Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0006203

Physical Location & Seq

Genomic Coordinates Reverse (-)

249659 .. 258307

Gene Structure 8649 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G001100.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3537 bp

ATGCAAGAAACGGAACAAGAAAAGGAATGTGAGCTGCGACGCTTGGAGGAGTGTATAGAGGCCCATCCAGATGATCCCTCCCTTCGCTTCGAACTCGGAGTGTTGTTGTGGGAGGAGTGGGATACCAAGGAAAAAGCGGCAGAACAATTCGTAATAGCAGCGAAATTGAAGCCTGAGATTGAGAAGGGAGGGGCATTCAGATATCTAGGGATTTATTACGCAGGTCTGGACTCCCAGTCCCATAGCCAGAGAGCTCTTAAGTGCTTCCAGAAAGCCGTCTCTCTCAATCCTGATGACTCCCTCTCTGGGGAAGCCTTGTGTGATTTGTTGGACCAGCAAGGAAAGGAGAGCTTGGAGGTGGCTGTGTGCCGGGAGGCTTCCCAAAAATCCCCCAGGGCCTTTTGGGCTTTCCAAAGACTCGGTTACTTGCTACTCCATCAAAATAAATGCTCTGAAGCTGTCCACAGTCTTCAACATGCCATTCGAGGCTATCCTACCTCTCCACATCTCTGGGAGGCTCTTGGCCTTGCCTACCAGCGACTAGGCAGGTTCACTGCTGCTCTCAAGTCTTATGGAAGAGCCATTGAATTGGAGGGTACAAGAATCTTTGCTTTGCTTGAAAGCGGAAACATCTTTTTGATGCTTGGTTCCTTTCGACAGGGAGTTGAGGCATTTCAGCAAGCATTAGAGATTTCTCCCAAAAGTGTCTCTGCGCACTATGGGCTTGCTTCTGGGCTGCTGTGTTTGGCAAAGGAATGCAATAATTTGGGAGCATATAGATGGGGTGCTACAGTGCTAGAGGAGGCATCTAAAGTTGCCTGGATGTGTACTCAATTAGCTGGAAATATGTCATCTATTTGGAAGCTGCATGGTGATATACAACTTACTTATGCAAAATGTTATCCATGGATGGAGGAGGACCACAGTTTAGAGTTTGATGTGGAAGCCTTTGATAATTCCATCCTTTCATGGAAGCGTACCTGCTGTTTGGCTGCGAAAACTGCCAGGTGCTCTTATCAGCGGGCTTTGCACTTATCCCCATGGCAAGCTAATATATATGCTGACATTGCAGTAACTTCAGATCTTGTAGACTCTTTTGATAACAGTCCTGGACATGAATTAAGTGCTTGGCAGCCATCCGAGAAGATGGCTTTGGGAGCCCTGTTACTCGAGGGTGACAATTCTGAGTTTTGGGTAGCATTGGGATGTTTGTCTGATCATAATGCATTGAAACAACATGCTCTAATCAGGGGATTGCATTTGAATGTATCTCTAGCTGTTGCGTGGGCATACTTAGGGAAGCTGTACAGAAAACAAGGTGAGAAGCAATTTGCAAGGCAAGCATTTGATTGTGCTAGAAGTATAGATCCTTCACTCGCGTTACCATGGGCTGGCATGTCAGCTGATTTTCATGCCAGAGAGTCTGCAGCTGGAGAAGCTTATGAGAGCTGCTTACGAGCTGTGCAGATATTGCCTCTTGCCGAATTCCAAATGGGTCTTGCAAAACTTGCTCTTGGTTCAGGGAATCTTTCATCTTCGCAGGTCTTTGGAGCCATCAGACAGGCCATGCAGCGTGCACCTCACTATCCTGAATGCCATAATTTAACTGGGCTAGTCTATGAGGCACAATCCAATTATCGGTCTGCCGCTGCTTCTTATAGACTAGCACGCTATGCAATCACCAATTTGCCAGGCAGTGATAGAAAATCTCATATGACGGATATATCAATCAATTTGGCTCGATCACTTAGTAGGGCAGGGAATGCTCTAGATGCTTTGCAGGAATGTGAAGATTTGAAGAAAGAAGGGTTGCTTGATGTGGAAGGTTTGCAAATATATGCTTTCTCCTTGTGGCAACTTGGTAAGACTGAACTGGCCCTCTCTGTGGCAAGAAATCTGGCAGTGAGTGTCTCTACAATGGAACAAACATCTGCAGCTGCCTCTGTTGTTTTTATCTGTAGATTCCTGTATCATATTTCTGGACTGGATTCGGCAATCAATAGCATTCTGAAGATGCCAAAGCAACTGTTTCAGAGTTCAAAGATCAGTTTCATAGTATCTGCTATTCATGCTCTAGATCGAAGTAATCGGCTTGAGTCTGTTGTGTCAAGCAGTCGTTACTATCTTAAATCTCATGAAGAGATAACTGGAATGCACTTTTTGATAGCACTTGGTAAACTAATAAAACATGGATCAGAACACCGTTTGGGATATCAAAGTGGAATTGATCACCTTAGGAAAGCTCTTCACATGTATCCTAACAGTAGCTTGTTAAGGAACCTTCTTGGTTATCTTTTGTTGTGCAGTGAAGAATGGAATGATACCCACATTGCAACTAGGTGTTGCGACATAGACGCTACTAATCCAAGTAAAGGCGGTTTAAAATCAGCATATGAAATTCTTGGTGCTGGAGCAGTCGCTTGCTATGCTGTTGGCAATTGCAGTCCTAAGTTCTCTTACCCAACATGCACATGCCAGTGCCTGAATGAACCTGGAGCCATCCAGCAACTACAGAAATGTTTACGCAGAGAACCATGGAACCAGAACATAAGATATCTGCTTGTTCTCAATTTACTGCAGAAGGCACGTGAAGAGAGATTTCCTTGCCATCTTTGTATTATACTTGAGCGGCTAATAAGTGTAGCTCTTTCTGATGAAGTTTATCATAATACGGGCATGTCTTATGAATATAAGAAATTCCAGCTTCTACTTTGTGCTTCGGAGATCTGTTTGCAAGGTGGTAATCTGACTAGCTGTATCAACCGTGCCAAAAACGCTTCATCGATTATGCTTCCCGATGATTGTCTTTTCTTTGCACACTTGCTATTACTCCGTGCCTATGCCTTAGAATGTGACACTGTAAACCTTCAAAAAGAGTATATAAGATGCTTGGAGCTCAAGACAGATCATCATATTGGTTGGATATGTCTAAAGTTCATTGAATATCGTTATGAATTGCAAAGTGATTTGGATATTTTAGAGTCTAGCTTCAAAGAATGCTCAAAGGAGCGAATGAATTCATGGAATAGGTGGAGGGCTCTATTCATTCTGGTGCAAGGCTTGATATCTATATGGAGCCAGGACATTATTTCTGCTGAACAGTTTTTTGCACAAGCTTGTTCATTGGCGGGTGATGAGAGCAGCCTCCTGCTTTGTCATGGTGCCACCTGTATGGAGCTTTCTCGCCAGGGGTGTTCGCAGTTTTTATCACTTGCTGTACGGAGTCTCACTAAAGCTCAAAAAGGACCTCTCATTCCCTTACCGATTGTCTCAGCATTGCTAGCTCAAGCAGCTGGAAGTCTTGGTTCAAAAGAGAAGTGGGAGAAAAATCTCCGTCTTGAATGGCCTACTTGGCCCCAAGAAATGAGGCCTGCAGAGCTGTTCTTTCAGATGCATTTGCTTGCAAGACAGTTGAAAGCTAGTTCAGCTTCCAGAATTGAGTTTTGTCAGAGTCCGGAGAAGTGGGTTCTTCGAGCAATTCACACAAACCCTTCTTGTATGAGATATTGGAAGGTTTTGCAGAAGCTCGTGGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000184 GO:0000288 GO:0000291 GO:0000785 GO:0000956 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0006139 GO:0006401 GO:0006402 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009892 GO:0009987 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0016070 GO:0016071 GO:0016441 GO:0016458 GO:0019222 GO:0019439 GO:0032991 GO:0034427 GO:0034641 GO:0034655 GO:0035327 GO:0040029 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043928 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044422 GO:0044424 GO:0044427 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046700 GO:0048519 GO:0050789 GO:0055087 GO:0060255 GO:0065007 GO:0070478 GO:0071704 GO:0090304 GO:1901360 GO:1901361 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko03018 map03018

