Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0006203

Physical Location & Seq

Genomic Coordinates Forward (+)

18132221 .. 18144361

Gene Structure 12141 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g26690.t6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3534 bp

ATGCCACACTCGGAGAATTACGAATCCGAGCTCGGACGCCTACATGAGTCGATACAGACCCATCCAGACGATCCCTCCCTCCGCTTCGAACTCGGAGCGTTGCTTTGGGAAGAAGATGACAAGGAGAAATCCGCCGAGCAATTCGTGGTTGCGGCGAAGCTAAACCCTGAGATTGAGAAGGGAGGGGCGTTTAGATACTTAGGGCTTTATTACGCAGCTCTACAATCGCAGTCCCATGCCCAGAGAGCTCTAAAGTGCTTGCAGAAAGCCGTGTCGATCAATCCGGATGACTCTGTTGCCGGGGAAGCTTTGTGTGATTTTCTGGACCAGCAGGGGAAAGAGACATTGGAGGTGGCAGTGTGCAGTGAGGCATCACAGAACTCACCCCGGGCTTTTTGGGCTTTTCAGAGGCTGGGGTACTTGCAGCTCCATCAGAATAAATGCTCGGAAGCTGTGCACAGTCTTCAGCATGCCATTCGTGGATATCCTACCTTTCCGATTTTGTGGGAGGCTCTTGGCCTTGCCTACCGGCGACTTGGTAGGTTCACTGCTGCTCTCAAGTCCTATGGAAGAGCTATCGAATTGGAGGGTACAAGAATCTTTGCTTTGATTGAAAGCGGGAACATCTATTTGATGCTTGGTTCCTTTAAAAAAGGAGTTGAGGCATTTCAGCAAGCTTTGGAATTCTCTCCCAAAAGTGTTTCCGCACACTATGGGCTTTCTTCGGGGCTGCTTGGTTTGGCTAAGGAATGTATTAATCTGGGAGCCTTTAGATGGGGAGCTACAGTCTTAGAGGAGGCATCTAAAGTTGCCTGGAAGAGTACTCATTTAGCTGGAAACATGTCATCTATTTGGAAGCTGCATGGTGATATAGTGCTTACTTATGCAAAATGTTATCCCTGGATGGAGGAGGACCATGGTTTGGAATTTGATGTTGAAGCTTTCAATAATTCTATCCTCTCCTGGAAGCACACCTGCTACGTGGCTGCAAAAACTGCCCGGTGCTCTTATCAGCGAGCTTTGCACTTAGCCCCATGGCAAGCTAATGCATACTCCGACATTGCAGTAACTTCAAATTACATAAACTCTTTAGATAACAGTTCTGGACATGACTCAAGTTCTTGGCAGCCATCAGAGAAGATGGCTTTAGGGGCGTTGTTACTTGAGGGTGACAATTCTGAGTTTTGGGTGGGATTAGGATGTTTGTGTAATGACAATGCACTGAAGCAACATGCTTTAATCAGGGGACTGCAATTGAATGTGTCACTAGCTGTTGCGTGGGCAATCTTAGGAAAGTTATACAGAAAACAAGGTGAGAAGCAATTTGCGAGACAAGCATTTGACTGTGCCAGAAGTATAGATCCTTCTCTTGCTTTGCCATGGGCTGGAATGTCGGCTGATTCTCATTCTAGGGAGTCCTCAGCAGATGAAGCTTATGAGAGCTGCTTGCGAGCTGTGCAAATATTGCCTCTTGCTGAATTCCAAATTGGTCTTGCGAAGCTTGCTCTTGCTTCCGGGCATCTTTCATCTTCACAGGTGTTTGGAGCCATCAAGCAGGCCATCCAACGTGCACCTGACTATCCTGAATGCCATAATTTAAATGGGCTAGTCTCTGAGGCACAGTCCAATTATCAGTCTGCTGCTGTCTCTTATAGGCTAGCACGCTGTGCAATCATCAATTCATCAGGCAGTGATACAAAATCTCACATGAAAGATATAACAGTCAATTTGGCCCGGGCACTTTGTAAGGCAGGGAATGCTCTTGATGCTTTGCGGGAATGCGAACTTTTGAAGAAACAAGGGTTACTTGATGCGGAAACCTCCCAAATATATGCTTTCTCCTTATGGCAACTTGGTCAGACTGATCAAGCTTTTAGTGTGGCAAGAAATCTTGCTGAGAGCATCTCTACAATTGAGCAAGCATCTGCAGCTGCTGCTCTTATTCTCTTCTCTAGATTCCTATATAATATATCTGGACTGGATTCAACTATCAATAACATTCTCCAGATGCCAAAGCAACGGTTTCAGAGCACTAAGTTCAGTTTGATGGTATCTGCTATTCATGCTCTGGATCAAAGAAATCGACTTAAGCCCGTTGGTTTAAGCATCCGTAACAATCTGAAAACGCCTGAAGAGATAACGGAAATGTTCTTTTTATTAGCTCTTGGTACACTAGTGAAGCATGGAACAGAATACCATCTTGGATATCAAAAAGGAATTGATCACGTTAGGAAGTCTCTTCACATGTACCCTAACAGTAGTTTGTTAAGGAATCTTCTTGGTTATCTATTGCTGTCAAGTGAAGAATGGAATAATACCCACATGGCAACTAGGTGTTGCAGCATAGGCACTGATCCAATTAATGGCGGTTTTAAAATGTCATATGAAATACTTGGTGCTGGAGCAGTCGCTTGCTATGCTGTAGGCAATAGCAATCCTAAGTTCTCTTACCCAACATGCTCATACCAGTGCCTGAATCAACCTCAAACCATACAAAACCTGCAGAAATGTTTACGCCAAGAACCATGGAACCAGAATGTAAGGTATTTGCTTGTTCTCAATCTGGTGCAGAAGGCACGTGAAGAGAGATTTCCTCGTCATCTTTGTATTATACTCAGGCGGCTGATAATTGTAGCCCTTTCTGATGAACTTTATCAAAAGCCAGGCATTGCTTTTAGATATATGAAATTCCAGCTTCTACTCTGCGCATCAGAGATCTGTTTGCAAGATGGTTATCTGATTGACTGCATCAGCCATGCCAAAGATGCTTCTATGATTACGCTTCCTGATGCCTATCTTTTCTTTGCACACTTGCTTTTATGTCGTGCCTATGCCTCAACAGGTGATGTAGTAAACCTTAATACAGAGTATATAAGATGCTTGGAGCTCAGGACAGAATATAATATTGGTTGGTTATGTCTGAAGTTCATTGAATCTCGTTATGAATTGAAAACTGGTTTGGATACTTTGGAGTTGAGCTTCAAAGAGTGCTCAAATGAGTGGAAGAATTCATCAAATATGTGGATGGCTCTATTCAATCTGGTTCAAGGTCTGATGTCTATATCAAGCCATGATATCTCATCCGCAGAAGGGTTTCTTTCACAAGCTTGTTCTTTAGCTGGTCCTGAGAGCACTCTCCTGCTTTGTCAGGGTGCCACCTGTATGGAGCTTTCACGCCTGGGTTATGATTCTCAATTCTTATCACTTGCTGTAAGGAGTCTCACTAAAGCTCAAGAAGCTTCTCTCATTCCCTTACCGATTGTCTCAGCATTGCTAGCTCAAGCAGAAGGAAGCCTTGGCTCAAAAGAGAAGTGGGAGAAGAACCTTCGTCTTGAGTGGCCAACTTGGCCGCCAGAAATGAGGCCTGCGGAACTGTTCTTCCAGATGCACTTACTTGCAAAACAGTCGAAAGCTAGTACAGACACTTCCAGTATTGAGTTCTGTCAGAGTCCACAGGGATGGGTTCTTCGAGCAATCCATACAAACCCTTCTTGTATGAGATATTGGAAAGCTTTGCAGAAGCTTGTGGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000184 GO:0000288 GO:0000291 GO:0000785 GO:0000956 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0006139 GO:0006401 GO:0006402 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009892 GO:0009987 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0016070 GO:0016071 GO:0016441 GO:0016458 GO:0019222 GO:0019439 GO:0032991 GO:0034427 GO:0034641 GO:0034655 GO:0035327 GO:0040029 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043928 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044422 GO:0044424 GO:0044427 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046700 GO:0048519 GO:0050789 GO:0055087 GO:0060255 GO:0065007 GO:0070478 GO:0071704 GO:0090304 GO:1901360 GO:1901361 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko03018 map03018

