Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0008819

Physical Location & Seq

Genomic Coordinates Reverse (-)

15881021 .. 15882898

Gene Structure 1878 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0187900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1455 bp

ATGGCTCCCTCGTCTTCTTCCCCTTCCTCCAAATCCCCACCTCCCCCAACAACAACCCACTTCACTCCTATTCAAGAAGAAGATGGAAATGAGAGTACTAGTACTACCACCCCTAACAAAGCTACTCCCAAGCACCACAACTCTACACCTCTCCACTATTCTCACAAGCACGGCAAGCGACACTGTAAGAAGCGCTCGGAGATATCCACCGGTTCGTCGTCGGCCACTCGCGAGGAAGAAGACGACGACGACATGTCGGTGAACTGCAACAAGTGTCGTCCAAACGCTCGAGAAAAGATCTCGGTGGTGCCCTTGGACAACAACAACGGGTTCAATCGCAAGAACGGCTCGTCGTCGTCCGTGTTCATGGCCAGCCCAAACGGCATTCTGAAGTCGATTCTCTCGTCGTTCACCCGGAAGAGCCCGAAATTACCGATGGACCCTTACGCGGCCGCGAGGGAGGAGAAGTGGAAGGTCGCGGTGGCGGAGCTCTCGCAGAAGCTGATTCAGACGACGAGGAAAAAAGACGAGGCGCTTCTAGAAGCTTCGAGGCTGAAATACTCGATGGCGGAGCTGGAGAAGAAGCTGAACAAGCTCGAAGTCTACTGCCATGGATTGAAGTCCGGGCTTGAAGAATGCAGCAGCGGCAATTCGCCGTACCAGTTGGGATCAAAGCCTCAAAATAAACGACACGGCTTCACCGGGCTCAACGACAACAACAAAGCCGTCGTGGAGCATTTCTTGGTCGCCGTCTCCGAAGCCCGGACCTCGGTCCGGCTCTTAAGCCGGTCGCTGACGATGCAGCTCAGGCACATGGCGGGAAGCAAAGTATACGACAAGATCACAGCTCTTCTTCAGCCGTACGACATCAAGGTCTCGTTGTCCAAGAACCCAAGAAGCTTGCTTTTCTACTTGGAAGCTCTGCTGAACAAGACTTTCTTCGACGAGTTCGAATCGCCCGGGTTCTGCAAAAACTCGGCCAACCACATCCTGAACCCGGTCGAGCGGTGCGAGGCGAGCTACGCGTCGTTTGAGCTGCTCCGGGGGCTGACGTGGGACGAGGTTTTGATCAAGGGGACCAGGCATTTCAGCGAAGAGTTCAGCAGGTTTTGCGATAGGAAAATGAGTGAGATAGTGGCGATGTTGGGCTGGAATCGGGCCTGGCCCGAACCGCTTTTGCAGGCCTTCTTTGGGGCCTCCAAGAGTGTGTGGCTGGTGCATCTTCTGGCCACGTCGGTCCACCCGAGCTTGCCGGTTTTCCGGGTCGAGAGTGGGGTCGGGTTTGACCCGGTTTATATGGAGGATATGGGCGGAGACAAGGCGAGGAAGTTGGTACCTTCTGTGGTTCGGATCATGGTGGCGCCGGGGTTTTATGTTTATGGGAGTGTGGTCAAGTGCAAGGTGCTTTGCAGGTACAATAGCAATAGTAAGGGTTTGACCCATTCGTCACCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0007568 GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0009889 GO:0009890 GO:0009892 GO:0010033 GO:0010150 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0019219 GO:0019222 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032501 GO:0032502 GO:0042221 GO:0042802 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045892 GO:0045934 GO:0048366 GO:0048367 GO:0048519 GO:0048523 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0060255 GO:0065007 GO:0080090 GO:0090693 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

AUX_IAA Auxin_resp B3

Protein Analysis

484

Amino Acids

53.97

Weight (kDa)

