Rw7G026300

Tetratricopeptide repeat protein

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
Physical Location & Seq
Forward (+)
33379251 .. 33388766
9516 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G026300.1

Sequence Viewer

Length: 3534 bp
ATGAGACACGAGCAAGATAACGAATGCGAGCTGCGACGGCTAGAGGAGTCCATACAGGACCGTCCAGACGATCCCTCCCTCCGCTTCGAACTCGGGGTGCTGTTGTGGGAGCAAGATGAGAAGGAAAAGGCCGCAGAGCAATTCGTGGTTGCGGCGAAACTAAACCCCGAAATTGAGAAGGGAGGGGCGTTTAGATACTTGGGGCTTTATTACGCCGGGCTCGAATCACAGTCCCATGCCCAGAGAGCTCTAAAGTGCTTGCAGAAAGCTGTGTCTCTCAATCCTGATGACTCCGTTTCCGGGGAAGCTCTGTGTGATTTGTTGGACCAGCAAGGGAAAGAGACATTGGAGGTGGCAGCGTGCAGGGAGGCATCGCACAAGTCACCCAGGGCTTTTTGGGCTTTTCAGAGGCTTGGCTACTTGCAGCTCCATCAGAATAAGTGCTCTGAAGCCGTGCACAGTCTTCAACATGCCATCCGCGGATATCCTACCTCTCCAGTTCTGTGGGAGGCTCTTGGCCTTGCCTACCAGCGACTTGGCAGGTTCACTGCTGCTCTCAAGTCGTATGGAAGAGCCATCGAATTGGAGGGTACAAGAATCTTTGCTTTGATCGAAAGCGGAAACATCTATCTGATGCTTGGTTCCTATAAAAAGGGAGTTGAGGCATTTCAGCAAGCTTTGGAGTTCTCTCCCAAAAGTGTCTCTGCACACTATGGACTTTCTTCGGGGCTGCTTGGTTTGGCTAAGGAATGTATTAATCTGGGAGCATTTAGATGGGGAGCTACAGTTTTAGAGGAGGCATCTAAAGTTGCCTGGACGAGTACTCATTTAGCTGGAAATATGTCGTCTCTTTGGAAGCTGCATGGTGATATACTGCTTACTTATGCAAAATGTTATCCCTGGATGGAGGAGGACCGTGGTTTAGAATTTGATGTTGATGCTTTCAATAATTCCATCCTCTCCTGGAAGCATACCTGCTGTGTGGCTGCAAAAACTGCCAGGTGCTCTTATCAGCGAGCTTTGCACTTAGCCCCATGGCAAGCTAATGCATACTCCGACATTGCAGTAACTTCAAATTTCATATGCTCTTTAGATAACAGTTCTGGACATGACTCAAGTTCTTGGCAGCCATCGGAGAAGATGGCTTTGGGGGCCTTGTTACTTGAGGGTGACAATTCTGAGTTTTGGGTAGGATTAGGATGCTTGTCTAATCACAATGCACTGAAACAACATGCTCTAATCAGGGGATTGCAATTGAATGTATCACTAGCTGTTGCGTGGGCATTCTTAGGGAAGTTGTACAGAAAACAAGGTGAGAAGCAATTTGCGAGACAAGCATTTGATTGTGCTAGAAGTATAGATCCTTCTCTTGCTTTGCCATGGGCTGGCATGTCGGCTGATTCTCATTCTAGGGAGTCTGCAGCAGATGAAGCTTATGAGAGCTGCTTACGAGCTGTGCAAATATTTCCTCTTGCTGAATTCCAAATTGGTCTTGCAAAGCTTGCTCTTGTTTCAGGGCATCTTTCATCCTCACAGGTCTTTGGAGCCATCAAGCAGGCCATGCAACGTGCACCTCACTATCCTGAATGCCATAATTTAAATGGGCTAGTCTCTGAGGCACAGTCCAATTATCAGTCTGCTGCTGTTTCTTATAGACTAGCACGCTGTGCAATCACTAATTTATCAGGCAGTGATACAAAATCTCAAATGAAGGATATAACAGTCAATTTGGCCCGAGCACTTTGTAAGGCAGGGAATGCTCTAGATGCTTTGCAGGAATGTGAGCTTTTGAAGAAAGAAGGGTTACTTGATGTGGAATCCTCGCAAATATATGCTTTCTCCTTATGGCAACTTGGTCAGACTGACCTGGCCCTTACTGTGGCAAGAAATCTTGCTGAGTGTGTCTCTGCAATGGAACAAGCATCTGCAGCTGCCGCTGTTATTCTTTTCTCTAGATTCCTATATTATATTTCTGGACTGGATTCAACAATCAATAACATTCTCCAGATGCCAAAGCAACGGTTTCAGAGTTCTAAGTTCAGTTTGATAGTGTCTGCTATTCATGCTCTAGATCAAAGAAATCGACTTAAGCCTGTTGGTTCAAGCATCCGTAACAATCTGAAAACGCCTGAAGAGATAACTGAAATGTTCTTTTTATTAGCGCTTGGTACACTAGTGAAGCATGGATCAGAATACCGTCTTGGATATCAAAAAGGAATTGATCACATTAGAAAGTCTCTTCACATGTATCCTAACAGTAGTTTGTTAAGGAATCTTCTTGGTTATCTTTTGCTGTCAAGTGAAGAATGGAAGAATACCCACATGGCAACTAGGTGTTGCAGCATAGGCACTGATCCAATTAAAGGCGGTTTTAAAATGGCATATGAAATACTTGGTGCTGGAGCAGTCGCTTGCTATGCTGTAGGCAATAGCAATCCTAAGTTCTCTTACCCAACATGCTCATACCAGTGCCTGAATGAACCTCAAACCATACAACATCTGCAGAAATGTTTACGTCAAGAACCATGGAACCAGAATGTAAGGTATTTGCTTGTTCTCAATCTGGTGCAGAAGGCACGTGAAGAGAGATTTCCTCGTCATCTTTGTATTATACTCAGGCGGCTGATAATTGTAGCCCTTTCCGATGAACTTTATCATAAGCCAGGCATTGCTTTTAGATATATGAAATTCCAGCTTCTACTTTGCGCTTCGGAGATCTGTTTGCATGATGGTTATCTGATTGACTGCATCAACCATGCCAACGATGCTTCAATGATTAGACTTCCTGATGCTTATCTTTTCTTTGCACACTTGCTATTATGTCGTGCTTATGCCTCAGAAGGTGATGCAGTAAACCTTAATAGAGAGTATATACGATGCTTGGAGCTCAGGACAGATTATAATATTGGTTGGTTGTGTCTGAAGTTCATTGAATCTCGTTATGAATTGAAAACTGGTTTGGATACTTTGGAGTTGAGCTTCAAAGAGTGCTCAAAGGAAATGATGAATTCATCGAATATGTGGATGGCTCTATTCAATCTGGTTCAAGGTTTGATGTCTATATCCAGCCAGGATACCTCTTCCGCAGAAGGGTTTCTTTCACAAGCTTGTTCTTTAGCTGGTGCTGAGAGCACTCTCCTGCTTTGTCATGGTGCCACCTGTATGGAGCTTTCACGCCTGGGCTATGATTTGCAGTTCTTATCACTTGCTGTAAGGAGTCTCACTAATGCTCAAGAAGCTTCTCTCATTCCCTTACCAATTGTCTCAGCATTGCTAGCTCAAGCAGAAGGAAGCCTTGGTTCAAGAGAGAAGTGGGAGAAGAACCTTCGTCTTGAATGGCGTACTTGGCCACCAGAAATGAGACCTGCAGAACTGTTCTTCCAGATGCACTTAGTTGCAAAACAGTCGAAAGCTAGTACAGACACTTCCAGTATTGAGTTCTGTCAGAGTCCACAGGGATGGGTTCTTCGAGCAATCCATACAAACCCTTCTTGTATGAGATATTGGAAAGCTTTGCAGAAGCTTGTGGAATGA

Protein Analysis

1177

Amino Acids

131.57

Weight (kDa)

6.9

Isoelectric Point (pI)

48.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2901
Acc36I ACCTGC 3 cut(s) 531, 983, 3373
AccB1I GGYRCC 1 cut(s) 3152
AccB7I CCANNNNNTGG 1 cut(s) 1385
AccII CGCG 1 cut(s) 480
AclWI GGATC 4 cut(s) 65, 1355, 2194, 2348
AcoI YGGCCR 1 cut(s) 3347
AcsI RAATTY 5 cut(s) 926, 1075, 1478, 2687, 3007
AcuI CTGAAG 3 cut(s) 468, 2151, 2942
AcvI CACGTG 1 cut(s) 2579
