FvH4_5g33990

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0016862
Physical Location & Seq
Reverse (-)
24650557 .. 24653650
3094 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g33990.t1

Sequence Viewer

Length: 2298 bp
ATGGCTTCTCTACCTTCAGTTGCTGTTAGTGGCAATATCAAGCTTGACCAAGAATTCAGAAAACATCCCACAAGTTCTATTTCTTCAGAAAAGAGTGGAATTGCAAACGTGTCGTATCAGAAAAGTCAGACCATCACAAGTTTGGATGGAAGTTCAGAACCCAGGTCTCTGGACTTCCGAGAAGCTCTAGAGATATTTAGAGAGGGTTCTAATAAGGTTGATTCCTCTTACTATGTTCCTCTCTTGCAAGAATGTATAGAGAGGAATTCGGCTTCCAATGCGCAAGCTGTGCATGGGCACATCATTAAGACAGGAAGCCACCAAGATTTGTTTGTCACAACTTTCCTTGTCAATGTTTATGCAAAGTGTAGAATCATGGAAGATGCTCATAAGGTTTTCGACAAATTGCCTAAACGAAATGTTGTTTCATGGACAGCTTTGATGACAGGTTATGTTCACAATTCGCGGCCAGAACTTGCCATTCGGGTTTTCCTGGAGATGTTAGAAGCTGGGGCTTATCCTACCAATTATACTCTAGGAATTGTTTTCAATGCTTCATCTACTTTGTACTTGATTGAGTTAGGGAAGCAATTGCATGCCTACAGTATAAAATACCGGATTGACTTTGATACTAGTATTGGAAACAATCTTTGCAGTTTATACTCCAAATGTGGGAACTTGGAATCCGCTTTTAAAGCATTTAAGAAAATTAAGGAAAAGAATGTGATCTCTTGGACTTCAGCTATATCTGCTTGTGGTGATAATGGCGATTCTTCAAAGGGTTTGGAACTTTTTACTGAGATGCTTTCAGAGGGAACCGAGCCTAACGACTACACCCTGACCAGTGCCTTGAGCTTGTGTTGTACAATGCAGTCTTTGGGAGCAGGGATGCAGATACATTCCTTAGTCATTAAACTTGGCTATGAGTTGAACCTTCCGGTAAGAAATGCTATCATGTATTTGTACCTCAAATGTGGCATGATTAATGAGGCTAGAAAGTTGTTTAATGGAATGGGAGATATGAGCTTGATTACATGGAATGCAATGATTGCAGGTCATGCCCAACTTATTGATCTTGCAGAAGACGATCTTTCAGCATACCGAAGTGGAATTGAAGCTCTTAACATTTTCTTGAAATTGAATGGCTCCGGGGTGAAACCTGATTTATTTACCTACTCAAGTATCTTAACTATATGTAGTAGTTTGGTGGCTTTAGACCAGGGAGAACAGGTTCATGCTCAGAGCATCAAAAGCGGGTTTGTCTCAGATATTGTAGTAGCAACTGCGCTAGTCAATATGTACAATAAATGTGGAAGCATTGAGAAAGCAAGTAAAGCGTTCATAGAGATGTCTACAAGAACGCTGATATCGTGGACTAGTATGATTGCAGGTTTTGCGCAGCATGGCCGGACTCAGCAAGCACTACAGCTCTTTGAGGATATGAGAATTGCAGGAGTCAGACCAAATCAGGTTACTTTTGTGAGTGTTCTATCTGCTTGTAGCTATGCTGGAATGGTCAATGAAGCACTTGGTTACTTTGAGTCCATGAAAAAGGACTACAGGATCAAACCTGTGATGGACCATTATGCCTGCCTTATTGATATGTATGTAAGGTTGGGTCGGTTAGATGAAGCCTTTGGTCTTGTCAAGAAAATGGATTTTGAACCGAATGAGTTTATATGGTCAACCTTGGTTGCAGGTTGTAGAAGACATGGACATATAGACAGGGGAGTTTATGCTGCTGAACAGTTGCTCAAGCTCAAACCAAAAGATACCGAGGCTTATGTCATGTTGTTGGACATGTACATCTCTGCAGAAAGATGGAAGGATGTTTCTAGGGTGAGAAAAATCATGAAAGAGGAGAAGCTTGGGGAGCTGGAGGAGTGGAGCTGGATTAGCATTAAAGACAAGGTTCATTCATTTAAACCCAATGATAAATCTCATCCTCAAAGTGAAGTTGTTCAAAAGTACGTTGATAGTTTGATTGATCAAGTCAAGAGTCTTGGATACAAGCCAGTAGAGAGTTTGGAATTAACTGATGAAGACAAAGAAACCACTTTGTTCTCTTCTACATCTTTCCATAGTGAAAAGTTGGCAATTGCTTTTGGATTGTTGAACACACCAAATGCTGCGCCAATTCGGGTCATCAAGAATATCAGTATGTGCAGGGATTGCCATAGTTTTGTTAAGTTTGTATCATTACTGACTTCTAGGGAAATTTCCATTCGAGATAGCAAGCGCCTTCACAAGTTTTTGAATGGAAAATGTTCATGTGGAGATTTTGGAGCTCTTCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR PPR_2

