MD06G1009800.v1.1

Glycosyl transferase family 2

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr06
OG0013319
Physical Location & Seq
Forward (+)
1166275 .. 1168152
1878 bp
Loading structure...
UTR
Exon/CDS
Intron
MD06G1009800.v1.1.491

Sequence Viewer

Length: 1878 bp
ATGACGATCCAAATAAAGCAATTGTTCCAGCTCTCCTCCTCCCCACCACCGCCACCGCCACTACCTTCTTTAAATTCTCGGCCTCCTTCGTTTCTGTCCCTCTTCGTTTGCTTCCAAGAAGCCATGCGCCGCACACTCCCTGCTTTCCTCCTCTTCACCTGCGCTTCCCTGTTCCTCCTCGCCTTCTTCTCCCTCCACCTCTCCCGCACCACCGACTTAATCCACCACTTCCCCATCACCCTCGCCGACGACCGCCACCACTCCATCGCAATCCGCGATCAGCCTCTTCCTACCCCTCACCGCACTCGCCACGACGTCTCCTCCCTCACGAACTCCTCCTCCACCGCCATATCCACCGTCTCCGTTCTCCTCCCCTCCTGGGAGATCCTACTCATTGTCTCTCCAGAGACTCCACTTCCATCCGCCGGAGGCAACACCTATGTTTGTCTCTTCCAGAACAACGACACCTCTGACGCCAGGCTCTCCAAACCGTTGCCGTTTACGAACCGGACGACGCTGGCGTGCCCCATGCCCAACCGAGTGAAGCGTCTCCGCCCGTTTCACCAACCTGTGTTGGCGAAGAGCTCCGACAAAGACACGCTGGCGCCGGGTTCGAATTCTCCGGAGCTGTTGGTCAGGTGGAGCTTCATGGTCTACGAGTCGTTCTCGACCGAAGACGACGTCGTCCTGTTCGCCAAGGGTTTGAACAACCGCCAGGGCGTCAACCGACCTCCCGCCGAGTTCAGGTGCCTGTTTGGCGACATCAACAACAAAAACGCCGTCAGAACCGCCGTTACAAGCTCCGTACAAGAGGTGTTCAGGTGCCACCACCCCAACTTAACGGACGTCAATTTCAACGAGAAGCTCATCAAAATCTCACTGGAAATCGTTGACGGAAATGTCGTAGTCCCGTCCGTTGCCTACTACACGTTCAGGCCACCCATGGAGACTACTACTAGTGCGGGGGCCACAGAGATTGCCACAACTGTGGGGACCACAGAAATTCAGCAAAATAATTTGAACGAGGTCTGCGTATGCACCATGGTGTACAACGTGGCAAAGTTCCTGAAGGAGTGGGTGATTTACCATTCCAAGGTCGGAGTCGATCGCTTCATCCTGTACGACAATGACAGCGACGACGGTCTCGAGAGTGTCGTAAAAGAGCTGAACGACGAGGGGTACAACGTTACGACGCTGTTTTGGGTGTGGCCCAAGACGCAGGAAGCCGGGTTCTCGCACGGCGCCCTGTACGCCCGGCGTACGTGCAAGTGGGTCGCGTACATCGACGTGGACGAATTCGTGTTCGCGCCGAACTTGTGGGCCCAGTCGGACCAACCGTCGAAGCACATGCTGAAATCTTTGCTACCGGAAAACAACCATAACAACACCGTTGTTGGGCAGGTTTCGATCAAGTGCAACGATTTCGGTCCGTCGAACCAGAAATATCACCCGGCAGAAGGCGTTACGCAAGGGTACACGTGCCGGAGGCGGTTCGAGCAGCGGCACAAGTCGATAGTGCGGCTGGACGCGGTGGACGACTCGCTGGTGAACGTGATACATCACTTTAAGTTGAAGAAGGGGTACAGGACGAGGCAATTGAGCATGGAGAAGGGGGTGGTGAACCATTATAAGTACCAGGCGTGGCCAGAATTCCAGACCAAGTTTCGGAGGAGGGTGTCGGCATACGTGGTGGATTGGATGCAGGCGCTGAATCCTCAGTCCAAGGACAGGACCCCCGGATTAGGGTTTCAGCCGGTGGAGCCGAAAGGGTGGGCGGAGAAGTTTTGCGAGGTTAGAGACGAGCGGTTGAAGATGTTGACGCAGAGATGGTTTGGGTCTCACACGCCGGATGGCTACAGAATGGTGTGGCAATCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Glyco_transf_92

