTTGTTCTTTGACGCCAAAAGTAGCATGGAGATGAAAATATCCATACAAGCTCAGATTCAGAGGACATTGTCCAATATGAGGACCCCAAGTTACATTGGTGATGTGATCTGTACAGACCTTAATATTGGGAATCTCCCACCTTATATACATGGCATGAGAGTTGTCCCAATGGACATGAGTGATGTGTGGGCTTTGGAAGTTGACATTGGATATTTTGGTGGTGCGGTGTTAGACGTTGAAGCAAGATTGGAAGTTCGTGAATCAAGATTGGAAGTTCGTGAATTAGACTTCCCTGAAGGCATTGGGGATTCAGGTTCCGAATCAGGCTTTGTTAGGGATATGTCAACCGATCTTTTTGAAGAATTTGAGTATTTTGGAAAGCATTTAAACTTAGGTGAAGGCGCAGTTGATGCAGTAGAGCCTAAGGAGGAGTGTGGTCCAAAACCTGATGGATCAAAACTCTCTACAAGCAGTATGTCTGCATCAAGTAATGGATCCTGGTGGAAATCGCTTCTAAATTCTATATTTTCACAGGTGCCTCTATCTTTGGCAATAAGGATAACTTCCCTTCGAGGAATATTGCGGTTACATATCAAGCCACCTCCTTCAGATCGCTTGTGGTTTACCTTTACATCCATGCCTGATATAGATTTCAACCTGGACTCATCAGTGGGAGATCTCAAGATTACTAGTGGCCGCATAGCTTTGTTTCTGATCAGTCGGCTTAAGGCAGCAATCCGTGAAACCCTAGTGCAACCAAACTTTGAAAGTGTATGCATACCGTGGATGCTAGCAGAAAAGGATGACTGGGTACCGCGGAAGATTGCTCCTTTCATATGGGTTAACCAAGAATCCGCAAATGATTCTCCTACAAATTTATGTGAAGTACCATCGGAGGAAAAGTGCAGGACATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MMM1

Protein Analysis

649

Amino Acids

72.54

Weight (kDa)

6.52

Isoelectric Point (pI)

44.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PH_SMPa	PF23065	63 - 179	5.1e-51	PH domain associated with SMP domain
PDZD8_N	PF26547	527 - 600	8.7e-07	PDZD8 N-terminal TULIPs domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008693)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17820 AT1G73200
fragaria_vesca	FvH4_5g18670 FvH4_5g18670 FvH4_5g18670 FvH4_5g18670
malus_domestica	MD14G1000100.v1.1
prunus_persica	Prupe.5G246400_v2.0.a1 Prupe.5G246400_v2.0.a1
pyrus_communis	pycom49g00010
rosa_chinensis	RchiOBHm_Chr7g0176841
rosa_laevigata	RLG00000005581
rosa_multiflora	Rmu_sc0005162.1_g000006
rosa_roxburghii	Rroxscaffold_3G00276370
rosa_rugosa	Rorug06G0401100 Rorug06G0401100 Rorug06G0401100
rosa_samantha	Rh3CG305600 Rh7AG000400 Rh7BG000700 Rh7CG000400 Rh7DG000600
rosa_wichuraiana	Rw7G000030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1846
AccB1I	GGYRCC	2 cut(s)	1570, 1846
AccII	CGCG	1 cut(s)	1852
AciI	CCGC	9 cut(s)	371, 441, 971, 1259, 1618, 1732, 1850, 1852, 1890
AclWI	GGATC	3 cut(s)	1495, 1524, 1537
AcoI	YGGCCR	2 cut(s)	51, 1729
AcsI	RAATTY	9 cut(s)	182, 254, 581, 812, 898, 1018, 1397, 1552, 1909
AcuI	CTGAAG	3 cut(s)	912, 1350, 1626
