Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G59750 AT1G59750 AT1G59750 AT1G59750 |
| fragaria_vesca | FvH4_5g27860 FvH4_5g27860 FvH4_5g27860 FvH4_5g27860 FvH4_5g27860 |
| malus_domestica | MD08G1247700.v1.1 |
| prunus_persica | Prupe.1G585200_v2.0.a1 Prupe.1G585200_v2.0.a1 |
| pyrus_communis | pycom08g21460 |
| rosa_chinensis | RchiOBHm_Chr7g0219771 |
| rosa_laevigata | RLG00000002269 |
| rosa_multiflora | Rmu_sc0005014.1_g000017 |
| rosa_roxburghii | Rroxscaffold_3G00239870 |
| rosa_rugosa | Rorug07G0187800 Rorug07G0187900 |
| rosa_samantha | Rh7AG331600 Rh7BG321200 Rh7CG349000 |
| rosa_wichuraiana | Rw7G027920 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 55 |
| AcsI | RAATTY | 1 cut(s) | 67 |
| AgsI | TTSAA | 5 cut(s) | 22, 73, 110, 155, 191 |
| AluBI | AGCT | 1 cut(s) | 13 |
| AluI | AGCT | 1 cut(s) | 13 |
| AlwI | GGATC | 1 cut(s) | 55 |
| AoxI | GGCC | 1 cut(s) | 212 |
| ApoI | RAATTY | 1 cut(s) | 67 |
| BccI | CCATC | 1 cut(s) | 117 |
| BfaI | CTAG | 1 cut(s) | 226 |
| BlpI | GCTNAGC | 1 cut(s) | 9 |
| BmsI | GCATC | 2 cut(s) | 41, 91 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 9 |
| BseGI | GGATG | 1 cut(s) | 32 |
| BshFI | GGCC | 1 cut(s) | 214 |
| BsnI | GGCC | 1 cut(s) | 214 |
| Bsp143I | GATC | 2 cut(s) | 25, 60 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 9 |
| BspANI | GGCC | 1 cut(s) | 214 |
| BspPI | GGATC | 1 cut(s) | 55 |
| BssMI | GATC | 2 cut(s) | 25, 60 |
| Bst4CI | ACNGT | 2 cut(s) | 52, 115 |
| BstDEI | CTNAG | 3 cut(s) | 9, 57, 216 |
| BstF5I | GGATG | 1 cut(s) | 32 |
| BstKTI | GATC | 2 cut(s) | 28, 63 |
| BstMBI | GATC | 2 cut(s) | 25, 60 |
| BstX2I | RGATCY | 1 cut(s) | 60 |
| BstYI | RGATCY | 1 cut(s) | 60 |
| BsuRI | GGCC | 1 cut(s) | 214 |
| BtgZI | GCGATG | 1 cut(s) | 136 |
| BtsCI | GGATG | 1 cut(s) | 32 |
| CviAII | CATG | 3 cut(s) | 29, 40, 118 |
| CviJI | RGCY | 4 cut(s) | 8, 13, 127, 214 |
| CviKI_1 | RGCY | 4 cut(s) | 8, 13, 127, 214 |
| DdeI | CTNAG | 3 cut(s) | 9, 57, 216 |
| DpnI | GATC | 2 cut(s) | 27, 62 |
| DpnII | GATC | 2 cut(s) | 25, 60 |
| EcoT22I | ATGCAT | 1 cut(s) | 34 |
| FaeI | CATG | 3 cut(s) | 32, 43, 121 |
| FaiI | YATR | 4 cut(s) | 30, 41, 119, 168 |
| FatI | CATG | 3 cut(s) | 28, 39, 117 |
| FokI | GGATG | 1 cut(s) | 19 |
| FspBI | CTAG | 1 cut(s) | 226 |
| FspEI | CC | 7 cut(s) | 49, 77, 78, 109, 196, 209, 220 |
| HaeIII | GGCC | 1 cut(s) | 214 |
| Hin1II | CATG | 3 cut(s) | 32, 43, 121 |
| HindIII | AAGCTT | 1 cut(s) | 11 |
| HpyCH4III | ACNGT | 2 cut(s) | 52, 115 |
| HpyCH4V | TGCA | 3 cut(s) | 32, 104, 201 |
| HpyF3I | CTNAG | 3 cut(s) | 9, 57, 216 |
| Hsp92II | CATG | 3 cut(s) | 32, 43, 121 |
| Kzo9I | GATC | 2 cut(s) | 25, 60 |
| LweI | GCATC | 2 cut(s) | 41, 91 |
| MaeI | CTAG | 1 cut(s) | 226 |
| MalI | GATC | 2 cut(s) | 27, 62 |
| MboI | GATC | 2 cut(s) | 25, 60 |
| MflI | RGATCY | 1 cut(s) | 60 |
| MluCI | AATT | 4 cut(s) | 67, 93, 163, 202 |
| MmeI | TCCRAC | 1 cut(s) | 60 |
| MnlI | CCTC | 1 cut(s) | 206 |
| Mph1103I | ATGCAT | 1 cut(s) | 34 |
| NdeII | GATC | 2 cut(s) | 25, 60 |
| NlaIII | CATG | 3 cut(s) | 32, 43, 121 |
| NsiI | ATGCAT | 1 cut(s) | 34 |
| PsuI | RGATCY | 1 cut(s) | 60 |
| Sau3AI | GATC | 2 cut(s) | 25, 60 |
| SetI | ASST | 2 cut(s) | 15, 198 |
| SfaNI | GCATC | 2 cut(s) | 41, 91 |
| SgeI | CNNG | 9 cut(s) | 26, 41, 52, 97, 130, 140, 161, 200, 220 |
| Sse9I | AATT | 4 cut(s) | 67, 93, 163, 202 |
| SspMI | CTAG | 1 cut(s) | 226 |
| TaaI | ACNGT | 2 cut(s) | 52, 115 |
| TasI | AATT | 4 cut(s) | 67, 93, 163, 202 |
| XapI | RAATTY | 1 cut(s) | 67 |
| XspI | CTAG | 1 cut(s) | 226 |
| Zsp2I | ATGCAT | 1 cut(s) | 34 |