Protein Analysis

626

Amino Acids

71.13

Weight (kDa)

8.77

Isoelectric Point (pI)

43.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_92 PF01697 343 - 561 7.5e-36 Glycosyltransferase family 92
Glyco_tranf_2_4 PF13704 351 - 438 4.4e-13 Glycosyl transferase family 2
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013319)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G37420
fragaria_vesca FvH4_5g25330
malus_domestica MD06G1009800.v1.1
prunus_persica Prupe.5G010400_v2.0.a1
pyrus_communis pycom04g11530 pycom06g00810 pycom09g12170
rosa_chinensis RchiOBHm_Chr7g0215561
rosa_laevigata RLG00000002648
rosa_multiflora Rmu_co8335425.1_g000001 Rmu_sc0000898.1_g000091 Rmu_sc0021889.1_g000001
rosa_roxburghii Rroxscaffold_3G00244110
rosa_samantha Rh7AG291000 Rh7BG283100 Rh7CG311000 Rh7DG294600
rosa_wichuraiana Rw7G024840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1629
AarI CACCTGC 1 cut(s) 167
AasI GACNNNNNNGTC 2 cut(s) 683, 899
AatII GACGTC 3 cut(s) 318, 684, 849
Acc36I ACCTGC 2 cut(s) 167, 1390
AccB1I GGYRCC 4 cut(s) 604, 747, 822, 1241
AccBSI CCGCTC 1 cut(s) 1804
AccI GTMKAC 1 cut(s) 654
AccII CGCG 4 cut(s) 276, 1277, 1307, 1529
AccIII TCCGGA 1 cut(s) 622
AclI AACGTT 1 cut(s) 1185
AclWI GGATC 1 cut(s) 379
AcoI YGGCCR 1 cut(s) 1643
AcsI RAATTY 5 cut(s) 73, 616, 1002, 1295, 1649
AcuI CTGAAG 1 cut(s) 1088
AcvI CACGTG 1 cut(s) 1479
AcyI GRCGYC 7 cut(s) 315, 474, 605, 681, 720, 846, 1242
AflIII ACRYGT 2 cut(s) 927, 1476
AgsI TTSAA 5 cut(s) 706, 856, 1021, 1573, 1810
AhdI GACNNNNNGTC 1 cut(s) 1336
AhlI ACTAGT 1 cut(s) 956
AjiI CACGTC 1 cut(s) 1288
AjnI CCWGG 4 cut(s) 377, 476, 714, 1635
AleI CACNNNNGTG 2 cut(s) 986, 1043
AloI GAACNNNNNNTCC 4 cut(s) 323, 355, 1214, 1246
AluBI AGCT 7 cut(s) 31, 585, 628, 645, 801, 865, 1165
AluI AGCT 7 cut(s) 31, 585, 628, 645, 801, 865, 1165
Alw21I GWGCWC 1 cut(s) 587
AlwI GGATC 1 cut(s) 379
AlwNI CAGNNNCTG 1 cut(s) 1708
Ama87I CYCGRG 1 cut(s) 1145
Aor13HI TCCGGA 1 cut(s) 622
AoxI GGCC 6 cut(s) 80, 935, 966, 1208, 1320, 1643
ApaI GGGCCC 1 cut(s) 1324
ApeKI GCWGC 1 cut(s) 1498
ApoI RAATTY 5 cut(s) 73, 616, 1002, 1295, 1649
ArsI GACNNNNNNTTYG 4 cut(s) 666, 698, 765, 797
AspLEI GCGC 6 cut(s) 129, 164, 607, 1244, 1309, 1708
