RchiOBHm_Chr7g0215561

Glycosyl transferase family 2

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0013319
Physical Location & Seq
Forward (+)
33271742 .. 33273405
1664 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ19287

Sequence Viewer

Length: 1623 bp
ATGCGCCGCTCTCTCTCCGCTGCGCTTTTGTTCGCCATCGCCGCCCTCTTCCTCTTCGCCTCCTTCTCCCTCCACCTCTCCCGCTCCTCCGTCTCCCGCTCAGACCTCATCCACCGCTACCCCATCCCCAGCCCCGCCGCCGACCACCACCTCCTCCGCGACGACGACCAGTCTCCGCCTCTCAGCCATGTCTCCTCCGTCTCCACCGTCGCAGTGCTTCTACCTGCCTGGAAGGTCCTCATCATTGTTTCGCCGGAGACTTCGCTCTCGGAGAAGGACCGTTACGTCTGCGTGTTCCCGAACAACCGCACCTCTCGTGCCAGATTCGCCGGGATTCTGCCGTCGAGGAACCGAACGGCGTTTTATTGCGCGATGCCGAACAGAGTCAGGCGACTCCGGCCGTTTCTCCAGCCGGTGCTGTCGAGGAAGTCGCAGATCATCAACAACGACTCGACGACGGCGCCGGAGATGATCCGGTGGACTTTCCTTGTCTACGAGTCGTTCTCCACCGAAGACGACGTCGTTCTGTTCGCGAAAGGCCTCAACAATCGCCAAGGCGCGAACCGCCCTCCGAGCGAGTTCCGGTGCGTCTTCGGCGACGCCTCCAAACCCGACGCCGTTAGAACCGCCGTCACGAGCTCAAATCAAGAGGTCTTCCGGTGCCCGCACCCGGACCCGACGGCGTTAAACGACGAAGCCAACGCCAGAATCTCACTGGAAATCGTCGACGGGAATCGGGTGGTCCCCTCCGTGGCCTACTACACCGCCCCAAAACGACGACGCATGAGCAGCAGCAGCAACGCGGGCCCCATGGAGCAGCCTAGTCACCAGCTGTGCGCGTGCACGATGGTGTACAACGTGGCAAAGTTTCTGAGGGAGTGGGTGACATACCACTCCCGGATCGGCGTCGACCGGTTCATTCTGTACGACAACGACAGCGACGACGATTTGGAACACGTGGTGCGGCAGCTCAACCAGGAAGGGTTCAACGTTACGACGTCGTTTTGGATCTGGCCTAAGACTCAAGAAGCTGGCTTCTCCCACACTGCCGTGTACGCCAAGTCGTTGTGCAACTGGATGATGTACATTGACGTCGACGAGTTCGTCTTCGCGCCAAATTCTTGGAGCGAGTCTCCGGCGCCGGGGAGGCACATGCTCAAGTCTCTGATACCTAAGGACCCGAGTATCGGGCAAGTTTCGATCCACTGCAACGAGTTTGGCCCTCGAACCAGAAAACGCACCCATTGGAAGCGGCACAAGTCGATTGTGCTGCTGGAGGCGGTTGAGCACTCGCTGCTCAACGTGATACACCATTTTGATATAAAGAAAGAGTTCAGAACAAAGCAACTGAGCAGTGAGGATGCTATAGTGAACCATTATAAGTACCAAGCTTGGCCCGAGTTTCAGACCAAGTTCCGGAGAAGGGTGTCGGCTTACGTGGTGGATTGGACTGAGGGGCTTAATCCGATGTCCAAGGATAGGACTCCGGGGCTAGGTTTTCAGCCGGTGGAGCCGAAAGGGTGGCCGGAAATGTTTTGTGAGGTTAGGGATGACAGGTTGAAGATGTTGACGCAGAAATGGTTTTGGTCTTCTGCTAGTAGTAAAATGGTGTGGCAAAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Glyco_transf_92

Protein Analysis

540

Amino Acids

61.92

Weight (kDa)

9.28

Isoelectric Point (pI)

55.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_92 PF01697 278 - 478 5.4e-25 Glycosyltransferase family 92