AdeI CACNNNGTG 1 cut(s) 1667
AfaI GTAC 6 cut(s) 592, 823, 1301, 2170, 3343, 3418
AfeI AGCGCT 1 cut(s) 2163
AfiI CCNNNNNNNGG 5 cut(s) 300, 1385, 1879, 2363, 3090
AflII CTTAAG 1 cut(s) 2087
AflIII ACRYGT 1 cut(s) 2244
AhlI ACTAGT 1 cut(s) 2173
AjnI CCWGG 9 cut(s) 386, 812, 899, 962, 998, 1866, 2662, 3069, 3177
AloI GAACNNNNNNTCC 2 cut(s) 3363, 3395
Alw21I GWGCWC 9 cut(s) 250, 446, 459, 1007, 1573, 1741, 2889, 2993, 3134
Alw44I GTGCAC 2 cut(s) 455, 1569
AlwI GGATC 4 cut(s) 65, 1355, 2194, 2348
AlwNI CAGNNNCTG 1 cut(s) 2473
Ama87I CYCGRG 2 cut(s) 92, 1734
Aor51HI AGCGCT 1 cut(s) 2163
AoxI GGCC 7 cut(s) 129, 517, 1152, 1557, 1731, 1869, 3347
ApaLI GTGCAC 2 cut(s) 455, 1569
ApoI RAATTY 5 cut(s) 926, 1075, 1478, 2687, 3007
AseI ATTAAT 1 cut(s) 756
Asp700I GAANNNNTTC 1 cut(s) 3093
AspLEI GCGC 2 cut(s) 2164, 2708
AspS9I GGNCC 6 cut(s) 58, 325, 913, 1152, 1732, 1870
AsuC2I CCSGG 2 cut(s) 217, 301
AsuHPI GGTGA 5 cut(s) 375, 878, 1181, 1325, 2855
AsuII TTCGAA 1 cut(s) 87
AsuNHI GCTAGC 1 cut(s) 3274
AvaI CYCGRG 2 cut(s) 92, 1734
AvaII GGWCC 3 cut(s) 58, 325, 913
BaeGI GKGCMC 2 cut(s) 459, 1573
BaeI ACNNNNGTAYC 2 cut(s) 2160, 2193
BalI TGGCCA 1 cut(s) 3349
BanI GGYRCC 1 cut(s) 3152
BanII GRGCYC 3 cut(s) 222, 250, 2889
BarI GAAGNNNNNNTAC 4 cut(s) 1348, 1380, 3409, 3441
BauI CACGAG 1 cut(s) 8
BbrPI CACGTG 1 cut(s) 2579
BbsI GAAGAC 1 cut(s) 455
Bbv12I GWGCWC 9 cut(s) 250, 446, 459, 1007, 1573, 1741, 2889, 2993, 3134
BceAI ACGGC 2 cut(s) 53, 437
BcgI CGANNNNNNTGC 2 cut(s) 3387, 3421
BciT130I CCWGG 9 cut(s) 388, 814, 901, 964, 1000, 1868, 2664, 3071, 3179
BciVI GTATCC 3 cut(s) 2259, 2956, 3067
BclI TGATCA 1 cut(s) 2221
BcnI CCSGG 2 cut(s) 217, 301
BcuI ACTAGT 1 cut(s) 2173
BfmI CTRYAG 6 cut(s) 783, 1419, 1926, 2421, 2501, 3366
BfoI RGCGCY 1 cut(s) 2165
BfrI CTTAAG 1 cut(s) 2087
BfuAI ACCTGC 3 cut(s) 531, 983, 3373
BfuI GTATCC 3 cut(s) 2259, 2956, 3067
BglII AGATCT 1 cut(s) 2715
BmcAI AGTACT 1 cut(s) 823
Bme18I GGWCC 3 cut(s) 58, 325, 913
BmeT110I CYCGRG 2 cut(s) 92, 1734
BmgT120I GGNCC 6 cut(s) 58, 325, 913, 1152, 1732, 1870
BmiI GGNNCC 5 cut(s) 643, 1153, 1546, 2531, 3154
BmtI GCTAGC 1 cut(s) 3278
BpiI GAAGAC 1 cut(s) 455