Pfam Domains

Protein Families

TPR_16 TPR_2 TPR_8

Protein Analysis

1179

Amino Acids

132.09

Weight (kDa)

6.74

Isoelectric Point (pI)

51.75

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006203)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G76630 AT1G76630 AT1G76630
fragaria_vesca	FvH4_5g26690 FvH4_5g26690 FvH4_5g26690 FvH4_5g26690 FvH4_5g26690 FvH4_5g26690
malus_domestica	MD06G1000600.v1.1
prunus_persica	Prupe.5G001100_v2.0.a1 Prupe.5G001100_v2.0.a1 Prupe.5G001100_v2.0.a1 Prupe.5G001100_v2.0.a1 Prupe.5G001100_v2.0.a1 Prupe.5G001100_v2.0.a1
pyrus_communis	pycom06g00040
rosa_chinensis	RchiOBHm_Chr7g0217581
rosa_laevigata	RLG00000002459
rosa_multiflora	Rmu_sc0006161.1_g000003
rosa_roxburghii	Rroxscaffold_3G00241850
rosa_rugosa	Rorug07G0170300
rosa_samantha	Rh7AG310100 Rh7BG301200 Rh7CG329200 Rh7DG309700
rosa_wichuraiana	Rw7G026300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	714
Acc36I	ACCTGC	4 cut(s)	212, 537, 989, 1531
AccB1I	GGYRCC	1 cut(s)	3161
AccB7I	CCANNNNNTGG	1 cut(s)	1391
AccBSI	CCGCTC	1 cut(s)	2629
AccI	GTMKAC	1 cut(s)	1089
AccII	CGCG	1 cut(s)	1379
AccIII	TCCGGA	1 cut(s)	3454
AciI	CCGC	7 cut(s)	137, 624, 1021, 1647, 2376, 2629, 3128
AclWI	GGATC	3 cut(s)	68, 1361, 2200
AcsI	RAATTY	4 cut(s)	1484, 2397, 2696, 3016
AcuI	CTGAAG	3 cut(s)	474, 1062, 2030
AcvI	CACGTG	1 cut(s)	2588
AfaI	GTAC	5 cut(s)	598, 829, 979, 1307, 3219
AfiI	CCNNNNNNNGG	6 cut(s)	306, 307, 1391, 1638, 1885, 2372
AflII	CTTAAG	1 cut(s)	257
AflIII	ACRYGT	1 cut(s)	2250
AhdI	GACNNNNNGTC	1 cut(s)	235
AjnI	CCWGG	8 cut(s)	392, 818, 1004, 1108, 1690, 2491, 3078, 3186
AjuI	GAANNNNNNNTTGG	2 cut(s)	1136, 1168
Alw21I	GWGCWC	4 cut(s)	256, 1013, 1579, 2898
Alw26I	GTCTC	5 cut(s)	283, 712, 1915, 3230, 3274
Alw44I	GTGCAC	1 cut(s)	1575
AlwI	GGATC	3 cut(s)	68, 1361, 2200
AlwNI	CAGNNNCTG	1 cut(s)	2482
Ama87I	CYCGRG	1 cut(s)	1169
Aor13HI	TCCGGA	1 cut(s)	3454
AoxI	GGCC	8 cut(s)	60, 396, 523, 1563, 1875, 3344, 3353, 3368
ApaLI	GTGCAC	1 cut(s)	1575
ApoI	RAATTY	4 cut(s)	1484, 2397, 2696, 3016
Asp700I	GAANNNNTTC	1 cut(s)	3016
AspLEI	GCGC	1 cut(s)	715
AspS9I	GGNCC	7 cut(s)	61, 331, 396, 919, 1876, 3245, 3354
AsuC2I	CCSGG	1 cut(s)	371
AsuHPI	GGTGA	6 cut(s)	884, 1187, 1331, 1672, 2222, 3143
AsuII	TTCGAA	1 cut(s)	90
AsuNHI	GCTAGC	1 cut(s)	3280
AvaI	CYCGRG	1 cut(s)	1169
AvaII	GGWCC	3 cut(s)	331, 919, 3245
AxyI	CCTNAGG	1 cut(s)	2234
BaeGI	GKGCMC	1 cut(s)	1579
BanI	GGYRCC	1 cut(s)	3161
BanII	GRGCYC	4 cut(s)	256, 1162, 2898, 3040
BarI	GAAGNNNNNNTAC	2 cut(s)	1354, 1386
BauI	CACGAG	1 cut(s)	3527
