Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0008819

Physical Location & Seq

Genomic Coordinates Forward (+)

19083757 .. 19093023

Gene Structure 9267 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g27860.t4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2028 bp

ATGGCTCTCCAGGCTTCAAATCATCCCTCGGGAACTTCCCGTCCAGGTACAAGTGATGCTTTGTTTAAGGAGCTATGGCATGCTTGTGCCGGCCCCCTTGTCACCCTGCCACGTGAAGGGGAGCGAGTTTACTACTTTCCACAGGGACACATGGAACAGCTGGAGGCGTCAATGCATCAGATTTCAGAGCAGCAAATGCCATCATTCAATCTGCCATCCAAAATTTTATGTAAAGTTGTTAATGTTCAGCTTCGGGCTGAACCCGACACCGATGAAGTTTATGCGCAAGTTACTCTGCTACCAGAAACTGATCAAAGCGAGGTAACAAGCCCAGATCCTCCTCTCCCAGAAACTCCACACTGTACAGTCCATTCATTTTGCAAGACACTTACTGCTTCTGACACAAGCACACATGGAGGATTCTCTGTCCTTCGGAGGCATGCTGATGATTGTCTGCCACCACTGGATATGTCTCAGCAGCCTCCATGGCAAGAACTAGTTGCAACTGATCTGCATGGAAATGAATGGCATTTTCGGCATATCTTTCGAGGGCAACCTAGGCGCCACTTACTCACAACTGGGTGGAGTGTTTTTGTTAGTTCCAAAAAATTAGTGGCTGGTGATGCGTTTATATTCTTAAGAGGTGAGACTGGGGAGCTGCGTGTTGGTGTCAGGAGACTCATGAGACAACCAAGCAATATGCCATCTTCTGTTATTTCTAGCCACAGTATGCATCTTGGGGTCCTAGCTACGGCATCTCATGCCATTGCAACTGGGACACTTTTTTCGGTCTTCTACAAACCAAGAACAAGTCAATCTGAGTTCCTTGTAAGTGTCAACAAGTACCTTGAAGCTCGCAGTCACAAACTCTCTGTCGGAATGAGGTTTAAAATGAGATTTGAGGGCGAAGAAGTTCCTGAAAGAAGGTTCAGCGGCACGATTGTTGGTGTTGGGGATAATACATCACCTGGATGGTCAAATTCTGAGTGGCGATCACTAAAGGTCCAATGGGATGAACCCTCATCTATACCGCGGCCAGATAGAGTCTCACCTTGGGAATTGGAGCCACTGGTAGCGACTACTCCACTAAACTTGCAACCTGCATTGAGAAACAAGCGGGCACGAGCTCCCGTCTTACCTTCTTCAACCCCAGATCTTTCTTCACTGGGTGAGTGGAAATCCCAAGCAGAATCTCCTTCGGCTTTCTCATATAATGACCCACAGCGTGGTCGAGACCTCTATCCGTCACCCAAGTATAGTTCTGCTTCAAAAGCTAATTCTCTTTGTTTTACGGGCAATAATTCTCTAGCTGCTGTTTCTGGGAATCCAATGCTTTGGTCCAATCGAGTTGAAGCTGTAACGGAGTCTTCTTCGCCTGTTATGAAAGATTCAGTGGAAAGGAGACAAAGCACTGGAAATGGCTATAGGCTCTTTGGAATTCAGTTGCTTGAGAACTCTAATATAGAAGAGACTTCACCCATGGTAGTGTCTGGAAAGCTGGGGGATGTTCAACAAATTTCTTCATTTGATGCTGAATCTGACCAACACTCAGAACCATCAAATGTCAACCGATCTGATCTTCCTTCAGGAAGTTGTGATGCTGAGAAATCTTCCCTCAGATCACCTCAGGAATCGCAAAGCAGGCAAATTCGGAGTTGCACAAAGGTTCATATGCAAGGGATTGCAGTAGGAAGAGCTGTAGATTTAACACGTTTTGAGGGATATGAGGACCTGCTTAAGAAACTGGAAGAGATGTTTGATATTGGAGGTGAGCTGAGTGGATCTACCAAGAAATGGCAAGTTGTCTACACTGATGATGAGGATGACATGATGATGGTTGGGGATGACCCATGGCATGAGTTCTGCAGCATGGTAAGGAAGATTTTCATCTATACAGCGGAGGAAGTGAAGAGGTTGTCACCTAAGATAAAACTTCCAGTAGGTGGAGAGGCTAAACAAGGCAAGCCAGATTCTGAAGCAGCTATTAACACGGAAGACGGGTCATCTATCGTGGGGCCGACATATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0007568 GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0009889 GO:0009890 GO:0009892 GO:0010033 GO:0010150 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0019219 GO:0019222 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032501 GO:0032502 GO:0042221 GO:0042802 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045892 GO:0045934 GO:0048366 GO:0048367 GO:0048519 GO:0048523 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0060255 GO:0065007 GO:0080090 GO:0090693 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