BplI GAGNNNNNCTC 4 cut(s) 1889, 1921, 2578, 2610
BpmI CTGGAG 3 cut(s) 480, 1988, 2421
Bpu10I CCTNAGC 2 cut(s) 744, 2888
Bpu14I TTCGAA 1 cut(s) 87
BpuEI CTTGAG 5 cut(s) 542, 1099, 1184, 3216, 3264
BpuMI CCSGG 2 cut(s) 217, 301
BsaAI YACGTR 1 cut(s) 2579
BsaBI GATNNNNATC 2 cut(s) 2733, 2793
BsaI GGTCTC 1 cut(s) 3355
BsaXI ACNNNNNCTCC 4 cut(s) 59, 89, 771, 801
Bsc4I CCNNNNNNNGG 5 cut(s) 300, 1385, 1879, 2363, 3090
Bse1I ACTGG 5 cut(s) 497, 1983, 2467, 2959, 3429
Bse3DI GCAATG 4 cut(s) 1059, 1917, 2667, 3269
Bse8I GATNNNNATC 2 cut(s) 2733, 2793
BseBI CCWGG 9 cut(s) 388, 814, 901, 964, 1000, 1868, 2664, 3071, 3179
BseGI GGATG 8 cut(s) 474, 909, 954, 1205, 1526, 2106, 3030, 3464
BseJI GATNNNNATC 2 cut(s) 2733, 2793
BseLI CCNNNNNNNGG 5 cut(s) 300, 1385, 1879, 2363, 3090
BseMI GCAATG 4 cut(s) 1059, 1917, 2667, 3269
BseMII CTCAG 8 cut(s) 1170, 1605, 1887, 2629, 2850, 2902, 3117, 3279
BseNI ACTGG 5 cut(s) 497, 1983, 2467, 2959, 3429
BseRI GAGGAG 3 cut(s) 59, 809, 923
BseSI GKGCMC 2 cut(s) 459, 1573
BsgI GTGCAG 3 cut(s) 382, 690, 2588
Bsh1236I CGCG 1 cut(s) 480
BshFI GGCC 7 cut(s) 131, 519, 1154, 1559, 1733, 1871, 3349
BshNI GGYRCC 1 cut(s) 3152
BsiHKAI GWGCWC 9 cut(s) 250, 446, 459, 1007, 1573, 1741, 2889, 2993, 3134
BsiHKCI CYCGRG 2 cut(s) 92, 1734
BsiSI CCGG 2 cut(s) 216, 300
BslFI GGGAC 1 cut(s) 217
BslI CCNNNNNNNGG 5 cut(s) 300, 1385, 1879, 2363, 3090
BsmBI CGTCTC 1 cut(s) 852
BsmFI GGGAC 1 cut(s) 217
BsmI GAATGC 4 cut(s) 29, 1283, 1592, 1762
BsnI GGCC 7 cut(s) 131, 519, 1154, 1559, 1733, 1871, 3349
Bso31I GGTCTC 1 cut(s) 3355
BsoBI CYCGRG 2 cut(s) 92, 1734
Bsp119I TTCGAA 1 cut(s) 87
Bsp1407I TGTACA 1 cut(s) 1299
Bsp143I GATC 8 cut(s) 70, 609, 1360, 2071, 2186, 2221, 2353, 2715
Bsp19I CCATGG 3 cut(s) 1034, 1379, 2525
BspANI GGCC 7 cut(s) 131, 519, 1154, 1559, 1733, 1871, 3349
BspCNI CTCAG 8 cut(s) 1171, 1606, 1888, 2628, 2849, 2901, 3118, 3278
BspFNI CGCG 1 cut(s) 480
BspLI GGNNCC 5 cut(s) 643, 1153, 1546, 2531, 3154
BspMAI CTGCAG 4 cut(s) 1423, 1930, 2505, 3370
BspMI ACCTGC 3 cut(s) 531, 983, 3373
BspOI GCTAGC 1 cut(s) 3278
BspPI GGATC 4 cut(s) 65, 1355, 2194, 2348
BspQI GCTCTTC 1 cut(s) 565