Pfam Domains

Protein Families

TPR_16 TPR_2 TPR_8

Protein Analysis

1178

Amino Acids

131.25

Weight (kDa)

6.61

Isoelectric Point (pI)

47.68

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0006203)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G76630 AT1G76630 AT1G76630
fragaria_vesca	FvH4_5g26690 FvH4_5g26690 FvH4_5g26690 FvH4_5g26690 FvH4_5g26690 FvH4_5g26690
malus_domestica	MD06G1000600.v1.1
prunus_persica	Prupe.5G001100_v2.0.a1 Prupe.5G001100_v2.0.a1 Prupe.5G001100_v2.0.a1 Prupe.5G001100_v2.0.a1 Prupe.5G001100_v2.0.a1 Prupe.5G001100_v2.0.a1
pyrus_communis	pycom06g00040
rosa_chinensis	RchiOBHm_Chr7g0217581
rosa_laevigata	RLG00000002459
rosa_multiflora	Rmu_sc0006161.1_g000003
rosa_roxburghii	Rroxscaffold_3G00241850
rosa_rugosa	Rorug07G0170300
rosa_samantha	Rh7AG310100 Rh7BG301200 Rh7CG329200 Rh7DG309700
rosa_wichuraiana	Rw7G026300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	983
Acc16I	TGCGCA	1 cut(s)	2707
Acc36I	ACCTGC	2 cut(s)	983, 2508
AccB1I	GGYRCC	1 cut(s)	3152
AccB7I	CCANNNNNTGG	3 cut(s)	922, 1385, 2363
AccIII	TCCGGA	1 cut(s)	283
AclWI	GGATC	4 cut(s)	65, 1355, 2079, 2348
AcoI	YGGCCR	2 cut(s)	3338, 3347
AcsI	RAATTY	5 cut(s)	683, 926, 1478, 2687, 3007
AcuI	CTGAAG	4 cut(s)	449, 1244, 2151, 2942
AcvI	CACGTG	1 cut(s)	2579
AcyI	GRCGYC	1 cut(s)	37
AdeI	CACNNNGTG	1 cut(s)	1667
AfaI	GTAC	6 cut(s)	419, 592, 823, 2170, 2249, 3418
AfiI	CCNNNNNNNGG	5 cut(s)	774, 922, 1385, 2363, 3090
AflII	CTTAAG	1 cut(s)	2087
AflIII	ACRYGT	2 cut(s)	840, 2244
AhlI	ACTAGT	1 cut(s)	2173
AjnI	CCWGG	5 cut(s)	812, 899, 962, 2662, 3177
AloI	GAACNNNNNNTCC	2 cut(s)	3363, 3395
Alw21I	GWGCWC	9 cut(s)	33, 250, 459, 1007, 1573, 2033, 2889, 2993, 3134
Alw26I	GTCTC	7 cut(s)	335, 1324, 1615, 1651, 2241, 3224, 3268
Alw44I	GTGCAC	2 cut(s)	455, 1569
AlwI	GGATC	4 cut(s)	65, 1355, 2079, 2348
AlwNI	CAGNNNCTG	3 cut(s)	412, 1934, 2473
Ama87I	CYCGRG	2 cut(s)	387, 1734
Aor13HI	TCCGGA	1 cut(s)	283
AoxI	GGCC	6 cut(s)	517, 1557, 1731, 3338, 3347, 3362
ApaLI	GTGCAC	2 cut(s)	455, 1569
ApoI	RAATTY	5 cut(s)	683, 926, 1478, 2687, 3007
AseI	ATTAAT	2 cut(s)	756, 2361
Asp700I	GAANNNNTTC	1 cut(s)	3093
AspLEI	GCGC	1 cut(s)	2708
AspS9I	GGNCC	4 cut(s)	325, 913, 1732, 3122
AsuC2I	CCSGG	7 cut(s)	301, 388, 389, 1000, 1516, 1735, 1736
AsuHPI	GGTGA	5 cut(s)	375, 878, 1181, 1325, 2855
AsuII	TTCGAA	1 cut(s)	87
AsuNHI	GCTAGC	2 cut(s)	1657, 3274
AvaI	CYCGRG	2 cut(s)	387, 1734
AvaII	GGWCC	3 cut(s)	325, 913, 3122
BaeGI	GKGCMC	3 cut(s)	459, 1573, 1741