Protein Analysis

766

Amino Acids

85.43

Weight (kDa)

7.25

Isoelectric Point (pI)

35.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 139 - 185 4.1e-10 PPR repeat family
PPR_2 PF13041 240 - 288 3.1e-09 PPR repeat family
PPR_2 PF13041 455 - 500 4.4e-11 PPR repeat family
PPR PF01535 456 - 485 1.1e-06 PPR repeat
PPR_long PF17177 471 - 572 9.7e-06 Pentacotripeptide-repeat region of PRORP
PPR_3 PF13812 477 - 537 2.5e-08 Pentatricopeptide repeat domain
E_motif PF20431 572 - 623 1.9e-09 E motif
DYW_deaminase PF14432 677 - 761 1.3e-28 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0016862)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g33990
malus_domestica MD15G1390700.v1.1
prunus_persica Prupe.1G539500_v2.0.a1
pyrus_communis pycom15g34980
rosa_chinensis RchiOBHm_Chr7g0233371
rosa_laevigata RLG00000001274
rosa_multiflora Rmu_sc0008806.1_g000005
rosa_roxburghii Rroxscaffold_3G00227330
rosa_rugosa Rorug07G0280500
rosa_samantha Rh7BG409100 Rh7CG455500
rosa_wichuraiana Rw0G022470 Rw7G035890 Rw7G035930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 2 cut(s) 282, 1398
Acc36I ACCTGC 3 cut(s) 1043, 1379, 1688
AccI GTMKAC 1 cut(s) 1352
AccII CGCG 1 cut(s) 466
AciI CCGC 3 cut(s) 466, 687, 1254
AclWI GGATC 1 cut(s) 1571
AcoI YGGCCR 2 cut(s) 467, 1405
AcsI RAATTY 3 cut(s) 53, 265, 2217
AcuI CTGAAG 2 cut(s) 69, 723
AfaI GTAC 6 cut(s) 569, 865, 965, 1301, 1805, 1970
AfiI CCNNNNNNNGG 1 cut(s) 672
AflIII ACRYGT 2 cut(s) 108, 1800
AhlI ACTAGT 2 cut(s) 632, 1376
AjnI CCWGG 3 cut(s) 161, 492, 1218
AloI GAACNNNNNNTCC 4 cut(s) 668, 700, 1215, 1247
Alw21I GWGCWC 1 cut(s) 2290
Alw26I GTCTC 2 cut(s) 171, 1267
AlwI GGATC 1 cut(s) 1571
AlwNI CAGNNNCTG 1 cut(s) 23
AoxI GGCC 2 cut(s) 467, 1405
ApeKI GCWGC 3 cut(s) 1399, 1739, 2129
ApoI RAATTY 3 cut(s) 53, 265, 2217
AseI ATTAAT 1 cut(s) 984
Asp700I GAANNNNTTC 3 cut(s) 1230, 1959, 2266
AspLEI GCGC 5 cut(s) 283, 1288, 1399, 2134, 2241
AspS9I GGNCC 1 cut(s) 1579
AsuC2I CCSGG 1 cut(s) 1150
AsuHPI GGTGA 3 cut(s) 770, 1165, 1852
AvaII GGWCC 1 cut(s) 1579
BaeGI GKGCMC 1 cut(s) 300
BaeI ACNNNNGTAYC 2 cut(s) 1165, 1198
BanII GRGCYC 1 cut(s) 2290
BbsI GAAGAC 3 cut(s) 1089, 1714, 2049
Bbv12I GWGCWC 1 cut(s) 2290
BbvI GCAGC 3 cut(s) 1411, 1726, 2116
BccI CCATC 4 cut(s) 140, 140, 1570, 1815
BcgI CGANNNNNNTGC 2 cut(s) 93, 127
BciT130I CCWGG 3 cut(s) 163, 494, 1220