AUX_IAA Auxin_resp B3

Protein Analysis

676

Amino Acids

74.85

Weight (kDa)

5.87

Isoelectric Point (pI)

60.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B3	PF02362	76 - 176	6.7e-22	B3 DNA binding domain
BRWD_AD	PF25313	202 - 307	6.5e-09	BRWD/PHIP ancillary domain-like domain
ARF_AD	PF06507	225 - 307	9.2e-34	Auxin response factor ancillary domain
AUX_IAA	PF02309	493 - 537	4.1e-06	AUX/IAA family
AUX_IAA	PF02309	545 - 591	7.3e-06	AUX/IAA family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008819)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G59750 AT1G59750 AT1G59750 AT1G59750
fragaria_vesca	FvH4_5g27860 FvH4_5g27860 FvH4_5g27860 FvH4_5g27860 FvH4_5g27860
malus_domestica	MD08G1247700.v1.1
prunus_persica	Prupe.1G585200_v2.0.a1 Prupe.1G585200_v2.0.a1
pyrus_communis	pycom08g21460
rosa_chinensis	RchiOBHm_Chr7g0219771
rosa_laevigata	RLG00000002269
rosa_multiflora	Rmu_sc0005014.1_g000017
rosa_roxburghii	Rroxscaffold_3G00239870
rosa_rugosa	Rorug07G0187800 Rorug07G0187900
rosa_samantha	Rh7AG331600 Rh7BG321200 Rh7CG349000
rosa_wichuraiana	Rw7G027920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	285
Acc36I	ACCTGC	2 cut(s)	1108, 1740
AccB1I	GGYRCC	1 cut(s)	561
AccB7I	CCANNNNNTGG	3 cut(s)	1226, 1794, 1943
AccI	GTMKAC	1 cut(s)	1806
AccII	CGCG	1 cut(s)	1033
AciI	CCGC	5 cut(s)	933, 1031, 1033, 1117, 1898
AclWI	GGATC	2 cut(s)	329, 1789
AcoI	YGGCCR	1 cut(s)	1034
AcsI	RAATTY	5 cut(s)	222, 979, 1437, 1515, 1647
AcuI	CTGAAG	2 cut(s)	1569, 1995
AcvI	CACGTG	1 cut(s)	113
AcyI	GRCGYC	2 cut(s)	167, 562
AdeI	CACNNNGTG	2 cut(s)	1169, 1226
AfaI	GTAC	3 cut(s)	49, 364, 845
AfiI	CCNNNNNNNGG	5 cut(s)	116, 751, 1226, 1794, 1943
AflII	CTTAAG	2 cut(s)	637, 1736
AflIII	ACRYGT	1 cut(s)	1709
AgsI	TTSAA	7 cut(s)	18, 208, 851, 1146, 1269, 1352, 1511
AhlI	ACTAGT	1 cut(s)	496
AjnI	CCWGG	3 cut(s)	9, 43, 967
AloI	GAACNNNNNNTCC	2 cut(s)	25, 57
Alw21I	GWGCWC	1 cut(s)	1129
Alw26I	GTCTC	8 cut(s)	477, 641, 670, 679, 1051, 1227, 1396, 1463
AlwI	GGATC	2 cut(s)	329, 1789
AlwNI	CAGNNNCTG	2 cut(s)	308, 1973
Ama87I	CYCGRG	1 cut(s)	28
AoxI	GGCC	3 cut(s)	91, 1034, 2015
ApeKI	GCWGC	6 cut(s)	190, 478, 658, 1310, 1866, 1979
ApoI	RAATTY	5 cut(s)	222, 979, 1437, 1515, 1647
ArsI	GACNNNNNNTTYG	4 cut(s)	769, 801, 858, 890
Asp700I	GAANNNNTTC	2 cut(s)	912, 1883