9.28

Isoelectric Point (pI)

56.97

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008819)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G59750 AT1G59750 AT1G59750 AT1G59750
fragaria_vesca	FvH4_5g27860 FvH4_5g27860 FvH4_5g27860 FvH4_5g27860 FvH4_5g27860
malus_domestica	MD08G1247700.v1.1
prunus_persica	Prupe.1G585200_v2.0.a1 Prupe.1G585200_v2.0.a1
pyrus_communis	pycom08g21460
rosa_chinensis	RchiOBHm_Chr7g0219771
rosa_laevigata	RLG00000002269
rosa_multiflora	Rmu_sc0005014.1_g000017
rosa_roxburghii	Rroxscaffold_3G00239870
rosa_rugosa	Rorug07G0187800 Rorug07G0187900
rosa_samantha	Rh7AG331600 Rh7BG321200 Rh7CG349000
rosa_wichuraiana	Rw7G027920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	872, 1444
Acc36I	ACCTGC	2 cut(s)	1095, 1401
Acc65I	GGTACC	1 cut(s)	1333
AccB1I	GGYRCC	3 cut(s)	307, 1333, 1360
AccBSI	CCGCTC	1 cut(s)	1006
AccI	GTMKAC	2 cut(s)	603, 831
AccII	CGCG	5 cut(s)	231, 449, 455, 479, 1025
AclWI	GGATC	2 cut(s)	676, 1358
AcoI	YGGCCR	5 cut(s)	222, 369, 450, 978, 1227
AcuI	CTGAAG	2 cut(s)	410, 839
AcyI	GRCGYC	1 cut(s)	1361
AfaI	GTAC	6 cut(s)	97, 103, 659, 863, 1335, 1415
AfeI	AGCGCT	1 cut(s)	194
AfiI	CCNNNNNNNGG	6 cut(s)	448, 762, 769, 774, 997, 1191
AflII	CTTAAG	1 cut(s)	781
AflIII	ACRYGT	2 cut(s)	252, 1023
AgeI	ACCGGT	1 cut(s)	209
AgsI	TTSAA	4 cut(s)	74, 334, 619, 632
AhdI	GACNNNNNGTC	1 cut(s)	253
AhlI	ACTAGT	1 cut(s)	98
AjiI	CACGTC	2 cut(s)	1053, 1233
AjnI	CCWGG	2 cut(s)	1079, 1160
Alw21I	GWGCWC	1 cut(s)	492
Alw26I	GTCTC	3 cut(s)	757, 880, 1308
AlwI	GGATC	2 cut(s)	676, 1358
AlwNI	CAGNNNCTG	1 cut(s)	502
Ama87I	CYCGRG	3 cut(s)	288, 959, 1243
Aor51HI	AGCGCT	1 cut(s)	194
AoxI	GGCC	9 cut(s)	222, 369, 450, 978, 1158, 1163, 1182, 1194, 1227
ApeKI	GCWGC	4 cut(s)	639, 642, 802, 1036
AsiGI	ACCGGT	1 cut(s)	209
Asp718I	GGTACC	1 cut(s)	1333
AspLEI	GCGC	3 cut(s)	195, 535, 1363
AspS9I	GGNCC	8 cut(s)	439, 765, 772, 1077, 1158, 1164, 1194, 1237
AsuHPI	GGTGA	4 cut(s)	271, 403, 691, 1440
AsuII	TTCGAA	1 cut(s)	951
AvaI	CYCGRG	3 cut(s)	288, 959, 1243