BspT104I TTCGAA 1 cut(s) 87
BspT107I GGYRCC 1 cut(s) 3152
BspTI CTTAAG 1 cut(s) 2087
BspTNI GGTCTC 1 cut(s) 3355
BsrDI GCAATG 4 cut(s) 1059, 1917, 2667, 3269
BsrGI TGTACA 1 cut(s) 1299
BsrI ACTGG 5 cut(s) 497, 1983, 2467, 2959, 3429
BssMI GATC 8 cut(s) 70, 609, 1360, 2071, 2186, 2221, 2353, 2715
BssSI CACGAG 1 cut(s) 8
BssT1I CCWWGG 4 cut(s) 1034, 1379, 2525, 3295
Bst2BI CACGAG 1 cut(s) 8
Bst2UI CCWGG 9 cut(s) 388, 814, 901, 964, 1000, 1868, 2664, 3071, 3179
Bst6I CTCTTC 5 cut(s) 565, 2127, 2244, 2577, 3085
BstAFI CTTAAG 1 cut(s) 2087
BstAPI GCANNNNNTGC 5 cut(s) 995, 1502, 1561, 1667, 1757
BstAUI TGTACA 1 cut(s) 1299
BstBAI YACGTR 1 cut(s) 2579
BstBI TTCGAA 1 cut(s) 87
BstDSI CCRYGG 5 cut(s) 478, 916, 1034, 1379, 2525
BstF5I GGATG 8 cut(s) 474, 909, 954, 1205, 1526, 2106, 3030, 3464
BstFNI CGCG 1 cut(s) 480
BstH2I RGCGCY 1 cut(s) 2165
BstHHI GCGC 2 cut(s) 2164, 2708
BstKTI GATC 8 cut(s) 73, 612, 1363, 2074, 2189, 2224, 2356, 2718
BstMBI GATC 8 cut(s) 70, 609, 1360, 2071, 2186, 2221, 2353, 2715
BstNI CCWGG 9 cut(s) 388, 814, 901, 964, 1000, 1868, 2664, 3071, 3179
BstNSI RCATGY 5 cut(s) 473, 1235, 1393, 2248, 2460
BstSFI CTRYAG 6 cut(s) 783, 1419, 1926, 2421, 2501, 3366
BstSLI GKGCMC 2 cut(s) 459, 1573
BstUI CGCG 1 cut(s) 480
BstV2I GAAGAC 1 cut(s) 455
BstX2I RGATCY 2 cut(s) 1360, 2715
BstXI CCANNNNNNTGG 5 cut(s) 504, 536, 583, 3163, 3459
BstYI RGATCY 2 cut(s) 1360, 2715
BsuI GTATCC 3 cut(s) 2259, 2956, 3067
BsuRI GGCC 7 cut(s) 131, 519, 1154, 1559, 1733, 1871, 3349
BtgI CCRYGG 5 cut(s) 478, 916, 1034, 1379, 2525
BtgZI GCGATG 1 cut(s) 357
BtsCI GGATG 8 cut(s) 474, 909, 954, 1205, 1526, 2106, 3030, 3464
BtsI GCAGTG 2 cut(s) 546, 1696
BtsIMutI CAGTG 5 cut(s) 546, 1220, 1696, 2349, 2474
BveI ACCTGC 3 cut(s) 531, 983, 3373
CaiI CAGNNNCTG 1 cut(s) 2473
CfoI GCGC 2 cut(s) 2164, 2708
Cfr13I GGNCC 6 cut(s) 58, 325, 913, 1152, 1732, 1870
Cfr42I CCGCGG 1 cut(s) 481
Csp6I GTAC 6 cut(s) 591, 822, 1300, 2169, 3342, 3417
CviQI GTAC 6 cut(s) 591, 822, 1300, 2169, 3342, 3417
DpnI GATC 8 cut(s) 72, 611, 1362, 2073, 2188, 2223, 2355, 2717
DpnII GATC 8 cut(s) 70, 609, 1360, 2071, 2186, 2221, 2353, 2715
DraI TTTAAA 2 cut(s) 1599, 2374
