RchiOBHm_Chr7g0233371

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0016862
Physical Location & Seq
Reverse (-)
57778832 .. 57781941
3110 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ20918

Sequence Viewer

Length: 2295 bp
ATGGCTTCTCTACCTTCAGTTGCTGTTAGTGGCAATATCAAGCTTGACCAAGACTTCAGAAAACACCCCACAAGTTTTATTTCTTCCGAAAAGAGTGGAATTGCAAACGTGTCTTATCAGAAAAGTCAGACCATCGTAAATTCGGATGGAAGTTCAGAACCCAGGTCTCTGGACTTCCGAGAAGCTCTTGTGATGATTCGAGAGGGTTCTAAGGTTGAGTCCTCTTACTATGTCCCTCTCTTGCAAGAATGTATAGACCGGAATTCGGCCTCCGATGCGCAAGTTGTGCATGGCCACATCATTAAGACAGGAAGCCACCAAGATTTGTTTGTCACAACTTTCCTTGTCAATGTTTATGCAAAGTGTAGAATCATGGAAAATGCTCGTAAAGTTTTTGACAAATTGTCTCGAAGAAATGTTGTTTCGTGGACAGCTTTGATGTCGGGTTATGTTCACAATTCGCGGCCAGAACTTTCCATTCGGGTTTTCCTAGAAATGTTGGAGGCTGGGGCTTATCCTACCAATTACACTCTAGGAATTGTTTTGAATGCTTCTTCTACCTTGTACTCGATTGAGTTAGGGAAGCAATTGCATGCCTACAGCATCAAATACCAGATTGACTTTGATACCAGTATTGGAAACTCTCTTTGCAGTTTATACTCCAAATGTGGAAACTTGGAATCTGCTTTTAAAGCATTTAAGAAAATTAAGGAAAAGAATGTGATCTCTTGGACTTCAGCTATATCTGCCTGTGGTGATAATGGAGATGCTTCAAAGGGTTTGGCATTTTTCACTGAAATGCTTTCGGAGGGAATCGAGCCTAATGAGTACACCCTGACCAGTGCCTTGAGCTTGTGTTGTACAATGCTGTCTTTGGGTGCAGGGATACAAATCCATTCCTTAGTCATTAAACTTGGCTATGAATTGAACCTTCCAGTGAGAAATGCAATCATGTATTTGTACCTCAAATGTGGCATGGTAAATGAGGCTAGAAAGTTGTTTAATGGAATGGAAGCTATGAGCTTGATTACATGGAATGCAATGATTGCAGGCCATGCCCAAATTATTGATCTTGCAGAAGATGATCTTTCAGCATACCAAAGTGGAACTGAAGCACTTAACATTTTCTTGAAATTGAATCGCTCTGGGGTAAAACCTGATTTATTCACCTTCTCAAGTATCTTAACTGTATGTAGTAGTATGGTGGCTTTAGAACAGGGAGAACAGGTTCATGCTCAGAGCATTAAAAGCGGGTTTCTCTCAGATATTGTAGTAGCGACTGCGCTAGTCAATATGTACAATAAATGTGGAAGCATTGAGAAAGCAAGTAAAGTTTTCATAGAGATGTCTACAAGAACGTTGATATCATGGACTAGTATGATTGCAGGTTTTGCACAGCATGGCCGGACTCAGCAAGCACTGCAGCTCTTTGAGGATATGAGAATTGCAGGAGTTAGACCAAATCAGGTTACTTTTGTGAGTGTTCTATCAGCTTGTAGCCATGCTGGAATGGTCAATGAAGCACTTGGTTACTTTGAGTCCATGAAAAAGGACTACAGGATCAAACCAGTGATGGACCATTATGCCTGCTTGATTGATATGTTCGTGAGGTTGGGTCGGTTAGATGAAGCCTTTGGTCTTGTCAAAAAAATGGATTTTGAACCGAATGAGTTTATATGGTCAACCTTGGTTGCAGGTTGTAGAACTCATGGGAATTTAGATAGGGGATTTTATGCTGCTGAACGGTTGCTCAAACTCAAACCAAAAGATACAGAGACTTATGTCATGTTGTTGAACATGTACATCTCTGTAGAAAGATGGAAGGATGTATCTAGGGTGAGAAAAATGATGAAAGAGGAGAAGCTTGGGAAGCTAGAGGAGTGGAGCTGGATTACCATTAAAGACAAGGTTCATTCATTCAAACCCAATGATAAATCTCATCCTCAAAGTGAAGATGTTCAAAAATACGTTGAAAGTTTGACTGATCAAGTCAAGAGTCTTGGATACAAGGCAGTAGAAAGTTTGGAATTAACTGATGAAGACGCAGAAACGACTTTATTCTCTTCTACATCTTTCCACAGTGAAAAGTTGGCAATTGCTTTTGGATTGTTGAACACGCCAAATGCTGCGCCAATTCGGGTCATCAAGAATATCAGTATGTGCAGGGATTGCCATAATTTTGTTAAGTTCATATCATTACTGACTTCTAGGGAAATAATCATTCGAGATAGCAAGTGCCTTCACAAGTTTGTGAATGGAAAATGTTCATGTGGGGATTTTGGAGCTCTTCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR PPR_2

