FvH4_5g25330

Glycosyl transferase family 2

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0013319
Physical Location & Seq
Forward (+)
16877565 .. 16879924
2360 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g25330.t1

Sequence Viewer

Length: 1743 bp
ATGAAGTCCACCCAAAATAAGCCACCACAACAAACCCAAACCCTCTTCTTCTTCTTCTCCTTTCAAACCCTCTCCGCCATGCGCCGCAGGCTCTCCGCTGCCCTCCTTATCTCCCTCGCCGTCCTCTTCCTCTTCGCCTCCATCTCTCTCCACCTCTCCCGCTCCTCCATCTCCCGCTCCGACCTCGTCACCTGCTACCCCATCCCCAGCCCCACCTCCGATCTCATCCGCGAGCTCCAGTCTCCTCCGTCCATCCACGTCAACGTCGACCCCATCTCCACCGTCGCCGTGCTTCTACCTGACTGGGAGATCCTCGTTATTGTCTCGCCTGAGACTCCGCTCTCCGCCGGCCACCACGGTTATGTCTGCGTGTTCCAGAACAACTACACCTCCGATGCTAAACTCGCCGGGATTCTGCCGTCGAGGAACCGGACGGCGTTCTACTGCCTCATGCCGCGGAGAGTCAAGCGCCTCCGGCCGTTTCTCCAGCCGGCCTTGTCCACGAGGTTGCATCACATCAACACCAACAAACATGCACCGGAGCTTTTCCGGTGGACGTTTCTCGTCTACGAGTCCTTCTCCACCGTAGACGACGTCGTTCTCTTCGCCAAAGGCCTCAACAACCGCCCCGGCGTCAACCGCCCTCCGAGCGAGTTCCGGTGCGTGTTCGGCGATAACGCCGTCAGAACCGCCGTCACGAGCTCTTCTCAAGAAGTCTTCCGCTGCCAGCACCCGGACCTGACGGCGTTAAACGACGCCGTCAACGCCACGACTATCTCACTGGAAATCGTCGAGAAGAATCAGGTGGTCCCCTCCGTGGCTTATTACACCTCCCCCAAACGACGTCGGATTATTAGCGGCAGCGATCTTATCGCGGGGCACACGCAACCGAGTCACGAGCTGTGCGCGTGCACGATGGTGTACAACGTGGCGAAGGTCCTGAGGGAGTGGGTGACATACCATTCTCGGATCGGAGTCGACCGGTTTTTTCTTTACGACAACGACAGCGACGACGACTTGGGACACGTGGTGCGGCAGCTAAACCGGGAAGGGTTCAACATTACGACGACATTTTGGATATGGCCTAAGACACAAGAAGCTGGGTTCTCCCACGCTGCCGTGTTCGGCAAGTCGTTGTGCAAATGGATGATGTACATTGACGTCGACGAGTTTGTTTTCGCCCCGAATGCATGGAGCCAGGCTCCGGCGCCGGAGAGGCACATGCTCAAGTCTCTGATACCGAAGGAGCCGGATATCGGGCAAGTTTCGATCCTATGCAACGAGTTTGGCCCCTCGAATCAGAAAACGCACCCATTGGAAGGTGTCACGCAGGGGTACACATGCCGGAGGCGGTTGGGGCGGTTGCAGCAGCGGCACAAGTCGATTGTGCTGCTCGAGGCGGTTGAGCACTCGCTGCTCAACATGATACACCATTTTCAGATAAAGAAGGAGTTTAGGTCATGGCAACTCAGCATGGAGGAAGCTATAGTGAACCATTATAAGTACCAAGCTTGGCCCGAGTTTCAGACCAAGTTTCGTAGAAGGGTGTCGGCTTACGTGGTGGATTGGACTGAGAAGGTTAATCCGGCATCCAAGGATAGAGCTCCCGGGCTAGGGTTTAAGCCGGTGAAGCCGAATGGGTGGGAGGACATGTTTTGTGAGGTTAGGGATGAGAGGTTAACGATGTTGACGAAGAAATGGTTTGGTTCTCCTAGTAGTAGTAAAATGGTGTGGCAAAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Glyco_transf_92

Protein Analysis

581

Amino Acids

66.32

Weight (kDa)

9.28

