Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0006203

Physical Location & Seq

Genomic Coordinates Reverse (-)

34061903 .. 34070896

Gene Structure 8994 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00241850.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3225 bp

ATGCGAGCTGCGAAGGCTAGAGGGAGTCCATACAGGACCGGGGTGTTGTTGTGGGAACAAGATGAGAAGGAAAAGGCTGCAGAGCAATTCGTGGTTGCGGCGAAACTAGACCCCGAAATTGACAAGGGAGGGGCGTTTAGATACTTAGGGCTCTATTACGCCGGGCTCGAATCACAGTCCCATGCCCAGAGAGCTCTAAAGTGCTTGCAGAAAGCTGTGTCTCTCAATCCTGATGACTCTGTTTCCGGGGAAGCTCTGTGTGATTGGTTGGACCAGCAAGGGAAAGAGACATTGGAGGTGGCAGCGTGCAGGGAGGCGTCGCAGAAGTCACCCAGGGCTTTTTGGGCTTTTCAGAGGCTTGGCTACTTGCAGCTCCATCAGAATAAGTGCTCTGAAGCCGTGCACAGTCTTCAACATGCCATTCGCGGATATCCTACCTCTCCAGTTCTGTGGGAGGCTCTTGGCCTTGCCTACCAGCGACTTGGCAGGTTCACTGCTGCTCTCAAGTCGTATGGAAGAGCCATCGAATTGGAGGGTACAAGAATCTTTGCTTTGATCGAAAGTGGAAACATCTATCTGATGCTTGGTTCCTATAAAAAGGGAGTTGAGGCATTTCAGCAAGCTTTGGAGTTCTCTCCCAAAAGTGTCTCTGCACACTATGGACTTTCTTCGGGGCTGCTTGGTTTGGCTAAGGAATGTATTAATCTGGGAGCATTTAGATGGGGAGCTACAGTTTTAGAGGAGGCATCTAAAGTTGCCTGGACGAGTACTCATTTAGCTGGAAATATGTCGTCTCTTTGGAAGCTGCATGGTGATATACTGGAGGACCGTGGTTTAGAATTTGATGTTGATGCTTTCAATAATTCCATCCTCTCCTGGAAGCATACCTGCTGTGTGGCTGCAAAAACTGCCAGGTGCTCTTATCAGCGAGCTTTGCACTTAGCCCCATGGCAAGCTAATGCATACTCCGACATTGCAGCAGCCATCGGAGAAGATGGCTTTGGGGCCTTGTTACTTGAGGGTGACAATTCTGAGTTTTGGGTAGGATTAGGATGCTTGTCTAATCACAGTGCACTGAAACAACATGCTCTAATCAGGGGATTGCAATTGAATGTATCACTAGCTGTTGCGTGGGCATTCTTAGGGAAGTTGTACAGAAAACAAGGTGAGAAGCAATTTGCGAGACAAGCATTTGATTGTGCTAGAAGTATAGATCCTTCTCTTGCTTTGCCATGGGCTGGCATGTCGGCTGATTCTCATTCTAGGGAGTCTGCAGCAGATGAAGCTTATGAGAGCTGCTTACGAGCTGTGCAAATATTTCCTCTTGCTGAATTCCAAATTGGTCTTGCAAAGCTTGCTCTTGTTTCAGGGCATCTTTCATCCTCACAGGTCTTTGGAGCCATCAAGCAGGCCATGCAACGTGCACCTCACTATCCTGAATGCCATAATTTAAATGGGCTAGTCTCTGAGGCACAATCCAATTATCAGTCTGCTGCTGTTTCTTATAGACTAGCACGCTGTGCAATCACTAATTTATCAGGCAGTGATACAAAATCTCAAATGAAGGATATAACAGTCAATTTGGCCCGAGCACTTTGTAAGGGGAATGCTCTAGATGCTTTGCAGGAATGTGAGCTTTTGAAGAAAGAAGGGTTACTTGATGCGGAATCCTCGCAAATATATGCTTTCTCCTTATGGCAACTTGGTCAGACTGACCTGGCCCTTACTGTGGCAAGAAATCTTGCTGAGTGTGTCTCTGCAATGGAACAAGCATCTGCAGCTGCCGCTGTTATTCTTTTCTCTAGATTCCTATATTATATATCTGGACTGGATTCAACAATCAATAACATTCTCCAGATGCCAAAGCAACGGTTTCAGAGTTCTAAGTTCAGTTTGATAGTATCTGCTATTCATGCTCTAGATCAAAGAAATCGACTTAAGCCCGTTGGTTCAAGCATCCGTAACAATCTGAAAACGCCTGAAGAGATAACTGAAATGTTCTTTTTATTAGCGCTTGGTACACTAGTGAAGCATGGATCAGAATACCGTCTTGGATATCAAAAAGGAATTGATCACATTAGAAAGTCTCTTCACATGTATCCTAACAGTAGTTTGTTAAGGAATCTTCTTGGTTATCTTTTGCTGTCAAGTGAAGAATGGAAGAATACCCACATGGCAACTAGGTGTTGCAGCATAGGCACTGATCCAATTAAAGGCGGTTTTAAAATGGCATATGAAATACTTGGTGCTGGAGCAGTCGCTTGCTATGCTGTAGGCAATAGCAATCCTAAATGTTTACGTCAAGAACCATGGAACCAGAATGTAAGGTATTTGCTTGTTCTCAATCTGGTGCAGAAGGCACGTGAAGAGAGATTTCCTCGTCATCTTTGTATTATACTCAGGCGGCTGATAATTGTAGCCCTTTCCGATGAACTTTATCATAAGCCAGGCATTGCTTTTAGATATATGAAATTCCAGCTTCTACTTTGCGCTTCGGAGATCTGTTTGCATGATGGTTATCTGATTGACTGCATCAACCATGCCAACGATGCTTCAATGATTAGACTTCCTGGTGCTTATCTTTTCTTTGCACACTTGCTATTATGTCGTGCTTATGCCTCAGAAGGTGATGCAGTAAACCTTAATAGAGAGTATATACGATGCTTGGAGCTCAGGACAGATTATAATATTGGTTGGTTGTGTCTGAAGTTCATTGAATCTCGTTATGAATTGAAAACTGGTTTGGATACTTTGGAGTTGAGCTTCAAAGACCAGGATACCTCTTCCGCAGAAGGGTTTCTTTCACAAGCTTGTTCTTTAGCTGGTGCTGAGAGCACTCTCCTGCTTTGTCATGGTGCCACCTGTATGGAGCTTTCACGCCTGGGCTATGATTCGCAGTTCTTATCACTTGCTGTAAGGAGTCTCACTAAAGCTCAAGAAGCTTCTCTCATTCCCTTACCAATTGTCTCAGCATTGCTAGCTCAAGCAGAAGGAAGCCTTGGTTCAAGAGAGAAGTGGGAGAAGAACCTTCGTCTTGAATGGCGTACTTGGCCACCAGAAATGAGACCTGCAGAACTGTTCTTCCAGATGCACTTACTTGCAAAACAGTCGAAAGCTAGTACAGACACTTCCAGTATTGAGTTCTGTCAGAACCGTCTCCAGTTGTCAATTGCTCATTTGTTGATTGCAGCCTCTTCGGGTTCTGAAACTTTATTCCTTTTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000184 GO:0000288 GO:0000291 GO:0000785 GO:0000956 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0006139 GO:0006401 GO:0006402 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009892 GO:0009987 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0016070 GO:0016071 GO:0016441 GO:0016458 GO:0019222 GO:0019439 GO:0032991 GO:0034427 GO:0034641 GO:0034655 GO:0035327 GO:0040029 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043928 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044422 GO:0044424 GO:0044427 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046700 GO:0048519 GO:0050789 GO:0055087 GO:0060255 GO:0065007 GO:0070478 GO:0071704 GO:0090304 GO:1901360 GO:1901361 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko03018 map03018

