Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr8

Orthogroup ID

OG0008819

Physical Location & Seq

Genomic Coordinates Reverse (-)

20923855 .. 20931343

Gene Structure 7489 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom08g21460.9

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2127 bp

ATGGCATTCTCAGCTTCCAATCATCCCCAAGGCACTTCCAGGACAGGGACACCTGGTGATGCTTTGTATAAGGAACTATGGCATGCTTGTGCTGGTCCCCTTGTCACCCTTCCACGTGAAGGGGAGCGAGTTTATTACTTTCCACAGGGTCATATGGAACAGCTTGAAGCATCAATGCATCAAGGGTCGGAGCAACAAATGCCTTCATTCAATCTTCCATCCAAAATTCTATGTAAAGTTGTTAATGTTCAGCTTCGGGCTGAACCTGAAACAGATGAGGTTTATGCACAAGTTACCCTCCTACCGGAAGCAGATCAAAGTGAGGTAACAAGCCCAGATCCTCCACTCCCAGAAACTCCACGGTGTACAGTACATTCATTCTGCAAGACACTTACTGCTTCTGACACCAGCACACATGGTGGATTCTCCGTCCTTCGTAGGCATGCTGATGATTGTCTGCCACCACTGGATATGTCCCAGCAACCTCCATGGCAAGAATTGGTTGCAACTGATTTGCATGGAAATGAATGGCATTTTCGGCACATATTTCGAGGGCAACCAAGGCGCCACTTGCTCACAACTGGATGGAGTGTTTTTGTGAGTTCTAAGAAATTAGTAGCTGGGGATGCATTTATATTCCTAAGAGGTGAAAATGGAGAGCTGCGTGTTGGAGTAAGGAGACTCATGAGACAACCAAGCAATATGCCGTCTTCTGTTATTTCTAGTCACAGCATGCATCTTGGAGTTTTGGCGACTGCATCTCATGCCATTGCAACTGGGACACTATTTTCTGTATTCTACAAGCCAAGAACAAGTCGGTCTGAGTTCCTTGTAAGTGTCAACAAGTACATTGAAGCTCGCAGTCAGAAGCTGTCTGTTGGGATGAGGTTTAAGATGAGATTTGAGGGTGAGGAAGTTCCTGAAAGAAGGTTCAGTGGTACAATTGTTGGAGTTGGAGATAATACAGCACCTGGATGGGCGAATTCTGAGTGGAGATCACTAAAGGTCCAATGGGATGAGCCCTCATCAATATTGCGACCAGATCGAGTATCACCATGGGATTTGGAGCCCCTGGTGGCAACTGCTGCCCAAAACTCCCAACCTGCACTGAGGAATAAGCGGGCTCGGCCTCCTGTTTTACCTTCGCCATCCCCAGACCTTACTGCGCTGGGTGAATGGAAATCCAAAGCTGAGTCTCCTTCGGCTTTCTCCTATAGCGACTCACAGCGTGGGCGAGACATTTATCCATCTCCGAAGTATAATTCTGCTTCAAAACCCAATTCTCTGTGCTTTACTGGGAATAATTCTCTTGCTGCTGTTTCTGGGAACTCGATGTTTTGGCCTAATCGAGTTGATGGTGTAACCGAGCCTTTTTCACCTGTTATGAACAAAGATTGTGGGGAAAGGAGACAAAGCACTGGGAATGGCTGTAGGCTGTTCGGAATTCAGCTACTTGAAAATTCTAATTTAGAAGAGACTTCTCCTGTGGTTACGGTGTCTGGAAAGTTGGGGGATACTCTACCAGTTTCATCATTTGATGCAGAATCTGACCAACATTCGGAACCATCAAATCTCAATCGATCTGATCTTCCTTCAGGAAGTTGTGATGCTGAGAAGTCATGTCTGAGATCACCACAGGAATCTCAAAGCAGGCAAATCCGGAGCTGCACAAAGGTTCACATGCAAGGGATTGCTGTTGGAAGGGCTGTAGATTTGACACGGTTTGAGCGGTACGAGGATCTGCTTAAGAAACTAGAAGAGATGTTCGATATTGAAGGTGAACTCTGTGGATCTACAAAGAAATGGCAGGTTGTCTACACCGATGATGAAGATGACATGATGATGGTTGGGGATGATCCATGGCATGAGTTCTGCAGCATGGTAAGGAAGATTTTTATCTACACATTAGAGGAAGTAAAGAGGTTGTCGCCCAAGATAAAACTTCCGCTGAATGAGGTCAAAGCTGGCCAGCCGGATTCTGAAGCAGCAGTCAACACTGAAGACCGATCGATCTATAGTTGGACCTGCATACTGATCTCCCCCCTGCATAAAGAAAAATTGGAAGAAAAAGAAGATGAAATTGGAAGATGGAACTTGACTGTCGCAAGAGACTCTCTGAAAAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0007568 GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0009889 GO:0009890 GO:0009892 GO:0010033 GO:0010150 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0019219 GO:0019222 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032501 GO:0032502 GO:0042221 GO:0042802 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045892 GO:0045934 GO:0048366 GO:0048367 GO:0048519 GO:0048523 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0060255 GO:0065007 GO:0080090 GO:0090693 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