Isoelectric Point (pI)

51.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_92 PF01697 300 - 524 8e-31 Glycosyltransferase family 92
Glyco_tranf_2_4 PF13704 309 - 397 2e-12 Glycosyl transferase family 2
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013319)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G37420
fragaria_vesca FvH4_5g25330
malus_domestica MD06G1009800.v1.1
prunus_persica Prupe.5G010400_v2.0.a1
pyrus_communis pycom04g11530 pycom06g00810 pycom09g12170
rosa_chinensis RchiOBHm_Chr7g0215561
rosa_laevigata RLG00000002648
rosa_multiflora Rmu_co8335425.1_g000001 Rmu_sc0000898.1_g000091 Rmu_sc0021889.1_g000001
rosa_roxburghii Rroxscaffold_3G00244110
rosa_samantha Rh7AG291000 Rh7BG283100 Rh7CG311000 Rh7DG294600
rosa_wichuraiana Rw7G024840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1500
AarI CACCTGC 1 cut(s) 200
AatII GACGTC 3 cut(s) 597, 847, 1164
Acc36I ACCTGC 1 cut(s) 200
AccB1I GGYRCC 1 cut(s) 1207
AccBSI CCGCTC 3 cut(s) 162, 177, 340
AccI GTMKAC 5 cut(s) 267, 567, 588, 978, 1164
AccII CGCG 4 cut(s) 231, 457, 875, 908
AclWI GGATC 3 cut(s) 304, 977, 1264
AcoI YGGCCR 2 cut(s) 349, 476
AcvI CACGTG 1 cut(s) 1027
AcyI GRCGYC 6 cut(s) 594, 633, 756, 844, 1161, 1208
AdeI CACNNNGTG 1 cut(s) 1030
AfaI GTAC 4 cut(s) 923, 1154, 1337, 1505
AfiI CCNNNNNNNGG 7 cut(s) 733, 817, 1204, 1256, 1319, 1613, 1614
AflIII ACRYGT 2 cut(s) 1024, 1650
AgeI ACCGGT 1 cut(s) 981
AgsI TTSAA 2 cut(s) 65, 1057
AjiI CACGTC 1 cut(s) 259
AjnI CCWGG 1 cut(s) 1197
AleI CACNNNNGTG 1 cut(s) 917
AluBI AGCT 9 cut(s) 235, 544, 702, 901, 1039, 1100, 1484, 1511, 1604
AluI AGCT 9 cut(s) 235, 544, 702, 901, 1039, 1100, 1484, 1511, 1604
Alw21I GWGCWC 5 cut(s) 237, 704, 914, 1410, 1606
Alw26I GTCTC 4 cut(s) 246, 326, 328, 1236
Alw44I GTGCAC 1 cut(s) 910
AlwI GGATC 3 cut(s) 304, 977, 1264
Ama87I CYCGRG 3 cut(s) 1394, 1517, 1607
AoxI GGCC 7 cut(s) 349, 476, 492, 613, 1082, 1288, 1514
ApaLI GTGCAC 1 cut(s) 910
ApeKI GCWGC 9 cut(s) 98, 723, 861, 1036, 1115, 1366, 1369, 1390, 1414
AsiGI ACCGGT 1 cut(s) 981
AspLEI GCGC 4 cut(s) 84, 471, 908, 1210
AspS9I GGNCC 5 cut(s) 736, 808, 937, 1289, 1515
AsuC2I CCSGG 6 cut(s) 409, 630, 734, 1046, 1608, 1609
