FvH4_5g37380
ERF Family

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Reverse (-)
27482815 .. 27486346
3532 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g37380.t2

Sequence Viewer

Length: 1389 bp
ATGGTACCATTCCTTCACAAATTTTTTCCGTCCGTGCTGAGGAAGGCATCACAGACCAAACCAAACATTTACTGTGTGTATGATAGTCAGCTTTTGACATCGTTCACATCCTCTCTCTACTTAGCTGGTTTGGCTGCATCGCTTGTGGCGAGCCGTCTCGCCAAGATTATAGGCCGGAGGAACATCATGCTCTTGGGTGGTTCTACCTTCCTCGTTGGCTCTGCTCTAAATGGTGGAGCTGTTAATGTTGCCATGCTTATCTTGGGTCGTATCTTGCTAGGGTTTGGAGTTGGTTTCACTAACCAATCTGCCCCCATCTACCTCTCCGAAGTCGCACCACCAAAATGGCGCGGAGCCTTCAGCACCGGCTTCCAGTTCTTCATTGGAATCGGCGTCCTTGCCGCCAACTGCATAAACTATGCCACCGCCAAGCAAGAACACGGCTGGCGTATCTCCCTTGGCCTTGCCATAGTCCCAGCTGCCATAATGACCTTTGGTGCACTCTTCATTACCGACTCTCCCTCCAGCCTAGTCCAACGCAACAAGTTCGAGCAAGCCAAGAAAGCCCTAATCAACATCCGAGGAAAAGATACAGACATCGAACCAGAGCTGGCTCTTCTCATTAAAAATAGTGAAATTGCCAAAGCTATCGATGAGGAGCCATTTATGACTATATTTCAGAGACAGTACAGGCCTCAACTTGTGATCGGAATGATCGCCATTCCGTTTTTCCAGCAAGTGACTGGGATCAACATCATTGCATTTTACGCGCCGGTGCTGTTTCAGTCAGTCGGATTTGGAAATGATTCTGCCCTGATTGCGGCCATCATACTCGGAATGGTTAATATCGTTTCGATTCTTGTGTCTACTTATACGGTTGATAGGTACGGGAGGAGATTTTTGTTCATGGAAGGTGGTATCCAAATGTTCATTACTCAGGTCGGGGTGGCTATTGTTCTAGCAATTACAACAGGTACTGACGGCACCAAGCATATTTCAAAGGGATATGCCATACTAGTCCTAGTGTTGATGTGTTTATATGCTGCCGGTTTTGGTTGGTCATGGGGACCTTTGAGCTGGCTCATACCAAGTGAGATATTCCCCATGAAGATCCGATCCACAGGCCAGAGCATGGGGCTTGCTATGAACTTTGCAACCACATTTGTGTTGTCGCAAACCTTCTTGTCAATGTTGTGTCATTTCAAATATGGCACATTCCTATTCTATGGAGCTTGGATATTCGCCATGACCATTTTTGTCGCACTGTTCTTGCCGGAAACTAAAGGAATACCACTGGACTCGGTGCATACAGTGTGGGAGAAGCACTGGTATTGGCGTCGGTTTGTTCAGAGTAGTATACCGGAGGACACTATCAATCATGAATATTAA

Protein Analysis

463

Amino Acids

51.02

Weight (kDa)

9.43

Isoelectric Point (pI)