BbrPI	CACGTG	1 cut(s)	2588
BbsI	GAAGAC	1 cut(s)	461
Bbv12I	GWGCWC	4 cut(s)	256, 1013, 1579, 2898
BceAI	ACGGC	1 cut(s)	260
BciT130I	CCWGG	8 cut(s)	394, 820, 1006, 1110, 1692, 2493, 3080, 3188
BciVI	GTATCC	2 cut(s)	115, 2265
BclI	TGATCA	2 cut(s)	1216, 2227
BcnI	CCSGG	1 cut(s)	371
BcoDI	GTCTC	5 cut(s)	283, 712, 1915, 3230, 3274
BfmI	CTRYAG	7 cut(s)	789, 1425, 1932, 1957, 2510, 2576, 3372
BfrI	CTTAAG	1 cut(s)	257
BfuAI	ACCTGC	4 cut(s)	212, 537, 989, 1531
BfuI	GTATCC	2 cut(s)	115, 2265
BglI	GCCNNNNNGGC	2 cut(s)	404, 3352
BglII	AGATCT	2 cut(s)	1081, 2724
Bme1390I	CCNGG	9 cut(s)	371, 394, 820, 1006, 1110, 1692, 2493, 3080, 3188
Bme18I	GGWCC	3 cut(s)	331, 919, 3245
BmeRI	GACNNNNNGTC	1 cut(s)	235
BmeT110I	CYCGRG	1 cut(s)	1169
BmgT120I	GGNCC	7 cut(s)	61, 331, 396, 919, 1876, 3245, 3354
BmiI	GGNNCC	9 cut(s)	649, 1159, 1552, 2279, 2497, 2540, 3077, 3163, 3356
BmrFI	CCNGG	9 cut(s)	371, 394, 820, 1006, 1110, 1692, 2493, 3080, 3188
BmrI	ACTGGG	2 cut(s)	229, 1617
BmsI	GCATC	6 cut(s)	630, 815, 1762, 2004, 2876, 3381
BmtI	GCTAGC	1 cut(s)	3284
BmuI	ACTGGG	2 cut(s)	229, 1617
BpiI	GAAGAC	1 cut(s)	461
BpmI	CTGGAG	3 cut(s)	1452, 2430, 2514
Bpu14I	TTCGAA	1 cut(s)	90
BpuEI	CTTGAG	5 cut(s)	548, 2114, 2645, 2882, 3270
BpuMI	CCSGG	1 cut(s)	371
Bsa29I	ATCGAT	1 cut(s)	2783
BsaAI	YACGTR	1 cut(s)	2588
BsaJI	CCNNGG	8 cut(s)	126, 392, 393, 905, 1040, 1385, 2534, 3187
BsaWI	WCCGGW	1 cut(s)	3454
Bsc4I	CCNNNNNNNGG	6 cut(s)	306, 307, 1391, 1638, 1885, 2372
Bse1I	ACTGG	6 cut(s)	235, 1612, 1878, 1989, 2152, 2476
Bse21I	CCTNAGG	1 cut(s)	2234
Bse3DI	GCAATG	3 cut(s)	1065, 2328, 3275
BseAI	TCCGGA	1 cut(s)	3454
BseBI	CCWGG	8 cut(s)	394, 820, 1006, 1110, 1692, 2493, 3080, 3188
BseCI	ATCGAT	1 cut(s)	2783
BseDI	CCNNGG	8 cut(s)	126, 392, 393, 905, 1040, 1385, 2534, 3187
BseGI	GGATG	7 cut(s)	64, 828, 915, 960, 1136, 1211, 2499
BseLI	CCNNNNNNNGG	6 cut(s)	306, 307, 1391, 1638, 1885, 2372
BseMI	GCAATG	3 cut(s)	1065, 2328, 3275
BseMII	CTCAG	3 cut(s)	165, 1176, 3285
BseNI	ACTGG	6 cut(s)	235, 1612, 1878, 1989, 2152, 2476
BseRI	GAGGAG	4 cut(s)	62, 128, 815, 929
BseSI	GKGCMC	1 cut(s)	1579
BsgI	GTGCAG	2 cut(s)	1484, 2323
Bsh1236I	CGCG	1 cut(s)	1379
BshFI	GGCC	8 cut(s)	62, 398, 525, 1565, 1877, 3346, 3355, 3370
BshNI	GGYRCC	1 cut(s)	3161
BshVI	ATCGAT	1 cut(s)	2783
BsiHKAI	GWGCWC	4 cut(s)	256, 1013, 1579, 2898
BsiHKCI	CYCGRG	1 cut(s)	1169
BsiSI	CCGG	2 cut(s)	370, 3455
BslFI	GGGAC	1 cut(s)	223
BslI	CCNNNNNNNGG	6 cut(s)	306, 307, 1391, 1638, 1885, 2372
BsmAI	GTCTC	5 cut(s)	283, 712, 1915, 3230, 3274
BsmBI	CGTCTC	1 cut(s)	283
BsmFI	GGGAC	1 cut(s)	223