Protein Analysis

764

Amino Acids

85.31

Weight (kDa)

7.77

Isoelectric Point (pI)

34.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 138 - 184 1.5e-08 PPR repeat family
PPR_2 PF13041 239 - 287 4e-09 PPR repeat family
PPR_2 PF13041 454 - 500 2.4e-11 PPR repeat family
PPR PF01535 455 - 484 1.1e-06 PPR repeat
PPR_long PF17177 470 - 575 5.5e-06 Pentacotripeptide-repeat region of PRORP
PPR_3 PF13812 476 - 536 1.1e-07 Pentatricopeptide repeat domain
E_motif PF20431 570 - 631 6.2e-12 E motif
DYW_deaminase PF14432 679 - 760 7e-28 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0016862)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g33990
malus_domestica MD15G1390700.v1.1
prunus_persica Prupe.1G539500_v2.0.a1
pyrus_communis pycom15g34980
rosa_chinensis RchiOBHm_Chr7g0233371
rosa_laevigata RLG00000001274
rosa_multiflora Rmu_sc0008806.1_g000005
rosa_roxburghii Rroxscaffold_3G00227330
rosa_rugosa Rorug07G0280500
rosa_samantha Rh7BG409100 Rh7CG455500
rosa_wichuraiana Rw0G022470 Rw7G035890 Rw7G035930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 279
Acc36I ACCTGC 2 cut(s) 1376, 1685
AccI GTMKAC 1 cut(s) 1349
AccII CGCG 1 cut(s) 463
AciI CCGC 2 cut(s) 463, 1251
AclI AACGTT 1 cut(s) 1358
AclWI GGATC 1 cut(s) 1568
AcoI YGGCCR 3 cut(s) 292, 464, 1402
AcsI RAATTY 3 cut(s) 139, 262, 1714
AcuI CTGAAG 3 cut(s) 40, 720, 1131
AfaI GTAC 6 cut(s) 566, 830, 862, 962, 1298, 1802
AfiI CCNNNNNNNGG 1 cut(s) 265
AflIII ACRYGT 2 cut(s) 108, 1797
AhdI GACNNNNNGTC 1 cut(s) 403
AhlI ACTAGT 1 cut(s) 1373
AjnI CCWGG 1 cut(s) 161
AloI GAACNNNNNNTCC 2 cut(s) 1212, 1244
Alw21I GWGCWC 1 cut(s) 2287
Alw26I GTCTC 3 cut(s) 171, 411, 1769
AlwI GGATC 1 cut(s) 1568
AlwNI CAGNNNCTG 1 cut(s) 23
AoxI GGCC 5 cut(s) 267, 292, 464, 1051, 1402
ApeKI GCWGC 3 cut(s) 1423, 1736, 2126
ApoI RAATTY 3 cut(s) 139, 262, 1714
Asp700I GAANNNNTTC 3 cut(s) 1227, 1956, 2263
AspLEI GCGC 3 cut(s) 280, 1285, 2131
AspS9I GGNCC 1 cut(s) 1576
AsuHPI GGTGA 3 cut(s) 767, 1159, 1849
AvaII GGWCC 1 cut(s) 1576
BalI TGGCCA 1 cut(s) 294
BanII GRGCYC 1 cut(s) 2287
BbsI GAAGAC 1 cut(s) 2046
Bbv12I GWGCWC 1 cut(s) 2287
BbvI GCAGC 3 cut(s) 1435, 1723, 2113
BccI CCATC 4 cut(s) 140, 140, 1567, 1812
BciT130I CCWGG 1 cut(s) 163
BciVI GTATCC 2 cut(s) 879, 1997