AspS9I GGNCC 8 cut(s) 966, 993, 1209, 1320, 1321, 1330, 1427, 1731
AsuC2I CCSGG 5 cut(s) 609, 1228, 1255, 1451, 1737
AsuHPI GGTGA 8 cut(s) 148, 229, 290, 554, 1090, 1439, 1558, 1630
AsuII TTCGAA 1 cut(s) 614
AvaI CYCGRG 1 cut(s) 1145
AvaII GGWCC 4 cut(s) 993, 1330, 1427, 1731
BaeGI GKGCMC 2 cut(s) 527, 1324
BalI TGGCCA 1 cut(s) 1645
BanI GGYRCC 4 cut(s) 604, 747, 822, 1241
BanII GRGCYC 2 cut(s) 587, 1324
BarI GAAGNNNNNNTAC 2 cut(s) 1565, 1597
BbrPI CACGTG 1 cut(s) 1479
BbsI GAAGAC 1 cut(s) 681
Bbv12I GWGCWC 1 cut(s) 587
BbvI GCAGC 1 cut(s) 1510
BccI CCATC 5 cut(s) 242, 272, 427, 1821, 1844
BceAI ACGGC 4 cut(s) 481, 764, 776, 1255
BcgI CGANNNNNNTGC 6 cut(s) 1255, 1289, 1330, 1364, 1405, 1439
BciT130I CCWGG 4 cut(s) 379, 478, 716, 1637
BcnI CCSGG 5 cut(s) 609, 1228, 1255, 1451, 1737
BcuI ACTAGT 1 cut(s) 956
BfaI CTAG 1 cut(s) 957
BfmI CTRYAG 1 cut(s) 1855
BfoI RGCGCY 3 cut(s) 608, 1245, 1709
BfuAI ACCTGC 2 cut(s) 167, 1390
BglI GCCNNNNNGGC 1 cut(s) 756
BisI GCNGC 4 cut(s) 130, 1499, 1502, 1520
BlsI GCNGC 4 cut(s) 131, 1500, 1503, 1521
Bme1390I CCNGG 9 cut(s) 379, 478, 609, 716, 1228, 1255, 1451, 1637, 1737
Bme18I GGWCC 4 cut(s) 993, 1330, 1427, 1731
BmeRI GACNNNNNGTC 1 cut(s) 1336
BmeT110I CYCGRG 1 cut(s) 1145
BmgBI CACGTC 1 cut(s) 1288
BmgT120I GGNCC 8 cut(s) 966, 993, 1209, 1320, 1321, 1330, 1427, 1731
BmiI GGNNCC 9 cut(s) 606, 749, 824, 967, 994, 1243, 1322, 1733, 1761
BmrFI CCNGG 9 cut(s) 379, 478, 609, 716, 1228, 1255, 1451, 1637, 1737
BmrI ACTGGG 1 cut(s) 1318
BmsI GCATC 1 cut(s) 1689
BmuI ACTGGG 1 cut(s) 1318
BoxI GACNNNNGTC 1 cut(s) 1140
BpiI GAAGAC 1 cut(s) 681
BplI GAGNNNNNCTC 2 cut(s) 650, 682
BpmI CTGGAG 1 cut(s) 387
Bpu14I TTCGAA 1 cut(s) 614
BpuMI CCSGG 5 cut(s) 609, 1228, 1255, 1451, 1737
BsaAI YACGTR 3 cut(s) 1263, 1479, 1687
BsaHI GRCGYC 7 cut(s) 315, 474, 605, 681, 720, 846, 1242
BsaI GGTCTC 2 cut(s) 1148, 1842
BsaJI CCNNGG 8 cut(s) 378, 696, 715, 942, 1041, 1092, 1722, 1735
BsaWI WCCGGW 3 cut(s) 507, 622, 1366
BsaXI ACNNNNNCTCC 6 cut(s) 302, 305, 323, 332, 335, 353
Bse118I RCCGGY 1 cut(s) 1753
Bse1I ACTGG 2 cut(s) 885, 1324
BseAI TCCGGA 1 cut(s) 622
BseBI CCWGG 4 cut(s) 379, 478, 716, 1637
BseDI CCNNGG 8 cut(s) 378, 696, 715, 942, 1041, 1092, 1722, 1735