AspA2I	CCTAGG	1 cut(s)	557
AspLEI	GCGC	2 cut(s)	286, 564
AspS9I	GGNCC	6 cut(s)	92, 742, 1003, 1338, 1729, 2015
AvaI	CYCGRG	1 cut(s)	28
AvaII	GGWCC	4 cut(s)	742, 1003, 1338, 1729
AvrII	CCTAGG	1 cut(s)	557
AxyI	CCTNAGG	1 cut(s)	1626
BaeGI	GKGCMC	1 cut(s)	1123
BanI	GGYRCC	1 cut(s)	561
BanII	GRGCYC	1 cut(s)	1129
BauI	CACGAG	1 cut(s)	1122
BbrPI	CACGTG	1 cut(s)	113
BbsI	GAAGAC	3 cut(s)	784, 1359, 2001
Bbv12I	GWGCWC	1 cut(s)	1129
BbvI	GCAGC	6 cut(s)	202, 490, 645, 1297, 1878, 1991
BccI	CCATC	6 cut(s)	208, 223, 712, 966, 1564, 1828
BceAI	ACGGC	1 cut(s)	768
BcgI	CGANNNNNNTGC	2 cut(s)	527, 561
BciT130I	CCWGG	3 cut(s)	11, 45, 969
BclI	TGATCA	1 cut(s)	310
BcoDI	GTCTC	8 cut(s)	477, 641, 670, 679, 1051, 1227, 1396, 1463
BcuI	ACTAGT	1 cut(s)	496
BfaI	CTAG	5 cut(s)	497, 558, 720, 746, 1307
BfmI	CTRYAG	3 cut(s)	1423, 1698, 1864
BfoI	RGCGCY	1 cut(s)	565
BfrI	CTTAAG	2 cut(s)	637, 1736
BfuAI	ACCTGC	2 cut(s)	1108, 1740
BglI	GCCNNNNNGGC	1 cut(s)	487
BglII	AGATCT	1 cut(s)	1153
BisI	GCNGC	8 cut(s)	191, 479, 659, 934, 1034, 1311, 1867, 1980
BlnI	CCTAGG	1 cut(s)	557
BlsI	GCNGC	8 cut(s)	192, 480, 660, 935, 1035, 1312, 1868, 1981
Bme1390I	CCNGG	3 cut(s)	11, 45, 969
Bme18I	GGWCC	4 cut(s)	742, 1003, 1338, 1729
BmeT110I	CYCGRG	1 cut(s)	28
BmgT120I	GGNCC	6 cut(s)	92, 742, 1003, 1338, 1729, 2015
BmiI	GGNNCC	5 cut(s)	94, 563, 743, 1065, 2016
BmrFI	CCNGG	3 cut(s)	11, 45, 969
BmrI	ACTGGG	4 cut(s)	588, 660, 783, 1175
BmsI	GCATC	7 cut(s)	46, 184, 613, 742, 764, 1519, 1588
BmuI	ACTGGG	4 cut(s)	588, 660, 783, 1175
BpiI	GAAGAC	3 cut(s)	784, 1359, 2001
BpmI	CTGGAG	1 cut(s)	182
BpuEI	CTTGAG	1 cut(s)	1469
BsaAI	YACGTR	1 cut(s)	113
BsaBI	GATNNNNATC	1 cut(s)	1886
BsaHI	GRCGYC	2 cut(s)	167, 562
BsaI	GGTCTC	1 cut(s)	1227
BsaJI	CCNNGG	7 cut(s)	27, 485, 557, 1031, 1052, 1479, 1850
Bsc4I	CCNNNNNNNGG	5 cut(s)	116, 751, 1226, 1794, 1943
Bse118I	RCCGGY	1 cut(s)	89
Bse1I	ACTGG	9 cut(s)	468, 583, 655, 778, 1074, 1170, 1417, 1749, 1937
Bse21I	CCTNAGG	1 cut(s)	1626
Bse3DI	GCAATG	1 cut(s)	765
Bse8I	GATNNNNATC	1 cut(s)	1886
BseBI	CCWGG	3 cut(s)	11, 45, 969
BseDI	CCNNGG	7 cut(s)	27, 485, 557, 1031, 1052, 1479, 1850
BseGI	GGATG	7 cut(s)	22, 215, 977, 1018, 1510, 1828, 1849
BseJI	GATNNNNATC	1 cut(s)	1886
BseLI	CCNNNNNNNGG	5 cut(s)	116, 751, 1226, 1794, 1943
BseMI	GCAATG	1 cut(s)	765