AUX_IAA Auxin_resp B3

Protein Analysis

709

Amino Acids

79.12

Weight (kDa)

5.97

Isoelectric Point (pI)

61.72

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008819)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G59750 AT1G59750 AT1G59750 AT1G59750
fragaria_vesca	FvH4_5g27860 FvH4_5g27860 FvH4_5g27860 FvH4_5g27860 FvH4_5g27860
malus_domestica	MD08G1247700.v1.1
prunus_persica	Prupe.1G585200_v2.0.a1 Prupe.1G585200_v2.0.a1
pyrus_communis	pycom08g21460
rosa_chinensis	RchiOBHm_Chr7g0219771
rosa_laevigata	RLG00000002269
rosa_multiflora	Rmu_sc0005014.1_g000017
rosa_roxburghii	Rroxscaffold_3G00239870
rosa_rugosa	Rorug07G0187800 Rorug07G0187900
rosa_samantha	Rh7AG331600 Rh7BG321200 Rh7CG349000
rosa_wichuraiana	Rw7G027920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	3 cut(s)	1111, 1798, 2033
AccB1I	GGYRCC	1 cut(s)	564
AccBSI	CCGCTC	1 cut(s)	1729
AccI	GTMKAC	1 cut(s)	1815
AccIII	TCCGGA	1 cut(s)	1659
AciI	CCGC	3 cut(s)	1120, 1729, 1946
AclWI	GGATC	4 cut(s)	332, 1746, 1798, 1850
AcoI	YGGCCR	1 cut(s)	1966
AcsI	RAATTY	4 cut(s)	225, 982, 1443, 1459
AcuI	CTGAAG	3 cut(s)	1578, 2001, 2019
AcvI	CACGTG	1 cut(s)	116
AcyI	GRCGYC	1 cut(s)	565
AdeI	CACNNNGTG	3 cut(s)	56, 419, 1229
AfaI	GTAC	5 cut(s)	367, 372, 848, 940, 1733
AfiI	CCNNNNNNNGG	4 cut(s)	45, 119, 304, 1558
AflII	CTTAAG	1 cut(s)	1745
AgsI	TTSAA	6 cut(s)	167, 211, 854, 1272, 1457, 1775
AjnI	CCWGG	4 cut(s)	38, 52, 970, 1071
AjuI	GAANNNNNNNTTGG	2 cut(s)	2064, 2096
Alw26I	GTCTC	7 cut(s)	673, 682, 1200, 1230, 1402, 1469, 2103
AlwI	GGATC	4 cut(s)	332, 1746, 1798, 1850
AlwNI	CAGNNNCTG	3 cut(s)	871, 971, 1547
Aor13HI	TCCGGA	1 cut(s)	1659
AoxI	GGCC	3 cut(s)	1127, 1340, 1966
ApeKI	GCWGC	6 cut(s)	661, 1085, 1313, 1665, 1875, 1985
ApoI	RAATTY	4 cut(s)	225, 982, 1443, 1459
AspLEI	GCGC	2 cut(s)	567, 1168
AspS9I	GGNCC	3 cut(s)	95, 1006, 2022
AsuHPI	GGTGA	9 cut(s)	68, 97, 659, 920, 1044, 1184, 1368, 1623, 1790
AvaII	GGWCC	3 cut(s)	95, 1006, 2022
BaeI	ACNNNNGTAYC	2 cut(s)	930, 963
BalI	TGGCCA	1 cut(s)	1968
BanI	GGYRCC	1 cut(s)	564
BanII	GRGCYC	3 cut(s)	1023, 1071, 1126
BbrPI	CACGTG	1 cut(s)	116
BbsI	GAAGAC	2 cut(s)	702, 2007
BbvI	GCAGC	6 cut(s)	648, 1072, 1300, 1652, 1887, 1997
BccI	CCATC	9 cut(s)	226, 579, 969, 1156, 1255, 1349, 1573, 1837, 2082