Glyco_tranf_2_4 PF13704 286 - 374 1e-13 Glycosyl transferase family 2
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013319)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G37420
fragaria_vesca FvH4_5g25330
malus_domestica MD06G1009800.v1.1
prunus_persica Prupe.5G010400_v2.0.a1
pyrus_communis pycom04g11530 pycom06g00810 pycom09g12170
rosa_chinensis RchiOBHm_Chr7g0215561
rosa_laevigata RLG00000002648
rosa_multiflora Rmu_co8335425.1_g000001 Rmu_sc0000898.1_g000091 Rmu_sc0021889.1_g000001
rosa_roxburghii Rroxscaffold_3G00244110
rosa_samantha Rh7AG291000 Rh7BG283100 Rh7CG311000 Rh7DG294600
rosa_wichuraiana Rw7G024840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1380
AasI GACNNNNNNGTC 2 cut(s) 284, 1103
AatII GACGTC 3 cut(s) 522, 1001, 1095
Acc36I ACCTGC 1 cut(s) 232
AccB1I GGYRCC 3 cut(s) 460, 660, 1138
AccBSI CCGCTC 3 cut(s) 9, 84, 99
AccI GTMKAC 4 cut(s) 492, 726, 909, 1095
AccII CGCG 7 cut(s) 159, 371, 533, 560, 803, 839, 1112
AccIII TCCGGA 1 cut(s) 1416
AclI AACGTT 1 cut(s) 990
AclWI GGATC 4 cut(s) 466, 908, 1016, 1195
AcoI YGGCCR 2 cut(s) 398, 1523
AcsI RAATTY 1 cut(s) 1117
AcvI CACGTG 1 cut(s) 958
AcyI GRCGYC 8 cut(s) 461, 519, 600, 615, 906, 998, 1092, 1139
AdeI CACNNNGTG 1 cut(s) 961
AfaI GTAC 5 cut(s) 854, 926, 1055, 1085, 1385
AfiI CCNNNNNNNGG 8 cut(s) 670, 751, 1142, 1187, 1416, 1423, 1479, 1493
AflIII ACRYGT 1 cut(s) 955
AgeI ACCGGT 1 cut(s) 912
AgsI TTSAA 2 cut(s) 988, 1561
AhdI GACNNNNNGTC 1 cut(s) 169
AjnI CCWGG 2 cut(s) 227, 975
AleI CACNNNNGTG 2 cut(s) 848, 1049
AluBI AGCT 5 cut(s) 639, 832, 970, 1031, 1391
AluI AGCT 5 cut(s) 639, 832, 970, 1031, 1391
Alw21I GWGCWC 3 cut(s) 641, 845, 1290
Alw26I GTCTC 7 cut(s) 97, 177, 196, 205, 251, 1137, 1167
Alw44I GTGCAC 1 cut(s) 841
AlwI GGATC 4 cut(s) 466, 908, 1016, 1195
Ama87I CYCGRG 2 cut(s) 1180, 1397
Aor13HI TCCGGA 1 cut(s) 1416
AoxI GGCC 8 cut(s) 398, 538, 753, 805, 1013, 1219, 1394, 1523
ApaI GGGCCC 1 cut(s) 809
ApaLI GTGCAC 1 cut(s) 841
ApeKI GCWGC 8 cut(s) 20, 789, 792, 795, 817, 967, 1270, 1294
ApoI RAATTY 1 cut(s) 1117
ArsI GACNNNNNNTTYG 2 cut(s) 504, 536
AsiGI ACCGGT 1 cut(s) 912
Asp700I GAANNNNTTC 1 cut(s) 1331
AspLEI GCGC 8 cut(s) 6, 25, 371, 463, 560, 839, 1114, 1141
AspS9I GGNCC 9 cut(s) 235, 277, 673, 742, 805, 806, 1177, 1220, 1395