BseMII	CTCAG	8 cut(s)	488, 810, 975, 1563, 1593, 1630, 1640, 1766
BseNI	ACTGG	9 cut(s)	468, 583, 655, 778, 1074, 1170, 1417, 1749, 1937
BseRI	GAGGAG	1 cut(s)	330
BseSI	GKGCMC	1 cut(s)	1123
BseXI	GCAGC	6 cut(s)	202, 490, 645, 1297, 1878, 1991
BseYI	CCCAGC	1 cut(s)	1498
Bsh1236I	CGCG	1 cut(s)	1033
BshFI	GGCC	3 cut(s)	93, 1036, 2017
BshNI	GGYRCC	1 cut(s)	561
BsiHKAI	GWGCWC	1 cut(s)	1129
BsiHKCI	CYCGRG	1 cut(s)	28
BsiSI	CCGG	1 cut(s)	90
BslFI	GGGAC	2 cut(s)	159, 790
BslI	CCNNNNNNNGG	5 cut(s)	116, 751, 1226, 1794, 1943
BsmAI	GTCTC	8 cut(s)	477, 641, 670, 679, 1051, 1227, 1396, 1463
BsmFI	GGGAC	2 cut(s)	159, 790
BsnI	GGCC	3 cut(s)	93, 1036, 2017
Bso31I	GGTCTC	1 cut(s)	1227
BsoBI	CYCGRG	1 cut(s)	28
Bsp1286I	GDGCHC	2 cut(s)	1123, 1129
Bsp1407I	TGTACA	1 cut(s)	362
Bsp143I	GATC	9 cut(s)	310, 334, 508, 992, 1153, 1571, 1576, 1619, 1781
Bsp19I	CCATGG	3 cut(s)	485, 1479, 1850
BspACI	CCGC	5 cut(s)	933, 1031, 1033, 1117, 1898
BspANI	GGCC	3 cut(s)	93, 1036, 2017
BspCNI	CTCAG	8 cut(s)	487, 811, 976, 1562, 1594, 1629, 1639, 1767
BspFNI	CGCG	1 cut(s)	1033
BspHI	TCATGA	1 cut(s)	681
BspLI	GGNNCC	5 cut(s)	94, 563, 743, 1065, 2016
BspMAI	CTGCAG	1 cut(s)	1868
BspMI	ACCTGC	2 cut(s)	1108, 1740
BspPI	GGATC	2 cut(s)	329, 1789
BspQI	GCTCTTC	1 cut(s)	1687
BspT107I	GGYRCC	1 cut(s)	561
BspTI	CTTAAG	2 cut(s)	637, 1736
BspTNI	GGTCTC	1 cut(s)	1227
BsrDI	GCAATG	1 cut(s)	765
BsrFI	RCCGGY	1 cut(s)	89
BsrGI	TGTACA	1 cut(s)	362
BsrI	ACTGG	9 cut(s)	468, 583, 655, 778, 1074, 1170, 1417, 1749, 1937
BssAI	RCCGGY	1 cut(s)	89
BssECI	CCNNGG	7 cut(s)	27, 485, 557, 1031, 1052, 1479, 1850
BssMI	GATC	9 cut(s)	310, 334, 508, 992, 1153, 1571, 1576, 1619, 1781
BssNI	GRCGYC	2 cut(s)	167, 562
BssSI	CACGAG	1 cut(s)	1122
BssT1I	CCWWGG	5 cut(s)	485, 557, 1052, 1479, 1850
Bst2BI	CACGAG	1 cut(s)	1122
Bst2UI	CCWGG	3 cut(s)	11, 45, 969
Bst4CI	ACNGT	3 cut(s)	362, 367, 728
Bst6I	CTCTTC	4 cut(s)	1461, 1687, 1743, 1904
BstACI	GRCGYC	2 cut(s)	167, 562
BstAFI	CTTAAG	2 cut(s)	637, 1736
BstAPI	GCANNNNNTGC	2 cut(s)	196, 761
BstAUI	TGTACA	1 cut(s)	362
BstBAI	YACGTR	1 cut(s)	113
BstC8I	GCNNGC	7 cut(s)	81, 91, 441, 856, 1119, 1643, 1964
BstDEI	CTNAG	9 cut(s)	474, 819, 984, 1549, 1602, 1616, 1626, 1775, 1923
BstDSI	CCRYGG	4 cut(s)	485, 1031, 1479, 1850
BstF5I	GGATG	7 cut(s)	22, 215, 977, 1018, 1510, 1828, 1849