44.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sugar_tr PF00083 28 - 489 3.1e-109 Sugar (and other) transporter
MFS_1 PF07690 82 - 432 1.8e-27 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 4
AccB1I GGYRCC 2 cut(s) 4, 983
AccB7I CCANNNNNTGG 1 cut(s) 1132
AccI GTMKAC 2 cut(s) 866, 1357
AccII CGCG 2 cut(s) 351, 770
AciI CCGC 4 cut(s) 351, 402, 426, 821
AclWI GGATC 3 cut(s) 755, 1105, 1110
AcoI YGGCCR 1 cut(s) 822
AcsI RAATTY 1 cut(s) 20
AcuI CTGAAG 1 cut(s) 343
AcyI GRCGYC 2 cut(s) 393, 1336
AfaI GTAC 4 cut(s) 6, 689, 887, 976
AfiI CCNNNNNNNGG 3 cut(s) 39, 820, 1132
AgsI TTSAA 2 cut(s) 999, 1204
AhlI ACTAGT 1 cut(s) 1015
AleI CACNNNNGTG 1 cut(s) 1163
AluBI AGCT 8 cut(s) 91, 125, 239, 479, 610, 647, 1077, 1232
AluI AGCT 8 cut(s) 91, 125, 239, 479, 610, 647, 1077, 1232
Alw21I GWGCWC 1 cut(s) 502
Alw26I GTCTC 2 cut(s) 161, 676
Alw44I GTGCAC 1 cut(s) 498
AlwI GGATC 3 cut(s) 755, 1105, 1110
AlwNI CAGNNNCTG 1 cut(s) 977
AoxI GGCC 5 cut(s) 172, 460, 692, 822, 1123
ApaLI GTGCAC 1 cut(s) 498
ApeKI GCWGC 3 cut(s) 134, 479, 1043
ApoI RAATTY 1 cut(s) 20
Asp700I GAANNNNTTC 1 cut(s) 805
Asp718I GGTACC 1 cut(s) 4
AspLEI GCGC 2 cut(s) 351, 772
AspS9I GGNCC 1 cut(s) 1067
AvaII GGWCC 1 cut(s) 1067
BaeGI GKGCMC 1 cut(s) 502
BanI GGYRCC 2 cut(s) 4, 983
BarI GAAGNNNNNNTAC 1 cut(s) 29
Bbv12I GWGCWC 1 cut(s) 502
BbvCI CCTCAGC 1 cut(s) 38
BbvI GCAGC 3 cut(s) 121, 466, 1030
BccI CCATC 2 cut(s) 323, 833
BceAI ACGGC 3 cut(s) 138, 457, 997
BcgI CGANNNNNNTGC 2 cut(s) 529, 563
BciVI GTATCC 1 cut(s) 929
BcoDI GTCTC 2 cut(s) 161, 676
BcuI ACTAGT 1 cut(s) 1015
BfaI CTAG 5 cut(s) 278, 530, 959, 1016, 1022
BfuI GTATCC 1 cut(s) 929
BisI GCNGC 5 cut(s) 135, 402, 480, 822, 1044
BlsI GCNGC 5 cut(s) 136, 403, 481, 823, 1045
Bme18I GGWCC 1 cut(s) 1067
BmgT120I GGNCC 1 cut(s) 1067
BmiI GGNNCC 5 cut(s) 6, 355, 660, 985, 1068
BmrI ACTGGG 1 cut(s) 753
BmsI GCATC 2 cut(s) 56, 146
BmuI ACTGGG 1 cut(s) 753
BpmI CTGGAG 1 cut(s) 508
Bpu10I CCTNAGC 1 cut(s) 38
Bsa29I ATCGAT 1 cut(s) 651
BsaBI GATNNNNATC 1 cut(s) 752
BsaHI GRCGYC 2 cut(s) 393, 1336
BsaJI CCNNGG 2 cut(s) 457, 580
BsaWI WCCGGW 1 cut(s) 1360
BsaXI ACNNNNNCTCC 4 cut(s) 502, 506, 532, 536
Bsc4I CCNNNNNNNGG 3 cut(s) 39, 820, 1132
Bse118I RCCGGY 3 cut(s) 365, 772, 1046
Bse1I ACTGG 4 cut(s) 373, 748, 1299, 1331
Bse3DI GCAATG 1 cut(s) 756
Bse8I GATNNNNATC 1 cut(s) 752
BseCI ATCGAT 1 cut(s) 651
BseDI CCNNGG 2 cut(s) 457, 580
BseGI GGATG 2 cut(s) 107, 576
BseJI GATNNNNATC 1 cut(s) 752
BseLI CCNNNNNNNGG 3 cut(s) 39, 820, 1132
BseMI GCAATG 1 cut(s) 756
BseMII CTCAG 2 cut(s) 29, 950
BseNI ACTGG 4 cut(s) 373, 748, 1299, 1331
BseRI GAGGAG 2 cut(s) 671, 907
BseSI GKGCMC 1 cut(s) 502
BseXI GCAGC 3 cut(s) 121, 466, 1030
BseYI CCCAGC 1 cut(s) 475