AvaII	GGWCC	5 cut(s)	439, 765, 772, 1077, 1237
BaeGI	GKGCMC	1 cut(s)	312
BalI	TGGCCA	2 cut(s)	371, 1229
BanI	GGYRCC	3 cut(s)	307, 1333, 1360
BanII	GRGCYC	3 cut(s)	425, 492, 708
BbsI	GAAGAC	2 cut(s)	6, 246
Bbv12I	GWGCWC	1 cut(s)	492
BbvI	GCAGC	4 cut(s)	651, 654, 814, 1023
BccI	CCATC	3 cut(s)	77, 430, 559
BceAI	ACGGC	8 cut(s)	187, 361, 397, 640, 709, 710, 734, 844
BciT130I	CCWGG	2 cut(s)	1081, 1162
BclI	TGATCA	1 cut(s)	1068
BcoDI	GTCTC	3 cut(s)	757, 880, 1308
BcuI	ACTAGT	1 cut(s)	98
BfaI	CTAG	2 cut(s)	99, 539
BfoI	RGCGCY	3 cut(s)	196, 536, 1364
BfrI	CTTAAG	1 cut(s)	781
BfuAI	ACCTGC	2 cut(s)	1095, 1401
BglI	GCCNNNNNGGC	1 cut(s)	381
BglII	AGATCT	1 cut(s)	297
BisI	GCNGC	7 cut(s)	450, 453, 640, 643, 646, 803, 1037
BlsI	GCNGC	7 cut(s)	451, 454, 641, 644, 647, 804, 1038
BmcAI	AGTACT	2 cut(s)	97, 103
Bme18I	GGWCC	5 cut(s)	439, 765, 772, 1077, 1237
BmeRI	GACNNNNNGTC	1 cut(s)	253
BmeT110I	CYCGRG	3 cut(s)	288, 959, 1243
BmgBI	CACGTC	2 cut(s)	1053, 1233
BmgT120I	GGNCC	8 cut(s)	439, 765, 772, 1077, 1158, 1164, 1194, 1237
BmiI	GGNNCC	7 cut(s)	6, 309, 441, 1078, 1195, 1335, 1362
BmsI	GCATC	2 cut(s)	789, 1228
BoxI	GACNNNNGTC	1 cut(s)	770
BpiI	GAAGAC	2 cut(s)	6, 246
BpmI	CTGGAG	1 cut(s)	596
Bpu10I	CCTNAGC	1 cut(s)	806
Bpu14I	TTCGAA	1 cut(s)	951
BsaHI	GRCGYC	1 cut(s)	1361
BsaI	GGTCTC	1 cut(s)	880
BsaJI	CCNNGG	6 cut(s)	312, 610, 768, 959, 1042, 1364
BsaWI	WCCGGW	1 cut(s)	209
BsaXI	ACNNNNNCTCC	2 cut(s)	452, 482
Bsc4I	CCNNNNNNNGG	6 cut(s)	448, 762, 769, 774, 997, 1191
Bse118I	RCCGGY	3 cut(s)	209, 786, 1252
Bse1I	ACTGG	1 cut(s)	661
BseBI	CCWGG	2 cut(s)	1081, 1162
BseDI	CCNNGG	6 cut(s)	312, 610, 768, 959, 1042, 1364
BseGI	GGATG	1 cut(s)	987
BseLI	CCNNNNNNNGG	6 cut(s)	448, 762, 769, 774, 997, 1191
BseMII	CTCAG	1 cut(s)	820
BseNI	ACTGG	1 cut(s)	661
BseRI	GAGGAG	1 cut(s)	476
BseSI	GKGCMC	1 cut(s)	312
BseX3I	CGGCCG	1 cut(s)	450
BseXI	GCAGC	4 cut(s)	651, 654, 814, 1023
Bsh1236I	CGCG	5 cut(s)	231, 449, 455, 479, 1025
Bsh1285I	CGRYCG	3 cut(s)	453, 791, 1002