BaeI	ACNNNNGTAYC	2 cut(s)	2160, 2193
BalI	TGGCCA	1 cut(s)	3340
BanI	GGYRCC	1 cut(s)	3152
BanII	GRGCYC	3 cut(s)	33, 250, 2889
BarI	GAAGNNNNNNTAC	4 cut(s)	1348, 1380, 3409, 3441
BbrPI	CACGTG	1 cut(s)	2579
BbsI	GAAGAC	1 cut(s)	455
Bbv12I	GWGCWC	9 cut(s)	33, 250, 459, 1007, 1573, 2033, 2889, 2993, 3134
BbvCI	CCTCAGC	1 cut(s)	1420
BceAI	ACGGC	1 cut(s)	254
BcgI	CGANNNNNNTGC	4 cut(s)	458, 492, 3387, 3421
BciT130I	CCWGG	5 cut(s)	814, 901, 964, 2664, 3179
BciVI	GTATCC	1 cut(s)	2956
BclI	TGATCA	2 cut(s)	1864, 2221
BcnI	CCSGG	7 cut(s)	301, 388, 389, 1000, 1516, 1735, 1736
BcoDI	GTCTC	7 cut(s)	335, 1324, 1615, 1651, 2241, 3224, 3268
BcuI	ACTAGT	1 cut(s)	2173
BfaI	CTAG	9 cut(s)	1268, 1410, 1607, 1658, 1953, 2174, 2331, 3275, 3414
BfmI	CTRYAG	4 cut(s)	783, 1926, 2421, 2501
BfrI	CTTAAG	1 cut(s)	2087
BfuAI	ACCTGC	2 cut(s)	983, 2508
BfuI	GTATCC	1 cut(s)	2956
BglI	GCCNNNNNGGC	1 cut(s)	3346
BglII	AGATCT	1 cut(s)	2715
BmcAI	AGTACT	1 cut(s)	823
Bme18I	GGWCC	3 cut(s)	325, 913, 3122
BmeT110I	CYCGRG	2 cut(s)	387, 1734
BmgT120I	GGNCC	4 cut(s)	325, 913, 1732, 3122
BmiI	GGNNCC	5 cut(s)	643, 766, 1546, 2531, 3154
BmtI	GCTAGC	2 cut(s)	1661, 3278
BpiI	GAAGAC	1 cut(s)	455
BplI	GAGNNNNNCTC	4 cut(s)	1889, 1921, 2578, 2610
BpmI	CTGGAG	2 cut(s)	1988, 2421
Bpu10I	CCTNAGC	3 cut(s)	744, 1420, 2888
Bpu14I	TTCGAA	1 cut(s)	87
BpuEI	CTTGAG	6 cut(s)	542, 1099, 1184, 3216, 3264, 3353
BpuMI	CCSGG	7 cut(s)	301, 388, 389, 1000, 1516, 1735, 1736
BsaAI	YACGTR	2 cut(s)	982, 2579
BsaBI	GATNNNNATC	2 cut(s)	2733, 2793
BsaHI	GRCGYC	1 cut(s)	37
BsaWI	WCCGGW	1 cut(s)	283
BsaXI	ACNNNNNCTCC	4 cut(s)	59, 89, 771, 801
Bsc4I	CCNNNNNNNGG	5 cut(s)	774, 922, 1385, 2363, 3090
Bse118I	RCCGGY	1 cut(s)	528
Bse1I	ACTGG	4 cut(s)	1983, 2467, 2959, 3429
Bse3DI	GCAATG	3 cut(s)	1059, 2667, 3269
Bse8I	GATNNNNATC	2 cut(s)	2733, 2793
BseAI	TCCGGA	1 cut(s)	283
BseBI	CCWGG	5 cut(s)	814, 901, 964, 2664, 3179
BseGI	GGATG	9 cut(s)	61, 292, 909, 1205, 1560, 2106, 3030, 3080, 3464
BseJI	GATNNNNATC	2 cut(s)	2733, 2793
BseLI	CCNNNNNNNGG	5 cut(s)	774, 922, 1385, 2363, 3090
BseMI	GCAATG	3 cut(s)	1059, 2667, 3269
BseMII	CTCAG	9 cut(s)	159, 1170, 1434, 1605, 1887, 2629, 2902, 3117, 3279
BseNI	ACTGG	4 cut(s)	1983, 2467, 2959, 3429
BseRI	GAGGAG	2 cut(s)	809, 923
BseSI	GKGCMC	3 cut(s)	459, 1573, 1741
BseYI	CCCAGC	1 cut(s)	412
BsgI	GTGCAG	2 cut(s)	382, 2588
BshFI	GGCC	6 cut(s)	519, 1559, 1733, 3340, 3349, 3364
BshNI	GGYRCC	1 cut(s)	3152
BsiHKAI	GWGCWC	9 cut(s)	33, 250, 459, 1007, 1573, 2033, 2889, 2993, 3134