BciVI GTATCC 1 cut(s) 2000
BclI TGATCA 1 cut(s) 1987
BcnI CCSGG 1 cut(s) 1150
BcoDI GTCTC 2 cut(s) 171, 1267
BcuI ACTAGT 2 cut(s) 632, 1376
BfaI CTAG 8 cut(s) 188, 536, 633, 993, 1289, 1377, 1836, 2211
BfmI CTRYAG 4 cut(s) 601, 1424, 1558, 1812
BfoI RGCGCY 1 cut(s) 2242
BfuAI ACCTGC 3 cut(s) 1043, 1379, 1688
BfuI GTATCC 1 cut(s) 2000
BisI GCNGC 4 cut(s) 467, 1400, 1740, 2130
BlsI GCNGC 4 cut(s) 468, 1401, 1741, 2131
Bme1390I CCNGG 4 cut(s) 163, 494, 1150, 1220
Bme18I GGWCC 1 cut(s) 1579
BmgT120I GGNCC 1 cut(s) 1579
BmiI GGNNCC 2 cut(s) 817, 1147
BmrFI CCNGG 4 cut(s) 163, 494, 1150, 1220
BmsI GCATC 4 cut(s) 373, 792, 879, 1254
BpiI GAAGAC 3 cut(s) 1089, 1714, 2049
BpmI CTGGAG 2 cut(s) 515, 1898
BpuEI CTTGAG 3 cut(s) 871, 1162, 1739
BpuMI CCSGG 1 cut(s) 1150
BsaI GGTCTC 1 cut(s) 171
BsaJI CCNNGG 5 cut(s) 161, 1149, 1219, 1689, 1776
BsaWI WCCGGW 2 cut(s) 615, 937
BsaXI ACNNNNNCTCC 2 cut(s) 1215, 1245
Bsc4I CCNNNNNNNGG 1 cut(s) 672
Bse1I ACTGG 2 cut(s) 843, 2015
Bse3DI GCAATG 1 cut(s) 1050
BseBI CCWGG 3 cut(s) 163, 494, 1220
BseDI CCNNGG 5 cut(s) 161, 1149, 1219, 1689, 1776
BseGI GGATG 5 cut(s) 64, 151, 894, 1834, 1942
BseLI CCNNNNNNNGG 1 cut(s) 672
BseMI GCAATG 1 cut(s) 1050
BseMII CTCAG 4 cut(s) 789, 1253, 1278, 1427
BseNI ACTGG 2 cut(s) 843, 2015
BseRI GAGGAG 2 cut(s) 1874, 1895
BseSI GKGCMC 1 cut(s) 300
BseXI GCAGC 3 cut(s) 1411, 1726, 2116
BseYI CCCAGC 1 cut(s) 509
BsgI GTGCAG 1 cut(s) 2185
Bsh1236I CGCG 1 cut(s) 466
BshFI GGCC 2 cut(s) 469, 1407
BsiHKAI GWGCWC 1 cut(s) 2290
BsiSI CCGG 4 cut(s) 616, 938, 1149, 1408
BslI CCNNNNNNNGG 1 cut(s) 672
BsmAI GTCTC 2 cut(s) 171, 1267
BsmI GAATGC 1 cut(s) 1045
BsnI GGCC 2 cut(s) 469, 1407
Bso31I GGTCTC 1 cut(s) 171
Bsp1286I GDGCHC 2 cut(s) 300, 2290
Bsp1407I TGTACA 3 cut(s) 863, 1299, 1803
Bsp143I GATC 5 cut(s) 726, 1072, 1087, 1563, 1987
BspACI CCGC 3 cut(s) 466, 687, 1254
BspANI GGCC 2 cut(s) 469, 1407
BspCNI CTCAG 4 cut(s) 790, 1252, 1277, 1426
BspFNI CGCG 1 cut(s) 466
BspHI TCATGA 1 cut(s) 1851
BspLI GGNNCC 2 cut(s) 817, 1147
BspMAI CTGCAG 1 cut(s) 1816
BspMI ACCTGC 3 cut(s) 1043, 1379, 1688
BspPI GGATC 1 cut(s) 1571
BspQI GCTCTTC 1 cut(s) 2295
BspTNI GGTCTC 1 cut(s) 171
BsrDI GCAATG 1 cut(s) 1050
BsrGI TGTACA 3 cut(s) 863, 1299, 1803
BsrI ACTGG 2 cut(s) 843, 2015
BssECI CCNNGG 5 cut(s) 161, 1149, 1219, 1689, 1776