BshFI	GGCC	9 cut(s)	224, 371, 452, 980, 1160, 1165, 1184, 1196, 1229
BshNI	GGYRCC	3 cut(s)	307, 1333, 1360
BshTI	ACCGGT	1 cut(s)	209
BsiEI	CGRYCG	3 cut(s)	453, 791, 1002
BsiHKAI	GWGCWC	1 cut(s)	492
BsiHKCI	CYCGRG	3 cut(s)	288, 959, 1243
BsiWI	CGTACG	1 cut(s)	861
BslFI	GGGAC	2 cut(s)	1070, 1090
BslI	CCNNNNNNNGG	6 cut(s)	448, 762, 769, 774, 997, 1191
BsmAI	GTCTC	3 cut(s)	757, 880, 1308
BsmBI	CGTCTC	1 cut(s)	757
BsmFI	GGGAC	2 cut(s)	1070, 1090
BsmI	GAATGC	2 cut(s)	384, 641
BsnI	GGCC	9 cut(s)	224, 371, 452, 980, 1160, 1165, 1184, 1196, 1229
Bso31I	GGTCTC	1 cut(s)	880
BsoBI	CYCGRG	3 cut(s)	288, 959, 1243
Bsp119I	TTCGAA	1 cut(s)	951
Bsp1286I	GDGCHC	4 cut(s)	312, 425, 492, 708
Bsp143I	GATC	5 cut(s)	297, 668, 840, 1068, 1350
Bsp19I	CCATGG	1 cut(s)	610
Bsp68I	TCGCGA	1 cut(s)	231
BspANI	GGCC	9 cut(s)	224, 371, 452, 980, 1160, 1165, 1184, 1196, 1229
BspCNI	CTCAG	1 cut(s)	819
BspFNI	CGCG	5 cut(s)	231, 449, 455, 479, 1025
BspLI	GGNNCC	7 cut(s)	6, 309, 441, 1078, 1195, 1335, 1362
BspMI	ACCTGC	2 cut(s)	1095, 1401
BspPI	GGATC	2 cut(s)	676, 1358
BspQI	GCTCTTC	2 cut(s)	413, 855
BspT104I	TTCGAA	1 cut(s)	951
BspT107I	GGYRCC	3 cut(s)	307, 1333, 1360
BspTI	CTTAAG	1 cut(s)	781
BspTNI	GGTCTC	1 cut(s)	880
BsrBI	CCGCTC	1 cut(s)	1006
BsrFI	RCCGGY	3 cut(s)	209, 786, 1252
BsrI	ACTGG	1 cut(s)	661
BssAI	RCCGGY	3 cut(s)	209, 786, 1252
BssECI	CCNNGG	6 cut(s)	312, 610, 768, 959, 1042, 1364
BssMI	GATC	5 cut(s)	297, 668, 840, 1068, 1350
BssNAI	GTATAC	1 cut(s)	832
BssNI	GRCGYC	1 cut(s)	1361
BssT1I	CCWWGG	2 cut(s)	312, 610
Bst1107I	GTATAC	1 cut(s)	832
Bst2UI	CCWGG	2 cut(s)	1081, 1162
Bst4CI	ACNGT	1 cut(s)	185
Bst6I	CTCTTC	3 cut(s)	413, 855, 1089
BstACI	GRCGYC	1 cut(s)	1361
BstAFI	CTTAAG	1 cut(s)	781
BstAPI	GCANNNNNTGC	1 cut(s)	1110
BstBI	TTCGAA	1 cut(s)	951
BstC8I	GCNNGC	6 cut(s)	176, 373, 902, 1018, 1182, 1250
BstDEI	CTNAG	1 cut(s)	806
BstDSI	CCRYGG	1 cut(s)	610
BstF5I	GGATG	1 cut(s)	987
BstFNI	CGCG	5 cut(s)	231, 449, 455, 479, 1025
BstH2I	RGCGCY	3 cut(s)	196, 536, 1364
BstHHI	GCGC	3 cut(s)	195, 535, 1363