AsuHPI GGTGA 3 cut(s) 181, 964, 1639
AvaI CYCGRG 3 cut(s) 1394, 1517, 1607
AvaII GGWCC 3 cut(s) 736, 808, 937
AxyI CCTNAGG 1 cut(s) 941
BaeGI GKGCMC 2 cut(s) 882, 914
BanI GGYRCC 1 cut(s) 1207
BanII GRGCYC 3 cut(s) 237, 704, 1606
BauI CACGAG 3 cut(s) 502, 697, 896
BbrPI CACGTG 1 cut(s) 1027
BbsI GAAGAC 1 cut(s) 709
Bbv12I GWGCWC 5 cut(s) 237, 704, 914, 1410, 1606
BbvI GCAGC 9 cut(s) 85, 710, 873, 1048, 1102, 1377, 1378, 1381, 1401
BccI CCATC 6 cut(s) 149, 176, 209, 260, 281, 910
BcgI CGANNNNNNTGC 2 cut(s) 1372, 1406
BciT130I CCWGG 1 cut(s) 1199
BcnI CCSGG 6 cut(s) 409, 630, 734, 1046, 1608, 1609
BcoDI GTCTC 4 cut(s) 246, 326, 328, 1236
BfaI CTAG 2 cut(s) 1613, 1713
BfmI CTRYAG 1 cut(s) 1485
BfoI RGCGCY 2 cut(s) 472, 1211
BfuAI ACCTGC 1 cut(s) 200
BglI GCCNNNNNGGC 1 cut(s) 1216
Bme1390I CCNGG 7 cut(s) 409, 630, 734, 1046, 1199, 1608, 1609
Bme18I GGWCC 3 cut(s) 736, 808, 937
BmeT110I CYCGRG 3 cut(s) 1394, 1517, 1607
BmgBI CACGTC 1 cut(s) 259
BmgT120I GGNCC 5 cut(s) 736, 808, 937, 1289, 1515
BmiI GGNNCC 7 cut(s) 428, 810, 1196, 1203, 1209, 1248, 1291
BmrFI CCNGG 7 cut(s) 409, 630, 734, 1046, 1199, 1608, 1609
BmrI ACTGGG 1 cut(s) 313
BmsI GCATC 3 cut(s) 385, 520, 1598
BmuI ACTGGG 1 cut(s) 313
BpiI GAAGAC 1 cut(s) 709
BplI GAGNNNNNCTC 6 cut(s) 563, 595, 691, 723, 1186, 1218
BpmI CTGGAG 2 cut(s) 221, 470
BpuEI CTTGAG 2 cut(s) 693, 1211
BpuMI CCSGG 6 cut(s) 409, 630, 734, 1046, 1608, 1609
BsaAI YACGTR 2 cut(s) 1027, 1558
BsaHI GRCGYC 6 cut(s) 594, 633, 756, 844, 1161, 1208
BsaJI CCNNGG 6 cut(s) 355, 455, 628, 816, 1593, 1607
BsaWI WCCGGW 5 cut(s) 429, 538, 549, 657, 981
BsaXI ACNNNNNCTCC 8 cut(s) 260, 290, 374, 404, 1442, 1472, 1637, 1667
Bsc4I CCNNNNNNNGG 7 cut(s) 733, 817, 1204, 1256, 1319, 1613, 1614
Bse118I RCCGGY 4 cut(s) 347, 490, 981, 1624
Bse1I ACTGG 3 cut(s) 238, 308, 786
Bse21I CCTNAGG 1 cut(s) 941
BseBI CCWGG 1 cut(s) 1199
BseDI CCNNGG 6 cut(s) 355, 455, 628, 816, 1593, 1607
BseGI GGATG 6 cut(s) 201, 225, 252, 1152, 1589, 1675
BseLI CCNNNNNNNGG 7 cut(s) 733, 817, 1204, 1256, 1319, 1613, 1614
BseMII CTCAG 4 cut(s) 321, 932, 1483, 1563
BseNI ACTGG 3 cut(s) 238, 308, 786