AsuC2I CCSGG 5 cut(s) 331, 671, 898, 1143, 1488
AsuHPI GGTGA 2 cut(s) 818, 895
AvaI CYCGRG 2 cut(s) 1180, 1397
AvaII GGWCC 5 cut(s) 235, 277, 673, 742, 1177
AxyI CCTNAGG 1 cut(s) 1173
BaeGI GKGCMC 3 cut(s) 665, 809, 845
BaeI ACNNNNGTAYC 2 cut(s) 1168, 1201
BanI GGYRCC 3 cut(s) 460, 660, 1138
BanII GRGCYC 2 cut(s) 641, 809
BarI GAAGNNNNNNTAC 2 cut(s) 266, 298
BauI CACGAG 2 cut(s) 315, 634
BbrPI CACGTG 1 cut(s) 958
BbsI GAAGAC 5 cut(s) 519, 583, 646, 1099, 1581
Bbv12I GWGCWC 3 cut(s) 641, 845, 1290
BbvI GCAGC 8 cut(s) 7, 801, 804, 807, 829, 979, 1257, 1281
BccI CCATC 3 cut(s) 44, 131, 841
BceAI ACGGC 8 cut(s) 325, 372, 385, 474, 602, 614, 696, 1034
BcgI CGANNNNNNTGC 2 cut(s) 1252, 1286
BciT130I CCWGG 2 cut(s) 229, 977
BcnI CCSGG 5 cut(s) 331, 671, 898, 1143, 1488
BcoDI GTCTC 7 cut(s) 97, 177, 196, 205, 251, 1137, 1167
BfaI CTAG 3 cut(s) 822, 1493, 1596
BfmI CTRYAG 1 cut(s) 1365
BfoI RGCGCY 2 cut(s) 464, 1142
BfuAI ACCTGC 1 cut(s) 232
BglI GCCNNNNNGGC 1 cut(s) 1147
Bme1390I CCNGG 7 cut(s) 229, 331, 671, 898, 977, 1143, 1488
Bme18I GGWCC 5 cut(s) 235, 277, 673, 742, 1177
BmeRI GACNNNNNGTC 1 cut(s) 169
BmeT110I CYCGRG 2 cut(s) 1180, 1397
BmgT120I GGNCC 9 cut(s) 235, 277, 673, 742, 805, 806, 1177, 1220, 1395
BmrFI CCNGG 7 cut(s) 229, 331, 671, 898, 977, 1143, 1488
BmsI GCATC 2 cut(s) 363, 1351
BpiI GAAGAC 5 cut(s) 519, 583, 646, 1099, 1581
BplI GAGNNNNNCTC 4 cut(s) 488, 520, 1117, 1149
BpmI CTGGAG 2 cut(s) 392, 1295
BpuEI CTTGAG 2 cut(s) 1008, 1142
BpuMI CCSGG 5 cut(s) 331, 671, 898, 1143, 1488
BsaAI YACGTR 2 cut(s) 958, 1438
BsaHI GRCGYC 8 cut(s) 461, 519, 600, 615, 906, 998, 1092, 1139
BsaJI CCNNGG 6 cut(s) 553, 750, 810, 1142, 1473, 1487
BsaWI WCCGGW 5 cut(s) 474, 582, 657, 912, 1416
Bsc4I CCNNNNNNNGG 8 cut(s) 670, 751, 1142, 1187, 1416, 1423, 1479, 1493
Bse118I RCCGGY 3 cut(s) 412, 912, 1504
Bse1I ACTGG 3 cut(s) 169, 720, 1079
Bse21I CCTNAGG 1 cut(s) 1173
BseAI TCCGGA 1 cut(s) 1416
BseBI CCWGG 2 cut(s) 229, 977
BseDI CCNNGG 6 cut(s) 553, 750, 810, 1142, 1473, 1487
BseGI GGATG 5 cut(s) 108, 123, 1083, 1366, 1555
BseLI CCNNNNNNNGG 8 cut(s) 670, 751, 1142, 1187, 1416, 1423, 1479, 1493
BseMII CTCAG 5 cut(s) 114, 196, 863, 1340, 1443