BstFNI	CGCG	1 cut(s)	1033
BstH2I	RGCGCY	1 cut(s)	565
BstHHI	GCGC	2 cut(s)	286, 564
BstKTI	GATC	9 cut(s)	313, 337, 511, 995, 1156, 1574, 1579, 1622, 1784
BstMAI	GTCTC	8 cut(s)	477, 641, 670, 679, 1051, 1227, 1396, 1463
BstMBI	GATC	9 cut(s)	310, 334, 508, 992, 1153, 1571, 1576, 1619, 1781
BstMWI	GCNNNNNNNGC	9 cut(s)	11, 196, 487, 535, 559, 623, 761, 1271, 1642
BstNI	CCWGG	3 cut(s)	11, 45, 969
BstNSI	RCATGY	2 cut(s)	83, 443
BstSCI	CCNGG	3 cut(s)	9, 43, 967
BstSFI	CTRYAG	3 cut(s)	1423, 1698, 1864
BstSLI	GKGCMC	1 cut(s)	1123
BstUI	CGCG	1 cut(s)	1033
BstV1I	GCAGC	6 cut(s)	202, 490, 645, 1297, 1878, 1991
BstV2I	GAAGAC	3 cut(s)	784, 1359, 2001
BstX2I	RGATCY	3 cut(s)	334, 1153, 1781
BstXI	CCANNNNNNTGG	1 cut(s)	1335
BstYI	RGATCY	3 cut(s)	334, 1153, 1781
Bsu36I	CCTNAGG	1 cut(s)	1626
BsuRI	GGCC	3 cut(s)	93, 1036, 2017
BtgI	CCRYGG	4 cut(s)	485, 1031, 1479, 1850
BtsCI	GGATG	7 cut(s)	22, 215, 977, 1018, 1510, 1828, 1849
BtsIMutI	CAGTG	7 cut(s)	358, 461, 1067, 1163, 1398, 1410, 1809
BveI	ACCTGC	2 cut(s)	1108, 1740
Cac8I	GCNNGC	7 cut(s)	81, 91, 441, 856, 1119, 1643, 1964
CaiI	CAGNNNCTG	2 cut(s)	308, 1973
CciI	TCATGA	1 cut(s)	681
CfoI	GCGC	2 cut(s)	286, 564
Cfr10I	RCCGGY	1 cut(s)	89
Cfr13I	GGNCC	6 cut(s)	92, 742, 1003, 1338, 1729, 2015
Cfr42I	CCGCGG	1 cut(s)	1034
CseI	GACGC	1 cut(s)	156
Csp6I	GTAC	3 cut(s)	48, 363, 844
CspCI	CAANNNNNGTGG	2 cut(s)	1074, 1109
CviQI	GTAC	3 cut(s)	48, 363, 844
DdeI	CTNAG	9 cut(s)	474, 819, 984, 1549, 1602, 1616, 1626, 1775, 1923
DinI	GGCGCC	1 cut(s)	563
DpnI	GATC	9 cut(s)	312, 336, 510, 994, 1155, 1573, 1578, 1621, 1783
DpnII	GATC	9 cut(s)	310, 334, 508, 992, 1153, 1571, 1576, 1619, 1781
DraI	TTTAAA	1 cut(s)	889
DraIII	CACNNNGTG	2 cut(s)	1169, 1226
EaeI	YGGCCR	1 cut(s)	1034
Eam1104I	CTCTTC	4 cut(s)	1461, 1687, 1743, 1904
EarI	CTCTTC	4 cut(s)	1461, 1687, 1743, 1904
Ecl136II	GAGCTC	1 cut(s)	1127
Eco130I	CCWWGG	5 cut(s)	485, 557, 1052, 1479, 1850
Eco24I	GRGCYC	1 cut(s)	1129
Eco31I	GGTCTC	1 cut(s)	1227
Eco47I	GGWCC	4 cut(s)	742, 1003, 1338, 1729
Eco53kI	GAGCTC	1 cut(s)	1127
Eco57I	CTGAAG	2 cut(s)	1569, 1995
Eco72I	CACGTG	1 cut(s)	113
Eco81I	CCTNAGG	1 cut(s)	1626
Eco88I	CYCGRG	1 cut(s)	28
EcoICRI	GAGCTC	1 cut(s)	1127
EcoO109I	RGGNCCY	2 cut(s)	742, 1729
EcoRI	GAATTC	1 cut(s)	1437
EcoRII	CCWGG	3 cut(s)	9, 43, 967