BstKTI	GATC	5 cut(s)	300, 671, 843, 1071, 1353
BstMAI	GTCTC	3 cut(s)	757, 880, 1308
BstMBI	GATC	5 cut(s)	297, 668, 840, 1068, 1350
BstMCI	CGRYCG	3 cut(s)	453, 791, 1002
BstNI	CCWGG	2 cut(s)	1081, 1162
BstNSI	RCATGY	1 cut(s)	256
BstPAI	GACNNNNGTC	1 cut(s)	770
BstSLI	GKGCMC	1 cut(s)	312
BstUI	CGCG	5 cut(s)	231, 449, 455, 479, 1025
BstV1I	GCAGC	4 cut(s)	651, 654, 814, 1023
BstV2I	GAAGAC	2 cut(s)	6, 246
BstX2I	RGATCY	1 cut(s)	297
BstYI	RGATCY	1 cut(s)	297
BstZ17I	GTATAC	1 cut(s)	832
BstZI	CGGCCG	1 cut(s)	450
BsuRI	GGCC	9 cut(s)	224, 371, 452, 980, 1160, 1165, 1184, 1196, 1229
BtgI	CCRYGG	1 cut(s)	610
BtgZI	GCGATG	1 cut(s)	1154
BtrI	CACGTC	2 cut(s)	1053, 1233
BtsCI	GGATG	1 cut(s)	987
BtsIMutI	CAGTG	1 cut(s)	181
BtuMI	TCGCGA	1 cut(s)	231
BveI	ACCTGC	2 cut(s)	1095, 1401
Cac8I	GCNNGC	6 cut(s)	176, 373, 902, 1018, 1182, 1250
CaiI	CAGNNNCTG	1 cut(s)	502
CciNI	GCGGCCGC	1 cut(s)	450
CfoI	GCGC	3 cut(s)	195, 535, 1363
Cfr10I	RCCGGY	3 cut(s)	209, 786, 1252
Cfr13I	GGNCC	8 cut(s)	439, 765, 772, 1077, 1158, 1164, 1194, 1237
Cfr9I	CCCGGG	1 cut(s)	959
CpoI	CGGWCCG	1 cut(s)	772
CseI	GACGC	1 cut(s)	1014
Csp6I	GTAC	6 cut(s)	96, 102, 658, 862, 1334, 1414
CspAI	ACCGGT	1 cut(s)	209
CspI	CGGWCCG	1 cut(s)	772
CviAII	CATG	5 cut(s)	253, 367, 611, 814, 1354
CviQI	GTAC	6 cut(s)	96, 102, 658, 862, 1334, 1414
DdeI	CTNAG	1 cut(s)	806
DinI	GGCGCC	1 cut(s)	1362
DpnI	GATC	5 cut(s)	299, 670, 842, 1070, 1352
DpnII	GATC	5 cut(s)	297, 668, 840, 1068, 1350
DrdI	GACNNNNNNGTC	2 cut(s)	872, 1444
DriI	GACNNNNNGTC	1 cut(s)	253
DseDI	GACNNNNNNGTC	2 cut(s)	872, 1444
EaeI	YGGCCR	5 cut(s)	222, 369, 450, 978, 1227
EagI	CGGCCG	1 cut(s)	450
Eam1104I	CTCTTC	3 cut(s)	413, 855, 1089
Eam1105I	GACNNNNNGTC	1 cut(s)	253
EarI	CTCTTC	3 cut(s)	413, 855, 1089
EciI	GGCGGA	3 cut(s)	500, 584, 1326
Ecl136II	GAGCTC	1 cut(s)	490
EclXI	CGGCCG	1 cut(s)	450
Eco130I	CCWWGG	2 cut(s)	312, 610
Eco147I	AGGCCT	1 cut(s)	1184
Eco24I	GRGCYC	3 cut(s)	425, 492, 708
Eco31I	GGTCTC	1 cut(s)	880
Eco32I	GATATC	1 cut(s)	204
Eco47I	GGWCC	5 cut(s)	439, 765, 772, 1077, 1237