BseNI ACTGG 3 cut(s) 169, 720, 1079
BseRI GAGGAG 3 cut(s) 76, 143, 184
BseSI GKGCMC 3 cut(s) 665, 809, 845
BseX3I CGGCCG 1 cut(s) 398
BseXI GCAGC 8 cut(s) 7, 801, 804, 807, 829, 979, 1257, 1281
BseYI CCCAGC 1 cut(s) 128
Bsh1236I CGCG 7 cut(s) 159, 371, 533, 560, 803, 839, 1112
Bsh1285I CGRYCG 2 cut(s) 401, 913
BshFI GGCC 8 cut(s) 400, 540, 755, 807, 1015, 1221, 1396, 1525
BshNI GGYRCC 3 cut(s) 460, 660, 1138
BshTI ACCGGT 1 cut(s) 912
BsiEI CGRYCG 2 cut(s) 401, 913
BsiHKAI GWGCWC 3 cut(s) 641, 845, 1290
BsiHKCI CYCGRG 2 cut(s) 1180, 1397
BslFI GGGAC 1 cut(s) 728
BslI CCNNNNNNNGG 8 cut(s) 670, 751, 1142, 1187, 1416, 1423, 1479, 1493
BsmAI GTCTC 7 cut(s) 97, 177, 196, 205, 251, 1137, 1167
BsmBI CGTCTC 2 cut(s) 97, 205
BsmFI GGGAC 1 cut(s) 728
BsnI GGCC 8 cut(s) 400, 540, 755, 807, 1015, 1221, 1396, 1525
BsoBI CYCGRG 2 cut(s) 1180, 1397
Bsp120I GGGCCC 1 cut(s) 805
Bsp1286I GDGCHC 5 cut(s) 641, 665, 809, 845, 1290
Bsp13I TCCGGA 1 cut(s) 1416
Bsp1407I TGTACA 2 cut(s) 852, 1083
Bsp143I GATC 5 cut(s) 435, 471, 900, 1008, 1200
Bsp19I CCATGG 1 cut(s) 810
Bsp68I TCGCGA 1 cut(s) 533
BspANI GGCC 8 cut(s) 400, 540, 755, 807, 1015, 1221, 1396, 1525
BspCNI CTCAG 5 cut(s) 113, 195, 864, 1341, 1444
BspEI TCCGGA 1 cut(s) 1416
BspFNI CGCG 7 cut(s) 159, 371, 533, 560, 803, 839, 1112
BspMI ACCTGC 1 cut(s) 232
BspPI GGATC 4 cut(s) 466, 908, 1016, 1195
BspT107I GGYRCC 3 cut(s) 460, 660, 1138
BsrBI CCGCTC 3 cut(s) 9, 84, 99
BsrFI RCCGGY 3 cut(s) 412, 912, 1504
BsrGI TGTACA 2 cut(s) 852, 1083
BsrI ACTGG 3 cut(s) 169, 720, 1079
BssAI RCCGGY 3 cut(s) 412, 912, 1504
BssECI CCNNGG 6 cut(s) 553, 750, 810, 1142, 1473, 1487
BssMI GATC 5 cut(s) 435, 471, 900, 1008, 1200
BssNI GRCGYC 8 cut(s) 461, 519, 600, 615, 906, 998, 1092, 1139
BssSI CACGAG 2 cut(s) 315, 634
BssT1I CCWWGG 3 cut(s) 553, 810, 1473
Bst2BI CACGAG 2 cut(s) 315, 634
Bst2UI CCWGG 2 cut(s) 229, 977
Bst4CI ACNGT 2 cut(s) 208, 281
Bst6I CTCTTC 2 cut(s) 53, 59
BstACI GRCGYC 8 cut(s) 461, 519, 600, 615, 906, 998, 1092, 1139
BstAPI GCANNNNNTGC 1 cut(s) 1294
BstAUI TGTACA 2 cut(s) 852, 1083
BstBAI YACGTR 2 cut(s) 958, 1438
BstC8I GCNNGC 4 cut(s) 665, 805, 841, 1033
BstDEI CTNAG 7 cut(s) 100, 182, 872, 1017, 1173, 1349, 1452