EcoT14I	CCWWGG	5 cut(s)	485, 557, 1052, 1479, 1850
EcoT22I	ATGCAT	2 cut(s)	177, 735
EcoT38I	GRGCYC	1 cut(s)	1129
EgeI	GGCGCC	1 cut(s)	563
EheI	GGCGCC	1 cut(s)	563
ErhI	CCWWGG	5 cut(s)	485, 557, 1052, 1479, 1850
FalI	AAGNNNNNCTT	2 cut(s)	43, 75
FaqI	GGGAC	2 cut(s)	159, 790
FauI	CCCGC	1 cut(s)	1110
FauNDI	CATATG	1 cut(s)	1671
FbaI	TGATCA	1 cut(s)	310
FblI	GTMKAC	1 cut(s)	1806
Fnu4HI	GCNGC	8 cut(s)	191, 479, 659, 934, 1034, 1311, 1867, 1980
FokI	GGATG	7 cut(s)	9, 202, 984, 1025, 1517, 1835, 1856
FriOI	GRGCYC	1 cut(s)	1129
Fsp4HI	GCNGC	8 cut(s)	191, 479, 659, 934, 1034, 1311, 1867, 1980
FspBI	CTAG	5 cut(s)	497, 558, 720, 746, 1307
FspI	TGCGCA	1 cut(s)	285
GlaI	GCGC	2 cut(s)	285, 563
GluI	GCNGC	8 cut(s)	191, 479, 659, 934, 1034, 1311, 1867, 1980
GsaI	CCCAGC	1 cut(s)	1502
GsuI	CTGGAG	1 cut(s)	182
HaeII	RGCGCY	1 cut(s)	565
HaeIII	GGCC	3 cut(s)	93, 1036, 2017
HapII	CCGG	1 cut(s)	90
HgaI	GACGC	1 cut(s)	156
HhaI	GCGC	2 cut(s)	286, 564
Hin1I	GRCGYC	2 cut(s)	167, 562
Hin6I	GCGC	2 cut(s)	284, 562
HinP1I	GCGC	2 cut(s)	284, 562
HincII	GTYRAC	2 cut(s)	838, 1567
HindII	GTYRAC	2 cut(s)	838, 1567
HpaII	CCGG	1 cut(s)	90
Hpy166II	GTNNAC	4 cut(s)	130, 838, 1567, 1807
Hpy188III	TCNNGA	8 cut(s)	30, 673, 682, 917, 1232, 1491, 1587, 1628
Hpy8I	GTNNAC	4 cut(s)	130, 838, 1567, 1807
HpyAV	CCTTC	6 cut(s)	110, 440, 918, 1149, 1206, 1593
HpyCH4III	ACNGT	3 cut(s)	362, 367, 728
HpyCH4IV	ACGT	2 cut(s)	112, 1711
HpyF10VI	GCNNNNNNNGC	9 cut(s)	11, 196, 487, 535, 559, 623, 761, 1271, 1642
HpyF3I	CTNAG	9 cut(s)	474, 819, 984, 1549, 1602, 1616, 1626, 1775, 1923
HpySE526I	ACGT	2 cut(s)	112, 1711
Hsp92I	GRCGYC	2 cut(s)	167, 562
HspAI	GCGC	2 cut(s)	284, 562
KasI	GGCGCC	1 cut(s)	561
KroI	GCCGGC	1 cut(s)	89
KroNI	GCCGGC	1 cut(s)	91
Ksp22I	TGATCA	1 cut(s)	310
KspI	CCGCGG	1 cut(s)	1034
Kzo9I	GATC	9 cut(s)	310, 334, 508, 992, 1153, 1571, 1576, 1619, 1781
LguI	GCTCTTC	1 cut(s)	1687
LmnI	GCTCC	5 cut(s)	70, 121, 655, 1063, 1132
Lsp1109I	GCAGC	6 cut(s)	202, 490, 645, 1297, 1878, 1991
LweI	GCATC	7 cut(s)	46, 184, 613, 742, 764, 1519, 1588
MaeI	CTAG	5 cut(s)	497, 558, 720, 746, 1307
MaeII	ACGT	2 cut(s)	112, 1711
MaeIII	GTNAC	7 cut(s)	100, 289, 322, 860, 1245, 1357, 1917
MalI	GATC	9 cut(s)	312, 336, 510, 994, 1155, 1573, 1578, 1621, 1783
MboI	GATC	9 cut(s)	310, 334, 508, 992, 1153, 1571, 1576, 1619, 1781