Pfam Domains

Protein Families

TPR_16 TPR_2 TPR_8

Protein Analysis

1074

Amino Acids

119.01

Weight (kDa)

7.96

Isoelectric Point (pI)

43.32

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0006203)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G76630 AT1G76630 AT1G76630
fragaria_vesca	FvH4_5g26690 FvH4_5g26690 FvH4_5g26690 FvH4_5g26690 FvH4_5g26690 FvH4_5g26690
malus_domestica	MD06G1000600.v1.1
prunus_persica	Prupe.5G001100_v2.0.a1 Prupe.5G001100_v2.0.a1 Prupe.5G001100_v2.0.a1 Prupe.5G001100_v2.0.a1 Prupe.5G001100_v2.0.a1 Prupe.5G001100_v2.0.a1
pyrus_communis	pycom06g00040
rosa_chinensis	RchiOBHm_Chr7g0217581
rosa_laevigata	RLG00000002459
rosa_multiflora	Rmu_sc0006161.1_g000003
rosa_roxburghii	Rroxscaffold_3G00241850
rosa_rugosa	Rorug07G0170300
rosa_samantha	Rh7AG310100 Rh7BG301200 Rh7CG329200 Rh7DG309700
rosa_wichuraiana	Rw7G026300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2685
Acc36I	ACCTGC	3 cut(s)	477, 896, 3076
AccB1I	GGYRCC	1 cut(s)	2855
AccB7I	CCANNNNNTGG	1 cut(s)	1238
AccII	CGCG	1 cut(s)	426
AciI	CCGC	7 cut(s)	98, 426, 1664, 1785, 2217, 2404, 2787
AclWI	GGATC	3 cut(s)	1208, 2044, 2198
AcoI	YGGCCR	1 cut(s)	3050
AcsI	RAATTY	3 cut(s)	839, 1331, 2471
AcuI	CTGAAG	3 cut(s)	414, 2001, 2726
AcvI	CACGTG	1 cut(s)	2363
AcyI	GRCGYC	1 cut(s)	317
AdeI	CACNNNGTG	1 cut(s)	1520
AfaI	GTAC	6 cut(s)	538, 769, 1154, 2020, 3046, 3121
AfeI	AGCGCT	1 cut(s)	2013
AfiI	CCNNNNNNNGG	4 cut(s)	1238, 1729, 2213, 2793
AflII	CTTAAG	1 cut(s)	1937
AflIII	ACRYGT	1 cut(s)	2094
AhlI	ACTAGT	1 cut(s)	2023
AjnI	CCWGG	9 cut(s)	332, 758, 875, 911, 1716, 2446, 2569, 2772, 2880
AloI	GAACNNNNNNTCC	2 cut(s)	3066, 3098
Alw21I	GWGCWC	9 cut(s)	196, 392, 405, 920, 1075, 1426, 1594, 2673, 2837
Alw44I	GTGCAC	3 cut(s)	401, 1071, 1422
AlwI	GGATC	3 cut(s)	1208, 2044, 2198
Ama87I	CYCGRG	1 cut(s)	1587
Aor51HI	AGCGCT	1 cut(s)	2013
AoxI	GGCC	6 cut(s)	463, 1005, 1410, 1584, 1719, 3050
ApaLI	GTGCAC	3 cut(s)	401, 1071, 1422
ApoI	RAATTY	3 cut(s)	839, 1331, 2471
AseI	ATTAAT	1 cut(s)	702
Asp700I	GAANNNNTTC	1 cut(s)	2796
AspLEI	GCGC	2 cut(s)	2014, 2492
AspS9I	GGNCC	6 cut(s)	36, 271, 826, 1005, 1585, 1720
AsuC2I	CCSGG	3 cut(s)	40, 163, 247
AsuHPI	GGTGA	5 cut(s)	321, 824, 1034, 1178, 2639
AsuNHI	GCTAGC	1 cut(s)	2977
AvaI	CYCGRG	1 cut(s)	1587
AvaII	GGWCC	3 cut(s)	36, 271, 826