BclI TGATCA 1 cut(s) 1984
BcoDI GTCTC 3 cut(s) 171, 411, 1769
BcuI ACTAGT 1 cut(s) 1373
BfaI CTAG 8 cut(s) 491, 533, 990, 1286, 1374, 1833, 1874, 2208
BfmI CTRYAG 4 cut(s) 598, 1421, 1555, 1809
BfuAI ACCTGC 2 cut(s) 1376, 1685
BfuI GTATCC 2 cut(s) 879, 1997
BisI GCNGC 4 cut(s) 464, 1424, 1737, 2127
BlsI GCNGC 4 cut(s) 465, 1425, 1738, 2128
Bme1390I CCNGG 1 cut(s) 163
Bme18I GGWCC 1 cut(s) 1576
BmeRI GACNNNNNGTC 1 cut(s) 403
BmgT120I GGNCC 1 cut(s) 1576
BmrFI CCNGG 1 cut(s) 163
BmsI GCATC 3 cut(s) 265, 612, 757
BoxI GACNNNNGTC 1 cut(s) 1781
BpiI GAAGAC 1 cut(s) 2046
BpuEI CTTGAG 2 cut(s) 868, 1159
BsaBI GATNNNNATC 1 cut(s) 890
BsaI GGTCTC 1 cut(s) 171
BsaJI CCNNGG 2 cut(s) 161, 1686
BsaWI WCCGGW 1 cut(s) 258
BsaXI ACNNNNNCTCC 2 cut(s) 1212, 1242
Bsc4I CCNNNNNNNGG 1 cut(s) 265
Bse1I ACTGG 4 cut(s) 630, 840, 935, 1568
Bse3DI GCAATG 1 cut(s) 1047
Bse8I GATNNNNATC 1 cut(s) 890
BseBI CCWGG 1 cut(s) 163
BseDI CCNNGG 2 cut(s) 161, 1686
BseGI GGATG 3 cut(s) 151, 1831, 1939
BseJI GATNNNNATC 1 cut(s) 890
BseLI CCNNNNNNNGG 1 cut(s) 265
BseMI GCAATG 1 cut(s) 1047
BseMII CTCAG 3 cut(s) 1250, 1275, 1424
BseNI ACTGG 4 cut(s) 630, 840, 935, 1568
BseRI GAGGAG 2 cut(s) 1871, 1892
BseXI GCAGC 3 cut(s) 1435, 1723, 2113
BseYI CCCAGC 1 cut(s) 506
BsgI GTGCAG 2 cut(s) 900, 2182
Bsh1236I CGCG 1 cut(s) 463
BshFI GGCC 5 cut(s) 269, 294, 466, 1053, 1404
BsiHKAI GWGCWC 1 cut(s) 2287
BsiSI CCGG 2 cut(s) 259, 1405
BslFI GGGAC 1 cut(s) 218
BslI CCNNNNNNNGG 1 cut(s) 265
BsmAI GTCTC 3 cut(s) 171, 411, 1769
BsmFI GGGAC 1 cut(s) 218
BsmI GAATGC 2 cut(s) 553, 1042
BsnI GGCC 5 cut(s) 269, 294, 466, 1053, 1404
Bso31I GGTCTC 1 cut(s) 171
Bsp1286I GDGCHC 1 cut(s) 2287
Bsp1407I TGTACA 3 cut(s) 860, 1296, 1800
Bsp143I GATC 5 cut(s) 723, 1069, 1084, 1560, 1984
BspACI CCGC 2 cut(s) 463, 1251
BspANI GGCC 5 cut(s) 269, 294, 466, 1053, 1404
BspCNI CTCAG 3 cut(s) 1249, 1274, 1423
BspFNI CGCG 1 cut(s) 463
BspMAI CTGCAG 1 cut(s) 1425
BspMI ACCTGC 2 cut(s) 1376, 1685
BspPI GGATC 1 cut(s) 1568
BspQI GCTCTTC 1 cut(s) 2292
BspTNI GGTCTC 1 cut(s) 171
BsrDI GCAATG 1 cut(s) 1047
BsrGI TGTACA 3 cut(s) 860, 1296, 1800
BsrI ACTGG 4 cut(s) 630, 840, 935, 1568
BssECI CCNNGG 2 cut(s) 161, 1686
BssMI GATC 5 cut(s) 723, 1069, 1084, 1560, 1984
BssT1I CCWWGG 1 cut(s) 1686