MflI	RGATCY	3 cut(s)	334, 1153, 1781
MhlI	GDGCHC	2 cut(s)	1123, 1129
MluCI	AATT	9 cut(s)	222, 608, 979, 1058, 1276, 1300, 1437, 1515, 1647
Mly113I	GGCGCC	1 cut(s)	562
MlyI	GAGTC	3 cut(s)	672, 1053, 1373
MmeI	TCCRAC	1 cut(s)	856
Mph1103I	ATGCAT	2 cut(s)	177, 735
MroNI	GCCGGC	1 cut(s)	89
MroXI	GAANNNNTTC	2 cut(s)	912, 1883
MseI	TTAA	7 cut(s)	66, 240, 638, 888, 1706, 1737, 1986
MslI	CAYNNNNRTG	6 cut(s)	84, 444, 519, 970, 1484, 1832
MspA1I	CMGCKG	4 cut(s)	160, 933, 1033, 1898
MspCI	CTTAAG	2 cut(s)	637, 1736
MspI	CCGG	1 cut(s)	90
MspR9I	CCNGG	3 cut(s)	11, 45, 969
MvaI	CCWGG	3 cut(s)	11, 45, 969
MvnI	CGCG	1 cut(s)	1033
MwoI	GCNNNNNNNGC	9 cut(s)	11, 196, 487, 535, 559, 623, 761, 1271, 1642
NaeI	GCCGGC	1 cut(s)	91
NarI	GGCGCC	1 cut(s)	562
NcoI	CCATGG	3 cut(s)	485, 1479, 1850
NdeI	CATATG	1 cut(s)	1671
NdeII	GATC	9 cut(s)	310, 334, 508, 992, 1153, 1571, 1576, 1619, 1781
NgoMIV	GCCGGC	1 cut(s)	89
NlaIV	GGNNCC	5 cut(s)	94, 563, 743, 1065, 2016
NmuCI	GTSAC	4 cut(s)	100, 860, 1245, 1917
NsbI	TGCGCA	1 cut(s)	285
NsiI	ATGCAT	2 cut(s)	177, 735
NspI	RCATGY	2 cut(s)	83, 443
PaeI	GCATGC	2 cut(s)	83, 443
PagI	TCATGA	1 cut(s)	681
PciSI	GCTCTTC	1 cut(s)	1687
PdiI	GCCGGC	1 cut(s)	91
PdmI	GAANNNNTTC	2 cut(s)	912, 1883
PfeI	GAWTC	7 cut(s)	420, 1190, 1324, 1388, 1535, 1631, 1970
PflMI	CCANNNNNTGG	3 cut(s)	1226, 1794, 1943
PkrI	GCNGC	8 cut(s)	192, 480, 660, 935, 1035, 1312, 1868, 1981
PleI	GAGTC	3 cut(s)	672, 1052, 1372
PluTI	GGCGCC	1 cut(s)	565
PmaCI	CACGTG	1 cut(s)	113
PmlI	CACGTG	1 cut(s)	113
PpsI	GAGTC	3 cut(s)	672, 1052, 1372
Ppu21I	YACGTR	1 cut(s)	113
PpuMI	RGGWCCY	2 cut(s)	742, 1729
Psp124BI	GAGCTC	1 cut(s)	1129
Psp5II	RGGWCCY	2 cut(s)	742, 1729
Psp6I	CCWGG	3 cut(s)	9, 43, 967
PspCI	CACGTG	1 cut(s)	113
PspFI	CCCAGC	1 cut(s)	1498
PspGI	CCWGG	3 cut(s)	9, 43, 967
PspN4I	GGNNCC	5 cut(s)	94, 563, 743, 1065, 2016
PspPI	GGNCC	6 cut(s)	92, 742, 1003, 1338, 1729, 2015
PspPPI	RGGWCCY	2 cut(s)	742, 1729
PstI	CTGCAG	1 cut(s)	1868
PstNI	CAGNNNCTG	2 cut(s)	308, 1973
PsuI	RGATCY	3 cut(s)	334, 1153, 1781
PvuII	CAGCTG	1 cut(s)	160
RsaI	GTAC	3 cut(s)	49, 364, 845
RsaNI	GTAC	3 cut(s)	48, 363, 844
RseI	CAYNNNNRTG	6 cut(s)	84, 444, 519, 970, 1484, 1832
SacI	GAGCTC	1 cut(s)	1129
SacII	CCGCGG	1 cut(s)	1034
SapI	GCTCTTC	1 cut(s)	1687