AcyI	GRCGYC	1 cut(s)	1047
AfaI	GTAC	3 cut(s)	1147, 1848, 1923
AfiI	CCNNNNNNNGG	3 cut(s)	668, 786, 1113
AflII	CTTAAG	1 cut(s)	1760
AhlI	ACTAGT	1 cut(s)	1724
AjnI	CCWGG	2 cut(s)	1532, 1692
AjuI	GAANNNNNNNTTGG	4 cut(s)	294, 326, 1224, 1256
AluBI	AGCT	9 cut(s)	166, 518, 611, 763, 768, 849, 878, 1085, 1739
AluI	AGCT	9 cut(s)	166, 518, 611, 763, 768, 849, 878, 1085, 1739
Alw21I	GWGCWC	1 cut(s)	880
Alw26I	GTCTC	1 cut(s)	967
AlwI	GGATC	3 cut(s)	1495, 1524, 1537
Ama87I	CYCGRG	1 cut(s)	850
AoxI	GGCC	5 cut(s)	51, 405, 748, 784, 1729
ApeKI	GCWGC	2 cut(s)	357, 1766
ApoI	RAATTY	9 cut(s)	182, 254, 581, 812, 898, 1018, 1397, 1552, 1909
Asp700I	GAANNNNTTC	2 cut(s)	222, 254
Asp718I	GGTACC	1 cut(s)	1846
AspLEI	GCGC	2 cut(s)	40, 1439
AspS9I	GGNCC	5 cut(s)	405, 749, 860, 1116, 1472
AsuC2I	CCSGG	1 cut(s)	788
AsuHPI	GGTGA	2 cut(s)	1145, 1442
AsuNHI	GCTAGC	1 cut(s)	1825
AvaI	CYCGRG	1 cut(s)	850
AvaII	GGWCC	3 cut(s)	860, 1116, 1472
AxyI	CCTNAGG	2 cut(s)	781, 1458
BamHI	GGATCC	1 cut(s)	1529
BanI	GGYRCC	2 cut(s)	1570, 1846
BanII	GRGCYC	1 cut(s)	880
BarI	GAAGNNNNNNTAC	4 cut(s)	51, 83, 242, 274
Bbv12I	GWGCWC	1 cut(s)	880
BbvI	GCAGC	2 cut(s)	344, 1778
BccI	CCATC	7 cut(s)	320, 662, 680, 851, 922, 1478, 1933
BceAI	ACGGC	1 cut(s)	38
BciT130I	CCWGG	2 cut(s)	1534, 1694
BciVI	GTATCC	2 cut(s)	608, 967
BclI	TGATCA	1 cut(s)	1749
BcnI	CCSGG	1 cut(s)	788
BcoDI	GTCTC	1 cut(s)	967
BcuI	ACTAGT	1 cut(s)	1724
BfaI	CTAG	6 cut(s)	179, 209, 846, 1725, 1784, 1826
BfmI	CTRYAG	1 cut(s)	663
BfoI	RGCGCY	1 cut(s)	41
BfrI	CTTAAG	1 cut(s)	1760
BfuI	GTATCC	2 cut(s)	608, 967
BglII	AGATCT	1 cut(s)	1711
BisI	GCNGC	3 cut(s)	358, 1732, 1767
BlpI	GCTNAGC	1 cut(s)	764
BlsI	GCNGC	3 cut(s)	359, 1733, 1768
Bme1390I	CCNGG	3 cut(s)	788, 1534, 1694
Bme18I	GGWCC	3 cut(s)	860, 1116, 1472
BmeT110I	CYCGRG	1 cut(s)	850
BmgT120I	GGNCC	5 cut(s)	405, 749, 860, 1116, 1472
BmiI	GGNNCC	7 cut(s)	331, 416, 1118, 1351, 1531, 1572, 1848
BmrFI	CCNGG	3 cut(s)	788, 1534, 1694
BmrI	ACTGGG	1 cut(s)	1852
BmsI	GCATC	5 cut(s)	539, 958, 1435, 1526, 1812
BmtI	GCTAGC	1 cut(s)	1829
BmuI	ACTGGG	1 cut(s)	1852
BpmI	CTGGAG	2 cut(s)	146, 660
Bpu10I	CCTNAGC	1 cut(s)	657
Bpu1102I	GCTNAGC	1 cut(s)	764
BpuEI	CTTGAG	2 cut(s)	120, 1700
BpuMI	CCSGG	1 cut(s)	788
BsaHI	GRCGYC	1 cut(s)	1047