DraIII CACNNNGTG 1 cut(s) 1667
EaeI YGGCCR 1 cut(s) 3347
Eam1104I CTCTTC 5 cut(s) 565, 2127, 2244, 2577, 3085
EarI CTCTTC 5 cut(s) 565, 2127, 2244, 2577, 3085
Ecl136II GAGCTC 2 cut(s) 248, 2887
Eco130I CCWWGG 4 cut(s) 1034, 1379, 2525, 3295
Eco24I GRGCYC 3 cut(s) 222, 250, 2889
Eco31I GGTCTC 1 cut(s) 3355
Eco32I GATATC 2 cut(s) 485, 2207
Eco47I GGWCC 3 cut(s) 58, 325, 913
Eco47III AGCGCT 1 cut(s) 2163
Eco53kI GAGCTC 2 cut(s) 248, 2887
Eco57I CTGAAG 3 cut(s) 468, 2151, 2942
Eco72I CACGTG 1 cut(s) 2579
Eco88I CYCGRG 2 cut(s) 92, 1734
EcoICRI GAGCTC 2 cut(s) 248, 2887
EcoO109I RGGNCCY 1 cut(s) 1152
EcoRI GAATTC 2 cut(s) 1478, 3007
EcoRII CCWGG 9 cut(s) 386, 812, 899, 962, 998, 1866, 2662, 3069, 3177
EcoRV GATATC 2 cut(s) 485, 2207
EcoT14I CCWWGG 4 cut(s) 1034, 1379, 2525, 3295
EcoT22I ATGCAT 1 cut(s) 1051
EcoT38I GRGCYC 3 cut(s) 222, 250, 2889
ErhI CCWWGG 4 cut(s) 1034, 1379, 2525, 3295
Esp3I CGTCTC 1 cut(s) 852
FalI AAGNNNNNCTT 6 cut(s) 1791, 1823, 3081, 3113, 3279, 3311
FaqI GGGAC 1 cut(s) 217
FauNDI CATATG 2 cut(s) 1082, 2383
FbaI TGATCA 1 cut(s) 2221
FokI GGATG 8 cut(s) 461, 916, 941, 1212, 1513, 2093, 3037, 3471
FriOI GRGCYC 3 cut(s) 222, 250, 2889
GlaI GCGC 2 cut(s) 2163, 2707
GsuI CTGGAG 3 cut(s) 480, 1988, 2421
HaeII RGCGCY 1 cut(s) 2165
HaeIII GGCC 7 cut(s) 131, 519, 1154, 1559, 1733, 1871, 3349
HapII CCGG 2 cut(s) 216, 300
HhaI GCGC 2 cut(s) 2164, 2708
Hin6I GCGC 2 cut(s) 2162, 2706
HinP1I GCGC 2 cut(s) 2162, 2706
HindIII AAGCTT 7 cut(s) 675, 1431, 1499, 3105, 3237, 3510, 3521
HpaII CCGG 2 cut(s) 216, 300
HphI GGTGA 5 cut(s) 375, 878, 1181, 1325, 2855
Hpy166II GTNNAC 7 cut(s) 457, 546, 1571, 2171, 2513, 2854, 3452
Hpy8I GTNNAC 7 cut(s) 457, 546, 1571, 2171, 2513, 2854, 3452
Hpy99I CGWCG 1 cut(s) 39
HpyCH4IV ACGT 3 cut(s) 1567, 2515, 2578
HpySE526I ACGT 3 cut(s) 1567, 2515, 2578
HspAI GCGC 2 cut(s) 2162, 2706
Ksp22I TGATCA 1 cut(s) 2221
KspI CCGCGG 1 cut(s) 481
Kzo9I GATC 8 cut(s) 70, 609, 1360, 2071, 2186, 2221, 2353, 2715
LguI GCTCTTC 1 cut(s) 565
LmnI GCTCC 8 cut(s) 109, 432, 764, 779, 1544, 2402, 2884, 3166
MaeII ACGT 3 cut(s) 1567, 2515, 2578