BseGI GGATG 4 cut(s) 419, 1113, 1704, 1855
BseMII CTCAG 1 cut(s) 1730
BseNI ACTGG 2 cut(s) 885, 1324
BseRI GAGGAG 9 cut(s) 25, 28, 140, 167, 310, 325, 328, 359, 1684
BseSI GKGCMC 2 cut(s) 527, 1324
BseXI GCAGC 1 cut(s) 1510
Bsh1236I CGCG 4 cut(s) 276, 1277, 1307, 1529
Bsh1285I CGRYCG 3 cut(s) 253, 672, 1108
BshFI GGCC 6 cut(s) 82, 937, 968, 1210, 1322, 1645
BshNI GGYRCC 4 cut(s) 604, 747, 822, 1241
BsiEI CGRYCG 3 cut(s) 253, 672, 1108
BsiHKAI GWGCWC 1 cut(s) 587
BsiHKCI CYCGRG 1 cut(s) 1145
BsiWI CGTACG 1 cut(s) 1259
BslFI GGGAC 3 cut(s) 82, 893, 1006
BsmBI CGTCTC 4 cut(s) 322, 364, 554, 1791
BsmFI GGGAC 3 cut(s) 82, 893, 1006
BsnI GGCC 6 cut(s) 82, 937, 968, 1210, 1322, 1645
Bso31I GGTCTC 2 cut(s) 1148, 1842
BsoBI CYCGRG 1 cut(s) 1145
Bsp119I TTCGAA 1 cut(s) 614
Bsp120I GGGCCC 1 cut(s) 1320
Bsp1286I GDGCHC 3 cut(s) 527, 587, 1324
Bsp13I TCCGGA 1 cut(s) 622
Bsp1407I TGTACA 1 cut(s) 1047
Bsp143I GATC 5 cut(s) 6, 277, 384, 1105, 1407
Bsp19I CCATGG 2 cut(s) 942, 1041
BspANI GGCC 6 cut(s) 82, 937, 968, 1210, 1322, 1645
BspCNI CTCAG 1 cut(s) 1729
BspEI TCCGGA 1 cut(s) 622
BspFNI CGCG 4 cut(s) 276, 1277, 1307, 1529
BspHI TCATGA 1 cut(s) 1874
BspLI GGNNCC 9 cut(s) 606, 749, 824, 967, 994, 1243, 1322, 1733, 1761
BspMI ACCTGC 2 cut(s) 167, 1390
BspPI GGATC 1 cut(s) 379
BspQI GCTCTTC 1 cut(s) 575
BspT104I TTCGAA 1 cut(s) 614
BspT107I GGYRCC 4 cut(s) 604, 747, 822, 1241
BspTNI GGTCTC 2 cut(s) 1148, 1842
BsrBI CCGCTC 1 cut(s) 1804
BsrFI RCCGGY 1 cut(s) 1753
BsrGI TGTACA 1 cut(s) 1047
BsrI ACTGG 2 cut(s) 885, 1324
BssAI RCCGGY 1 cut(s) 1753
BssECI CCNNGG 8 cut(s) 378, 696, 715, 942, 1041, 1092, 1722, 1735
BssMI GATC 5 cut(s) 6, 277, 384, 1105, 1407
BssNI GRCGYC 7 cut(s) 315, 474, 605, 681, 720, 846, 1242
BssT1I CCWWGG 5 cut(s) 696, 942, 1041, 1092, 1722
Bst2UI CCWGG 4 cut(s) 379, 478, 716, 1637
Bst4CI ACNGT 6 cut(s) 358, 492, 988, 1142, 1338, 1390
Bst6I CTCTTC 5 cut(s) 107, 158, 291, 455, 575
BstACI GRCGYC 7 cut(s) 315, 474, 605, 681, 720, 846, 1242
BstAUI TGTACA 1 cut(s) 1047
BstBAI YACGTR 3 cut(s) 1263, 1479, 1687
BstBI TTCGAA 1 cut(s) 614
BstC8I GCNNGC 4 cut(s) 519, 523, 603, 1704
BstDEI CTNAG 1 cut(s) 1716
BstDSI CCRYGG 2 cut(s) 942, 1041
BstF5I GGATG 4 cut(s) 419, 1113, 1704, 1855