BsaJI	CCNNGG	3 cut(s)	54, 1817, 1850
BsaXI	ACNNNNNCTCC	1 cut(s)	1922
Bsc4I	CCNNNNNNNGG	3 cut(s)	668, 786, 1113
Bse1I	ACTGG	3 cut(s)	559, 866, 1847
Bse21I	CCTNAGG	2 cut(s)	781, 1458
BseBI	CCWGG	2 cut(s)	1534, 1694
BseDI	CCNNGG	3 cut(s)	54, 1817, 1850
BseGI	GGATG	4 cut(s)	776, 1667, 1827, 1843
BseLI	CCNNNNNNNGG	3 cut(s)	668, 786, 1113
BseMII	CTCAG	3 cut(s)	648, 755, 1100
BseNI	ACTGG	3 cut(s)	559, 866, 1847
BseRI	GAGGAG	1 cut(s)	1478
BseXI	GCAGC	2 cut(s)	344, 1778
BsgI	GTGCAG	1 cut(s)	343
Bsh1236I	CGCG	1 cut(s)	1852
BshFI	GGCC	5 cut(s)	53, 407, 750, 786, 1731
BshNI	GGYRCC	2 cut(s)	1570, 1846
BsiHKAI	GWGCWC	1 cut(s)	880
BsiHKCI	CYCGRG	1 cut(s)	850
BsiSI	CCGG	1 cut(s)	787
BslFI	GGGAC	1 cut(s)	1184
BslI	CCNNNNNNNGG	3 cut(s)	668, 786, 1113
BsmAI	GTCTC	1 cut(s)	967
BsmFI	GGGAC	1 cut(s)	1184
BsnI	GGCC	5 cut(s)	53, 407, 750, 786, 1731
BsoBI	CYCGRG	1 cut(s)	850
Bsp1286I	GDGCHC	1 cut(s)	880
Bsp1407I	TGTACA	1 cut(s)	1145
Bsp143I	GATC	7 cut(s)	1140, 1384, 1487, 1529, 1645, 1711, 1749
Bsp1720I	GCTNAGC	1 cut(s)	764
BspACI	CCGC	9 cut(s)	371, 441, 971, 1259, 1618, 1732, 1850, 1852, 1890
BspANI	GGCC	5 cut(s)	53, 407, 750, 786, 1731
BspCNI	CTCAG	3 cut(s)	649, 756, 1099
BspFNI	CGCG	1 cut(s)	1852
BspHI	TCATGA	1 cut(s)	627
BspLI	GGNNCC	7 cut(s)	331, 416, 1118, 1351, 1531, 1572, 1848
BspMAI	CTGCAG	1 cut(s)	667
BspOI	GCTAGC	1 cut(s)	1829
BspPI	GGATC	3 cut(s)	1495, 1524, 1537
BspQI	GCTCTTC	1 cut(s)	525
BspT107I	GGYRCC	2 cut(s)	1570, 1846
BspTI	CTTAAG	1 cut(s)	1760
BsrGI	TGTACA	1 cut(s)	1145
BsrI	ACTGG	3 cut(s)	559, 866, 1847
BssECI	CCNNGG	3 cut(s)	54, 1817, 1850
BssMI	GATC	7 cut(s)	1140, 1384, 1487, 1529, 1645, 1711, 1749
BssNI	GRCGYC	1 cut(s)	1047
Bst2UI	CCWGG	2 cut(s)	1534, 1694
Bst4CI	ACNGT	1 cut(s)	1818
Bst6I	CTCTTC	2 cut(s)	525, 866
BstACI	GRCGYC	1 cut(s)	1047
BstAFI	CTTAAG	1 cut(s)	1760
BstAPI	GCANNNNNTGC	1 cut(s)	1445
BstAUI	TGTACA	1 cut(s)	1145
BstC8I	GCNNGC	3 cut(s)	42, 663, 1827
BstDEI	CTNAG	7 cut(s)	657, 741, 764, 781, 1086, 1426, 1458
BstDSI	CCRYGG	3 cut(s)	54, 1817, 1850
BstF5I	GGATG	4 cut(s)	776, 1667, 1827, 1843
BstFNI	CGCG	1 cut(s)	1852
BstH2I	RGCGCY	1 cut(s)	41
BstHHI	GCGC	2 cut(s)	40, 1439
BstKTI	GATC	7 cut(s)	1143, 1387, 1490, 1532, 1648, 1714, 1752
BstMAI	GTCTC	1 cut(s)	967