BseRI GAGGAG 2 cut(s) 154, 234
BseSI GKGCMC 2 cut(s) 882, 914
BseX3I CGGCCG 1 cut(s) 476
BseXI GCAGC 9 cut(s) 85, 710, 873, 1048, 1102, 1377, 1378, 1381, 1401
BseYI CCCAGC 2 cut(s) 206, 1100
Bsh1236I CGCG 4 cut(s) 231, 457, 875, 908
Bsh1285I CGRYCG 2 cut(s) 479, 982
BshFI GGCC 7 cut(s) 351, 478, 494, 615, 1084, 1290, 1516
BshNI GGYRCC 1 cut(s) 1207
BshTI ACCGGT 1 cut(s) 981
BsiEI CGRYCG 2 cut(s) 479, 982
BsiHKAI GWGCWC 5 cut(s) 237, 704, 914, 1410, 1606
BsiHKCI CYCGRG 3 cut(s) 1394, 1517, 1607
BslFI GGGAC 2 cut(s) 794, 1035
BslI CCNNNNNNNGG 7 cut(s) 733, 817, 1204, 1256, 1319, 1613, 1614
BsmAI GTCTC 4 cut(s) 246, 326, 328, 1236
BsmFI GGGAC 2 cut(s) 794, 1035
BsmI GAATGC 1 cut(s) 1192
BsnI GGCC 7 cut(s) 351, 478, 494, 615, 1084, 1290, 1516
BsoBI CYCGRG 3 cut(s) 1394, 1517, 1607
Bsp1286I GDGCHC 6 cut(s) 237, 704, 882, 914, 1410, 1606
Bsp1407I TGTACA 2 cut(s) 921, 1152
Bsp143I GATC 5 cut(s) 220, 309, 865, 969, 1269
BspANI GGCC 7 cut(s) 351, 478, 494, 615, 1084, 1290, 1516
BspCNI CTCAG 4 cut(s) 322, 933, 1482, 1564
BspFNI CGCG 4 cut(s) 231, 457, 875, 908
BspLI GGNNCC 7 cut(s) 428, 810, 1196, 1203, 1209, 1248, 1291
BspMI ACCTGC 1 cut(s) 200
BspPI GGATC 3 cut(s) 304, 977, 1264
BspQI GCTCTTC 1 cut(s) 709
BspT107I GGYRCC 1 cut(s) 1207
BsrBI CCGCTC 3 cut(s) 162, 177, 340
BsrFI RCCGGY 4 cut(s) 347, 490, 981, 1624
BsrGI TGTACA 2 cut(s) 921, 1152
BsrI ACTGG 3 cut(s) 238, 308, 786
BssAI RCCGGY 4 cut(s) 347, 490, 981, 1624
BssECI CCNNGG 6 cut(s) 355, 455, 628, 816, 1593, 1607
BssMI GATC 5 cut(s) 220, 309, 865, 969, 1269
BssNI GRCGYC 6 cut(s) 594, 633, 756, 844, 1161, 1208
BssSI CACGAG 3 cut(s) 502, 697, 896
BssT1I CCWWGG 1 cut(s) 1593
Bst2BI CACGAG 3 cut(s) 502, 697, 896
Bst2UI CCWGG 1 cut(s) 1199
Bst4CI ACNGT 3 cut(s) 283, 359, 586
Bst6I CTCTTC 5 cut(s) 50, 131, 137, 608, 709
BstACI GRCGYC 6 cut(s) 594, 633, 756, 844, 1161, 1208
BstAPI GCANNNNNTGC 1 cut(s) 1414
BstAUI TGTACA 2 cut(s) 921, 1152
BstBAI YACGTR 2 cut(s) 1027, 1558
BstC8I GCNNGC 6 cut(s) 89, 233, 349, 492, 728, 910
BstDEI CTNAG 5 cut(s) 330, 941, 1086, 1469, 1572
BstDSI CCRYGG 3 cut(s) 355, 455, 816
BstF5I GGATG 6 cut(s) 201, 225, 252, 1152, 1589, 1675