BsiHKCI	CYCGRG	2 cut(s)	387, 1734
BsiSI	CCGG	7 cut(s)	284, 300, 388, 529, 1000, 1515, 1735
BslFI	GGGAC	2 cut(s)	217, 1260
BslI	CCNNNNNNNGG	5 cut(s)	774, 922, 1385, 2363, 3090
BsmAI	GTCTC	7 cut(s)	335, 1324, 1615, 1651, 2241, 3224, 3268
BsmFI	GGGAC	2 cut(s)	217, 1260
BsmI	GAATGC	3 cut(s)	1592, 1762, 1784
BsnI	GGCC	6 cut(s)	519, 1559, 1733, 3340, 3349, 3364
BsoBI	CYCGRG	2 cut(s)	387, 1734
Bsp119I	TTCGAA	1 cut(s)	87
Bsp13I	TCCGGA	1 cut(s)	283
Bsp143I	GATC	8 cut(s)	70, 276, 1360, 1864, 2071, 2221, 2353, 2715
Bsp19I	CCATGG	4 cut(s)	916, 1034, 1379, 2525
BspANI	GGCC	6 cut(s)	519, 1559, 1733, 3340, 3349, 3364
BspCNI	CTCAG	9 cut(s)	160, 1171, 1433, 1606, 1888, 2628, 2901, 3118, 3278
BspEI	TCCGGA	1 cut(s)	283
BspLI	GGNNCC	5 cut(s)	643, 766, 1546, 2531, 3154
BspMAI	CTGCAG	2 cut(s)	1930, 2505
BspMI	ACCTGC	2 cut(s)	983, 2508
BspOI	GCTAGC	2 cut(s)	1661, 3278
BspPI	GGATC	4 cut(s)	65, 1355, 2079, 2348
BspQI	GCTCTTC	1 cut(s)	565
BspT104I	TTCGAA	1 cut(s)	87
BspT107I	GGYRCC	1 cut(s)	3152
BspTI	CTTAAG	1 cut(s)	2087
BsrDI	GCAATG	3 cut(s)	1059, 2667, 3269
BsrFI	RCCGGY	1 cut(s)	528
BsrI	ACTGG	4 cut(s)	1983, 2467, 2959, 3429
BssAI	RCCGGY	1 cut(s)	528
BssMI	GATC	8 cut(s)	70, 276, 1360, 1864, 2071, 2221, 2353, 2715
BssNI	GRCGYC	1 cut(s)	37
BssT1I	CCWWGG	5 cut(s)	916, 1034, 1379, 2525, 3295
Bst2UI	CCWGG	5 cut(s)	814, 901, 964, 2664, 3179
Bst6I	CTCTTC	6 cut(s)	565, 812, 1952, 2127, 2244, 2577
BstACI	GRCGYC	1 cut(s)	37
BstAFI	CTTAAG	1 cut(s)	2087
BstAPI	GCANNNNNTGC	5 cut(s)	995, 1465, 1667, 1757, 1934
BstBAI	YACGTR	2 cut(s)	982, 2579
BstBI	TTCGAA	1 cut(s)	87
BstDSI	CCRYGG	4 cut(s)	916, 1034, 1379, 2525
BstF5I	GGATG	9 cut(s)	61, 292, 909, 1205, 1560, 2106, 3030, 3080, 3464
BstHHI	GCGC	1 cut(s)	2708
BstKTI	GATC	8 cut(s)	73, 279, 1363, 1867, 2074, 2224, 2356, 2718
BstMAI	GTCTC	7 cut(s)	335, 1324, 1615, 1651, 2241, 3224, 3268
BstMBI	GATC	8 cut(s)	70, 276, 1360, 1864, 2071, 2221, 2353, 2715
BstNI	CCWGG	5 cut(s)	814, 901, 964, 2664, 3179
BstNSI	RCATGY	5 cut(s)	473, 844, 1235, 2248, 2460
BstSFI	CTRYAG	4 cut(s)	783, 1926, 2421, 2501
BstSLI	GKGCMC	3 cut(s)	459, 1573, 1741
BstV2I	GAAGAC	1 cut(s)	455
BstX2I	RGATCY	2 cut(s)	1360, 2715
BstXI	CCANNNNNNTGG	2 cut(s)	3163, 3459
BstYI	RGATCY	2 cut(s)	1360, 2715
BsuI	GTATCC	1 cut(s)	2956
BsuRI	GGCC	6 cut(s)	519, 1559, 1733, 3340, 3349, 3364
BtgI	CCRYGG	4 cut(s)	916, 1034, 1379, 2525
BtsCI	GGATG	9 cut(s)	61, 292, 909, 1205, 1560, 2106, 3030, 3080, 3464
BtsI	GCAGTG	4 cut(s)	363, 370, 546, 1696