Bsh1236I CGCG 2 cut(s) 351, 770
BshFI GGCC 5 cut(s) 174, 462, 694, 824, 1125
BshNI GGYRCC 2 cut(s) 4, 983
BshVI ATCGAT 1 cut(s) 651
BsiHKAI GWGCWC 1 cut(s) 502
BsiSI CCGG 6 cut(s) 175, 366, 773, 1047, 1274, 1361
BslFI GGGAC 2 cut(s) 458, 1080
BslI CCNNNNNNNGG 3 cut(s) 39, 820, 1132
BsmAI GTCTC 2 cut(s) 161, 676
BsmBI CGTCTC 1 cut(s) 161
BsmFI GGGAC 2 cut(s) 458, 1080
BsnI GGCC 5 cut(s) 174, 462, 694, 824, 1125
Bsp1286I GDGCHC 1 cut(s) 502
Bsp143I GATC 5 cut(s) 705, 714, 747, 1110, 1115
BspACI CCGC 4 cut(s) 351, 402, 426, 821
BspANI GGCC 5 cut(s) 174, 462, 694, 824, 1125
BspCNI CTCAG 2 cut(s) 30, 949
BspDI ATCGAT 1 cut(s) 651
BspFNI CGCG 2 cut(s) 351, 770
BspHI TCATGA 1 cut(s) 1378
BspLI GGNNCC 5 cut(s) 6, 355, 660, 985, 1068
BspPI GGATC 3 cut(s) 755, 1105, 1110
BspQI GCTCTTC 1 cut(s) 621
BspT107I GGYRCC 2 cut(s) 4, 983
BsrDI GCAATG 1 cut(s) 756
BsrFI RCCGGY 3 cut(s) 365, 772, 1046
BsrI ACTGG 4 cut(s) 373, 748, 1299, 1331
BssAI RCCGGY 3 cut(s) 365, 772, 1046
BssECI CCNNGG 2 cut(s) 457, 580
BssMI GATC 5 cut(s) 705, 714, 747, 1110, 1115
BssNAI GTATAC 1 cut(s) 1358
BssNI GRCGYC 2 cut(s) 393, 1336
BssT1I CCWWGG 1 cut(s) 457
Bst1107I GTATAC 1 cut(s) 1358
Bst4CI ACNGT 5 cut(s) 74, 687, 877, 1266, 1312
Bst6I CTCTTC 2 cut(s) 509, 621
BstACI GRCGYC 2 cut(s) 393, 1336
BstC8I GCNNGC 6 cut(s) 151, 446, 555, 612, 1079, 1140
BstDEI CTNAG 3 cut(s) 38, 121, 936
BstF5I GGATG 2 cut(s) 107, 576
BstFNI CGCG 2 cut(s) 351, 770
BstHHI GCGC 2 cut(s) 351, 772
BstKTI GATC 5 cut(s) 708, 717, 750, 1113, 1118
BstMAI GTCTC 2 cut(s) 161, 676
BstMBI GATC 5 cut(s) 705, 714, 747, 1110, 1115
BstMWI GCNNNNNNNGC 4 cut(s) 131, 563, 767, 818
BstSLI GKGCMC 1 cut(s) 502
BstUI CGCG 2 cut(s) 351, 770
BstV1I GCAGC 3 cut(s) 121, 466, 1030
BstX2I RGATCY 1 cut(s) 1110
BstXI CCANNNNNNTGG 1 cut(s) 345
BstYI RGATCY 1 cut(s) 1110
BstZ17I GTATAC 1 cut(s) 1358
Bsu15I ATCGAT 1 cut(s) 651
BsuI GTATCC 1 cut(s) 929
BsuRI GGCC 5 cut(s) 174, 462, 694, 824, 1125
BsuTUI ATCGAT 1 cut(s) 651
BtgZI GCGATG 1 cut(s) 123
BtsCI GGATG 2 cut(s) 107, 576
BtsIMutI CAGTG 4 cut(s) 1262, 1292, 1317, 1324
Cac8I GCNNGC 6 cut(s) 151, 446, 555, 612, 1079, 1140
CaiI CAGNNNCTG 1 cut(s) 977
CciI TCATGA 1 cut(s) 1378
CfoI GCGC 2 cut(s) 351, 772
Cfr10I RCCGGY 3 cut(s) 365, 772, 1046
Cfr13I GGNCC 1 cut(s) 1067
ClaI ATCGAT 1 cut(s) 651
CseI GACGC 2 cut(s) 382, 1325
Csp6I GTAC 4 cut(s) 5, 688, 886, 975
CviAII CATG 8 cut(s) 187, 253, 907, 1062, 1105, 1132, 1246, 1379
CviQI GTAC 4 cut(s) 5, 688, 886, 975
DdeI CTNAG 3 cut(s) 38, 121, 936
DpnI GATC 5 cut(s) 707, 716, 749, 1112, 1117
DpnII GATC 5 cut(s) 705, 714, 747, 1110, 1115
EaeI YGGCCR 1 cut(s) 822
Eam1104I CTCTTC 2 cut(s) 509, 621
EarI CTCTTC 2 cut(s) 509, 621
Eco130I CCWWGG 1 cut(s) 457