BstFNI CGCG 4 cut(s) 231, 457, 875, 908
BstH2I RGCGCY 2 cut(s) 472, 1211
BstHHI GCGC 4 cut(s) 84, 471, 908, 1210
BstKTI GATC 5 cut(s) 223, 312, 868, 972, 1272
BstMAI GTCTC 4 cut(s) 246, 326, 328, 1236
BstMBI GATC 5 cut(s) 220, 309, 865, 969, 1269
BstMCI CGRYCG 2 cut(s) 479, 982
BstNI CCWGG 1 cut(s) 1199
BstNSI RCATGY 4 cut(s) 536, 1225, 1344, 1654
BstSCI CCNGG 7 cut(s) 407, 628, 732, 1044, 1197, 1606, 1607
BstSFI CTRYAG 1 cut(s) 1485
BstSLI GKGCMC 2 cut(s) 882, 914
BstUI CGCG 4 cut(s) 231, 457, 875, 908
BstV1I GCAGC 9 cut(s) 85, 710, 873, 1048, 1102, 1377, 1378, 1381, 1401
BstV2I GAAGAC 1 cut(s) 709
BstX2I RGATCY 1 cut(s) 309
BstYI RGATCY 1 cut(s) 309
BstZI CGGCCG 1 cut(s) 476
Bsu36I CCTNAGG 1 cut(s) 941
BsuRI GGCC 7 cut(s) 351, 478, 494, 615, 1084, 1290, 1516
BtgI CCRYGG 3 cut(s) 355, 455, 816
BtrI CACGTC 1 cut(s) 259
BtsCI GGATG 6 cut(s) 201, 225, 252, 1152, 1589, 1675
BtsIMutI CAGTG 1 cut(s) 779
BveI ACCTGC 1 cut(s) 200
Cac8I GCNNGC 6 cut(s) 89, 233, 349, 492, 728, 910
CfoI GCGC 4 cut(s) 84, 471, 908, 1210
Cfr10I RCCGGY 4 cut(s) 347, 490, 981, 1624
Cfr13I GGNCC 5 cut(s) 736, 808, 937, 1289, 1515
Cfr42I CCGCGG 1 cut(s) 458
Cfr9I CCCGGG 1 cut(s) 1607
CseI GACGC 2 cut(s) 622, 764
Csp6I GTAC 4 cut(s) 922, 1153, 1336, 1504
CspAI ACCGGT 1 cut(s) 981
CviQI GTAC 4 cut(s) 922, 1153, 1336, 1504
DdeI CTNAG 5 cut(s) 330, 941, 1086, 1469, 1572
DinI GGCGCC 1 cut(s) 1209
DpnI GATC 5 cut(s) 222, 311, 867, 971, 1271
DpnII GATC 5 cut(s) 220, 309, 865, 969, 1269
DraIII CACNNNGTG 1 cut(s) 1030
EaeI YGGCCR 2 cut(s) 349, 476
EagI CGGCCG 1 cut(s) 476
Eam1104I CTCTTC 5 cut(s) 50, 131, 137, 608, 709
EarI CTCTTC 5 cut(s) 50, 131, 137, 608, 709
EciI GGCGGA 2 cut(s) 64, 334
Ecl136II GAGCTC 3 cut(s) 235, 702, 1604
EclXI CGGCCG 1 cut(s) 476
Eco130I CCWWGG 1 cut(s) 1593
Eco147I AGGCCT 1 cut(s) 615
Eco24I GRGCYC 3 cut(s) 237, 704, 1606
Eco32I GATATC 1 cut(s) 1255
Eco47I GGWCC 3 cut(s) 736, 808, 937
Eco52I CGGCCG 1 cut(s) 476
Eco53kI GAGCTC 3 cut(s) 235, 702, 1604
Eco72I CACGTG 1 cut(s) 1027
Eco81I CCTNAGG 1 cut(s) 941
Eco88I CYCGRG 3 cut(s) 1394, 1517, 1607
EcoICRI GAGCTC 3 cut(s) 235, 702, 1604
EcoO109I RGGNCCY 1 cut(s) 937