BaeGI	GKGCMC	3 cut(s)	405, 1075, 1426
BaeI	ACNNNNGTAYC	2 cut(s)	2010, 2043
BalI	TGGCCA	1 cut(s)	3052
BanI	GGYRCC	1 cut(s)	2855
BanII	GRGCYC	4 cut(s)	153, 168, 196, 2673
BarI	GAAGNNNNNNTAC	4 cut(s)	1201, 1233, 3112, 3144
BbrPI	CACGTG	1 cut(s)	2363
BbsI	GAAGAC	1 cut(s)	401
Bbv12I	GWGCWC	9 cut(s)	196, 392, 405, 920, 1075, 1426, 1594, 2673, 2837
BccI	CCATC	8 cut(s)	384, 530, 714, 875, 989, 992, 1409, 2507
BceAI	ACGGC	1 cut(s)	383
BcgI	CGANNNNNNTGC	4 cut(s)	3090, 3124, 3177, 3211
BciT130I	CCWGG	9 cut(s)	334, 760, 877, 913, 1718, 2448, 2571, 2774, 2882
BciVI	GTATCC	3 cut(s)	2109, 2740, 2770
BclI	TGATCA	1 cut(s)	2071
BcnI	CCSGG	3 cut(s)	40, 163, 247
BcuI	ACTAGT	1 cut(s)	2023
BfmI	CTRYAG	6 cut(s)	78, 729, 1272, 1776, 2271, 3069
BfoI	RGCGCY	1 cut(s)	2015
BfrI	CTTAAG	1 cut(s)	1937
BfuAI	ACCTGC	3 cut(s)	477, 896, 3076
BfuI	GTATCC	3 cut(s)	2109, 2740, 2770
BglII	AGATCT	1 cut(s)	2499
BmcAI	AGTACT	1 cut(s)	769
Bme18I	GGWCC	3 cut(s)	36, 271, 826
BmeT110I	CYCGRG	1 cut(s)	1587
BmgT120I	GGNCC	6 cut(s)	36, 271, 826, 1005, 1585, 1720
BmiI	GGNNCC	5 cut(s)	589, 1006, 1399, 2315, 2857
BmtI	GCTAGC	1 cut(s)	2981
BpiI	GAAGAC	1 cut(s)	401
BplI	GAGNNNNNCTC	4 cut(s)	1739, 1771, 2362, 2394
BpmI	CTGGAG	5 cut(s)	426, 842, 1838, 2271, 3143
Bpu10I	CCTNAGC	2 cut(s)	690, 2672
BpuEI	CTTGAG	4 cut(s)	488, 1037, 2919, 2967
BpuMI	CCSGG	3 cut(s)	40, 163, 247
BsaAI	YACGTR	1 cut(s)	2363
BsaBI	GATNNNNATC	1 cut(s)	2517
BsaHI	GRCGYC	1 cut(s)	317
BsaI	GGTCTC	1 cut(s)	3058
BsaXI	ACNNNNNCTCC	2 cut(s)	717, 747
Bsc4I	CCNNNNNNNGG	4 cut(s)	1238, 1729, 2213, 2793
Bse1I	ACTGG	6 cut(s)	443, 825, 1833, 2743, 3132, 3160
Bse3DI	GCAATG	4 cut(s)	972, 1767, 2451, 2972
Bse8I	GATNNNNATC	1 cut(s)	2517
BseBI	CCWGG	9 cut(s)	334, 760, 877, 913, 1718, 2448, 2571, 2774, 2882
BseGI	GGATG	4 cut(s)	867, 1058, 1379, 1956
BseJI	GATNNNNATC	1 cut(s)	2517
BseLI	CCNNNNNNNGG	4 cut(s)	1238, 1729, 2213, 2793
BseMI	GCAATG	4 cut(s)	972, 1767, 2451, 2972
BseMII	CTCAG	8 cut(s)	1023, 1458, 1737, 2413, 2634, 2686, 2820, 2982
BseNI	ACTGG	6 cut(s)	443, 825, 1833, 2743, 3132, 3160
BseRI	GAGGAG	1 cut(s)	755
BseSI	GKGCMC	3 cut(s)	405, 1075, 1426
BsgI	GTGCAG	3 cut(s)	328, 636, 2372
Bsh1236I	CGCG	1 cut(s)	426
BshFI	GGCC	6 cut(s)	465, 1007, 1412, 1586, 1721, 3052
BshNI	GGYRCC	1 cut(s)	2855
BsiHKAI	GWGCWC	9 cut(s)	196, 392, 405, 920, 1075, 1426, 1594, 2673, 2837