Eco47III	AGCGCT	1 cut(s)	194
Eco52I	CGGCCG	1 cut(s)	450
Eco53kI	GAGCTC	1 cut(s)	490
Eco57I	CTGAAG	2 cut(s)	410, 839
Eco88I	CYCGRG	3 cut(s)	288, 959, 1243
EcoICRI	GAGCTC	1 cut(s)	490
EcoO109I	RGGNCCY	1 cut(s)	1194
EcoRII	CCWGG	2 cut(s)	1079, 1160
EcoRV	GATATC	1 cut(s)	204
EcoT14I	CCWWGG	2 cut(s)	312, 610
EcoT38I	GRGCYC	3 cut(s)	425, 492, 708
EgeI	GGCGCC	1 cut(s)	1362
EheI	GGCGCC	1 cut(s)	1362
ErhI	CCWWGG	2 cut(s)	312, 610
Esp3I	CGTCTC	1 cut(s)	757
FaeI	CATG	5 cut(s)	256, 370, 614, 817, 1357
FalI	AAGNNNNNCTT	2 cut(s)	923, 955
FaqI	GGGAC	2 cut(s)	1070, 1090
FatI	CATG	5 cut(s)	252, 366, 610, 813, 1353
FauI	CCCGC	1 cut(s)	811
FbaI	TGATCA	1 cut(s)	1068
FblI	GTMKAC	2 cut(s)	603, 831
Fnu4HI	GCNGC	7 cut(s)	450, 453, 640, 643, 646, 803, 1037
FokI	GGATG	1 cut(s)	974
FriOI	GRGCYC	3 cut(s)	425, 492, 708
Fsp4HI	GCNGC	7 cut(s)	450, 453, 640, 643, 646, 803, 1037
FspBI	CTAG	2 cut(s)	99, 539
GlaI	GCGC	3 cut(s)	194, 534, 1362
GluI	GCNGC	7 cut(s)	450, 453, 640, 643, 646, 803, 1037
GsuI	CTGGAG	1 cut(s)	596
HaeII	RGCGCY	3 cut(s)	196, 536, 1364
HaeIII	GGCC	9 cut(s)	224, 371, 452, 980, 1160, 1165, 1184, 1196, 1229
HgaI	GACGC	1 cut(s)	1014
HhaI	GCGC	3 cut(s)	195, 535, 1363
Hin1I	GRCGYC	1 cut(s)	1361
Hin1II	CATG	5 cut(s)	256, 370, 614, 817, 1357
Hin6I	GCGC	3 cut(s)	193, 533, 1361
HinP1I	GCGC	3 cut(s)	193, 533, 1361
HindIII	AAGCTT	2 cut(s)	543, 898
HinfI	GANTC	4 cut(s)	397, 505, 953, 1153
HphI	GGTGA	4 cut(s)	271, 403, 691, 1440
Hpy166II	GTNNAC	5 cut(s)	262, 411, 604, 832, 1240
Hpy188I	TCNGA	5 cut(s)	199, 390, 510, 757, 1350
Hpy188III	TCNNGA	6 cut(s)	74, 230, 290, 539, 991, 1267
Hpy8I	GTNNAC	5 cut(s)	262, 411, 604, 832, 1240
HpyAV	CCTTC	4 cut(s)	33, 466, 1195, 1347
HpyCH4III	ACNGT	1 cut(s)	185
HpyCH4IV	ACGT	2 cut(s)	1052, 1232
HpyCH4V	TGCA	8 cut(s)	267, 639, 802, 969, 1180, 1219, 1398, 1410
HpyF3I	CTNAG	1 cut(s)	806
HpySE526I	ACGT	2 cut(s)	1052, 1232
Hsp92I	GRCGYC	1 cut(s)	1361
Hsp92II	CATG	5 cut(s)	256, 370, 614, 817, 1357
HspAI	GCGC	3 cut(s)	193, 533, 1361
KasI	GGCGCC	1 cut(s)	1360