EcoRII CCWGG 1 cut(s) 1197
EcoRV GATATC 1 cut(s) 1255
EcoT14I CCWWGG 1 cut(s) 1593
EcoT22I ATGCAT 1 cut(s) 1192
EcoT38I GRGCYC 3 cut(s) 237, 704, 1606
EgeI GGCGCC 1 cut(s) 1209
EheI GGCGCC 1 cut(s) 1209
ErhI CCWWGG 1 cut(s) 1593
FaqI GGGAC 2 cut(s) 794, 1035
FauI CCCGC 3 cut(s) 167, 182, 868
FblI GTMKAC 5 cut(s) 267, 567, 588, 978, 1164
FokI GGATG 6 cut(s) 188, 212, 239, 1159, 1576, 1682
FriOI GRGCYC 3 cut(s) 237, 704, 1606
FspBI CTAG 2 cut(s) 1613, 1713
GlaI GCGC 4 cut(s) 83, 470, 907, 1209
GsaI CCCAGC 2 cut(s) 210, 1104
GsuI CTGGAG 2 cut(s) 221, 470
HaeII RGCGCY 2 cut(s) 472, 1211
HaeIII GGCC 7 cut(s) 351, 478, 494, 615, 1084, 1290, 1516
HgaI GACGC 2 cut(s) 622, 764
HhaI GCGC 4 cut(s) 84, 471, 908, 1210
Hin1I GRCGYC 6 cut(s) 594, 633, 756, 844, 1161, 1208
Hin6I GCGC 4 cut(s) 82, 469, 906, 1208
HinP1I GCGC 4 cut(s) 82, 469, 906, 1208
HincII GTYRAC 8 cut(s) 262, 268, 637, 763, 979, 1165, 1680, 1689
HindII GTYRAC 8 cut(s) 262, 268, 637, 763, 979, 1165, 1680, 1689
HindIII AAGCTT 1 cut(s) 1509
HinfI GANTC 8 cut(s) 334, 412, 462, 572, 799, 892, 975, 1297
HpaI GTTAAC 1 cut(s) 1680
HphI GGTGA 3 cut(s) 181, 964, 1639
Hpy188III TCNNGA 6 cut(s) 376, 697, 710, 793, 896, 940
HpyAV CCTTC 8 cut(s) 586, 928, 1043, 1237, 1313, 1441, 1536, 1570
HpyCH4III ACNGT 3 cut(s) 283, 359, 586
HpyCH4IV ACGT 9 cut(s) 258, 264, 557, 594, 844, 927, 1026, 1161, 1557
HpyCH4V TGCA 7 cut(s) 511, 536, 912, 1140, 1190, 1278, 1366
HpyF3I CTNAG 5 cut(s) 330, 941, 1086, 1469, 1572
HpySE526I ACGT 9 cut(s) 258, 264, 557, 594, 844, 927, 1026, 1161, 1557
Hsp92I GRCGYC 6 cut(s) 594, 633, 756, 844, 1161, 1208
HspAI GCGC 4 cut(s) 82, 469, 906, 1208
KasI GGCGCC 1 cut(s) 1207
KroI GCCGGC 2 cut(s) 347, 490
KroNI GCCGGC 2 cut(s) 349, 492
KspAI GTTAAC 1 cut(s) 1680
KspI CCGCGG 1 cut(s) 458
Kzo9I GATC 5 cut(s) 220, 309, 865, 969, 1269
LguI GCTCTTC 1 cut(s) 709
LmnI GCTCC 8 cut(s) 167, 182, 240, 541, 1194, 1207, 1246, 1609
Lsp1109I GCAGC 9 cut(s) 85, 710, 873, 1048, 1102, 1377, 1378, 1381, 1401
LweI GCATC 3 cut(s) 385, 520, 1598
MaeI CTAG 2 cut(s) 1613, 1713
MaeII ACGT 9 cut(s) 258, 264, 557, 594, 844, 927, 1026, 1161, 1557
MaeIII GTNAC 5 cut(s) 187, 694, 893, 952, 1324