BsiHKCI	CYCGRG	1 cut(s)	1587
BsiSI	CCGG	3 cut(s)	39, 162, 246
BslFI	GGGAC	1 cut(s)	163
BslI	CCNNNNNNNGG	4 cut(s)	1238, 1729, 2213, 2793
BsmBI	CGTCTC	2 cut(s)	798, 3161
BsmFI	GGGAC	1 cut(s)	163
BsmI	GAATGC	3 cut(s)	1136, 1445, 1612
BsnI	GGCC	6 cut(s)	465, 1007, 1412, 1586, 1721, 3052
Bso31I	GGTCTC	1 cut(s)	3058
BsoBI	CYCGRG	1 cut(s)	1587
Bsp1407I	TGTACA	1 cut(s)	1152
Bsp143I	GATC	7 cut(s)	555, 1213, 1921, 2036, 2071, 2203, 2499
Bsp19I	CCATGG	3 cut(s)	947, 1232, 2309
BspACI	CCGC	7 cut(s)	98, 426, 1664, 1785, 2217, 2404, 2787
BspANI	GGCC	6 cut(s)	465, 1007, 1412, 1586, 1721, 3052
BspCNI	CTCAG	8 cut(s)	1024, 1459, 1738, 2412, 2633, 2685, 2821, 2981
BspFNI	CGCG	1 cut(s)	426
BspLI	GGNNCC	5 cut(s)	589, 1006, 1399, 2315, 2857
BspMAI	CTGCAG	4 cut(s)	82, 1276, 1780, 3073
BspMI	ACCTGC	3 cut(s)	477, 896, 3076
BspOI	GCTAGC	1 cut(s)	2981
BspPI	GGATC	3 cut(s)	1208, 2044, 2198
BspQI	GCTCTTC	1 cut(s)	511
BspT107I	GGYRCC	1 cut(s)	2855
BspTI	CTTAAG	1 cut(s)	1937
BspTNI	GGTCTC	1 cut(s)	3058
BsrDI	GCAATG	4 cut(s)	972, 1767, 2451, 2972
BsrGI	TGTACA	1 cut(s)	1152
BsrI	ACTGG	6 cut(s)	443, 825, 1833, 2743, 3132, 3160
BssMI	GATC	7 cut(s)	555, 1213, 1921, 2036, 2071, 2203, 2499
BssNI	GRCGYC	1 cut(s)	317
BssT1I	CCWWGG	4 cut(s)	947, 1232, 2309, 2998
Bst2UI	CCWGG	9 cut(s)	334, 760, 877, 913, 1718, 2448, 2571, 2774, 2882
Bst6I	CTCTTC	6 cut(s)	511, 1977, 2094, 2361, 2788, 3199
BstACI	GRCGYC	1 cut(s)	317
BstAFI	CTTAAG	1 cut(s)	1937
BstAPI	GCANNNNNTGC	4 cut(s)	908, 1355, 1414, 1520
BstAUI	TGTACA	1 cut(s)	1152
BstBAI	YACGTR	1 cut(s)	2363
BstDSI	CCRYGG	4 cut(s)	829, 947, 1232, 2309
BstF5I	GGATG	4 cut(s)	867, 1058, 1379, 1956
BstFNI	CGCG	1 cut(s)	426
BstH2I	RGCGCY	1 cut(s)	2015
BstHHI	GCGC	2 cut(s)	2014, 2492
BstKTI	GATC	7 cut(s)	558, 1216, 1924, 2039, 2074, 2206, 2502
BstMBI	GATC	7 cut(s)	555, 1213, 1921, 2036, 2071, 2203, 2499
BstNI	CCWGG	9 cut(s)	334, 760, 877, 913, 1718, 2448, 2571, 2774, 2882
BstNSI	RCATGY	4 cut(s)	419, 1088, 1246, 2098
BstSFI	CTRYAG	6 cut(s)	78, 729, 1272, 1776, 2271, 3069
BstSLI	GKGCMC	3 cut(s)	405, 1075, 1426
BstUI	CGCG	1 cut(s)	426
BstV2I	GAAGAC	1 cut(s)	401
BstX2I	RGATCY	2 cut(s)	1213, 2499
BstXI	CCANNNNNNTGG	4 cut(s)	450, 482, 529, 2866
BstYI	RGATCY	2 cut(s)	1213, 2499
BsuI	GTATCC	3 cut(s)	2109, 2740, 2770