BssMI GATC 5 cut(s) 726, 1072, 1087, 1563, 1987
BssT1I CCWWGG 1 cut(s) 1689
Bst2UI CCWGG 3 cut(s) 163, 494, 1220
Bst4CI ACNGT 2 cut(s) 605, 1749
Bst6I CTCTTC 2 cut(s) 2071, 2295
BstAPI GCANNNNNTGC 5 cut(s) 289, 1049, 1058, 1394, 2172
BstAUI TGTACA 3 cut(s) 863, 1299, 1803
BstC8I GCNNGC 5 cut(s) 285, 597, 1419, 1591, 2237
BstDEI CTNAG 5 cut(s) 798, 904, 1239, 1264, 1413
BstF5I GGATG 5 cut(s) 64, 151, 894, 1834, 1942
BstFNI CGCG 1 cut(s) 466
BstH2I RGCGCY 1 cut(s) 2242
BstHHI GCGC 5 cut(s) 283, 1288, 1399, 2134, 2241
BstKTI GATC 5 cut(s) 729, 1075, 1090, 1566, 1990
BstMAI GTCTC 2 cut(s) 171, 1267
BstMBI GATC 5 cut(s) 726, 1072, 1087, 1563, 1987
BstNI CCWGG 3 cut(s) 163, 494, 1220
BstNSI RCATGY 2 cut(s) 599, 1804
BstSCI CCNGG 4 cut(s) 161, 492, 1148, 1218
BstSFI CTRYAG 4 cut(s) 601, 1424, 1558, 1812
BstSLI GKGCMC 1 cut(s) 300
BstUI CGCG 1 cut(s) 466
BstV1I GCAGC 3 cut(s) 1411, 1726, 2116
BstV2I GAAGAC 3 cut(s) 1089, 1714, 2049
BstXI CCANNNNNNTGG 1 cut(s) 169
BsuI GTATCC 1 cut(s) 2000
BsuRI GGCC 2 cut(s) 469, 1407
BtsCI GGATG 5 cut(s) 64, 151, 894, 1834, 1942
BtsIMutI CAGTG 1 cut(s) 850
BveI ACCTGC 3 cut(s) 1043, 1379, 1688
Cac8I GCNNGC 5 cut(s) 285, 597, 1419, 1591, 2237
CaiI CAGNNNCTG 1 cut(s) 23
CciI TCATGA 1 cut(s) 1851
CfoI GCGC 5 cut(s) 283, 1288, 1399, 2134, 2241
Cfr13I GGNCC 1 cut(s) 1579
Csp6I GTAC 6 cut(s) 568, 864, 964, 1300, 1804, 1969
CspCI CAANNNNNGTGG 2 cut(s) 1291, 1326
CviQI GTAC 6 cut(s) 568, 864, 964, 1300, 1804, 1969
DdeI CTNAG 5 cut(s) 798, 904, 1239, 1264, 1413
DpnI GATC 5 cut(s) 728, 1074, 1089, 1565, 1989
DpnII GATC 5 cut(s) 726, 1072, 1087, 1563, 1987
DraI TTTAAA 2 cut(s) 694, 1924
EaeI YGGCCR 2 cut(s) 467, 1405
Eam1104I CTCTTC 2 cut(s) 2071, 2295
EarI CTCTTC 2 cut(s) 2071, 2295
Ecl136II GAGCTC 1 cut(s) 2288
Eco130I CCWWGG 1 cut(s) 1689
Eco24I GRGCYC 1 cut(s) 2290
Eco31I GGTCTC 1 cut(s) 171
Eco32I GATATC 1 cut(s) 1368
Eco47I GGWCC 1 cut(s) 1579
Eco53kI GAGCTC 1 cut(s) 2288
Eco57I CTGAAG 2 cut(s) 69, 723
EcoICRI GAGCTC 1 cut(s) 2288
EcoRI GAATTC 2 cut(s) 53, 265
EcoRII CCWGG 3 cut(s) 161, 492, 1218
EcoRV GATATC 1 cut(s) 1368
EcoT14I CCWWGG 1 cut(s) 1689
EcoT38I GRGCYC 1 cut(s) 2290
ErhI CCWWGG 1 cut(s) 1689
FalI AAGNNNNNCTT 2 cut(s) 1074, 1106
FauI CCCGC 1 cut(s) 1247
FbaI TGATCA 1 cut(s) 1987
FblI GTMKAC 1 cut(s) 1352
Fnu4HI GCNGC 4 cut(s) 467, 1400, 1740, 2130