BstMBI	GATC	7 cut(s)	1140, 1384, 1487, 1529, 1645, 1711, 1749
BstMWI	GCNNNNNNNGC	4 cut(s)	50, 59, 404, 1445
BstNI	CCWGG	2 cut(s)	1534, 1694
BstNSI	RCATGY	1 cut(s)	287
BstSCI	CCNGG	3 cut(s)	786, 1532, 1692
BstSFI	CTRYAG	1 cut(s)	663
BstUI	CGCG	1 cut(s)	1852
BstV1I	GCAGC	2 cut(s)	344, 1778
BstX2I	RGATCY	2 cut(s)	1529, 1711
BstYI	RGATCY	2 cut(s)	1529, 1711
Bsu36I	CCTNAGG	2 cut(s)	781, 1458
BsuI	GTATCC	2 cut(s)	608, 967
BsuRI	GGCC	5 cut(s)	53, 407, 750, 786, 1731
BtgI	CCRYGG	3 cut(s)	54, 1817, 1850
BtgZI	GCGATG	1 cut(s)	1011
BtsCI	GGATG	4 cut(s)	776, 1667, 1827, 1843
BtsIMutI	CAGTG	2 cut(s)	873, 1710
Cac8I	GCNNGC	3 cut(s)	42, 663, 1827
CciI	TCATGA	1 cut(s)	627
CfoI	GCGC	2 cut(s)	40, 1439
Cfr13I	GGNCC	5 cut(s)	405, 749, 860, 1116, 1472
Cfr42I	CCGCGG	1 cut(s)	1853
CseI	GACGC	1 cut(s)	1055
Csp6I	GTAC	3 cut(s)	1146, 1847, 1922
CviQI	GTAC	3 cut(s)	1146, 1847, 1922
DdeI	CTNAG	7 cut(s)	657, 741, 764, 781, 1086, 1426, 1458
DpnI	GATC	7 cut(s)	1142, 1386, 1489, 1531, 1647, 1713, 1751
DpnII	GATC	7 cut(s)	1140, 1384, 1487, 1529, 1645, 1711, 1749
DraI	TTTAAA	1 cut(s)	1422
EaeI	YGGCCR	2 cut(s)	51, 1729
Eam1104I	CTCTTC	2 cut(s)	525, 866
EarI	CTCTTC	2 cut(s)	525, 866
Ecl136II	GAGCTC	1 cut(s)	878
Eco24I	GRGCYC	1 cut(s)	880
Eco47I	GGWCC	3 cut(s)	860, 1116, 1472
Eco53kI	GAGCTC	1 cut(s)	878
Eco57I	CTGAAG	3 cut(s)	912, 1350, 1626
Eco81I	CCTNAGG	2 cut(s)	781, 1458
Eco88I	CYCGRG	1 cut(s)	850
EcoICRI	GAGCTC	1 cut(s)	878
EcoO109I	RGGNCCY	1 cut(s)	1116
EcoRI	GAATTC	2 cut(s)	182, 254
EcoRII	CCWGG	2 cut(s)	1532, 1692
EcoT22I	ATGCAT	1 cut(s)	1814
EcoT38I	GRGCYC	1 cut(s)	880
FalI	AAGNNNNNCTT	6 cut(s)	376, 408, 537, 569, 1582, 1614
FaqI	GGGAC	1 cut(s)	1184
FauNDI	CATATG	1 cut(s)	1871
FbaI	TGATCA	1 cut(s)	1749
Fnu4HI	GCNGC	3 cut(s)	358, 1732, 1767
FokI	GGATG	4 cut(s)	763, 1654, 1834, 1850
FriOI	GRGCYC	1 cut(s)	880
Fsp4HI	GCNGC	3 cut(s)	358, 1732, 1767
FspBI	CTAG	6 cut(s)	179, 209, 846, 1725, 1784, 1826
GlaI	GCGC	2 cut(s)	39, 1438
GluI	GCNGC	3 cut(s)	358, 1732, 1767
GsuI	CTGGAG	2 cut(s)	146, 660
HaeII	RGCGCY	1 cut(s)	41
HaeIII	GGCC	5 cut(s)	53, 407, 750, 786, 1731
HapII	CCGG	1 cut(s)	787
HgaI	GACGC	1 cut(s)	1055
HhaI	GCGC	2 cut(s)	40, 1439
Hin1I	GRCGYC	1 cut(s)	1047
Hin6I	GCGC	2 cut(s)	38, 1437
HinP1I	GCGC	2 cut(s)	38, 1437
HincII	GTYRAC	3 cut(s)	1237, 1380, 1879