MaeIII GTNAC 6 cut(s) 381, 1066, 1158, 1169, 1803, 2111
MalI GATC 8 cut(s) 72, 611, 1362, 2073, 2188, 2223, 2355, 2717
MboI GATC 8 cut(s) 70, 609, 1360, 2071, 2186, 2221, 2353, 2715
MfeI CAATTG 2 cut(s) 1253, 3258
MflI RGATCY 2 cut(s) 1360, 2715
MlsI TGGCCA 1 cut(s) 3349
MluNI TGGCCA 1 cut(s) 3349
MlyI GAGTC 6 cut(s) 56, 284, 1106, 1424, 3226, 3457
MmeI TCCRAC 2 cut(s) 303, 1080
Mox20I TGGCCA 1 cut(s) 3349
Mph1103I ATGCAT 1 cut(s) 1051
MroXI GAANNNNTTC 1 cut(s) 3093
MscI TGGCCA 1 cut(s) 3349
MseI TTAA 7 cut(s) 756, 1598, 2088, 2267, 2361, 2373, 2859
MslI CAYNNNNRTG 4 cut(s) 772, 2467, 3161, 3457
Msp20I TGGCCA 1 cut(s) 3349
MspA1I CMGCKG 3 cut(s) 480, 1931, 1937
MspCI CTTAAG 1 cut(s) 2087
MspI CCGG 2 cut(s) 216, 300
MunI CAATTG 2 cut(s) 1253, 3258
Mva1269I GAATGC 4 cut(s) 29, 1283, 1592, 1762
MvaI CCWGG 9 cut(s) 388, 814, 901, 964, 1000, 1868, 2664, 3071, 3179
MvnI CGCG 1 cut(s) 480
NciI CCSGG 2 cut(s) 217, 301
NcoI CCATGG 3 cut(s) 1034, 1379, 2525
NdeI CATATG 2 cut(s) 1082, 2383
NdeII GATC 8 cut(s) 70, 609, 1360, 2071, 2186, 2221, 2353, 2715
NheI GCTAGC 1 cut(s) 3274
NlaIV GGNNCC 5 cut(s) 643, 1153, 1546, 2531, 3154
NmuCI GTSAC 2 cut(s) 381, 1169
NsiI ATGCAT 1 cut(s) 1051
NspI RCATGY 5 cut(s) 473, 1235, 1393, 2248, 2460
NspV TTCGAA 1 cut(s) 87
PasI CCCWGGG 1 cut(s) 387
PciI ACATGT 1 cut(s) 2244
PciSI GCTCTTC 1 cut(s) 565
PcsI WCGNNNNNNNCGW 1 cut(s) 219
PctI GAATGC 4 cut(s) 29, 1283, 1592, 1762
PdmI GAANNNNTTC 1 cut(s) 3093
PfeI GAWTC 8 cut(s) 224, 597, 1400, 1817, 1956, 1982, 2272, 2933
PflMI CCANNNNNTGG 1 cut(s) 1385
PfoI TCCNGGA 1 cut(s) 962
PleI GAGTC 6 cut(s) 55, 284, 1106, 1423, 3225, 3456
PmaCI CACGTG 1 cut(s) 2579
PmlI CACGTG 1 cut(s) 2579
PpsI GAGTC 6 cut(s) 55, 284, 1106, 1423, 3225, 3456
Ppu21I YACGTR 1 cut(s) 2579
PscI ACATGT 1 cut(s) 2244
PshBI ATTAAT 1 cut(s) 756
PsiI TTATAA 1 cut(s) 2901
Psp124BI GAGCTC 2 cut(s) 250, 2889
Psp6I CCWGG 9 cut(s) 386, 812, 899, 962, 998, 1866, 2662, 3069, 3177
PspCI CACGTG 1 cut(s) 2579
PspGI CCWGG 9 cut(s) 386, 812, 899, 962, 998, 1866, 2662, 3069, 3177
PspN4I GGNNCC 5 cut(s) 643, 1153, 1546, 2531, 3154
PspPI GGNCC 6 cut(s) 58, 325, 913, 1152, 1732, 1870