BstDSI CCRYGG 2 cut(s) 750, 810
BstF5I GGATG 5 cut(s) 108, 123, 1083, 1366, 1555
BstFNI CGCG 7 cut(s) 159, 371, 533, 560, 803, 839, 1112
BstH2I RGCGCY 2 cut(s) 464, 1142
BstHHI GCGC 8 cut(s) 6, 25, 371, 463, 560, 839, 1114, 1141
BstKTI GATC 5 cut(s) 438, 474, 903, 1011, 1203
BstMAI GTCTC 7 cut(s) 97, 177, 196, 205, 251, 1137, 1167
BstMBI GATC 5 cut(s) 435, 471, 900, 1008, 1200
BstMCI CGRYCG 2 cut(s) 401, 913
BstNI CCWGG 2 cut(s) 229, 977
BstNSI RCATGY 1 cut(s) 1156
BstSCI CCNGG 7 cut(s) 227, 329, 669, 896, 975, 1141, 1486
BstSFI CTRYAG 1 cut(s) 1365
BstSLI GKGCMC 3 cut(s) 665, 809, 845
BstUI CGCG 7 cut(s) 159, 371, 533, 560, 803, 839, 1112
BstV1I GCAGC 8 cut(s) 7, 801, 804, 807, 829, 979, 1257, 1281
BstV2I GAAGAC 5 cut(s) 519, 583, 646, 1099, 1581
BstX2I RGATCY 1 cut(s) 1008
BstXI CCANNNNNNTGG 1 cut(s) 1122
BstYI RGATCY 1 cut(s) 1008
BstZI CGGCCG 1 cut(s) 398
Bsu36I CCTNAGG 1 cut(s) 1173
BsuRI GGCC 8 cut(s) 400, 540, 755, 807, 1015, 1221, 1396, 1525
BtgI CCRYGG 2 cut(s) 750, 810
BtgZI GCGATG 2 cut(s) 22, 386
BtsCI GGATG 5 cut(s) 108, 123, 1083, 1366, 1555
BtsI GCAGTG 4 cut(s) 219, 1044, 1204, 1360
BtsIMutI CAGTG 5 cut(s) 219, 713, 1044, 1204, 1360
BtuMI TCGCGA 1 cut(s) 533
BveI ACCTGC 1 cut(s) 232
Cac8I GCNNGC 4 cut(s) 665, 805, 841, 1033
CfoI GCGC 8 cut(s) 6, 25, 371, 463, 560, 839, 1114, 1141
Cfr10I RCCGGY 3 cut(s) 412, 912, 1504
Cfr13I GGNCC 9 cut(s) 235, 277, 673, 742, 805, 806, 1177, 1220, 1395
CseI GACGC 6 cut(s) 577, 608, 623, 789, 895, 1579
Csp6I GTAC 5 cut(s) 853, 925, 1054, 1084, 1384
CspAI ACCGGT 1 cut(s) 912
CviAII CATG 4 cut(s) 188, 784, 811, 1153
CviQI GTAC 5 cut(s) 853, 925, 1054, 1084, 1384
DdeI CTNAG 7 cut(s) 100, 182, 872, 1017, 1173, 1349, 1452
DinI GGCGCC 2 cut(s) 462, 1140
DpnI GATC 5 cut(s) 437, 473, 902, 1010, 1202
DpnII GATC 5 cut(s) 435, 471, 900, 1008, 1200
DraIII CACNNNGTG 1 cut(s) 961
DrdI GACNNNNNNGTC 2 cut(s) 284, 1103
DriI GACNNNNNGTC 1 cut(s) 169
DseDI GACNNNNNNGTC 2 cut(s) 284, 1103
EaeI YGGCCR 2 cut(s) 398, 1523
EagI CGGCCG 1 cut(s) 398
Eam1104I CTCTTC 2 cut(s) 53, 59
Eam1105I GACNNNNNGTC 1 cut(s) 169
EarI CTCTTC 2 cut(s) 53, 59
EciI GGCGGA 1 cut(s) 165
Ecl136II GAGCTC 1 cut(s) 639
EclXI CGGCCG 1 cut(s) 398