BceAI	ACGGC	1 cut(s)	691
BcgI	CGANNNNNNTGC	2 cut(s)	530, 564
BciT130I	CCWGG	4 cut(s)	40, 54, 972, 1073
BciVI	GTATCC	1 cut(s)	1507
BcoDI	GTCTC	7 cut(s)	673, 682, 1200, 1230, 1402, 1469, 2103
BfaI	CTAG	2 cut(s)	723, 1754
BfmI	CTRYAG	5 cut(s)	1213, 1429, 1707, 1873, 2014
BfoI	RGCGCY	1 cut(s)	568
BfrI	CTTAAG	1 cut(s)	1745
BfuAI	ACCTGC	3 cut(s)	1111, 1798, 2033
BfuI	GTATCC	1 cut(s)	1507
BisI	GCNGC	6 cut(s)	662, 1086, 1314, 1666, 1876, 1986
BlsI	GCNGC	6 cut(s)	663, 1087, 1315, 1667, 1877, 1987
Bme1390I	CCNGG	4 cut(s)	40, 54, 972, 1073
Bme18I	GGWCC	3 cut(s)	95, 1006, 2022
BmgT120I	GGNCC	3 cut(s)	95, 1006, 2022
BmiI	GGNNCC	4 cut(s)	97, 566, 1068, 1563
BmrFI	CCNGG	4 cut(s)	40, 54, 972, 1073
BmrI	ACTGGG	3 cut(s)	786, 1305, 1428
BmsI	GCATC	8 cut(s)	49, 179, 187, 616, 745, 767, 1528, 1597
BmuI	ACTGGG	3 cut(s)	786, 1305, 1428
BpiI	GAAGAC	2 cut(s)	702, 2007
Bsa29I	ATCGAT	2 cut(s)	1579, 2009
BsaAI	YACGTR	1 cut(s)	116
BsaBI	GATNNNNATC	1 cut(s)	1895
BsaHI	GRCGYC	1 cut(s)	565
BsaJI	CCNNGG	7 cut(s)	28, 359, 488, 560, 1055, 1071, 1859
BsaWI	WCCGGW	2 cut(s)	304, 1659
Bsc4I	CCNNNNNNNGG	4 cut(s)	45, 119, 304, 1558
Bse1I	ACTGG	6 cut(s)	471, 586, 781, 1300, 1423, 1523
Bse3DI	GCAATG	1 cut(s)	768
Bse8I	GATNNNNATC	1 cut(s)	1895
BseAI	TCCGGA	1 cut(s)	1659
BseBI	CCWGG	4 cut(s)	40, 54, 972, 1073
BseCI	ATCGAT	2 cut(s)	1579, 2009
BseDI	CCNNGG	7 cut(s)	28, 359, 488, 560, 1055, 1071, 1859
BseGI	GGATG	9 cut(s)	22, 218, 590, 631, 888, 980, 1021, 1148, 1858
BseJI	GATNNNNATC	1 cut(s)	1895
BseLI	CCNNNNNNNGG	4 cut(s)	45, 119, 304, 1558
BseMI	GCAATG	1 cut(s)	768
BseMII	CTCAG	7 cut(s)	24, 813, 978, 1100, 1182, 1602, 1616
BseNI	ACTGG	6 cut(s)	471, 586, 781, 1300, 1423, 1523
BseXI	GCAGC	6 cut(s)	648, 1072, 1300, 1652, 1887, 1997
BseYI	CCCAGC	3 cut(s)	477, 620, 1168
BsgI	GTGCAG	2 cut(s)	1089, 1651
Bsh1285I	CGRYCG	1 cut(s)	2009
BshFI	GGCC	3 cut(s)	1129, 1342, 1968
BshNI	GGYRCC	1 cut(s)	564
BshVI	ATCGAT	2 cut(s)	1579, 2009
BsiEI	CGRYCG	1 cut(s)	2009
BsiSI	CCGG	3 cut(s)	305, 1660, 1973
BslFI	GGGAC	4 cut(s)	61, 81, 460, 793
BslI	CCNNNNNNNGG	4 cut(s)	45, 119, 304, 1558
BsmAI	GTCTC	7 cut(s)	673, 682, 1200, 1230, 1402, 1469, 2103
BsmFI	GGGAC	4 cut(s)	61, 81, 460, 793
BsmI	GAATGC	1 cut(s)	5