BstFNI CGCG 4 cut(s) 276, 1277, 1307, 1529
BstH2I RGCGCY 3 cut(s) 608, 1245, 1709
BstHHI GCGC 6 cut(s) 129, 164, 607, 1244, 1309, 1708
BstKTI GATC 5 cut(s) 9, 280, 387, 1108, 1410
BstMBI GATC 5 cut(s) 6, 277, 384, 1105, 1407
BstMCI CGRYCG 3 cut(s) 253, 672, 1108
BstMWI GCNNNNNNNGC 5 cut(s) 756, 1216, 1250, 1495, 1759
BstNI CCWGG 4 cut(s) 379, 478, 716, 1637
BstNSI RCATGY 1 cut(s) 1351
BstPAI GACNNNNGTC 1 cut(s) 1140
BstSCI CCNGG 9 cut(s) 377, 476, 607, 714, 1226, 1253, 1449, 1635, 1735
BstSFI CTRYAG 1 cut(s) 1855
BstSLI GKGCMC 2 cut(s) 527, 1324
BstUI CGCG 4 cut(s) 276, 1277, 1307, 1529
BstV1I GCAGC 1 cut(s) 1510
BstV2I GAAGAC 1 cut(s) 681
BstX2I RGATCY 1 cut(s) 384
BstXI CCANNNNNNTGG 1 cut(s) 988
BstYI RGATCY 1 cut(s) 384
BsuRI GGCC 6 cut(s) 82, 937, 968, 1210, 1322, 1645
BtgI CCRYGG 2 cut(s) 942, 1041
BtgZI GCGATG 1 cut(s) 250
BtrI CACGTC 1 cut(s) 1288
BtsCI GGATG 4 cut(s) 419, 1113, 1704, 1855
BtsIMutI CAGTG 1 cut(s) 878
BveI ACCTGC 2 cut(s) 167, 1390
Cac8I GCNNGC 4 cut(s) 519, 523, 603, 1704
CaiI CAGNNNCTG 1 cut(s) 1708
CciI TCATGA 1 cut(s) 1874
CfoI GCGC 6 cut(s) 129, 164, 607, 1244, 1309, 1708
Cfr10I RCCGGY 1 cut(s) 1753
Cfr13I GGNCC 8 cut(s) 966, 993, 1209, 1320, 1321, 1330, 1427, 1731
CpoI CGGWCCG 1 cut(s) 1427
CseI GACGC 8 cut(s) 482, 523, 536, 709, 1201, 1225, 1535, 1828
CspCI CAANNNNNGTGG 2 cut(s) 958, 993
CspI CGGWCCG 1 cut(s) 1427
CviAII CATG 8 cut(s) 124, 529, 649, 943, 1042, 1348, 1603, 1875
DdeI CTNAG 1 cut(s) 1716
DinI GGCGCC 2 cut(s) 606, 1243
DpnI GATC 5 cut(s) 8, 279, 386, 1107, 1409
DpnII GATC 5 cut(s) 6, 277, 384, 1105, 1407
DraI TTTAAA 1 cut(s) 72
DrdI GACNNNNNNGTC 2 cut(s) 683, 899
DriI GACNNNNNGTC 1 cut(s) 1336
DseDI GACNNNNNNGTC 2 cut(s) 683, 899
EaeI YGGCCR 1 cut(s) 1643
Eam1104I CTCTTC 5 cut(s) 107, 158, 291, 455, 575
Eam1105I GACNNNNNGTC 1 cut(s) 1336
EarI CTCTTC 5 cut(s) 107, 158, 291, 455, 575
EciI GGCGGA 3 cut(s) 412, 542, 1790
Ecl136II GAGCTC 1 cut(s) 585
Eco130I CCWWGG 5 cut(s) 696, 942, 1041, 1092, 1722
Eco24I GRGCYC 2 cut(s) 587, 1324
Eco31I GGTCTC 2 cut(s) 1148, 1842
Eco47I GGWCC 4 cut(s) 993, 1330, 1427, 1731
Eco53kI GAGCTC 1 cut(s) 585
Eco57I CTGAAG 1 cut(s) 1088
Eco72I CACGTG 1 cut(s) 1479
Eco88I CYCGRG 1 cut(s) 1145