MalI GATC 5 cut(s) 222, 311, 867, 971, 1271
MbiI CCGCTC 3 cut(s) 162, 177, 340
MboI GATC 5 cut(s) 220, 309, 865, 969, 1269
MflI RGATCY 1 cut(s) 309
MhlI GDGCHC 6 cut(s) 237, 704, 882, 914, 1410, 1606
Mly113I GGCGCC 1 cut(s) 1208
MlyI GAGTC 5 cut(s) 328, 471, 581, 901, 984
MmeI TCCRAC 2 cut(s) 204, 827
Mph1103I ATGCAT 1 cut(s) 1192
MroNI GCCGGC 2 cut(s) 347, 490
MseI TTAA 4 cut(s) 749, 1581, 1620, 1679
MslI CAYNNNNRTG 2 cut(s) 360, 917
MspA1I CMGCKG 4 cut(s) 98, 457, 723, 1372
MspR9I CCNGG 7 cut(s) 409, 630, 734, 1046, 1199, 1608, 1609
Mva1269I GAATGC 1 cut(s) 1192
MvaI CCWGG 1 cut(s) 1199
MvnI CGCG 4 cut(s) 231, 457, 875, 908
NaeI GCCGGC 2 cut(s) 349, 492
NarI GGCGCC 1 cut(s) 1208
NciI CCSGG 6 cut(s) 409, 630, 734, 1046, 1608, 1609
NdeII GATC 5 cut(s) 220, 309, 865, 969, 1269
NgoMIV GCCGGC 2 cut(s) 347, 490
NlaIV GGNNCC 7 cut(s) 428, 810, 1196, 1203, 1209, 1248, 1291
NmuCI GTSAC 5 cut(s) 187, 694, 893, 952, 1324
NsiI ATGCAT 1 cut(s) 1192
NspI RCATGY 4 cut(s) 536, 1225, 1344, 1654
OliI CACNNNNGTG 1 cut(s) 917
PaeR7I CTCGAG 1 cut(s) 1394
PaqCI CACCTGC 1 cut(s) 200
PceI AGGCCT 1 cut(s) 615
PciI ACATGT 1 cut(s) 1650
PciSI GCTCTTC 1 cut(s) 709
PcsI WCGNNNNNNNCGW 3 cut(s) 264, 1008, 1688
PctI GAATGC 1 cut(s) 1192
PdiI GCCGGC 2 cut(s) 349, 492
PfeI GAWTC 3 cut(s) 412, 799, 1297
PflFI GACNNNGTC 3 cut(s) 185, 593, 758
PinAI ACCGGT 1 cut(s) 981
PleI GAGTC 5 cut(s) 328, 470, 580, 900, 983
PluTI GGCGCC 1 cut(s) 1211
PmaCI CACGTG 1 cut(s) 1027
PmlI CACGTG 1 cut(s) 1027
PpsI GAGTC 5 cut(s) 328, 470, 580, 900, 983
Ppu21I YACGTR 2 cut(s) 1027, 1558
PpuMI RGGWCCY 1 cut(s) 937
PscI ACATGT 1 cut(s) 1650
PsiI TTATAA 1 cut(s) 1500
Psp124BI GAGCTC 3 cut(s) 237, 704, 1606
Psp5II RGGWCCY 1 cut(s) 937
Psp6I CCWGG 1 cut(s) 1197
PspCI CACGTG 1 cut(s) 1027
PspFI CCCAGC 2 cut(s) 206, 1100
PspGI CCWGG 1 cut(s) 1197
PspN4I GGNNCC 7 cut(s) 428, 810, 1196, 1203, 1209, 1248, 1291
PspPI GGNCC 5 cut(s) 736, 808, 937, 1289, 1515
PspPPI RGGWCCY 1 cut(s) 937
PspXI VCTCGAGB 1 cut(s) 1394
PsuI RGATCY 1 cut(s) 309
PsyI GACNNNGTC 3 cut(s) 185, 593, 758
RsaI GTAC 4 cut(s) 923, 1154, 1337, 1505
RsaNI GTAC 4 cut(s) 922, 1153, 1336, 1504