PstI CTGCAG 4 cut(s) 1423, 1930, 2505, 3370
PstNI CAGNNNCTG 1 cut(s) 2473
PsuI RGATCY 2 cut(s) 1360, 2715
PvuII CAGCTG 1 cut(s) 1931
RsaI GTAC 6 cut(s) 592, 823, 1301, 2170, 3343, 3418
RsaNI GTAC 6 cut(s) 591, 822, 1300, 2169, 3342, 3417
RseI CAYNNNNRTG 4 cut(s) 772, 2467, 3161, 3457
SacI GAGCTC 2 cut(s) 250, 2889
SacII CCGCGG 1 cut(s) 481
SapI GCTCTTC 1 cut(s) 565
SaqAI TTAA 7 cut(s) 756, 1598, 2088, 2267, 2361, 2373, 2859
Sau3AI GATC 8 cut(s) 70, 609, 1360, 2071, 2186, 2221, 2353, 2715
Sau96I GGNCC 6 cut(s) 58, 325, 913, 1152, 1732, 1870
ScaI AGTACT 1 cut(s) 823
SchI GAGTC 6 cut(s) 56, 284, 1106, 1424, 3226, 3457
SfcI CTRYAG 6 cut(s) 783, 1419, 1926, 2421, 2501, 3366
Sfr303I CCGCGG 1 cut(s) 481
SfuI TTCGAA 1 cut(s) 87
SgrBI CCGCGG 1 cut(s) 481
SinI GGWCC 3 cut(s) 58, 325, 913
SmiI ATTTAAAT 1 cut(s) 1599
SmiMI CAYNNNNRTG 4 cut(s) 772, 2467, 3161, 3457
SmlI CTYRAG 6 cut(s) 557, 1114, 1163, 2087, 3231, 3279
SmoI CTYRAG 6 cut(s) 557, 1114, 1163, 2087, 3231, 3279
SpeI ACTAGT 1 cut(s) 2173
SspI AATATT 2 cut(s) 1464, 2905
SstI GAGCTC 2 cut(s) 250, 2889
StyI CCWWGG 4 cut(s) 1034, 1379, 2525, 3295
SwaI ATTTAAAT 1 cut(s) 1599
TaiI ACGT 3 cut(s) 1570, 2518, 2581
TaqI TCGA 8 cut(s) 87, 222, 579, 612, 2083, 3014, 3407, 3469
TatI WGTACW 3 cut(s) 821, 1299, 3416
TauI GCSGC 4 cut(s) 134, 155, 1937, 2623
TfiI GAWTC 8 cut(s) 224, 597, 1400, 1817, 1956, 1982, 2272, 2933
Tru1I TTAA 7 cut(s) 756, 1598, 2088, 2267, 2361, 2373, 2859
Tru9I TTAA 7 cut(s) 756, 1598, 2088, 2267, 2361, 2373, 2859
TscAI CASTG 5 cut(s) 553, 1227, 1696, 2356, 2474
TseFI GTSAC 2 cut(s) 381, 1169
Tsp45I GTSAC 2 cut(s) 381, 1169
TspGWI ACGGA 2 cut(s) 283, 2099
TspRI CASTG 5 cut(s) 553, 1227, 1696, 2356, 2474
Van91I CCANNNNNTGG 1 cut(s) 1385
Vha464I CTTAAG 1 cut(s) 2087
VneI GTGCAC 2 cut(s) 455, 1569
VpaK11BI GGWCC 3 cut(s) 58, 325, 913
VspI ATTAAT 1 cut(s) 756
XapI RAATTY 5 cut(s) 926, 1075, 1478, 2687, 3007
XbaI TCTAGA 3 cut(s) 1762, 1952, 2068
XceI RCATGY 5 cut(s) 473, 1235, 1393, 2248, 2460
XcmI CCANNNNNNNNNTGG 1 cut(s) 1598
XmnI GAANNNNTTC 1 cut(s) 3093
ZrmI AGTACT 1 cut(s) 823
Zsp2I ATGCAT 1 cut(s) 1051
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.