Eco130I CCWWGG 3 cut(s) 553, 810, 1473
Eco147I AGGCCT 1 cut(s) 540
Eco24I GRGCYC 2 cut(s) 641, 809
Eco47I GGWCC 5 cut(s) 235, 277, 673, 742, 1177
Eco52I CGGCCG 1 cut(s) 398
Eco53kI GAGCTC 1 cut(s) 639
Eco72I CACGTG 1 cut(s) 958
Eco81I CCTNAGG 1 cut(s) 1173
Eco88I CYCGRG 2 cut(s) 1180, 1397
EcoICRI GAGCTC 1 cut(s) 639
EcoO109I RGGNCCY 3 cut(s) 235, 806, 1177
EcoRII CCWGG 2 cut(s) 227, 975
EcoT14I CCWWGG 3 cut(s) 553, 810, 1473
EcoT38I GRGCYC 2 cut(s) 641, 809
EgeI GGCGCC 2 cut(s) 462, 1140
EheI GGCGCC 2 cut(s) 462, 1140
ErhI CCWWGG 3 cut(s) 553, 810, 1473
Esp3I CGTCTC 2 cut(s) 97, 205
FaeI CATG 4 cut(s) 191, 787, 814, 1156
FaiI YATR 8 cut(s) 189, 785, 812, 889, 1154, 1322, 1367, 1380
FaqI GGGAC 1 cut(s) 728
FatI CATG 4 cut(s) 187, 783, 810, 1152
FauI CCCGC 5 cut(s) 89, 104, 142, 672, 796
FblI GTMKAC 4 cut(s) 492, 726, 909, 1095
FokI GGATG 5 cut(s) 95, 110, 1090, 1373, 1562
FriOI GRGCYC 2 cut(s) 641, 809
FspBI CTAG 3 cut(s) 822, 1493, 1596
GlaI GCGC 8 cut(s) 5, 24, 370, 462, 559, 838, 1113, 1140
GsaI CCCAGC 1 cut(s) 132
GsuI CTGGAG 2 cut(s) 392, 1295
HaeII RGCGCY 2 cut(s) 464, 1142
HaeIII GGCC 8 cut(s) 400, 540, 755, 807, 1015, 1221, 1396, 1525
HgaI GACGC 6 cut(s) 577, 608, 623, 789, 895, 1579
HhaI GCGC 8 cut(s) 6, 25, 371, 463, 560, 839, 1114, 1141
Hin1I GRCGYC 8 cut(s) 461, 519, 600, 615, 906, 998, 1092, 1139
Hin1II CATG 4 cut(s) 191, 787, 814, 1156
Hin6I GCGC 8 cut(s) 4, 23, 369, 461, 558, 837, 1112, 1139
HinP1I GCGC 8 cut(s) 4, 23, 369, 461, 558, 837, 1112, 1139
HincII GTYRAC 4 cut(s) 727, 910, 1096, 1569
HindII GTYRAC 4 cut(s) 727, 910, 1096, 1569
HindIII AAGCTT 1 cut(s) 1389
HphI GGTGA 2 cut(s) 818, 895
Hpy188I TCNGA 8 cut(s) 103, 271, 573, 873, 1167, 1337, 1407, 1467
Hpy188III TCNNGA 6 cut(s) 298, 532, 634, 647, 1025, 1417
HpyAV CCTTC 5 cut(s) 73, 226, 268, 974, 1416
HpyCH4III ACNGT 2 cut(s) 208, 281
HpyCH4IV ACGT 9 cut(s) 285, 519, 858, 957, 990, 998, 1092, 1302, 1437
HpyCH4V TGCA 3 cut(s) 843, 1071, 1209
HpyF3I CTNAG 7 cut(s) 100, 182, 872, 1017, 1173, 1349, 1452
HpySE526I ACGT 9 cut(s) 285, 519, 858, 957, 990, 998, 1092, 1302, 1437
Hsp92I GRCGYC 8 cut(s) 461, 519, 600, 615, 906, 998, 1092, 1139
Hsp92II CATG 4 cut(s) 191, 787, 814, 1156