BsnI	GGCC	3 cut(s)	1129, 1342, 1968
Bsp1286I	GDGCHC	3 cut(s)	1023, 1071, 1126
Bsp13I	TCCGGA	1 cut(s)	1659
Bsp1407I	TGTACA	1 cut(s)	365
Bsp19I	CCATGG	3 cut(s)	488, 1055, 1859
BspACI	CCGC	3 cut(s)	1120, 1729, 1946
BspANI	GGCC	3 cut(s)	1129, 1342, 1968
BspCNI	CTCAG	7 cut(s)	23, 814, 979, 1101, 1183, 1603, 1617
BspDI	ATCGAT	2 cut(s)	1579, 2009
BspEI	TCCGGA	1 cut(s)	1659
BspHI	TCATGA	1 cut(s)	684
BspLI	GGNNCC	4 cut(s)	97, 566, 1068, 1563
BspMAI	CTGCAG	1 cut(s)	1877
BspMI	ACCTGC	3 cut(s)	1111, 1798, 2033
BspPI	GGATC	4 cut(s)	332, 1746, 1798, 1850
BspT107I	GGYRCC	1 cut(s)	564
BspTI	CTTAAG	1 cut(s)	1745
BsrBI	CCGCTC	1 cut(s)	1729
BsrDI	GCAATG	1 cut(s)	768
BsrGI	TGTACA	1 cut(s)	365
BsrI	ACTGG	6 cut(s)	471, 586, 781, 1300, 1423, 1523
BssECI	CCNNGG	7 cut(s)	28, 359, 488, 560, 1055, 1071, 1859
BssNI	GRCGYC	1 cut(s)	565
BssT1I	CCWWGG	5 cut(s)	28, 488, 560, 1055, 1859
Bst2UI	CCWGG	4 cut(s)	40, 54, 972, 1073
Bst4CI	ACNGT	5 cut(s)	363, 370, 1495, 1722, 2101
Bst6I	CTCTTC	2 cut(s)	1467, 1752
BstACI	GRCGYC	1 cut(s)	565
BstAFI	CTTAAG	1 cut(s)	1745
BstAPI	GCANNNNNTGC	3 cut(s)	199, 764, 1085
BstAUI	TGTACA	1 cut(s)	365
BstBAI	YACGTR	1 cut(s)	116
BstC8I	GCNNGC	8 cut(s)	84, 444, 734, 859, 1122, 1652, 1966, 1970
BstDEI	CTNAG	9 cut(s)	10, 606, 641, 822, 987, 1109, 1191, 1611, 1625
BstDSI	CCRYGG	4 cut(s)	359, 488, 1055, 1859
BstF5I	GGATG	9 cut(s)	22, 218, 590, 631, 888, 980, 1021, 1148, 1858
BstH2I	RGCGCY	1 cut(s)	568
BstHHI	GCGC	2 cut(s)	567, 1168
BstMAI	GTCTC	7 cut(s)	673, 682, 1200, 1230, 1402, 1469, 2103
BstMCI	CGRYCG	1 cut(s)	2009
BstMWI	GCNNNNNNNGC	9 cut(s)	11, 199, 538, 562, 571, 626, 764, 1085, 1126
BstNI	CCWGG	4 cut(s)	40, 54, 972, 1073
BstNSI	RCATGY	4 cut(s)	86, 446, 736, 1684
BstSCI	CCNGG	4 cut(s)	38, 52, 970, 1071
BstSFI	CTRYAG	5 cut(s)	1213, 1429, 1707, 1873, 2014
BstV1I	GCAGC	6 cut(s)	648, 1072, 1300, 1652, 1887, 1997
BstV2I	GAAGAC	2 cut(s)	702, 2007
BstX2I	RGATCY	3 cut(s)	337, 1738, 1790
BstYI	RGATCY	3 cut(s)	337, 1738, 1790
Bsu15I	ATCGAT	2 cut(s)	1579, 2009
BsuI	GTATCC	1 cut(s)	1507
BsuRI	GGCC	3 cut(s)	1129, 1342, 1968
BsuTUI	ATCGAT	2 cut(s)	1579, 2009
BtgI	CCRYGG	4 cut(s)	359, 488, 1055, 1859
BtsCI	GGATG	9 cut(s)	22, 218, 590, 631, 888, 980, 1021, 1148, 1858