EcoICRI GAGCTC 1 cut(s) 585
EcoO109I RGGNCCY 1 cut(s) 1731
EcoRI GAATTC 3 cut(s) 616, 1295, 1649
EcoRII CCWGG 4 cut(s) 377, 476, 714, 1635
EcoT14I CCWWGG 5 cut(s) 696, 942, 1041, 1092, 1722
EcoT38I GRGCYC 2 cut(s) 587, 1324
EgeI GGCGCC 2 cut(s) 606, 1243
EheI GGCGCC 2 cut(s) 606, 1243
ErhI CCWWGG 5 cut(s) 696, 942, 1041, 1092, 1722
Esp3I CGTCTC 4 cut(s) 322, 364, 554, 1791
FaeI CATG 8 cut(s) 127, 532, 652, 946, 1045, 1351, 1606, 1878
FaqI GGGAC 3 cut(s) 82, 893, 1006
FatI CATG 8 cut(s) 123, 528, 648, 942, 1041, 1347, 1602, 1874
FauI CCCGC 3 cut(s) 212, 742, 955
FblI GTMKAC 1 cut(s) 654
Fnu4HI GCNGC 4 cut(s) 130, 1499, 1502, 1520
FokI GGATG 4 cut(s) 406, 1100, 1711, 1862
FriOI GRGCYC 2 cut(s) 587, 1324
Fsp4HI GCNGC 4 cut(s) 130, 1499, 1502, 1520
FspBI CTAG 1 cut(s) 957
GlaI GCGC 6 cut(s) 128, 163, 606, 1243, 1308, 1707
GluI GCNGC 4 cut(s) 130, 1499, 1502, 1520
GsuI CTGGAG 1 cut(s) 387
HaeII RGCGCY 3 cut(s) 608, 1245, 1709
HaeIII GGCC 6 cut(s) 82, 937, 968, 1210, 1322, 1645
HgaI GACGC 8 cut(s) 482, 523, 536, 709, 1201, 1225, 1535, 1828
HhaI GCGC 6 cut(s) 129, 164, 607, 1244, 1309, 1708
Hin1I GRCGYC 7 cut(s) 315, 474, 605, 681, 720, 846, 1242
Hin1II CATG 8 cut(s) 127, 532, 652, 946, 1045, 1351, 1606, 1878
Hin6I GCGC 6 cut(s) 127, 162, 605, 1242, 1307, 1706
HinP1I GCGC 6 cut(s) 127, 162, 605, 1242, 1307, 1706
HincII GTYRAC 3 cut(s) 724, 892, 1818
HindII GTYRAC 3 cut(s) 724, 892, 1818
HinfI GANTC 5 cut(s) 409, 659, 1101, 1538, 1711
HphI GGTGA 8 cut(s) 148, 229, 290, 554, 1090, 1439, 1558, 1630
Hpy188I TCNGA 6 cut(s) 472, 589, 785, 1100, 1330, 1668
HpyAV CCTTC 7 cut(s) 75, 96, 193, 1063, 1451, 1570, 1603
HpyCH4III ACNGT 6 cut(s) 358, 492, 988, 1142, 1338, 1390
HpyCH4V TGCA 4 cut(s) 1038, 1266, 1416, 1702
HpyF10VI GCNNNNNNNGC 5 cut(s) 756, 1216, 1250, 1495, 1759
HpyF3I CTNAG 1 cut(s) 1716
Hsp92I GRCGYC 7 cut(s) 315, 474, 605, 681, 720, 846, 1242
Hsp92II CATG 8 cut(s) 127, 532, 652, 946, 1045, 1351, 1606, 1878
HspAI GCGC 6 cut(s) 127, 162, 605, 1242, 1307, 1706
KasI GGCGCC 2 cut(s) 604, 1241
Kpn2I TCCGGA 1 cut(s) 622
Kzo9I GATC 5 cut(s) 6, 277, 384, 1105, 1407
LguI GCTCTTC 1 cut(s) 575
LmnI GCTCC 5 cut(s) 590, 625, 642, 806, 1759
Lsp1109I GCAGC 1 cut(s) 1510
LweI GCATC 1 cut(s) 1689