Bst2UI CCWGG 1 cut(s) 163
Bst4CI ACNGT 3 cut(s) 1189, 1746, 2081
Bst6I CTCTTC 2 cut(s) 2068, 2292
BstAPI GCANNNNNTGC 6 cut(s) 286, 1046, 1055, 1391, 1420, 2169
BstAUI TGTACA 3 cut(s) 860, 1296, 1800
BstC8I GCNNGC 4 cut(s) 594, 1051, 1416, 1588
BstDEI CTNAG 5 cut(s) 210, 901, 1236, 1261, 1410
BstF5I GGATG 3 cut(s) 151, 1831, 1939
BstFNI CGCG 1 cut(s) 463
BstHHI GCGC 3 cut(s) 280, 1285, 2131
BstKTI GATC 5 cut(s) 726, 1072, 1087, 1563, 1987
BstMAI GTCTC 3 cut(s) 171, 411, 1769
BstMBI GATC 5 cut(s) 723, 1069, 1084, 1560, 1984
BstNI CCWGG 1 cut(s) 163
BstNSI RCATGY 2 cut(s) 596, 1801
BstPAI GACNNNNGTC 1 cut(s) 1781
BstSCI CCNGG 1 cut(s) 161
BstSFI CTRYAG 4 cut(s) 598, 1421, 1555, 1809
BstUI CGCG 1 cut(s) 463
BstV1I GCAGC 3 cut(s) 1435, 1723, 2113
BstV2I GAAGAC 1 cut(s) 2046
BstXI CCANNNNNNTGG 1 cut(s) 169
BsuI GTATCC 2 cut(s) 879, 1997
BsuRI GGCC 5 cut(s) 269, 294, 466, 1053, 1404
BtsCI GGATG 3 cut(s) 151, 1831, 1939
BtsI GCAGTG 1 cut(s) 1418
BtsIMutI CAGTG 6 cut(s) 792, 847, 942, 1418, 1575, 2086
BveI ACCTGC 2 cut(s) 1376, 1685
Cac8I GCNNGC 4 cut(s) 594, 1051, 1416, 1588
CaiI CAGNNNCTG 1 cut(s) 23
CfoI GCGC 3 cut(s) 280, 1285, 2131
Cfr13I GGNCC 1 cut(s) 1576
CseI GACGC 1 cut(s) 2051
Csp6I GTAC 6 cut(s) 565, 829, 861, 961, 1297, 1801
CspCI CAANNNNNGTGG 2 cut(s) 1288, 1323
CviQI GTAC 6 cut(s) 565, 829, 861, 961, 1297, 1801
DdeI CTNAG 5 cut(s) 210, 901, 1236, 1261, 1410
DpnI GATC 5 cut(s) 725, 1071, 1086, 1562, 1986
DpnII GATC 5 cut(s) 723, 1069, 1084, 1560, 1984
DraI TTTAAA 1 cut(s) 691
DriI GACNNNNNGTC 1 cut(s) 403
EaeI YGGCCR 3 cut(s) 292, 464, 1402
Eam1104I CTCTTC 2 cut(s) 2068, 2292
Eam1105I GACNNNNNGTC 1 cut(s) 403
EarI CTCTTC 2 cut(s) 2068, 2292
Ecl136II GAGCTC 1 cut(s) 2285
Eco130I CCWWGG 1 cut(s) 1686
Eco24I GRGCYC 1 cut(s) 2287
Eco31I GGTCTC 1 cut(s) 171
Eco32I GATATC 1 cut(s) 1365
Eco47I GGWCC 1 cut(s) 1576
Eco53kI GAGCTC 1 cut(s) 2285
Eco57I CTGAAG 3 cut(s) 40, 720, 1131
EcoICRI GAGCTC 1 cut(s) 2285
EcoRI GAATTC 1 cut(s) 262
EcoRII CCWGG 1 cut(s) 161
EcoRV GATATC 1 cut(s) 1365
EcoT14I CCWWGG 1 cut(s) 1686
EcoT38I GRGCYC 1 cut(s) 2287
ErhI CCWWGG 1 cut(s) 1686
FalI AAGNNNNNCTT 2 cut(s) 1071, 1103
FaqI GGGAC 1 cut(s) 218
FauI CCCGC 1 cut(s) 1244
FbaI TGATCA 1 cut(s) 1984