FokI GGATG 5 cut(s) 51, 158, 901, 1841, 1929
FriOI GRGCYC 1 cut(s) 2290
Fsp4HI GCNGC 4 cut(s) 467, 1400, 1740, 2130
FspBI CTAG 8 cut(s) 188, 536, 633, 993, 1289, 1377, 1836, 2211
FspI TGCGCA 2 cut(s) 282, 1398
GlaI GCGC 5 cut(s) 282, 1287, 1398, 2133, 2240
GluI GCNGC 4 cut(s) 467, 1400, 1740, 2130
GsaI CCCAGC 1 cut(s) 513
GsuI CTGGAG 2 cut(s) 515, 1898
HaeII RGCGCY 1 cut(s) 2242
HaeIII GGCC 2 cut(s) 469, 1407
HapII CCGG 4 cut(s) 616, 938, 1149, 1408
HhaI GCGC 5 cut(s) 283, 1288, 1399, 2134, 2241
Hin6I GCGC 5 cut(s) 281, 1286, 1397, 2132, 2239
HinP1I GCGC 5 cut(s) 281, 1286, 1397, 2132, 2239
HincII GTYRAC 1 cut(s) 1686
HindII GTYRAC 1 cut(s) 1686
HindIII AAGCTT 2 cut(s) 41, 1865
HinfI GANTC 8 cut(s) 221, 372, 683, 770, 1411, 1455, 1541, 1999
HpaII CCGG 4 cut(s) 616, 938, 1149, 1408
HphI GGTGA 3 cut(s) 770, 1165, 1852
Hpy166II GTNNAC 4 cut(s) 457, 1353, 1374, 1686
Hpy188III TCNNGA 8 cut(s) 170, 188, 1132, 1648, 1852, 1996, 2149, 2228
Hpy8I GTNNAC 4 cut(s) 457, 1353, 1374, 1686
HpyAV CCTTC 4 cut(s) 24, 944, 1819, 2252
HpyCH4III ACNGT 2 cut(s) 605, 1749
HpyCH4IV ACGT 2 cut(s) 108, 1971
HpyF3I CTNAG 5 cut(s) 798, 904, 1239, 1264, 1413
HpySE526I ACGT 2 cut(s) 108, 1971
HspAI GCGC 5 cut(s) 281, 1286, 1397, 2132, 2239
Ksp22I TGATCA 1 cut(s) 1987
Kzo9I GATC 5 cut(s) 726, 1072, 1087, 1563, 1987
LguI GCTCTTC 1 cut(s) 2295
LmnI GCTCC 5 cut(s) 881, 1151, 1873, 1887, 2285
Lsp1109I GCAGC 3 cut(s) 1411, 1726, 2116
LweI GCATC 4 cut(s) 373, 792, 879, 1254
MaeI CTAG 8 cut(s) 188, 536, 633, 993, 1289, 1377, 1836, 2211
MaeII ACGT 2 cut(s) 108, 1971
MaeIII GTNAC 3 cut(s) 334, 1471, 1532
MalI GATC 5 cut(s) 728, 1074, 1089, 1565, 1989
MboI GATC 5 cut(s) 726, 1072, 1087, 1563, 1987
MboII GAAGA 8 cut(s) 75, 392, 765, 1094, 1719, 2054, 2058, 2282
MfeI CAATTG 2 cut(s) 590, 2097
MhlI GDGCHC 2 cut(s) 300, 2290
MlyI GAGTC 4 cut(s) 1405, 1464, 1550, 2008
MmeI TCCRAC 1 cut(s) 1776
MroXI GAANNNNTTC 3 cut(s) 1230, 1959, 2266
MslI CAYNNNNRTG 1 cut(s) 1346
MspI CCGG 4 cut(s) 616, 938, 1149, 1408
MspR9I CCNGG 4 cut(s) 163, 494, 1150, 1220
MunI CAATTG 2 cut(s) 590, 2097
Mva1269I GAATGC 1 cut(s) 1045
MvaI CCWGG 3 cut(s) 163, 494, 1220
MvnI CGCG 1 cut(s) 466
NciI CCSGG 1 cut(s) 1150
NdeII GATC 5 cut(s) 726, 1072, 1087, 1563, 1987
NlaIV GGNNCC 2 cut(s) 817, 1147
NmuCI GTSAC 1 cut(s) 334