MaeI CTAG 1 cut(s) 957
MaeIII GTNAC 3 cut(s) 793, 1186, 1462
MalI GATC 5 cut(s) 8, 279, 386, 1107, 1409
MbiI CCGCTC 1 cut(s) 1804
MboI GATC 5 cut(s) 6, 277, 384, 1105, 1407
MboII GAAGA 9 cut(s) 94, 145, 178, 278, 442, 592, 686, 1585, 1822
MfeI CAATTG 2 cut(s) 20, 1595
MflI RGATCY 1 cut(s) 384
MhlI GDGCHC 3 cut(s) 527, 587, 1324
MlsI TGGCCA 1 cut(s) 1645
MluCI AATT 9 cut(s) 20, 73, 616, 850, 1002, 1015, 1295, 1595, 1649
MluNI TGGCCA 1 cut(s) 1645
Mly113I GGCGCC 2 cut(s) 605, 1242
MlyI GAGTC 4 cut(s) 403, 668, 1110, 1532
MmeI TCCRAC 3 cut(s) 612, 1078, 1308
Mox20I TGGCCA 1 cut(s) 1645
MroI TCCGGA 1 cut(s) 622
MscI TGGCCA 1 cut(s) 1645
MseI TTAA 4 cut(s) 71, 218, 839, 1566
MslI CAYNNNNRTG 3 cut(s) 986, 1043, 1286
Msp20I TGGCCA 1 cut(s) 1645
MspA1I CMGCKG 1 cut(s) 1501
MspR9I CCNGG 9 cut(s) 379, 478, 609, 716, 1228, 1255, 1451, 1637, 1737
MunI CAATTG 2 cut(s) 20, 1595
MvaI CCWGG 4 cut(s) 379, 478, 716, 1637
MvnI CGCG 4 cut(s) 276, 1277, 1307, 1529
MwoI GCNNNNNNNGC 5 cut(s) 756, 1216, 1250, 1495, 1759
NarI GGCGCC 2 cut(s) 605, 1242
NciI CCSGG 5 cut(s) 609, 1228, 1255, 1451, 1737
NcoI CCATGG 2 cut(s) 942, 1041
NdeII GATC 5 cut(s) 6, 277, 384, 1105, 1407
NlaIII CATG 8 cut(s) 127, 532, 652, 946, 1045, 1351, 1606, 1878
NlaIV GGNNCC 9 cut(s) 606, 749, 824, 967, 994, 1243, 1322, 1733, 1761
NmeAIII GCCGAG 2 cut(s) 58, 763
NspI RCATGY 1 cut(s) 1351
NspV TTCGAA 1 cut(s) 614
OliI CACNNNNGTG 2 cut(s) 986, 1043
PaeR7I CTCGAG 1 cut(s) 1145
PagI TCATGA 1 cut(s) 1874
PaqCI CACCTGC 1 cut(s) 167
PciSI GCTCTTC 1 cut(s) 575
PfeI GAWTC 1 cut(s) 1711
Pfl23II CGTACG 1 cut(s) 1259
PflFI GACNNNGTC 2 cut(s) 680, 683
PkrI GCNGC 4 cut(s) 131, 1500, 1503, 1521
Ple19I CGATCG 1 cut(s) 1108
PleI GAGTC 4 cut(s) 403, 667, 1109, 1532
PluTI GGCGCC 2 cut(s) 608, 1245
PmaCI CACGTG 1 cut(s) 1479
PmlI CACGTG 1 cut(s) 1479
PpsI GAGTC 4 cut(s) 403, 667, 1109, 1532
Ppu21I YACGTR 3 cut(s) 1263, 1479, 1687
PpuMI RGGWCCY 1 cut(s) 1731
PshAI GACNNNNGTC 1 cut(s) 1140
PsiI TTATAA 1 cut(s) 1629
Psp124BI GAGCTC 1 cut(s) 587
Psp1406I AACGTT 1 cut(s) 1185
Psp5II RGGWCCY 1 cut(s) 1731
Psp6I CCWGG 4 cut(s) 377, 476, 714, 1635
PspCI CACGTG 1 cut(s) 1479
PspGI CCWGG 4 cut(s) 377, 476, 714, 1635
PspLI CGTACG 1 cut(s) 1259