BsmI	GAATGC	7 cut(s)	194, 761, 1598, 1768, 2004, 2157, 3002
BsnI	GGCC	8 cut(s)	62, 398, 525, 1565, 1877, 3346, 3355, 3370
BsoBI	CYCGRG	1 cut(s)	1169
Bsp119I	TTCGAA	1 cut(s)	90
Bsp1286I	GDGCHC	6 cut(s)	256, 1013, 1162, 1579, 2898, 3040
Bsp13I	TCCGGA	1 cut(s)	3454
Bsp1407I	TGTACA	1 cut(s)	1305
Bsp19I	CCATGG	4 cut(s)	905, 1040, 1385, 2534
BspACI	CCGC	7 cut(s)	137, 624, 1021, 1647, 2376, 2629, 3128
BspANI	GGCC	8 cut(s)	62, 398, 525, 1565, 1877, 3346, 3355, 3370
BspCNI	CTCAG	3 cut(s)	166, 1177, 3284
BspDI	ATCGAT	1 cut(s)	2783
BspEI	TCCGGA	1 cut(s)	3454
BspFNI	CGCG	1 cut(s)	1379
BspHI	TCATGA	1 cut(s)	2134
BspLI	GGNNCC	9 cut(s)	649, 1159, 1552, 2279, 2497, 2540, 3077, 3163, 3356
BspMAI	CTGCAG	4 cut(s)	1429, 1936, 2580, 3376
BspMI	ACCTGC	4 cut(s)	212, 537, 989, 1531
BspOI	GCTAGC	1 cut(s)	3284
BspPI	GGATC	3 cut(s)	68, 1361, 2200
BspQI	GCTCTTC	2 cut(s)	571, 2250
BspT104I	TTCGAA	1 cut(s)	90
BspT107I	GGYRCC	1 cut(s)	3161
BspTI	CTTAAG	1 cut(s)	257
BsrBI	CCGCTC	1 cut(s)	2629
BsrDI	GCAATG	3 cut(s)	1065, 2328, 3275
BsrGI	TGTACA	1 cut(s)	1305
BsrI	ACTGG	6 cut(s)	235, 1612, 1878, 1989, 2152, 2476
BssECI	CCNNGG	8 cut(s)	126, 392, 393, 905, 1040, 1385, 2534, 3187
BssSI	CACGAG	1 cut(s)	3527
BssT1I	CCWWGG	5 cut(s)	126, 905, 1040, 1385, 2534
Bst2BI	CACGAG	1 cut(s)	3527
Bst2UI	CCWGG	8 cut(s)	394, 820, 1006, 1110, 1692, 2493, 3080, 3188
Bst6I	CTCTTC	4 cut(s)	571, 2133, 2250, 2586
BstAFI	CTTAAG	1 cut(s)	257
BstAPI	GCANNNNNTGC	4 cut(s)	1471, 1508, 1673, 1763
BstAUI	TGTACA	1 cut(s)	1305
BstBAI	YACGTR	1 cut(s)	2588
BstBI	TTCGAA	1 cut(s)	90
BstDEI	CTNAG	8 cut(s)	174, 1185, 1294, 1748, 2234, 2448, 2845, 3271
BstDSI	CCRYGG	4 cut(s)	905, 1040, 1385, 2534
BstF5I	GGATG	7 cut(s)	64, 828, 915, 960, 1136, 1211, 2499
BstFNI	CGCG	1 cut(s)	1379
BstHHI	GCGC	1 cut(s)	715
BstMAI	GTCTC	5 cut(s)	283, 712, 1915, 3230, 3274
BstNI	CCWGG	8 cut(s)	394, 820, 1006, 1110, 1692, 2493, 3080, 3188
BstNSI	RCATGY	7 cut(s)	479, 1241, 1399, 2254, 2469, 2475, 2680
BstSCI	CCNGG	9 cut(s)	369, 392, 818, 1004, 1108, 1690, 2491, 3078, 3186
BstSFI	CTRYAG	7 cut(s)	789, 1425, 1932, 1957, 2510, 2576, 3372
BstSLI	GKGCMC	1 cut(s)	1579
BstUI	CGCG	1 cut(s)	1379
BstV2I	GAAGAC	1 cut(s)	461
BstX2I	RGATCY	3 cut(s)	1081, 1366, 2724
BstXI	CCANNNNNNTGG	3 cut(s)	510, 589, 3172
BstYI	RGATCY	3 cut(s)	1081, 1366, 2724
Bsu15I	ATCGAT	1 cut(s)	2783
Bsu36I	CCTNAGG	1 cut(s)	2234
BsuI	GTATCC	2 cut(s)	115, 2265
BsuRI	GGCC	8 cut(s)	62, 398, 525, 1565, 1877, 3346, 3355, 3370
BsuTUI	ATCGAT	1 cut(s)	2783
BtgI	CCRYGG	4 cut(s)	905, 1040, 1385, 2534