BsuRI	GGCC	6 cut(s)	465, 1007, 1412, 1586, 1721, 3052
BtgI	CCRYGG	4 cut(s)	829, 947, 1232, 2309
BtsCI	GGATG	4 cut(s)	867, 1058, 1379, 1956
BtsI	GCAGTG	2 cut(s)	492, 1549
BtsIMutI	CAGTG	5 cut(s)	492, 1073, 1075, 1549, 2199
BveI	ACCTGC	3 cut(s)	477, 896, 3076
CfoI	GCGC	2 cut(s)	2014, 2492
Cfr13I	GGNCC	6 cut(s)	36, 271, 826, 1005, 1585, 1720
CseI	GACGC	1 cut(s)	306
Csp6I	GTAC	6 cut(s)	537, 768, 1153, 2019, 3045, 3120
CviQI	GTAC	6 cut(s)	537, 768, 1153, 2019, 3045, 3120
DpnI	GATC	7 cut(s)	557, 1215, 1923, 2038, 2073, 2205, 2501
DpnII	GATC	7 cut(s)	555, 1213, 1921, 2036, 2071, 2203, 2499
DraI	TTTAAA	2 cut(s)	1452, 2224
DraIII	CACNNNGTG	1 cut(s)	1520
EaeI	YGGCCR	1 cut(s)	3050
Eam1104I	CTCTTC	6 cut(s)	511, 1977, 2094, 2361, 2788, 3199
EarI	CTCTTC	6 cut(s)	511, 1977, 2094, 2361, 2788, 3199
Ecl136II	GAGCTC	2 cut(s)	194, 2671
Eco130I	CCWWGG	4 cut(s)	947, 1232, 2309, 2998
Eco24I	GRGCYC	4 cut(s)	153, 168, 196, 2673
Eco31I	GGTCTC	1 cut(s)	3058
Eco32I	GATATC	2 cut(s)	431, 2057
Eco47I	GGWCC	3 cut(s)	36, 271, 826
Eco47III	AGCGCT	1 cut(s)	2013
Eco53kI	GAGCTC	2 cut(s)	194, 2671
Eco57I	CTGAAG	3 cut(s)	414, 2001, 2726
Eco72I	CACGTG	1 cut(s)	2363
Eco88I	CYCGRG	1 cut(s)	1587
EcoICRI	GAGCTC	2 cut(s)	194, 2671
EcoO109I	RGGNCCY	1 cut(s)	1005
EcoRI	GAATTC	1 cut(s)	1331
EcoRII	CCWGG	9 cut(s)	332, 758, 875, 911, 1716, 2446, 2569, 2772, 2880
EcoRV	GATATC	2 cut(s)	431, 2057
EcoT14I	CCWWGG	4 cut(s)	947, 1232, 2309, 2998
EcoT22I	ATGCAT	1 cut(s)	964
EcoT38I	GRGCYC	4 cut(s)	153, 168, 196, 2673
ErhI	CCWWGG	4 cut(s)	947, 1232, 2309, 2998
Esp3I	CGTCTC	2 cut(s)	798, 3161
FalI	AAGNNNNNCTT	6 cut(s)	1641, 1673, 2784, 2816, 2982, 3014
FaqI	GGGAC	1 cut(s)	163
FauNDI	CATATG	1 cut(s)	2233
FbaI	TGATCA	1 cut(s)	2071
FokI	GGATG	4 cut(s)	854, 1065, 1366, 1943
FriOI	GRGCYC	4 cut(s)	153, 168, 196, 2673
GlaI	GCGC	2 cut(s)	2013, 2491
GsuI	CTGGAG	5 cut(s)	426, 842, 1838, 2271, 3143
HaeII	RGCGCY	1 cut(s)	2015
HaeIII	GGCC	6 cut(s)	465, 1007, 1412, 1586, 1721, 3052
HapII	CCGG	3 cut(s)	39, 162, 246
HgaI	GACGC	1 cut(s)	306
HhaI	GCGC	2 cut(s)	2014, 2492
Hin1I	GRCGYC	1 cut(s)	317
Hin6I	GCGC	2 cut(s)	2012, 2490
HinP1I	GCGC	2 cut(s)	2012, 2490
HindIII	AAGCTT	5 cut(s)	621, 1284, 1352, 2808, 2940
HpaII	CCGG	3 cut(s)	39, 162, 246
HphI	GGTGA	5 cut(s)	321, 824, 1034, 1178, 2639
Hpy166II	GTNNAC	7 cut(s)	403, 492, 1073, 1424, 2021, 2297, 2638