HspAI GCGC 8 cut(s) 4, 23, 369, 461, 558, 837, 1112, 1139
KasI GGCGCC 2 cut(s) 460, 1138
Kpn2I TCCGGA 1 cut(s) 1416
Kzo9I GATC 5 cut(s) 435, 471, 900, 1008, 1200
LmnI GCTCC 4 cut(s) 89, 814, 1125, 1510
Lsp1109I GCAGC 8 cut(s) 7, 801, 804, 807, 829, 979, 1257, 1281
LweI GCATC 2 cut(s) 363, 1351
MaeI CTAG 3 cut(s) 822, 1493, 1596
MaeII ACGT 9 cut(s) 285, 519, 858, 957, 990, 998, 1092, 1302, 1437
MaeIII GTNAC 5 cut(s) 281, 631, 824, 883, 991
MalI GATC 5 cut(s) 437, 473, 902, 1010, 1202
MbiI CCGCTC 3 cut(s) 9, 84, 99
MboI GATC 5 cut(s) 435, 471, 900, 1008, 1200
MboII GAAGA 8 cut(s) 40, 46, 524, 583, 646, 1099, 1573, 1581
MflI RGATCY 1 cut(s) 1008
MhlI GDGCHC 5 cut(s) 641, 665, 809, 845, 1290
MluCI AATT 1 cut(s) 1117
Mly113I GGCGCC 2 cut(s) 461, 1139
MlyI GAGTC 7 cut(s) 387, 393, 443, 506, 1015, 1139, 1477
MroI TCCGGA 1 cut(s) 1416
MroXI GAANNNNTTC 1 cut(s) 1331
MseI TTAA 2 cut(s) 686, 1461
MslI CAYNNNNRTG 2 cut(s) 848, 1049
MspA1I CMGCKG 2 cut(s) 20, 832
MspR9I CCNGG 7 cut(s) 229, 331, 671, 898, 977, 1143, 1488
MvaI CCWGG 2 cut(s) 229, 977
MvnI CGCG 7 cut(s) 159, 371, 533, 560, 803, 839, 1112
NarI GGCGCC 2 cut(s) 461, 1139
NciI CCSGG 5 cut(s) 331, 671, 898, 1143, 1488
NcoI CCATGG 1 cut(s) 810
NdeII GATC 5 cut(s) 435, 471, 900, 1008, 1200
NlaIII CATG 4 cut(s) 191, 787, 814, 1156
NmuCI GTSAC 3 cut(s) 631, 824, 883
NruI TCGCGA 1 cut(s) 533
NspI RCATGY 1 cut(s) 1156
OliI CACNNNNGTG 2 cut(s) 848, 1049
PceI AGGCCT 1 cut(s) 540
PcsI WCGNNNNNNNCGW 2 cut(s) 939, 1101
PdmI GAANNNNTTC 1 cut(s) 1331
PfeI GAWTC 4 cut(s) 324, 334, 708, 733
PflFI GACNNNGTC 1 cut(s) 518
PfoI TCCNGGA 1 cut(s) 896
PinAI ACCGGT 1 cut(s) 912
PleI GAGTC 7 cut(s) 387, 392, 443, 505, 1015, 1138, 1477
PluTI GGCGCC 2 cut(s) 464, 1142
PmaCI CACGTG 1 cut(s) 958
PmlI CACGTG 1 cut(s) 958
PpsI GAGTC 7 cut(s) 387, 392, 443, 505, 1015, 1138, 1477
Ppu21I YACGTR 2 cut(s) 958, 1438
PpuMI RGGWCCY 2 cut(s) 235, 1177
PsiI TTATAA 1 cut(s) 1380
Psp124BI GAGCTC 1 cut(s) 641
Psp1406I AACGTT 1 cut(s) 990
Psp5II RGGWCCY 2 cut(s) 235, 1177
Psp6I CCWGG 2 cut(s) 227, 975
PspCI CACGTG 1 cut(s) 958
PspFI CCCAGC 1 cut(s) 128
PspGI CCWGG 2 cut(s) 227, 975
PspOMI GGGCCC 1 cut(s) 805
PspPI GGNCC 9 cut(s) 235, 277, 673, 742, 805, 806, 1177, 1220, 1395