NsbI TGCGCA 2 cut(s) 282, 1398
NspI RCATGY 2 cut(s) 599, 1804
PaeI GCATGC 1 cut(s) 599
PagI TCATGA 1 cut(s) 1851
PciI ACATGT 1 cut(s) 1800
PciSI GCTCTTC 1 cut(s) 2295
PcsI WCGNNNNNNNCGW 1 cut(s) 1367
PctI GAATGC 1 cut(s) 1045
PdmI GAANNNNTTC 3 cut(s) 1230, 1959, 2266
PfeI GAWTC 4 cut(s) 221, 372, 683, 770
PfoI TCCNGGA 1 cut(s) 492
PkrI GCNGC 4 cut(s) 468, 1401, 1741, 2131
PleI GAGTC 4 cut(s) 1405, 1463, 1549, 2007
PpsI GAGTC 4 cut(s) 1405, 1463, 1549, 2007
PscI ACATGT 1 cut(s) 1800
PshBI ATTAAT 1 cut(s) 984
Psp124BI GAGCTC 1 cut(s) 2290
Psp6I CCWGG 3 cut(s) 161, 492, 1218
PspFI CCCAGC 1 cut(s) 509
PspGI CCWGG 3 cut(s) 161, 492, 1218
PspN4I GGNNCC 2 cut(s) 817, 1147
PspPI GGNCC 1 cut(s) 1579
PstI CTGCAG 1 cut(s) 1816
PstNI CAGNNNCTG 1 cut(s) 23
RsaI GTAC 6 cut(s) 569, 865, 965, 1301, 1805, 1970
RsaNI GTAC 6 cut(s) 568, 864, 964, 1300, 1804, 1969
RseI CAYNNNNRTG 1 cut(s) 1346
SacI GAGCTC 1 cut(s) 2290
SapI GCTCTTC 1 cut(s) 2295
SatI GCNGC 4 cut(s) 467, 1400, 1740, 2130
Sau3AI GATC 5 cut(s) 726, 1072, 1087, 1563, 1987
Sau96I GGNCC 1 cut(s) 1579
SchI GAGTC 4 cut(s) 1405, 1464, 1550, 2008
ScrFI CCNGG 4 cut(s) 163, 494, 1150, 1220
SduI GDGCHC 2 cut(s) 300, 2290
SfaNI GCATC 4 cut(s) 373, 792, 879, 1254
SfcI CTRYAG 4 cut(s) 601, 1424, 1558, 1812
SinI GGWCC 1 cut(s) 1579
SmiMI CAYNNNNRTG 1 cut(s) 1346
SmlI CTYRAG 3 cut(s) 850, 1177, 1754
SmoI CTYRAG 3 cut(s) 850, 1177, 1754
SpeI ACTAGT 2 cut(s) 632, 1376
SphI GCATGC 1 cut(s) 599
SsiI CCGC 3 cut(s) 466, 687, 1254
SspMI CTAG 8 cut(s) 188, 536, 633, 993, 1289, 1377, 1836, 2211
SstI GAGCTC 1 cut(s) 2290
StyD4I CCNGG 4 cut(s) 161, 492, 1148, 1218
StyI CCWWGG 1 cut(s) 1689
TaaI ACNGT 2 cut(s) 605, 1749
TaiI ACGT 2 cut(s) 111, 1974
TaqI TCGA 2 cut(s) 399, 2227
TatI WGTACW 4 cut(s) 567, 863, 1299, 1803
TauI GCSGC 1 cut(s) 469
TfiI GAWTC 4 cut(s) 221, 372, 683, 770
TscAI CASTG 1 cut(s) 850
TseFI GTSAC 1 cut(s) 334
TseI GCWGC 3 cut(s) 1399, 1739, 2129
Tsp45I GTSAC 1 cut(s) 334
TspRI CASTG 1 cut(s) 850
VpaK11BI GGWCC 1 cut(s) 1579
VspI ATTAAT 1 cut(s) 984
XapI RAATTY 3 cut(s) 53, 265, 2217
XbaI TCTAGA 1 cut(s) 187
XceI RCATGY 2 cut(s) 599, 1804
XcmI CCANNNNNNNNNTGG 1 cut(s) 139
XmiI GTMKAC 1 cut(s) 1352
XmnI GAANNNNTTC 3 cut(s) 1230, 1959, 2266
XspI CTAG 8 cut(s) 188, 536, 633, 993, 1289, 1377, 1836, 2211
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.