Hpy8I	GTNNAC	7 cut(s)	403, 492, 1073, 1424, 2021, 2297, 2638
Hpy99I	CGWCG	1 cut(s)	322
HpyCH4IV	ACGT	3 cut(s)	1420, 2299, 2362
HpySE526I	ACGT	3 cut(s)	1420, 2299, 2362
Hsp92I	GRCGYC	1 cut(s)	317
HspAI	GCGC	2 cut(s)	2012, 2490
Ksp22I	TGATCA	1 cut(s)	2071
Kzo9I	GATC	7 cut(s)	555, 1213, 1921, 2036, 2071, 2203, 2499
LguI	GCTCTTC	1 cut(s)	511
LmnI	GCTCC	7 cut(s)	378, 710, 725, 1397, 2252, 2668, 2869
MaeII	ACGT	3 cut(s)	1420, 2299, 2362
MaeIII	GTNAC	5 cut(s)	327, 1011, 1022, 1653, 1961
MalI	GATC	7 cut(s)	557, 1215, 1923, 2038, 2073, 2205, 2501
MboI	GATC	7 cut(s)	555, 1213, 1921, 2036, 2071, 2203, 2499
MfeI	CAATTG	3 cut(s)	1106, 2961, 3168
MflI	RGATCY	2 cut(s)	1213, 2499
MlsI	TGGCCA	1 cut(s)	3052
MluNI	TGGCCA	1 cut(s)	3052
MlyI	GAGTC	4 cut(s)	34, 230, 1277, 2929
MmeI	TCCRAC	2 cut(s)	249, 993
Mox20I	TGGCCA	1 cut(s)	3052
Mph1103I	ATGCAT	1 cut(s)	964
MroXI	GAANNNNTTC	1 cut(s)	2796
MscI	TGGCCA	1 cut(s)	3052
MseI	TTAA	7 cut(s)	702, 1451, 1938, 2117, 2211, 2223, 2643
MslI	CAYNNNNRTG	2 cut(s)	718, 2864
Msp20I	TGGCCA	1 cut(s)	3052
MspA1I	CMGCKG	2 cut(s)	1781, 1787
MspCI	CTTAAG	1 cut(s)	1937
MspI	CCGG	3 cut(s)	39, 162, 246
MunI	CAATTG	3 cut(s)	1106, 2961, 3168
Mva1269I	GAATGC	3 cut(s)	1136, 1445, 1612
MvaI	CCWGG	9 cut(s)	334, 760, 877, 913, 1718, 2448, 2571, 2774, 2882
MvnI	CGCG	1 cut(s)	426
NciI	CCSGG	3 cut(s)	40, 163, 247
NcoI	CCATGG	3 cut(s)	947, 1232, 2309
NdeI	CATATG	1 cut(s)	2233
NdeII	GATC	7 cut(s)	555, 1213, 1921, 2036, 2071, 2203, 2499
NheI	GCTAGC	1 cut(s)	2977
NlaIV	GGNNCC	5 cut(s)	589, 1006, 1399, 2315, 2857
NmuCI	GTSAC	2 cut(s)	327, 1022
NsiI	ATGCAT	1 cut(s)	964
NspI	RCATGY	4 cut(s)	419, 1088, 1246, 2098
PasI	CCCWGGG	1 cut(s)	333
PciI	ACATGT	1 cut(s)	2094
PciSI	GCTCTTC	1 cut(s)	511
PcsI	WCGNNNNNNNCGW	1 cut(s)	165
PctI	GAATGC	3 cut(s)	1136, 1445, 1612
PdmI	GAANNNNTTC	1 cut(s)	2796
PfeI	GAWTC	9 cut(s)	170, 543, 1253, 1667, 1806, 1832, 2122, 2717, 2891
PflMI	CCANNNNNTGG	1 cut(s)	1238
PfoI	TCCNGGA	1 cut(s)	875
PleI	GAGTC	4 cut(s)	33, 230, 1276, 2928
PmaCI	CACGTG	1 cut(s)	2363
PmlI	CACGTG	1 cut(s)	2363
PpsI	GAGTC	4 cut(s)	33, 230, 1276, 2928
Ppu21I	YACGTR	1 cut(s)	2363
PscI	ACATGT	1 cut(s)	2094
PshBI	ATTAAT	1 cut(s)	702
PsiI	TTATAA	1 cut(s)	2685
Psp124BI	GAGCTC	2 cut(s)	196, 2673
Psp6I	CCWGG	9 cut(s)	332, 758, 875, 911, 1716, 2446, 2569, 2772, 2880