BtsIMutI	CAGTG	7 cut(s)	363, 370, 546, 1220, 1696, 2349, 2474
BveI	ACCTGC	2 cut(s)	983, 2508
CaiI	CAGNNNCTG	3 cut(s)	412, 1934, 2473
CfoI	GCGC	1 cut(s)	2708
Cfr10I	RCCGGY	1 cut(s)	528
Cfr13I	GGNCC	4 cut(s)	325, 913, 1732, 3122
Cfr9I	CCCGGG	2 cut(s)	387, 1734
CseI	GACGC	1 cut(s)	45
Csp6I	GTAC	6 cut(s)	418, 591, 822, 2169, 2248, 3417
CviQI	GTAC	6 cut(s)	418, 591, 822, 2169, 2248, 3417
DpnI	GATC	8 cut(s)	72, 278, 1362, 1866, 2073, 2223, 2355, 2717
DpnII	GATC	8 cut(s)	70, 276, 1360, 1864, 2071, 2221, 2353, 2715
DraI	TTTAAA	3 cut(s)	649, 1599, 2374
DraIII	CACNNNGTG	1 cut(s)	1667
EaeI	YGGCCR	2 cut(s)	3338, 3347
Eam1104I	CTCTTC	6 cut(s)	565, 812, 1952, 2127, 2244, 2577
EarI	CTCTTC	6 cut(s)	565, 812, 1952, 2127, 2244, 2577
EciI	GGCGGA	1 cut(s)	121
Ecl136II	GAGCTC	3 cut(s)	31, 248, 2887
Eco130I	CCWWGG	5 cut(s)	916, 1034, 1379, 2525, 3295
Eco147I	AGGCCT	1 cut(s)	3364
Eco24I	GRGCYC	3 cut(s)	33, 250, 2889
Eco32I	GATATC	3 cut(s)	485, 2207, 3076
Eco47I	GGWCC	3 cut(s)	325, 913, 3122
Eco53kI	GAGCTC	3 cut(s)	31, 248, 2887
Eco57I	CTGAAG	4 cut(s)	449, 1244, 2151, 2942
Eco72I	CACGTG	1 cut(s)	2579
Eco88I	CYCGRG	2 cut(s)	387, 1734
EcoICRI	GAGCTC	3 cut(s)	31, 248, 2887
EcoRI	GAATTC	3 cut(s)	683, 1478, 3007
EcoRII	CCWGG	5 cut(s)	812, 899, 962, 2662, 3177
EcoRV	GATATC	3 cut(s)	485, 2207, 3076
EcoT14I	CCWWGG	5 cut(s)	916, 1034, 1379, 2525, 3295
EcoT22I	ATGCAT	1 cut(s)	1051
EcoT38I	GRGCYC	3 cut(s)	33, 250, 2889
ErhI	CCWWGG	5 cut(s)	916, 1034, 1379, 2525, 3295
FalI	AAGNNNNNCTT	6 cut(s)	1791, 1823, 3081, 3113, 3279, 3311
FaqI	GGGAC	2 cut(s)	217, 1260
FauI	CCCGC	2 cut(s)	611, 1767
FauNDI	CATATG	1 cut(s)	2383
FbaI	TGATCA	2 cut(s)	1864, 2221
FokI	GGATG	9 cut(s)	48, 299, 916, 1212, 1547, 2093, 3037, 3067, 3471
FriOI	GRGCYC	3 cut(s)	33, 250, 2889
FspBI	CTAG	9 cut(s)	1268, 1410, 1607, 1658, 1953, 2174, 2331, 3275, 3414
FspI	TGCGCA	1 cut(s)	2707
GlaI	GCGC	1 cut(s)	2707
GsaI	CCCAGC	1 cut(s)	416
GsuI	CTGGAG	2 cut(s)	1988, 2421
HaeIII	GGCC	6 cut(s)	519, 1559, 1733, 3340, 3349, 3364
HapII	CCGG	7 cut(s)	284, 300, 388, 529, 1000, 1515, 1735
HgaI	GACGC	1 cut(s)	45
HhaI	GCGC	1 cut(s)	2708
Hin1I	GRCGYC	1 cut(s)	37
Hin6I	GCGC	1 cut(s)	2706
HinP1I	GCGC	1 cut(s)	2706
HpaII	CCGG	7 cut(s)	284, 300, 388, 529, 1000, 1515, 1735
HphI	GGTGA	5 cut(s)	375, 878, 1181, 1325, 2855
Hpy166II	GTNNAC	7 cut(s)	457, 546, 1571, 2171, 2513, 2854, 3452
Hpy8I	GTNNAC	7 cut(s)	457, 546, 1571, 2171, 2513, 2854, 3452
HpyAV	CCTTC	7 cut(s)	172, 1374, 2566, 3083, 3281, 3335, 3498