BtsCI	GGATG	7 cut(s)	64, 828, 915, 960, 1136, 1211, 2499
BtsI	GCAGTG	4 cut(s)	552, 1702, 1908, 2311
BtsIMutI	CAGTG	7 cut(s)	552, 798, 1702, 1908, 2311, 2483, 2856
BveI	ACCTGC	4 cut(s)	212, 537, 989, 1531
CaiI	CAGNNNCTG	1 cut(s)	2482
CciI	TCATGA	1 cut(s)	2134
CfoI	GCGC	1 cut(s)	715
Cfr13I	GGNCC	7 cut(s)	61, 331, 396, 919, 1876, 3245, 3354
ClaI	ATCGAT	1 cut(s)	2783
CseI	GACGC	2 cut(s)	48, 2363
Csp6I	GTAC	5 cut(s)	597, 828, 978, 1306, 3218
CviQI	GTAC	5 cut(s)	597, 828, 978, 1306, 3218
DdeI	CTNAG	8 cut(s)	174, 1185, 1294, 1748, 2234, 2448, 2845, 3271
DraI	TTTAAA	1 cut(s)	2382
DriI	GACNNNNNGTC	1 cut(s)	235
Eam1104I	CTCTTC	4 cut(s)	571, 2133, 2250, 2586
Eam1105I	GACNNNNNGTC	1 cut(s)	235
EarI	CTCTTC	4 cut(s)	571, 2133, 2250, 2586
Ecl136II	GAGCTC	2 cut(s)	254, 2896
Eco130I	CCWWGG	5 cut(s)	126, 905, 1040, 1385, 2534
Eco147I	AGGCCT	1 cut(s)	3370
Eco24I	GRGCYC	4 cut(s)	256, 1162, 2898, 3040
Eco32I	GATATC	4 cut(s)	203, 2213, 2555, 3066
Eco47I	GGWCC	3 cut(s)	331, 919, 3245
Eco53kI	GAGCTC	2 cut(s)	254, 2896
Eco57I	CTGAAG	3 cut(s)	474, 1062, 2030
Eco72I	CACGTG	1 cut(s)	2588
Eco81I	CCTNAGG	1 cut(s)	2234
Eco88I	CYCGRG	1 cut(s)	1169
EcoICRI	GAGCTC	2 cut(s)	254, 2896
EcoO109I	RGGNCCY	2 cut(s)	396, 3245
EcoRI	GAATTC	2 cut(s)	1484, 3016
EcoRII	CCWGG	8 cut(s)	392, 818, 1004, 1108, 1690, 2491, 3078, 3186
EcoRV	GATATC	4 cut(s)	203, 2213, 2555, 3066
EcoT14I	CCWWGG	5 cut(s)	126, 905, 1040, 1385, 2534
EcoT22I	ATGCAT	2 cut(s)	1228, 3396
EcoT38I	GRGCYC	4 cut(s)	256, 1162, 2898, 3040
ErhI	CCWWGG	5 cut(s)	126, 905, 1040, 1385, 2534
Esp3I	CGTCTC	1 cut(s)	283
FalI	AAGNNNNNCTT	4 cut(s)	335, 367, 1797, 1829
FaqI	GGGAC	1 cut(s)	223
FauI	CCCGC	2 cut(s)	1014, 3121
FauNDI	CATATG	2 cut(s)	1713, 2392
FbaI	TGATCA	2 cut(s)	1216, 2227
FblI	GTMKAC	1 cut(s)	1089
FokI	GGATG	7 cut(s)	51, 835, 922, 947, 1123, 1218, 2486
FriOI	GRGCYC	4 cut(s)	256, 1162, 2898, 3040
FspI	TGCGCA	1 cut(s)	714
GlaI	GCGC	1 cut(s)	714
GsuI	CTGGAG	3 cut(s)	1452, 2430, 2514
HaeIII	GGCC	8 cut(s)	62, 398, 525, 1565, 1877, 3346, 3355, 3370
HapII	CCGG	2 cut(s)	370, 3455
HgaI	GACGC	2 cut(s)	48, 2363
HhaI	GCGC	1 cut(s)	715
Hin6I	GCGC	1 cut(s)	713
HinP1I	GCGC	1 cut(s)	713
HindIII	AAGCTT	2 cut(s)	1437, 3114
HpaII	CCGG	2 cut(s)	370, 3455
HphI	GGTGA	6 cut(s)	884, 1187, 1331, 1672, 2222, 3143
Hpy166II	GTNNAC	8 cut(s)	463, 552, 828, 1090, 1577, 2177, 2522, 2863
Hpy8I	GTNNAC	8 cut(s)	463, 552, 828, 1090, 1577, 2177, 2522, 2863
Hpy99I	CGWCG	1 cut(s)	42
HpyCH4IV	ACGT	1 cut(s)	2587
HpyF3I	CTNAG	8 cut(s)	174, 1185, 1294, 1748, 2234, 2448, 2845, 3271
HpySE526I	ACGT	1 cut(s)	2587