FblI GTMKAC 1 cut(s) 1349
Fnu4HI GCNGC 4 cut(s) 464, 1424, 1737, 2127
FokI GGATG 3 cut(s) 158, 1838, 1926
FriOI GRGCYC 1 cut(s) 2287
Fsp4HI GCNGC 4 cut(s) 464, 1424, 1737, 2127
FspBI CTAG 8 cut(s) 491, 533, 990, 1286, 1374, 1833, 1874, 2208
FspI TGCGCA 1 cut(s) 279
GlaI GCGC 3 cut(s) 279, 1284, 2130
GluI GCNGC 4 cut(s) 464, 1424, 1737, 2127
GsaI CCCAGC 1 cut(s) 510
HaeIII GGCC 5 cut(s) 269, 294, 466, 1053, 1404
HapII CCGG 2 cut(s) 259, 1405
HgaI GACGC 1 cut(s) 2051
HhaI GCGC 3 cut(s) 280, 1285, 2131
Hin6I GCGC 3 cut(s) 278, 1283, 2129
HinP1I GCGC 3 cut(s) 278, 1283, 2129
HincII GTYRAC 1 cut(s) 1683
HindII GTYRAC 1 cut(s) 1683
HindIII AAGCTT 2 cut(s) 41, 1862
HinfI GANTC 9 cut(s) 196, 218, 369, 680, 813, 1138, 1408, 1538, 1996
HpaII CCGG 2 cut(s) 259, 1405
HphI GGTGA 3 cut(s) 767, 1159, 1849
Hpy166II GTNNAC 5 cut(s) 429, 454, 831, 1350, 1683
Hpy188III TCNNGA 8 cut(s) 170, 200, 408, 1129, 1606, 1993, 2146, 2225
Hpy8I GTNNAC 5 cut(s) 429, 454, 831, 1350, 1683
HpyAV CCTTC 5 cut(s) 24, 941, 1180, 1816, 2249
HpyCH4III ACNGT 3 cut(s) 1189, 1746, 2081
HpyCH4IV ACGT 3 cut(s) 108, 1358, 1968
HpyF3I CTNAG 5 cut(s) 210, 901, 1236, 1261, 1410
HpySE526I ACGT 3 cut(s) 108, 1358, 1968
HspAI GCGC 3 cut(s) 278, 1283, 2129
Ksp22I TGATCA 1 cut(s) 1984
Kzo9I GATC 5 cut(s) 723, 1069, 1084, 1560, 1984
LguI GCTCTTC 1 cut(s) 2292
LmnI GCTCC 2 cut(s) 1884, 2282
Lsp1109I GCAGC 3 cut(s) 1435, 1723, 2113
LweI GCATC 3 cut(s) 265, 612, 757
MaeI CTAG 8 cut(s) 491, 533, 990, 1286, 1374, 1833, 1874, 2208
MaeII ACGT 3 cut(s) 108, 1358, 1968
MaeIII GTNAC 3 cut(s) 331, 1468, 1529
MalI GATC 5 cut(s) 725, 1071, 1086, 1562, 1986
MboI GATC 5 cut(s) 723, 1069, 1084, 1560, 1984
MboII GAAGA 8 cut(s) 75, 423, 546, 1091, 1964, 2051, 2055, 2279
MfeI CAATTG 2 cut(s) 587, 2094
MhlI GDGCHC 1 cut(s) 2287
MlsI TGGCCA 1 cut(s) 294
MluNI TGGCCA 1 cut(s) 294
MlyI GAGTC 4 cut(s) 227, 1402, 1547, 2005
MmeI TCCRAC 1 cut(s) 480
Mox20I TGGCCA 1 cut(s) 294
MroXI GAANNNNTTC 3 cut(s) 1227, 1956, 2263
MscI TGGCCA 1 cut(s) 294
MslI CAYNNNNRTG 2 cut(s) 797, 1343
Msp20I TGGCCA 1 cut(s) 294
MspI CCGG 2 cut(s) 259, 1405
MspR9I CCNGG 1 cut(s) 163
MunI CAATTG 2 cut(s) 587, 2094
Mva1269I GAATGC 2 cut(s) 553, 1042
MvaI CCWGG 1 cut(s) 163
MvnI CGCG 1 cut(s) 463