KpnI	GGTACC	1 cut(s)	1337
Ksp22I	TGATCA	1 cut(s)	1068
Kzo9I	GATC	5 cut(s)	297, 668, 840, 1068, 1350
LguI	GCTCTTC	2 cut(s)	413, 855
LmnI	GCTCC	5 cut(s)	10, 487, 571, 733, 1044
Lsp1109I	GCAGC	4 cut(s)	651, 654, 814, 1023
LweI	GCATC	2 cut(s)	789, 1228
MaeI	CTAG	2 cut(s)	99, 539
MaeII	ACGT	2 cut(s)	1052, 1232
MaeIII	GTNAC	1 cut(s)	1446
MalI	GATC	5 cut(s)	299, 670, 842, 1070, 1352
MbiI	CCGCTC	1 cut(s)	1006
MboI	GATC	5 cut(s)	297, 668, 840, 1068, 1350
MflI	RGATCY	1 cut(s)	297
MhlI	GDGCHC	4 cut(s)	312, 425, 492, 708
MlsI	TGGCCA	2 cut(s)	371, 1229
MluCI	AATT	2 cut(s)	428, 649
MluI	ACGCGT	1 cut(s)	1023
MluNI	TGGCCA	2 cut(s)	371, 1229
Mly113I	GGCGCC	1 cut(s)	1361
Mox20I	TGGCCA	2 cut(s)	371, 1229
MscI	TGGCCA	2 cut(s)	371, 1229
MseI	TTAA	2 cut(s)	782, 1453
MslI	CAYNNNNRTG	1 cut(s)	257
Msp20I	TGGCCA	2 cut(s)	371, 1229
MspA1I	CMGCKG	1 cut(s)	645
MspCI	CTTAAG	1 cut(s)	781
Mva1269I	GAATGC	2 cut(s)	384, 641
MvaI	CCWGG	2 cut(s)	1081, 1162
MvnI	CGCG	5 cut(s)	231, 449, 455, 479, 1025
NarI	GGCGCC	1 cut(s)	1361
NcoI	CCATGG	1 cut(s)	610
NdeII	GATC	5 cut(s)	297, 668, 840, 1068, 1350
NlaIII	CATG	5 cut(s)	256, 370, 614, 817, 1357
NlaIV	GGNNCC	7 cut(s)	6, 309, 441, 1078, 1195, 1335, 1362
NmeAIII	GCCGAG	1 cut(s)	956
NmuCI	GTSAC	1 cut(s)	1446
NotI	GCGGCCGC	1 cut(s)	450
NruI	TCGCGA	1 cut(s)	231
NspI	RCATGY	1 cut(s)	256
NspV	TTCGAA	1 cut(s)	951
PaeR7I	CTCGAG	1 cut(s)	288
PceI	AGGCCT	1 cut(s)	1184
PciI	ACATGT	1 cut(s)	252
PciSI	GCTCTTC	2 cut(s)	413, 855
PcsI	WCGNNNNNNNCGW	5 cut(s)	401, 753, 948, 1008, 1241
PctI	GAATGC	2 cut(s)	384, 641
PfeI	GAWTC	4 cut(s)	397, 505, 953, 1153
Pfl23II	CGTACG	1 cut(s)	861
PinAI	ACCGGT	1 cut(s)	209
PkrI	GCNGC	7 cut(s)	451, 454, 641, 644, 647, 804, 1038
PluTI	GGCGCC	1 cut(s)	1364
PscI	ACATGT	1 cut(s)	252
PshAI	GACNNNNGTC	1 cut(s)	770
Psp124BI	GAGCTC	1 cut(s)	492
Psp6I	CCWGG	2 cut(s)	1079, 1160
PspGI	CCWGG	2 cut(s)	1079, 1160
PspLI	CGTACG	1 cut(s)	861
PspN4I	GGNNCC	7 cut(s)	6, 309, 441, 1078, 1195, 1335, 1362
PspPI	GGNCC	8 cut(s)	439, 765, 772, 1077, 1158, 1164, 1194, 1237