HindII	GTYRAC	3 cut(s)	1237, 1380, 1879
HpaI	GTTAAC	1 cut(s)	1879
HpaII	CCGG	1 cut(s)	787
HphI	GGTGA	2 cut(s)	1145, 1442
Hpy166II	GTNNAC	5 cut(s)	863, 1237, 1380, 1659, 1879
Hpy8I	GTNNAC	5 cut(s)	863, 1237, 1380, 1659, 1879
HpyAV	CCTTC	8 cut(s)	244, 493, 694, 887, 1325, 1427, 1613, 1650
HpyCH4III	ACNGT	1 cut(s)	1818
HpyCH4IV	ACGT	1 cut(s)	1269
HpyCH4V	TGCA	9 cut(s)	287, 360, 574, 665, 1448, 1517, 1789, 1812, 1941
HpyF10VI	GCNNNNNNNGC	4 cut(s)	50, 59, 404, 1445
HpyF3I	CTNAG	7 cut(s)	657, 741, 764, 781, 1086, 1426, 1458
HpySE526I	ACGT	1 cut(s)	1269
Hsp92I	GRCGYC	1 cut(s)	1047
HspAI	GCGC	2 cut(s)	38, 1437
KpnI	GGTACC	1 cut(s)	1850
Ksp22I	TGATCA	1 cut(s)	1749
KspAI	GTTAAC	1 cut(s)	1879
KspI	CCGCGG	1 cut(s)	1853
Kzo9I	GATC	7 cut(s)	1140, 1384, 1487, 1529, 1645, 1711, 1749
LguI	GCTCTTC	1 cut(s)	525
LmnI	GCTCC	2 cut(s)	658, 1867
Lsp1109I	GCAGC	2 cut(s)	344, 1778
LweI	GCATC	5 cut(s)	539, 958, 1435, 1526, 1812
MaeI	CTAG	6 cut(s)	179, 209, 846, 1725, 1784, 1826
MaeII	ACGT	1 cut(s)	1269
MaeIII	GTNAC	3 cut(s)	590, 1124, 1620
MalI	GATC	7 cut(s)	1142, 1386, 1489, 1531, 1647, 1713, 1751
MboI	GATC	7 cut(s)	1140, 1384, 1487, 1529, 1645, 1711, 1749
MboII	GAAGA	7 cut(s)	369, 512, 684, 803, 883, 1406, 1867
MflI	RGATCY	2 cut(s)	1529, 1711
MhlI	GDGCHC	1 cut(s)	880
MlyI	GAGTC	2 cut(s)	161, 1691
Mph1103I	ATGCAT	1 cut(s)	1814
MroXI	GAANNNNTTC	2 cut(s)	222, 254
MseI	TTAA	8 cut(s)	350, 422, 605, 926, 1155, 1421, 1761, 1878
MslI	CAYNNNNRTG	1 cut(s)	1064
MspA1I	CMGCKG	1 cut(s)	1852
MspCI	CTTAAG	1 cut(s)	1760
MspI	CCGG	1 cut(s)	787
MspR9I	CCNGG	3 cut(s)	788, 1534, 1694
MvaI	CCWGG	2 cut(s)	1534, 1694
MvnI	CGCG	1 cut(s)	1852
MwoI	GCNNNNNNNGC	4 cut(s)	50, 59, 404, 1445
NciI	CCSGG	1 cut(s)	788
NdeI	CATATG	1 cut(s)	1871
NdeII	GATC	7 cut(s)	1140, 1384, 1487, 1529, 1645, 1711, 1749
NheI	GCTAGC	1 cut(s)	1825
NlaIV	GGNNCC	7 cut(s)	331, 416, 1118, 1351, 1531, 1572, 1848
NsiI	ATGCAT	1 cut(s)	1814
NspI	RCATGY	1 cut(s)	287
PagI	TCATGA	1 cut(s)	627
PciSI	GCTCTTC	1 cut(s)	525
PdmI	GAANNNNTTC	2 cut(s)	222, 254
PflFI	GACNNNGTC	2 cut(s)	822, 1102
PkrI	GCNGC	3 cut(s)	359, 1733, 1768
PleI	GAGTC	2 cut(s)	160, 1691
PpsI	GAGTC	2 cut(s)	160, 1691
PpuMI	RGGWCCY	1 cut(s)	1116
Psp124BI	GAGCTC	1 cut(s)	880
Psp5II	RGGWCCY	1 cut(s)	1116