PspCI	CACGTG	1 cut(s)	2363
PspGI	CCWGG	9 cut(s)	332, 758, 875, 911, 1716, 2446, 2569, 2772, 2880
PspN4I	GGNNCC	5 cut(s)	589, 1006, 1399, 2315, 2857
PspPI	GGNCC	6 cut(s)	36, 271, 826, 1005, 1585, 1720
PstI	CTGCAG	4 cut(s)	82, 1276, 1780, 3073
PsuI	RGATCY	2 cut(s)	1213, 2499
PvuII	CAGCTG	1 cut(s)	1781
RsaI	GTAC	6 cut(s)	538, 769, 1154, 2020, 3046, 3121
RsaNI	GTAC	6 cut(s)	537, 768, 1153, 2019, 3045, 3120
RseI	CAYNNNNRTG	2 cut(s)	718, 2864
SacI	GAGCTC	2 cut(s)	196, 2673
SapI	GCTCTTC	1 cut(s)	511
SaqAI	TTAA	7 cut(s)	702, 1451, 1938, 2117, 2211, 2223, 2643
Sau3AI	GATC	7 cut(s)	555, 1213, 1921, 2036, 2071, 2203, 2499
Sau96I	GGNCC	6 cut(s)	36, 271, 826, 1005, 1585, 1720
ScaI	AGTACT	1 cut(s)	769
SchI	GAGTC	4 cut(s)	34, 230, 1277, 2929
SfcI	CTRYAG	6 cut(s)	78, 729, 1272, 1776, 2271, 3069
SinI	GGWCC	3 cut(s)	36, 271, 826
SmiI	ATTTAAAT	1 cut(s)	1452
SmiMI	CAYNNNNRTG	2 cut(s)	718, 2864
SmlI	CTYRAG	5 cut(s)	503, 1016, 1937, 2934, 2982
SmoI	CTYRAG	5 cut(s)	503, 1016, 1937, 2934, 2982
SpeI	ACTAGT	1 cut(s)	2023
SsiI	CCGC	7 cut(s)	98, 426, 1664, 1785, 2217, 2404, 2787
SspI	AATATT	2 cut(s)	1317, 2689
SstI	GAGCTC	2 cut(s)	196, 2673
StyI	CCWWGG	4 cut(s)	947, 1232, 2309, 2998
SwaI	ATTTAAAT	1 cut(s)	1452
TaiI	ACGT	3 cut(s)	1423, 2302, 2365
TaqI	TCGA	5 cut(s)	168, 525, 558, 1933, 3110
TatI	WGTACW	3 cut(s)	767, 1152, 3119
TauI	GCSGC	3 cut(s)	101, 1787, 2407
TfiI	GAWTC	9 cut(s)	170, 543, 1253, 1667, 1806, 1832, 2122, 2717, 2891
Tru1I	TTAA	7 cut(s)	702, 1451, 1938, 2117, 2211, 2223, 2643
Tru9I	TTAA	7 cut(s)	702, 1451, 1938, 2117, 2211, 2223, 2643
TscAI	CASTG	5 cut(s)	499, 1075, 1080, 1549, 2206
TseFI	GTSAC	2 cut(s)	327, 1022
Tsp45I	GTSAC	2 cut(s)	327, 1022
TspDTI	ATGAA	9 cut(s)	1296, 1368, 1577, 1901, 2250, 2445, 2483, 2701, 2742
TspGWI	ACGGA	1 cut(s)	1949
TspRI	CASTG	5 cut(s)	499, 1075, 1080, 1549, 2206
Van91I	CCANNNNNTGG	1 cut(s)	1238
Vha464I	CTTAAG	1 cut(s)	1937
VneI	GTGCAC	3 cut(s)	401, 1071, 1422
VpaK11BI	GGWCC	3 cut(s)	36, 271, 826
VspI	ATTAAT	1 cut(s)	702
XapI	RAATTY	3 cut(s)	839, 1331, 2471
XbaI	TCTAGA	3 cut(s)	1612, 1802, 1918
XceI	RCATGY	4 cut(s)	419, 1088, 1246, 2098
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1451
XmnI	GAANNNNTTC	1 cut(s)	2796
ZrmI	AGTACT	1 cut(s)	769
Zsp2I	ATGCAT	1 cut(s)	964

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.