HpyCH4IV	ACGT	4 cut(s)	981, 1567, 2226, 2578
HpySE526I	ACGT	4 cut(s)	981, 1567, 2226, 2578
Hsp92I	GRCGYC	1 cut(s)	37
HspAI	GCGC	1 cut(s)	2706
Kpn2I	TCCGGA	1 cut(s)	283
Ksp22I	TGATCA	2 cut(s)	1864, 2221
Kzo9I	GATC	8 cut(s)	70, 276, 1360, 1864, 2071, 2221, 2353, 2715
LguI	GCTCTTC	1 cut(s)	565
LmnI	GCTCC	8 cut(s)	95, 432, 764, 779, 1544, 2402, 2884, 3166
MaeI	CTAG	9 cut(s)	1268, 1410, 1607, 1658, 1953, 2174, 2331, 3275, 3414
MaeII	ACGT	4 cut(s)	981, 1567, 2226, 2578
MaeIII	GTNAC	6 cut(s)	1066, 1158, 1169, 1263, 1803, 2111
MalI	GATC	8 cut(s)	72, 278, 1362, 1866, 2073, 2223, 2355, 2717
MboI	GATC	8 cut(s)	70, 276, 1360, 1864, 2071, 2221, 2353, 2715
MfeI	CAATTG	2 cut(s)	1253, 1911
MflI	RGATCY	2 cut(s)	1360, 2715
MlsI	TGGCCA	1 cut(s)	3340
MluNI	TGGCCA	1 cut(s)	3340
MlyI	GAGTC	6 cut(s)	56, 284, 1106, 1424, 3226, 3457
MmeI	TCCRAC	2 cut(s)	1080, 1588
Mox20I	TGGCCA	1 cut(s)	3340
Mph1103I	ATGCAT	1 cut(s)	1051
MroI	TCCGGA	1 cut(s)	283
MroXI	GAANNNNTTC	1 cut(s)	3093
MscI	TGGCCA	1 cut(s)	3340
MslI	CAYNNNNRTG	3 cut(s)	2467, 3161, 3457
Msp20I	TGGCCA	1 cut(s)	3340
MspA1I	CMGCKG	1 cut(s)	1931
MspCI	CTTAAG	1 cut(s)	2087
MspI	CCGG	7 cut(s)	284, 300, 388, 529, 1000, 1515, 1735
MunI	CAATTG	2 cut(s)	1253, 1911
Mva1269I	GAATGC	3 cut(s)	1592, 1762, 1784
MvaI	CCWGG	5 cut(s)	814, 901, 964, 2664, 3179
NciI	CCSGG	7 cut(s)	301, 388, 389, 1000, 1516, 1735, 1736
NcoI	CCATGG	4 cut(s)	916, 1034, 1379, 2525
NdeI	CATATG	1 cut(s)	2383
NdeII	GATC	8 cut(s)	70, 276, 1360, 1864, 2071, 2221, 2353, 2715
NheI	GCTAGC	2 cut(s)	1657, 3274
NlaIV	GGNNCC	5 cut(s)	643, 766, 1546, 2531, 3154
NmeAIII	GCCGAG	1 cut(s)	160
NmuCI	GTSAC	2 cut(s)	1169, 1263
NsbI	TGCGCA	1 cut(s)	2707
NsiI	ATGCAT	1 cut(s)	1051
NspI	RCATGY	5 cut(s)	473, 844, 1235, 2248, 2460
NspV	TTCGAA	1 cut(s)	87
PaeI	GCATGC	1 cut(s)	473
PaqCI	CACCTGC	1 cut(s)	983
PceI	AGGCCT	1 cut(s)	3364
PciI	ACATGT	2 cut(s)	840, 2244
PciSI	GCTCTTC	1 cut(s)	565
PctI	GAATGC	3 cut(s)	1592, 1762, 1784
PdmI	GAANNNNTTC	1 cut(s)	3093
PfeI	GAWTC	9 cut(s)	23, 597, 1400, 1956, 1982, 2272, 2476, 2933, 3188
PflMI	CCANNNNNTGG	3 cut(s)	922, 1385, 2363
PfoI	TCCNGGA	1 cut(s)	962
PleI	GAGTC	6 cut(s)	55, 284, 1106, 1423, 3225, 3456
PmaCI	CACGTG	1 cut(s)	2579
PmlI	CACGTG	1 cut(s)	2579
PpsI	GAGTC	6 cut(s)	55, 284, 1106, 1423, 3225, 3456
Ppu21I	YACGTR	2 cut(s)	982, 2579
PscI	ACATGT	2 cut(s)	840, 2244
PshBI	ATTAAT	2 cut(s)	756, 2361
Psp124BI	GAGCTC	3 cut(s)	33, 250, 2889
Psp6I	CCWGG	5 cut(s)	812, 899, 962, 2662, 3177
PspCI	CACGTG	1 cut(s)	2579
PspFI	CCCAGC	1 cut(s)	412