BtsIMutI	CAGTG	5 cut(s)	464, 940, 1106, 1416, 1995
BveI	ACCTGC	3 cut(s)	1111, 1798, 2033
Cac8I	GCNNGC	8 cut(s)	84, 444, 734, 859, 1122, 1652, 1966, 1970
CaiI	CAGNNNCTG	3 cut(s)	871, 971, 1547
CciI	TCATGA	1 cut(s)	684
CfoI	GCGC	2 cut(s)	567, 1168
Cfr13I	GGNCC	3 cut(s)	95, 1006, 2022
ClaI	ATCGAT	2 cut(s)	1579, 2009
CsiI	ACCWGGT	1 cut(s)	52
Csp6I	GTAC	5 cut(s)	366, 371, 847, 939, 1732
CspCI	CAANNNNNGTGG	2 cut(s)	1378, 1413
CviQI	GTAC	5 cut(s)	366, 371, 847, 939, 1732
DdeI	CTNAG	9 cut(s)	10, 606, 641, 822, 987, 1109, 1191, 1611, 1625
DinI	GGCGCC	1 cut(s)	566
DraIII	CACNNNGTG	3 cut(s)	56, 419, 1229
EaeI	YGGCCR	1 cut(s)	1966
Eam1104I	CTCTTC	2 cut(s)	1467, 1752
EarI	CTCTTC	2 cut(s)	1467, 1752
Eco130I	CCWWGG	5 cut(s)	28, 488, 560, 1055, 1859
Eco24I	GRGCYC	3 cut(s)	1023, 1071, 1126
Eco47I	GGWCC	3 cut(s)	95, 1006, 2022
Eco57I	CTGAAG	3 cut(s)	1578, 2001, 2019
Eco72I	CACGTG	1 cut(s)	116
EcoRI	GAATTC	2 cut(s)	982, 1443
EcoRII	CCWGG	4 cut(s)	38, 52, 970, 1071
EcoT14I	CCWWGG	5 cut(s)	28, 488, 560, 1055, 1859
EcoT22I	ATGCAT	3 cut(s)	180, 631, 738
EcoT38I	GRGCYC	3 cut(s)	1023, 1071, 1126
EgeI	GGCGCC	1 cut(s)	566
EheI	GGCGCC	1 cut(s)	566
ErhI	CCWWGG	5 cut(s)	28, 488, 560, 1055, 1859
FaqI	GGGAC	4 cut(s)	61, 81, 460, 793
FauI	CCCGC	1 cut(s)	1113
FauNDI	CATATG	1 cut(s)	153
FblI	GTMKAC	1 cut(s)	1815
Fnu4HI	GCNGC	6 cut(s)	662, 1086, 1314, 1666, 1876, 1986
FokI	GGATG	9 cut(s)	9, 205, 597, 638, 895, 987, 1028, 1135, 1865
FriOI	GRGCYC	3 cut(s)	1023, 1071, 1126
Fsp4HI	GCNGC	6 cut(s)	662, 1086, 1314, 1666, 1876, 1986
FspBI	CTAG	2 cut(s)	723, 1754
GlaI	GCGC	2 cut(s)	566, 1167
GluI	GCNGC	6 cut(s)	662, 1086, 1314, 1666, 1876, 1986
GsaI	CCCAGC	3 cut(s)	481, 624, 1172
HaeII	RGCGCY	1 cut(s)	568
HaeIII	GGCC	3 cut(s)	1129, 1342, 1968
HapII	CCGG	3 cut(s)	305, 1660, 1973
HhaI	GCGC	2 cut(s)	567, 1168
Hin1I	GRCGYC	1 cut(s)	565
Hin6I	GCGC	2 cut(s)	565, 1166
HinP1I	GCGC	2 cut(s)	565, 1166
HincII	GTYRAC	2 cut(s)	841, 1993
HindII	GTYRAC	2 cut(s)	841, 1993
HinfI	GANTC	8 cut(s)	423, 681, 1193, 1220, 1544, 1640, 1976, 2111
HpaII	CCGG	3 cut(s)	305, 1660, 1973
HphI	GGTGA	9 cut(s)	68, 97, 659, 920, 1044, 1184, 1368, 1623, 1790
Hpy166II	GTNNAC	6 cut(s)	366, 841, 1678, 1781, 1816, 1993
Hpy188III	TCNNGA	5 cut(s)	685, 920, 1500, 1596, 1660