SaqAI	TTAA	7 cut(s)	66, 240, 638, 888, 1706, 1737, 1986
SatI	GCNGC	8 cut(s)	191, 479, 659, 934, 1034, 1311, 1867, 1980
Sau3AI	GATC	9 cut(s)	310, 334, 508, 992, 1153, 1571, 1576, 1619, 1781
Sau96I	GGNCC	6 cut(s)	92, 742, 1003, 1338, 1729, 2015
SchI	GAGTC	3 cut(s)	672, 1053, 1373
ScrFI	CCNGG	3 cut(s)	11, 45, 969
SduI	GDGCHC	2 cut(s)	1123, 1129
SfaNI	GCATC	7 cut(s)	46, 184, 613, 742, 764, 1519, 1588
SfcI	CTRYAG	3 cut(s)	1423, 1698, 1864
SfoI	GGCGCC	1 cut(s)	563
Sfr303I	CCGCGG	1 cut(s)	1034
SgrBI	CCGCGG	1 cut(s)	1034
SinI	GGWCC	4 cut(s)	742, 1003, 1338, 1729
SmiMI	CAYNNNNRTG	6 cut(s)	84, 444, 519, 970, 1484, 1832
SmlI	CTYRAG	3 cut(s)	637, 1448, 1736
SmoI	CTYRAG	3 cut(s)	637, 1448, 1736
SpeI	ACTAGT	1 cut(s)	496
SphI	GCATGC	2 cut(s)	83, 443
Sse9I	AATT	9 cut(s)	222, 608, 979, 1058, 1276, 1300, 1437, 1515, 1647
SsiI	CCGC	5 cut(s)	933, 1031, 1033, 1117, 1898
SspDI	GGCGCC	1 cut(s)	561
SspMI	CTAG	5 cut(s)	497, 558, 720, 746, 1307
SstI	GAGCTC	1 cut(s)	1129
StyD4I	CCNGG	3 cut(s)	9, 43, 967
StyI	CCWWGG	5 cut(s)	485, 557, 1052, 1479, 1850
TaaI	ACNGT	3 cut(s)	362, 367, 728
TaiI	ACGT	2 cut(s)	115, 1714
TaqI	TCGA	3 cut(s)	547, 1231, 1345
TaqII	GACCGA	1 cut(s)	778
TasI	AATT	9 cut(s)	222, 608, 979, 1058, 1276, 1300, 1437, 1515, 1647
TatI	WGTACW	1 cut(s)	362
TauI	GCSGC	2 cut(s)	936, 1036
TfiI	GAWTC	7 cut(s)	420, 1190, 1324, 1388, 1535, 1631, 1970
Tru1I	TTAA	7 cut(s)	66, 240, 638, 888, 1706, 1737, 1986
Tru9I	TTAA	7 cut(s)	66, 240, 638, 888, 1706, 1737, 1986
TscAI	CASTG	7 cut(s)	365, 468, 1074, 1170, 1398, 1417, 1816
TseFI	GTSAC	4 cut(s)	100, 860, 1245, 1917
TseI	GCWGC	6 cut(s)	190, 478, 658, 1310, 1866, 1979
Tsp45I	GTSAC	4 cut(s)	100, 860, 1245, 1917
TspDTI	ATGAA	8 cut(s)	288, 363, 537, 1029, 1397, 1512, 1658, 1876
TspGWI	ACGGA	3 cut(s)	1233, 1376, 2006
TspRI	CASTG	7 cut(s)	365, 468, 1074, 1170, 1398, 1417, 1816
Van91I	CCANNNNNTGG	3 cut(s)	1226, 1794, 1943
Vha464I	CTTAAG	2 cut(s)	637, 1736
VpaK11BI	GGWCC	4 cut(s)	742, 1003, 1338, 1729
XapI	RAATTY	5 cut(s)	222, 979, 1437, 1515, 1647
XceI	RCATGY	2 cut(s)	83, 443
XcmI	CCANNNNNNNNNTGG	1 cut(s)	610
XmaJI	CCTAGG	1 cut(s)	557
XmiI	GTMKAC	1 cut(s)	1806
XmnI	GAANNNNTTC	2 cut(s)	912, 1883
XspI	CTAG	5 cut(s)	497, 558, 720, 746, 1307
Zsp2I	ATGCAT	2 cut(s)	177, 735

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.