HspAI	GCGC	1 cut(s)	713
Kpn2I	TCCGGA	1 cut(s)	3454
Ksp22I	TGATCA	2 cut(s)	1216, 2227
LguI	GCTCTTC	2 cut(s)	571, 2250
LmnI	GCTCC	9 cut(s)	770, 1157, 1550, 2411, 2495, 2893, 3007, 3075, 3175
LweI	GCATC	6 cut(s)	630, 815, 1762, 2004, 2876, 3381
MaeII	ACGT	1 cut(s)	2587
MaeIII	GTNAC	7 cut(s)	422, 1072, 1164, 1175, 1380, 2117, 2852
MbiI	CCGCTC	1 cut(s)	2629
MfeI	CAATTG	1 cut(s)	2437
MflI	RGATCY	3 cut(s)	1081, 1366, 2724
MhlI	GDGCHC	6 cut(s)	256, 1013, 1162, 1579, 2898, 3040
MlyI	GAGTC	9 cut(s)	224, 290, 411, 1085, 1430, 2105, 2990, 3232, 3460
MmeI	TCCRAC	2 cut(s)	309, 2900
Mph1103I	ATGCAT	2 cut(s)	1228, 3396
MroI	TCCGGA	1 cut(s)	3454
MroXI	GAANNNNTTC	1 cut(s)	3016
MseI	TTAA	6 cut(s)	258, 1121, 1604, 2127, 2273, 2381
MslI	CAYNNNNRTG	8 cut(s)	69, 778, 1204, 1263, 2470, 2476, 3050, 3170
MspA1I	CMGCKG	6 cut(s)	1021, 1403, 1430, 1649, 1937, 3293
MspCI	CTTAAG	1 cut(s)	257
MspI	CCGG	2 cut(s)	370, 3455
MspR9I	CCNGG	9 cut(s)	371, 394, 820, 1006, 1110, 1692, 2493, 3080, 3188
MunI	CAATTG	1 cut(s)	2437
Mva1269I	GAATGC	7 cut(s)	194, 761, 1598, 1768, 2004, 2157, 3002
MvaI	CCWGG	8 cut(s)	394, 820, 1006, 1110, 1692, 2493, 3080, 3188
MvnI	CGCG	1 cut(s)	1379
NciI	CCSGG	1 cut(s)	371
NcoI	CCATGG	4 cut(s)	905, 1040, 1385, 2534
NdeI	CATATG	2 cut(s)	1713, 2392
NheI	GCTAGC	1 cut(s)	3280
NlaIV	GGNNCC	9 cut(s)	649, 1159, 1552, 2279, 2497, 2540, 3077, 3163, 3356
NmuCI	GTSAC	2 cut(s)	1175, 2852
NsbI	TGCGCA	1 cut(s)	714
NsiI	ATGCAT	2 cut(s)	1228, 3396
NspI	RCATGY	7 cut(s)	479, 1241, 1399, 2254, 2469, 2475, 2680
NspV	TTCGAA	1 cut(s)	90
PaeR7I	CTCGAG	1 cut(s)	1169
PagI	TCATGA	1 cut(s)	2134
PasI	CCCWGGG	1 cut(s)	393
PceI	AGGCCT	1 cut(s)	3370
PciI	ACATGT	1 cut(s)	2250
PciSI	GCTCTTC	2 cut(s)	571, 2250
PctI	GAATGC	7 cut(s)	194, 761, 1598, 1768, 2004, 2157, 3002
PdmI	GAANNNNTTC	1 cut(s)	3016
PfeI	GAWTC	4 cut(s)	603, 1525, 1962, 1988
PflMI	CCANNNNNTGG	1 cut(s)	1391
PfoI	TCCNGGA	1 cut(s)	1108
PleI	GAGTC	9 cut(s)	224, 290, 411, 1085, 1429, 2104, 2989, 3231, 3459
PmaCI	CACGTG	1 cut(s)	2588
PmlI	CACGTG	1 cut(s)	2588
PpsI	GAGTC	9 cut(s)	224, 290, 411, 1085, 1429, 2104, 2989, 3231, 3459
Ppu21I	YACGTR	1 cut(s)	2588
PpuMI	RGGWCCY	1 cut(s)	3245
PscI	ACATGT	1 cut(s)	2250
Psp124BI	GAGCTC	2 cut(s)	256, 2898
Psp5II	RGGWCCY	1 cut(s)	3245
Psp6I	CCWGG	8 cut(s)	392, 818, 1004, 1108, 1690, 2491, 3078, 3186
PspCI	CACGTG	1 cut(s)	2588
PspGI	CCWGG	8 cut(s)	392, 818, 1004, 1108, 1690, 2491, 3078, 3186
PspN4I	GGNNCC	9 cut(s)	649, 1159, 1552, 2279, 2497, 2540, 3077, 3163, 3356
PspPI	GGNCC	7 cut(s)	61, 331, 396, 919, 1876, 3245, 3354