PspPPI RGGWCCY 2 cut(s) 235, 1177
PsuI RGATCY 1 cut(s) 1008
PsyI GACNNNGTC 1 cut(s) 518
PvuII CAGCTG 1 cut(s) 832
RruI TCGCGA 1 cut(s) 533
RsaI GTAC 5 cut(s) 854, 926, 1055, 1085, 1385
RsaNI GTAC 5 cut(s) 853, 925, 1054, 1084, 1384
RseI CAYNNNNRTG 2 cut(s) 848, 1049
SacI GAGCTC 1 cut(s) 641
SalI GTCGAC 3 cut(s) 725, 908, 1094
SaqAI TTAA 2 cut(s) 686, 1461
Sau3AI GATC 5 cut(s) 435, 471, 900, 1008, 1200
Sau96I GGNCC 9 cut(s) 235, 277, 673, 742, 805, 806, 1177, 1220, 1395
SchI GAGTC 7 cut(s) 387, 393, 443, 506, 1015, 1139, 1477
ScrFI CCNGG 7 cut(s) 229, 331, 671, 898, 977, 1143, 1488
SduI GDGCHC 5 cut(s) 641, 665, 809, 845, 1290
SfaNI GCATC 2 cut(s) 363, 1351
SfcI CTRYAG 1 cut(s) 1365
SfoI GGCGCC 2 cut(s) 462, 1140
SgrDI CGTCGACG 2 cut(s) 725, 1094
SinI GGWCC 5 cut(s) 235, 277, 673, 742, 1177
SmiMI CAYNNNNRTG 2 cut(s) 848, 1049
SmlI CTYRAG 2 cut(s) 1023, 1157
SmoI CTYRAG 2 cut(s) 1023, 1157
Sse9I AATT 1 cut(s) 1117
SseBI AGGCCT 1 cut(s) 540
SspDI GGCGCC 2 cut(s) 460, 1138
SspMI CTAG 3 cut(s) 822, 1493, 1596
SstI GAGCTC 1 cut(s) 641
StuI AGGCCT 1 cut(s) 540
StyD4I CCNGG 7 cut(s) 227, 329, 669, 896, 975, 1141, 1486
StyI CCWWGG 3 cut(s) 553, 810, 1473
TaaI ACNGT 2 cut(s) 208, 281
TaiI ACGT 9 cut(s) 288, 522, 861, 960, 993, 1001, 1095, 1305, 1440
TaqI TCGA 9 cut(s) 344, 422, 452, 726, 909, 1095, 1199, 1225, 1262
TasI AATT 1 cut(s) 1117
TatI WGTACW 2 cut(s) 852, 1083
TauI GCSGC 5 cut(s) 9, 44, 140, 967, 1255
TfiI GAWTC 4 cut(s) 324, 334, 708, 733
Tru1I TTAA 2 cut(s) 686, 1461
Tru9I TTAA 2 cut(s) 686, 1461
TscAI CASTG 5 cut(s) 219, 720, 1051, 1211, 1360
TseFI GTSAC 3 cut(s) 631, 824, 883
TseI GCWGC 8 cut(s) 20, 789, 792, 795, 817, 967, 1270, 1294
Tsp45I GTSAC 3 cut(s) 631, 824, 883
TspDTI ATGAA 1 cut(s) 907
TspGWI ACGGA 3 cut(s) 79, 187, 739
TspRI CASTG 5 cut(s) 219, 720, 1051, 1211, 1360
Tth111I GACNNNGTC 1 cut(s) 518
VneI GTGCAC 1 cut(s) 841
VpaK11BI GGWCC 5 cut(s) 235, 277, 673, 742, 1177
XapI RAATTY 1 cut(s) 1117
XceI RCATGY 1 cut(s) 1156
XcmI CCANNNNNNNNNTGG 1 cut(s) 712
XmiI GTMKAC 4 cut(s) 492, 726, 909, 1095
XmnI GAANNNNTTC 1 cut(s) 1331
XspI CTAG 3 cut(s) 822, 1493, 1596
ZraI GACGTC 3 cut(s) 520, 999, 1093
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.