PspGI	CCWGG	5 cut(s)	812, 899, 962, 2662, 3177
PspN4I	GGNNCC	5 cut(s)	643, 766, 1546, 2531, 3154
PspPI	GGNCC	4 cut(s)	325, 913, 1732, 3122
PstI	CTGCAG	2 cut(s)	1930, 2505
PstNI	CAGNNNCTG	3 cut(s)	412, 1934, 2473
PsuI	RGATCY	2 cut(s)	1360, 2715
PvuII	CAGCTG	1 cut(s)	1931
RsaI	GTAC	6 cut(s)	419, 592, 823, 2170, 2249, 3418
RsaNI	GTAC	6 cut(s)	418, 591, 822, 2169, 2248, 3417
RseI	CAYNNNNRTG	3 cut(s)	2467, 3161, 3457
SacI	GAGCTC	3 cut(s)	33, 250, 2889
SapI	GCTCTTC	1 cut(s)	565
Sau3AI	GATC	8 cut(s)	70, 276, 1360, 1864, 2071, 2221, 2353, 2715
Sau96I	GGNCC	4 cut(s)	325, 913, 1732, 3122
ScaI	AGTACT	1 cut(s)	823
SchI	GAGTC	6 cut(s)	56, 284, 1106, 1424, 3226, 3457
SfcI	CTRYAG	4 cut(s)	783, 1926, 2421, 2501
SfiI	GGCCNNNNNGGCC	1 cut(s)	3346
SfuI	TTCGAA	1 cut(s)	87
SinI	GGWCC	3 cut(s)	325, 913, 3122
SmaI	CCCGGG	2 cut(s)	389, 1736
SmiI	ATTTAAAT	1 cut(s)	1599
SmiMI	CAYNNNNRTG	3 cut(s)	2467, 3161, 3457
SmlI	CTYRAG	7 cut(s)	557, 1114, 1163, 2087, 3231, 3279, 3332
SmoI	CTYRAG	7 cut(s)	557, 1114, 1163, 2087, 3231, 3279, 3332
SpeI	ACTAGT	1 cut(s)	2173
SphI	GCATGC	1 cut(s)	473
SrfI	GCCCGGGC	1 cut(s)	1736
SseBI	AGGCCT	1 cut(s)	3364
SspI	AATATT	2 cut(s)	1464, 2905
SspMI	CTAG	9 cut(s)	1268, 1410, 1607, 1658, 1953, 2174, 2331, 3275, 3414
SstI	GAGCTC	3 cut(s)	33, 250, 2889
StuI	AGGCCT	1 cut(s)	3364
StyI	CCWWGG	5 cut(s)	916, 1034, 1379, 2525, 3295
SwaI	ATTTAAAT	1 cut(s)	1599
TaiI	ACGT	4 cut(s)	984, 1570, 2229, 2581
TaqI	TCGA	7 cut(s)	50, 87, 275, 579, 2083, 3407, 3469
TatI	WGTACW	2 cut(s)	821, 3416
TauI	GCSGC	3 cut(s)	155, 2623, 3352
TfiI	GAWTC	9 cut(s)	23, 597, 1400, 1956, 1982, 2272, 2476, 2933, 3188
TscAI	CASTG	7 cut(s)	363, 370, 553, 1227, 1696, 2356, 2474
TseFI	GTSAC	2 cut(s)	1169, 1263
Tsp45I	GTSAC	2 cut(s)	1169, 1263
TspGWI	ACGGA	2 cut(s)	2099, 2156
TspMI	CCCGGG	2 cut(s)	387, 1734
TspRI	CASTG	7 cut(s)	363, 370, 553, 1227, 1696, 2356, 2474
Van91I	CCANNNNNTGG	3 cut(s)	922, 1385, 2363
Vha464I	CTTAAG	1 cut(s)	2087
VneI	GTGCAC	2 cut(s)	455, 1569
VpaK11BI	GGWCC	3 cut(s)	325, 913, 3122
VspI	ATTAAT	2 cut(s)	756, 2361
XapI	RAATTY	5 cut(s)	683, 926, 1478, 2687, 3007
XbaI	TCTAGA	1 cut(s)	1952
XceI	RCATGY	5 cut(s)	473, 844, 1235, 2248, 2460
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1598
XmaI	CCCGGG	2 cut(s)	387, 1734
XmnI	GAANNNNTTC	1 cut(s)	3093
XspI	CTAG	9 cut(s)	1268, 1410, 1607, 1658, 1953, 2174, 2331, 3275, 3414
ZrmI	AGTACT	1 cut(s)	823
Zsp2I	ATGCAT	1 cut(s)	1051

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.