RseI CAYNNNNRTG 2 cut(s) 360, 917
SacI GAGCTC 3 cut(s) 237, 704, 1606
SacII CCGCGG 1 cut(s) 458
SalI GTCGAC 3 cut(s) 266, 977, 1163
SapI GCTCTTC 1 cut(s) 709
SaqAI TTAA 4 cut(s) 749, 1581, 1620, 1679
Sau3AI GATC 5 cut(s) 220, 309, 865, 969, 1269
Sau96I GGNCC 5 cut(s) 736, 808, 937, 1289, 1515
SchI GAGTC 5 cut(s) 328, 471, 581, 901, 984
ScrFI CCNGG 7 cut(s) 409, 630, 734, 1046, 1199, 1608, 1609
SduI GDGCHC 6 cut(s) 237, 704, 882, 914, 1410, 1606
SfaNI GCATC 3 cut(s) 385, 520, 1598
SfcI CTRYAG 1 cut(s) 1485
SfoI GGCGCC 1 cut(s) 1209
Sfr274I CTCGAG 1 cut(s) 1394
Sfr303I CCGCGG 1 cut(s) 458
SgrBI CCGCGG 1 cut(s) 458
SgrDI CGTCGACG 1 cut(s) 1163
SinI GGWCC 3 cut(s) 736, 808, 937
SlaI CTCGAG 1 cut(s) 1394
SmaI CCCGGG 1 cut(s) 1609
SmiMI CAYNNNNRTG 2 cut(s) 360, 917
SmlI CTYRAG 3 cut(s) 708, 1226, 1394
SmoI CTYRAG 3 cut(s) 708, 1226, 1394
SseBI AGGCCT 1 cut(s) 615
SspDI GGCGCC 1 cut(s) 1207
SspMI CTAG 2 cut(s) 1613, 1713
SstI GAGCTC 3 cut(s) 237, 704, 1606
StuI AGGCCT 1 cut(s) 615
StyD4I CCNGG 7 cut(s) 407, 628, 732, 1044, 1197, 1606, 1607
StyI CCWWGG 1 cut(s) 1593
TaaI ACNGT 3 cut(s) 283, 359, 586
TaiI ACGT 9 cut(s) 261, 267, 560, 597, 847, 930, 1029, 1164, 1560
TaqI TCGA 9 cut(s) 267, 422, 792, 978, 1164, 1268, 1295, 1382, 1395
TatI WGTACW 2 cut(s) 921, 1152
TauI GCSGC 5 cut(s) 87, 457, 861, 1036, 1375
TfiI GAWTC 3 cut(s) 412, 799, 1297
Tru1I TTAA 4 cut(s) 749, 1581, 1620, 1679
Tru9I TTAA 4 cut(s) 749, 1581, 1620, 1679
TscAI CASTG 1 cut(s) 786
TseFI GTSAC 5 cut(s) 187, 694, 893, 952, 1324
TseI GCWGC 9 cut(s) 98, 723, 861, 1036, 1115, 1366, 1369, 1390, 1414
Tsp45I GTSAC 5 cut(s) 187, 694, 893, 952, 1324
TspDTI ATGAA 1 cut(s) 17
TspGWI ACGGA 2 cut(s) 237, 805
TspMI CCCGGG 1 cut(s) 1607
TspRI CASTG 1 cut(s) 786
Tth111I GACNNNGTC 3 cut(s) 185, 593, 758
VneI GTGCAC 1 cut(s) 910
VpaK11BI GGWCC 3 cut(s) 736, 808, 937
XceI RCATGY 4 cut(s) 536, 1225, 1344, 1654
XhoI CTCGAG 1 cut(s) 1394
XmaI CCCGGG 1 cut(s) 1607
XmiI GTMKAC 5 cut(s) 267, 567, 588, 978, 1164
XspI CTAG 2 cut(s) 1613, 1713
ZraI GACGTC 3 cut(s) 595, 845, 1162
Zsp2I ATGCAT 1 cut(s) 1192
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.