Hpy8I	GTNNAC	6 cut(s)	366, 841, 1678, 1781, 1816, 1993
HpyCH4III	ACNGT	5 cut(s)	363, 370, 1495, 1722, 2101
HpyCH4IV	ACGT	1 cut(s)	115
HpyF10VI	GCNNNNNNNGC	9 cut(s)	11, 199, 538, 562, 571, 626, 764, 1085, 1126
HpyF3I	CTNAG	9 cut(s)	10, 606, 641, 822, 987, 1109, 1191, 1611, 1625
HpySE526I	ACGT	1 cut(s)	115
Hsp92I	GRCGYC	1 cut(s)	565
HspAI	GCGC	2 cut(s)	565, 1166
KasI	GGCGCC	1 cut(s)	564
Kpn2I	TCCGGA	1 cut(s)	1659
LmnI	GCTCC	4 cut(s)	124, 190, 1066, 1662
Lsp1109I	GCAGC	6 cut(s)	648, 1072, 1300, 1652, 1887, 1997
LweI	GCATC	8 cut(s)	49, 179, 187, 616, 745, 767, 1528, 1597
MabI	ACCWGGT	1 cut(s)	52
MaeI	CTAG	2 cut(s)	723, 1754
MaeII	ACGT	1 cut(s)	115
MaeIII	GTNAC	6 cut(s)	103, 292, 325, 725, 1360, 1489
MbiI	CCGCTC	1 cut(s)	1729
MfeI	CAATTG	1 cut(s)	942
MflI	RGATCY	3 cut(s)	337, 1738, 1790
MhlI	GDGCHC	3 cut(s)	1023, 1071, 1126
MlsI	TGGCCA	1 cut(s)	1968
MluNI	TGGCCA	1 cut(s)	1968
Mly113I	GGCGCC	1 cut(s)	565
MlyI	GAGTC	4 cut(s)	675, 1202, 1214, 2105
MmeI	TCCRAC	6 cut(s)	168, 649, 928, 934, 1678, 2000
Mox20I	TGGCCA	1 cut(s)	1968
Mph1103I	ATGCAT	3 cut(s)	180, 631, 738
MroI	TCCGGA	1 cut(s)	1659
MscI	TGGCCA	1 cut(s)	1968
MseI	TTAA	3 cut(s)	243, 891, 1746
MslI	CAYNNNNRTG	5 cut(s)	87, 447, 522, 973, 1841
Msp20I	TGGCCA	1 cut(s)	1968
MspA1I	CMGCKG	1 cut(s)	1948
MspCI	CTTAAG	1 cut(s)	1745
MspI	CCGG	3 cut(s)	305, 1660, 1973
MspR9I	CCNGG	4 cut(s)	40, 54, 972, 1073
MunI	CAATTG	1 cut(s)	942
Mva1269I	GAATGC	1 cut(s)	5
MvaI	CCWGG	4 cut(s)	40, 54, 972, 1073
MwoI	GCNNNNNNNGC	9 cut(s)	11, 199, 538, 562, 571, 626, 764, 1085, 1126
NarI	GGCGCC	1 cut(s)	565
NcoI	CCATGG	3 cut(s)	488, 1055, 1859
NdeI	CATATG	1 cut(s)	153
NlaIV	GGNNCC	4 cut(s)	97, 566, 1068, 1563
NmeAIII	GCCGAG	1 cut(s)	1105
NmuCI	GTSAC	2 cut(s)	103, 725
NsiI	ATGCAT	3 cut(s)	180, 631, 738
NspI	RCATGY	4 cut(s)	86, 446, 736, 1684
PaeI	GCATGC	3 cut(s)	86, 446, 736
PagI	TCATGA	1 cut(s)	684
PctI	GAATGC	1 cut(s)	5
PfeI	GAWTC	4 cut(s)	423, 1544, 1640, 1976
PfoI	TCCNGGA	1 cut(s)	38
PkrI	GCNGC	6 cut(s)	663, 1087, 1315, 1667, 1877, 1987
Ple19I	CGATCG	1 cut(s)	2009
PleI	GAGTC	4 cut(s)	675, 1201, 1214, 2105
PluTI	GGCGCC	1 cut(s)	568
PmaCI	CACGTG	1 cut(s)	116
PmlI	CACGTG	1 cut(s)	116
PpsI	GAGTC	4 cut(s)	675, 1201, 1214, 2105