PspN4I GGNNCC 9 cut(s) 606, 749, 824, 967, 994, 1243, 1322, 1733, 1761
PspOMI GGGCCC 1 cut(s) 1320
PspPI GGNCC 8 cut(s) 966, 993, 1209, 1320, 1321, 1330, 1427, 1731
PspPPI RGGWCCY 1 cut(s) 1731
PsrI GAACNNNNNNTAC 2 cut(s) 778, 810
PstNI CAGNNNCTG 1 cut(s) 1708
PsuI RGATCY 1 cut(s) 384
PsyI GACNNNGTC 2 cut(s) 680, 683
PvuI CGATCG 1 cut(s) 1108
RseI CAYNNNNRTG 3 cut(s) 986, 1043, 1286
Rsr2I CGGWCCG 1 cut(s) 1427
RsrII CGGWCCG 1 cut(s) 1427
SacI GAGCTC 1 cut(s) 587
SapI GCTCTTC 1 cut(s) 575
SaqAI TTAA 4 cut(s) 71, 218, 839, 1566
SatI GCNGC 4 cut(s) 130, 1499, 1502, 1520
Sau3AI GATC 5 cut(s) 6, 277, 384, 1105, 1407
Sau96I GGNCC 8 cut(s) 966, 993, 1209, 1320, 1321, 1330, 1427, 1731
SchI GAGTC 4 cut(s) 403, 668, 1110, 1532
ScrFI CCNGG 9 cut(s) 379, 478, 609, 716, 1228, 1255, 1451, 1637, 1737
SduI GDGCHC 3 cut(s) 527, 587, 1324
SfaNI GCATC 1 cut(s) 1689
SfcI CTRYAG 1 cut(s) 1855
SfoI GGCGCC 2 cut(s) 606, 1243
Sfr274I CTCGAG 1 cut(s) 1145
SfuI TTCGAA 1 cut(s) 614
SinI GGWCC 4 cut(s) 993, 1330, 1427, 1731
SlaI CTCGAG 1 cut(s) 1145
SmiMI CAYNNNNRTG 3 cut(s) 986, 1043, 1286
SmlI CTYRAG 1 cut(s) 1145
SmoI CTYRAG 1 cut(s) 1145
SpeI ACTAGT 1 cut(s) 956
Sse9I AATT 9 cut(s) 20, 73, 616, 850, 1002, 1015, 1295, 1595, 1649
SspDI GGCGCC 2 cut(s) 604, 1241
SspMI CTAG 1 cut(s) 957
SstI GAGCTC 1 cut(s) 587
StyD4I CCNGG 9 cut(s) 377, 476, 607, 714, 1226, 1253, 1449, 1635, 1735
StyI CCWWGG 5 cut(s) 696, 942, 1041, 1092, 1722
TaaI ACNGT 6 cut(s) 358, 492, 988, 1142, 1338, 1390
TaqII GACCGA 2 cut(s) 686, 1415
TasI AATT 9 cut(s) 20, 73, 616, 850, 1002, 1015, 1295, 1595, 1649
TatI WGTACW 1 cut(s) 1047
TauI GCSGC 3 cut(s) 132, 1504, 1522
TfiI GAWTC 1 cut(s) 1711
Tru1I TTAA 4 cut(s) 71, 218, 839, 1566
Tru9I TTAA 4 cut(s) 71, 218, 839, 1566
TscAI CASTG 1 cut(s) 885
TseI GCWGC 1 cut(s) 1498
TspDTI ATGAA 2 cut(s) 637, 1102
TspGWI ACGGA 6 cut(s) 352, 793, 857, 904, 909, 1419
TspRI CASTG 1 cut(s) 885
Tth111I GACNNNGTC 2 cut(s) 680, 683
VpaK11BI GGWCC 4 cut(s) 993, 1330, 1427, 1731
XapI RAATTY 5 cut(s) 73, 616, 1002, 1295, 1649
XceI RCATGY 1 cut(s) 1351
XhoI CTCGAG 1 cut(s) 1145
XmiI GTMKAC 1 cut(s) 654
XspI CTAG 1 cut(s) 957
ZraI GACGTC 3 cut(s) 316, 682, 847
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.