PspPPI	RGGWCCY	1 cut(s)	3245
PspXI	VCTCGAGB	1 cut(s)	1169
PstI	CTGCAG	4 cut(s)	1429, 1936, 2580, 3376
PstNI	CAGNNNCTG	1 cut(s)	2482
PsuI	RGATCY	3 cut(s)	1081, 1366, 2724
PvuII	CAGCTG	4 cut(s)	1403, 1430, 1937, 3293
RsaI	GTAC	5 cut(s)	598, 829, 979, 1307, 3219
RsaNI	GTAC	5 cut(s)	597, 828, 978, 1306, 3218
RseI	CAYNNNNRTG	8 cut(s)	69, 778, 1204, 1263, 2470, 2476, 3050, 3170
SacI	GAGCTC	2 cut(s)	256, 2898
SapI	GCTCTTC	2 cut(s)	571, 2250
SaqAI	TTAA	6 cut(s)	258, 1121, 1604, 2127, 2273, 2381
Sau96I	GGNCC	7 cut(s)	61, 331, 396, 919, 1876, 3245, 3354
SchI	GAGTC	9 cut(s)	224, 290, 411, 1085, 1430, 2105, 2990, 3232, 3460
ScrFI	CCNGG	9 cut(s)	371, 394, 820, 1006, 1110, 1692, 2493, 3080, 3188
SduI	GDGCHC	6 cut(s)	256, 1013, 1162, 1579, 2898, 3040
SfaNI	GCATC	6 cut(s)	630, 815, 1762, 2004, 2876, 3381
SfcI	CTRYAG	7 cut(s)	789, 1425, 1932, 1957, 2510, 2576, 3372
SfiI	GGCCNNNNNGGCC	1 cut(s)	3352
Sfr274I	CTCGAG	1 cut(s)	1169
SfuI	TTCGAA	1 cut(s)	90
SinI	GGWCC	3 cut(s)	331, 919, 3245
SlaI	CTCGAG	1 cut(s)	1169
SmiMI	CAYNNNNRTG	8 cut(s)	69, 778, 1204, 1263, 2470, 2476, 3050, 3170
SmlI	CTYRAG	7 cut(s)	257, 563, 1169, 2093, 2624, 2897, 3285
SmoI	CTYRAG	7 cut(s)	257, 563, 1169, 2093, 2624, 2897, 3285
SseBI	AGGCCT	1 cut(s)	3370
SsiI	CCGC	7 cut(s)	137, 624, 1021, 1647, 2376, 2629, 3128
SstI	GAGCTC	2 cut(s)	256, 2898
StuI	AGGCCT	1 cut(s)	3370
StyD4I	CCNGG	9 cut(s)	369, 392, 818, 1004, 1108, 1690, 2491, 3078, 3186
StyI	CCWWGG	5 cut(s)	126, 905, 1040, 1385, 2534
TaiI	ACGT	1 cut(s)	2590
TaqI	TCGA	8 cut(s)	90, 484, 655, 1170, 1741, 2080, 2783, 3472
TaqII	GACCGA	1 cut(s)	1629
TatI	WGTACW	2 cut(s)	827, 1305
TauI	GCSGC	3 cut(s)	140, 1649, 2632
TfiI	GAWTC	4 cut(s)	603, 1525, 1962, 1988
Tru1I	TTAA	6 cut(s)	258, 1121, 1604, 2127, 2273, 2381
Tru9I	TTAA	6 cut(s)	258, 1121, 1604, 2127, 2273, 2381
TscAI	CASTG	7 cut(s)	559, 798, 1702, 1908, 2311, 2483, 2863
TseFI	GTSAC	2 cut(s)	1175, 2852
Tsp45I	GTSAC	2 cut(s)	1175, 2852
TspGWI	ACGGA	5 cut(s)	26, 1733, 2822, 3235, 3323
TspRI	CASTG	7 cut(s)	559, 798, 1702, 1908, 2311, 2483, 2863
Van91I	CCANNNNNTGG	1 cut(s)	1391
Vha464I	CTTAAG	1 cut(s)	257
VneI	GTGCAC	1 cut(s)	1575
VpaK11BI	GGWCC	3 cut(s)	331, 919, 3245
XapI	RAATTY	4 cut(s)	1484, 2397, 2696, 3016
XbaI	TCTAGA	2 cut(s)	1768, 2074
XceI	RCATGY	7 cut(s)	479, 1241, 1399, 2254, 2469, 2475, 2680
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1604
XhoI	CTCGAG	1 cut(s)	1169
XmiI	GTMKAC	1 cut(s)	1089
XmnI	GAANNNNTTC	1 cut(s)	3016
Zsp2I	ATGCAT	2 cut(s)	1228, 3396

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.