Ppu21I	YACGTR	1 cut(s)	116
Psp6I	CCWGG	4 cut(s)	38, 52, 970, 1071
PspCI	CACGTG	1 cut(s)	116
PspFI	CCCAGC	3 cut(s)	477, 620, 1168
PspGI	CCWGG	4 cut(s)	38, 52, 970, 1071
PspN4I	GGNNCC	4 cut(s)	97, 566, 1068, 1563
PspPI	GGNCC	3 cut(s)	95, 1006, 2022
PstI	CTGCAG	1 cut(s)	1877
PstNI	CAGNNNCTG	3 cut(s)	871, 971, 1547
PsuI	RGATCY	3 cut(s)	337, 1738, 1790
PvuI	CGATCG	1 cut(s)	2009
RsaI	GTAC	5 cut(s)	367, 372, 848, 940, 1733
RsaNI	GTAC	5 cut(s)	366, 371, 847, 939, 1732
RseI	CAYNNNNRTG	5 cut(s)	87, 447, 522, 973, 1841
SaqAI	TTAA	3 cut(s)	243, 891, 1746
SatI	GCNGC	6 cut(s)	662, 1086, 1314, 1666, 1876, 1986
Sau96I	GGNCC	3 cut(s)	95, 1006, 2022
SchI	GAGTC	4 cut(s)	675, 1202, 1214, 2105
ScrFI	CCNGG	4 cut(s)	40, 54, 972, 1073
SduI	GDGCHC	3 cut(s)	1023, 1071, 1126
SexAI	ACCWGGT	1 cut(s)	52
SfaNI	GCATC	8 cut(s)	49, 179, 187, 616, 745, 767, 1528, 1597
SfcI	CTRYAG	5 cut(s)	1213, 1429, 1707, 1873, 2014
SfoI	GGCGCC	1 cut(s)	566
SinI	GGWCC	3 cut(s)	95, 1006, 2022
SmiMI	CAYNNNNRTG	5 cut(s)	87, 447, 522, 973, 1841
SmlI	CTYRAG	1 cut(s)	1745
SmoI	CTYRAG	1 cut(s)	1745
SphI	GCATGC	3 cut(s)	86, 446, 736
SsiI	CCGC	3 cut(s)	1120, 1729, 1946
SspDI	GGCGCC	1 cut(s)	564
SspI	AATATT	1 cut(s)	1032
SspMI	CTAG	2 cut(s)	723, 1754
StyD4I	CCNGG	4 cut(s)	38, 52, 970, 1071
StyI	CCWWGG	5 cut(s)	28, 488, 560, 1055, 1859
TaaI	ACNGT	5 cut(s)	363, 370, 1495, 1722, 2101
TaiI	ACGT	1 cut(s)	118
TaqI	TCGA	7 cut(s)	550, 1045, 1331, 1348, 1579, 1767, 2009
TaqII	GACCGA	2 cut(s)	807, 2019
TatI	WGTACW	3 cut(s)	365, 370, 846
TfiI	GAWTC	4 cut(s)	423, 1544, 1640, 1976
Tru1I	TTAA	3 cut(s)	243, 891, 1746
Tru9I	TTAA	3 cut(s)	243, 891, 1746
TscAI	CASTG	5 cut(s)	471, 940, 1113, 1423, 2002
TseFI	GTSAC	2 cut(s)	103, 725
TseI	GCWGC	6 cut(s)	661, 1085, 1313, 1665, 1875, 1985
Tsp45I	GTSAC	2 cut(s)	103, 725
TspDTI	ATGAA	7 cut(s)	195, 366, 540, 1400, 1518, 1842, 2091
TspGWI	ACGGA	1 cut(s)	418
TspRI	CASTG	5 cut(s)	471, 940, 1113, 1423, 2002
Vha464I	CTTAAG	1 cut(s)	1745
VpaK11BI	GGWCC	3 cut(s)	95, 1006, 2022
XapI	RAATTY	4 cut(s)	225, 982, 1443, 1459
XceI	RCATGY	4 cut(s)	86, 446, 736, 1684
XmiI	GTMKAC	1 cut(s)	1815
XspI	CTAG	2 cut(s)	723, 1754
Zsp2I	ATGCAT	3 cut(s)	180, 631, 738

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.