Psp6I	CCWGG	2 cut(s)	1532, 1692
PspGI	CCWGG	2 cut(s)	1532, 1692
PspN4I	GGNNCC	7 cut(s)	331, 416, 1118, 1351, 1531, 1572, 1848
PspPI	GGNCC	5 cut(s)	405, 749, 860, 1116, 1472
PspPPI	RGGWCCY	1 cut(s)	1116
PsrI	GAACNNNNNNTAC	2 cut(s)	189, 221
PstI	CTGCAG	1 cut(s)	667
PsuI	RGATCY	2 cut(s)	1529, 1711
PsyI	GACNNNGTC	2 cut(s)	822, 1102
RsaI	GTAC	3 cut(s)	1147, 1848, 1923
RsaNI	GTAC	3 cut(s)	1146, 1847, 1922
RseI	CAYNNNNRTG	1 cut(s)	1064
SacI	GAGCTC	1 cut(s)	880
SacII	CCGCGG	1 cut(s)	1853
SapI	GCTCTTC	1 cut(s)	525
SaqAI	TTAA	8 cut(s)	350, 422, 605, 926, 1155, 1421, 1761, 1878
SatI	GCNGC	3 cut(s)	358, 1732, 1767
Sau3AI	GATC	7 cut(s)	1140, 1384, 1487, 1529, 1645, 1711, 1749
Sau96I	GGNCC	5 cut(s)	405, 749, 860, 1116, 1472
SchI	GAGTC	2 cut(s)	161, 1691
ScrFI	CCNGG	3 cut(s)	788, 1534, 1694
SduI	GDGCHC	1 cut(s)	880
SfaNI	GCATC	5 cut(s)	539, 958, 1435, 1526, 1812
SfcI	CTRYAG	1 cut(s)	663
Sfr303I	CCGCGG	1 cut(s)	1853
SgrBI	CCGCGG	1 cut(s)	1853
SinI	GGWCC	3 cut(s)	860, 1116, 1472
SmiMI	CAYNNNNRTG	1 cut(s)	1064
SmlI	CTYRAG	3 cut(s)	135, 1715, 1760
SmoI	CTYRAG	3 cut(s)	135, 1715, 1760
SpeI	ACTAGT	1 cut(s)	1724
SsiI	CCGC	9 cut(s)	371, 441, 971, 1259, 1618, 1732, 1850, 1852, 1890
SspI	AATATT	3 cut(s)	635, 1159, 1614
SspMI	CTAG	6 cut(s)	179, 209, 846, 1725, 1784, 1826
SstI	GAGCTC	1 cut(s)	880
StyD4I	CCNGG	3 cut(s)	786, 1532, 1692
TaaI	ACNGT	1 cut(s)	1818
TaiI	ACGT	1 cut(s)	1272
TaqI	TCGA	4 cut(s)	698, 716, 817, 1606
TatI	WGTACW	1 cut(s)	1145
TauI	GCSGC	1 cut(s)	1734
Tru1I	TTAA	8 cut(s)	350, 422, 605, 926, 1155, 1421, 1761, 1878
Tru9I	TTAA	8 cut(s)	350, 422, 605, 926, 1155, 1421, 1761, 1878
TscAI	CASTG	2 cut(s)	873, 1710
TseI	GCWGC	2 cut(s)	357, 1766
TspDTI	ATGAA	7 cut(s)	480, 616, 644, 765, 996, 1082, 1858
TspGWI	ACGGA	1 cut(s)	1763
TspRI	CASTG	2 cut(s)	873, 1710
Tth111I	GACNNNGTC	2 cut(s)	822, 1102
Vha464I	CTTAAG	1 cut(s)	1760
VpaK11BI	GGWCC	3 cut(s)	860, 1116, 1472
XapI	RAATTY	9 cut(s)	182, 254, 581, 812, 898, 1018, 1397, 1552, 1909
XbaI	TCTAGA	1 cut(s)	208
XceI	RCATGY	1 cut(s)	287
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1057
XmnI	GAANNNNTTC	2 cut(s)	222, 254
XspI	CTAG	6 cut(s)	179, 209, 846, 1725, 1784, 1826
Zsp2I	ATGCAT	1 cut(s)	1814

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.