PstNI	CAGNNNCTG	1 cut(s)	502
PsuI	RGATCY	1 cut(s)	297
RruI	TCGCGA	1 cut(s)	231
RsaI	GTAC	6 cut(s)	97, 103, 659, 863, 1335, 1415
RsaNI	GTAC	6 cut(s)	96, 102, 658, 862, 1334, 1414
RseI	CAYNNNNRTG	1 cut(s)	257
Rsr2I	CGGWCCG	1 cut(s)	772
RsrII	CGGWCCG	1 cut(s)	772
SacI	GAGCTC	1 cut(s)	492
SapI	GCTCTTC	2 cut(s)	413, 855
SaqAI	TTAA	2 cut(s)	782, 1453
SatI	GCNGC	7 cut(s)	450, 453, 640, 643, 646, 803, 1037
Sau3AI	GATC	5 cut(s)	297, 668, 840, 1068, 1350
Sau96I	GGNCC	8 cut(s)	439, 765, 772, 1077, 1158, 1164, 1194, 1237
ScaI	AGTACT	2 cut(s)	97, 103
SduI	GDGCHC	4 cut(s)	312, 425, 492, 708
SfaNI	GCATC	2 cut(s)	789, 1228
SfoI	GGCGCC	1 cut(s)	1362
Sfr274I	CTCGAG	1 cut(s)	288
SfuI	TTCGAA	1 cut(s)	951
SinI	GGWCC	5 cut(s)	439, 765, 772, 1077, 1237
SlaI	CTCGAG	1 cut(s)	288
SmaI	CCCGGG	1 cut(s)	961
SmiMI	CAYNNNNRTG	1 cut(s)	257
SmlI	CTYRAG	2 cut(s)	288, 781
SmoI	CTYRAG	2 cut(s)	288, 781
SpeI	ACTAGT	1 cut(s)	98
Sse9I	AATT	2 cut(s)	428, 649
SseBI	AGGCCT	1 cut(s)	1184
SspDI	GGCGCC	1 cut(s)	1360
SspMI	CTAG	2 cut(s)	99, 539
SstI	GAGCTC	1 cut(s)	492
StuI	AGGCCT	1 cut(s)	1184
StyI	CCWWGG	2 cut(s)	312, 610
TaaI	ACNGT	1 cut(s)	185
TaiI	ACGT	2 cut(s)	1055, 1235
TaqI	TCGA	9 cut(s)	289, 395, 548, 563, 597, 942, 951, 1002, 1266
TaqII	GACCGA	2 cut(s)	760, 1225
TasI	AATT	2 cut(s)	428, 649
TatI	WGTACW	2 cut(s)	95, 101
TauI	GCSGC	3 cut(s)	452, 455, 648
TfiI	GAWTC	4 cut(s)	397, 505, 953, 1153
Tru1I	TTAA	2 cut(s)	782, 1453
Tru9I	TTAA	2 cut(s)	782, 1453
TscAI	CASTG	1 cut(s)	188
TseFI	GTSAC	1 cut(s)	1446
TseI	GCWGC	4 cut(s)	639, 642, 802, 1036
Tsp45I	GTSAC	1 cut(s)	1446
TspDTI	ATGAA	1 cut(s)	355
TspGWI	ACGGA	1 cut(s)	349
TspMI	CCCGGG	1 cut(s)	959
TspRI	CASTG	1 cut(s)	188
Vha464I	CTTAAG	1 cut(s)	781
VpaK11BI	GGWCC	5 cut(s)	439, 765, 772, 1077, 1237
XbaI	TCTAGA	1 cut(s)	538
XceI	RCATGY	1 cut(s)	256
XhoI	CTCGAG	1 cut(s)	288
XmaI	CCCGGG	1 cut(s)	959
XmiI	GTMKAC	2 cut(s)	603, 831
XspI	CTAG	2 cut(s)	99, 539
ZrmI	AGTACT	2 cut(s)	97, 103

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.