NdeII GATC 5 cut(s) 723, 1069, 1084, 1560, 1984
NmuCI GTSAC 1 cut(s) 331
NsbI TGCGCA 1 cut(s) 279
NspI RCATGY 2 cut(s) 596, 1801
PaeI GCATGC 1 cut(s) 596
PciI ACATGT 1 cut(s) 1797
PciSI GCTCTTC 1 cut(s) 2292
PctI GAATGC 2 cut(s) 553, 1042
PdmI GAANNNNTTC 3 cut(s) 1227, 1956, 2263
PfeI GAWTC 5 cut(s) 196, 369, 680, 813, 1138
PkrI GCNGC 4 cut(s) 465, 1425, 1738, 2128
PleI GAGTC 4 cut(s) 226, 1402, 1546, 2004
PpsI GAGTC 4 cut(s) 226, 1402, 1546, 2004
PscI ACATGT 1 cut(s) 1797
PshAI GACNNNNGTC 1 cut(s) 1781
Psp124BI GAGCTC 1 cut(s) 2287
Psp1406I AACGTT 1 cut(s) 1358
Psp6I CCWGG 1 cut(s) 161
PspFI CCCAGC 1 cut(s) 506
PspGI CCWGG 1 cut(s) 161
PspPI GGNCC 1 cut(s) 1576
PstI CTGCAG 1 cut(s) 1425
PstNI CAGNNNCTG 1 cut(s) 23
RsaI GTAC 6 cut(s) 566, 830, 862, 962, 1298, 1802
RsaNI GTAC 6 cut(s) 565, 829, 861, 961, 1297, 1801
RseI CAYNNNNRTG 2 cut(s) 797, 1343
SacI GAGCTC 1 cut(s) 2287
SapI GCTCTTC 1 cut(s) 2292
SatI GCNGC 4 cut(s) 464, 1424, 1737, 2127
Sau3AI GATC 5 cut(s) 723, 1069, 1084, 1560, 1984
Sau96I GGNCC 1 cut(s) 1576
SchI GAGTC 4 cut(s) 227, 1402, 1547, 2005
ScrFI CCNGG 1 cut(s) 163
SduI GDGCHC 1 cut(s) 2287
SfaNI GCATC 3 cut(s) 265, 612, 757
SfcI CTRYAG 4 cut(s) 598, 1421, 1555, 1809
SinI GGWCC 1 cut(s) 1576
SmiMI CAYNNNNRTG 2 cut(s) 797, 1343
SmlI CTYRAG 2 cut(s) 847, 1174
SmoI CTYRAG 2 cut(s) 847, 1174
SpeI ACTAGT 1 cut(s) 1373
SphI GCATGC 1 cut(s) 596
SsiI CCGC 2 cut(s) 463, 1251
SspMI CTAG 8 cut(s) 491, 533, 990, 1286, 1374, 1833, 1874, 2208
SstI GAGCTC 1 cut(s) 2287
StyD4I CCNGG 1 cut(s) 161
StyI CCWWGG 1 cut(s) 1686
TaaI ACNGT 3 cut(s) 1189, 1746, 2081
TaiI ACGT 3 cut(s) 111, 1361, 1971
TaqI TCGA 5 cut(s) 199, 409, 569, 816, 2224
TatI WGTACW 5 cut(s) 564, 828, 860, 1296, 1800
TauI GCSGC 1 cut(s) 466
TfiI GAWTC 5 cut(s) 196, 369, 680, 813, 1138
TscAI CASTG 6 cut(s) 799, 847, 942, 1425, 1575, 2086
TseFI GTSAC 1 cut(s) 331
TseI GCWGC 3 cut(s) 1423, 1736, 2126
Tsp45I GTSAC 1 cut(s) 331
TspRI CASTG 6 cut(s) 799, 847, 942, 1425, 1575, 2086
VpaK11BI GGWCC 1 cut(s) 1576
XapI RAATTY 3 cut(s) 139, 262, 1714
XceI RCATGY 2 cut(s) 596, 1801
XmiI GTMKAC 1 cut(s) 1349
XmnI GAANNNNTTC 3 cut(s) 1227, 1956, 2263
XspI CTAG 8 cut(s) 491, 533, 990, 1286, 1374, 1833, 1874, 2208
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.