Eco147I AGGCCT 1 cut(s) 694
Eco47I GGWCC 1 cut(s) 1067
Eco57I CTGAAG 1 cut(s) 343
EcoO109I RGGNCCY 1 cut(s) 1067
EcoT14I CCWWGG 1 cut(s) 457
ErhI CCWWGG 1 cut(s) 457
Esp3I CGTCTC 1 cut(s) 161
FaeI CATG 8 cut(s) 190, 256, 910, 1065, 1108, 1135, 1249, 1382
FaqI GGGAC 2 cut(s) 458, 1080
FatI CATG 8 cut(s) 186, 252, 906, 1061, 1104, 1131, 1245, 1378
FblI GTMKAC 2 cut(s) 866, 1357
Fnu4HI GCNGC 5 cut(s) 135, 402, 480, 822, 1044
FokI GGATG 2 cut(s) 94, 563
Fsp4HI GCNGC 5 cut(s) 135, 402, 480, 822, 1044
FspBI CTAG 5 cut(s) 278, 530, 959, 1016, 1022
GlaI GCGC 2 cut(s) 350, 771
GluI GCNGC 5 cut(s) 135, 402, 480, 822, 1044
GsaI CCCAGC 1 cut(s) 479
GsuI CTGGAG 1 cut(s) 508
HaeIII GGCC 5 cut(s) 174, 462, 694, 824, 1125
HapII CCGG 6 cut(s) 175, 366, 773, 1047, 1274, 1361
HgaI GACGC 2 cut(s) 382, 1325
HhaI GCGC 2 cut(s) 351, 772
Hin1I GRCGYC 2 cut(s) 393, 1336
Hin1II CATG 8 cut(s) 190, 256, 910, 1065, 1108, 1135, 1249, 1382
Hin6I GCGC 2 cut(s) 349, 770
HinP1I GCGC 2 cut(s) 349, 770
HinfI GANTC 5 cut(s) 387, 515, 806, 856, 1298
HpaII CCGG 6 cut(s) 175, 366, 773, 1047, 1274, 1361
Hpy166II GTNNAC 4 cut(s) 105, 500, 867, 1358
Hpy188I TCNGA 8 cut(s) 328, 581, 681, 710, 794, 836, 1115, 1350
Hpy188III TCNNGA 1 cut(s) 1379
Hpy8I GTNNAC 4 cut(s) 105, 500, 867, 1358
Hpy99I CGWCG 1 cut(s) 1341
HpyAV CCTTC 6 cut(s) 23, 37, 217, 367, 905, 1189
HpyCH4III ACNGT 5 cut(s) 74, 687, 877, 1266, 1312
HpyCH4V TGCA 6 cut(s) 137, 411, 500, 761, 1154, 1306
HpyF10VI GCNNNNNNNGC 4 cut(s) 131, 563, 767, 818
HpyF3I CTNAG 3 cut(s) 38, 121, 936
Hsp92I GRCGYC 2 cut(s) 393, 1336
Hsp92II CATG 8 cut(s) 190, 256, 910, 1065, 1108, 1135, 1249, 1382
HspAI GCGC 2 cut(s) 349, 770
KpnI GGTACC 1 cut(s) 8
Kzo9I GATC 5 cut(s) 705, 714, 747, 1110, 1115
LguI GCTCTTC 1 cut(s) 621
LmnI GCTCC 4 cut(s) 236, 353, 658, 1229
Lsp1109I GCAGC 3 cut(s) 121, 466, 1030
LweI GCATC 2 cut(s) 56, 146
MaeI CTAG 5 cut(s) 278, 530, 959, 1016, 1022
MaeIII GTNAC 1 cut(s) 739
MalI GATC 5 cut(s) 707, 716, 749, 1112, 1117
MboI GATC 5 cut(s) 705, 714, 747, 1110, 1115
MboII GAAGA 4 cut(s) 370, 496, 608, 1120
MflI RGATCY 1 cut(s) 1110
MhlI GDGCHC 1 cut(s) 502
MluCI AATT 3 cut(s) 20, 636, 963
MlyI GAGTC 2 cut(s) 509, 1292
MmeI TCCRAC 2 cut(s) 559, 772
MroXI GAANNNNTTC 1 cut(s) 805
MseI TTAA 4 cut(s) 243, 624, 843, 1387
MslI CAYNNNNRTG 2 cut(s) 343, 1163
MspA1I CMGCKG 1 cut(s) 479
MspI CCGG 6 cut(s) 175, 366, 773, 1047, 1274, 1361
MvnI CGCG 2 cut(s) 351, 770
MwoI GCNNNNNNNGC 4 cut(s) 131, 563, 767, 818
NdeII GATC 5 cut(s) 705, 714, 747, 1110, 1115
NlaIII CATG 8 cut(s) 190, 256, 910, 1065, 1108, 1135, 1249, 1382
NlaIV GGNNCC 5 cut(s) 6, 355, 660, 985, 1068
NmuCI GTSAC 1 cut(s) 739
OliI CACNNNNGTG 1 cut(s) 1163
PagI TCATGA 1 cut(s) 1378
PceI AGGCCT 1 cut(s) 694
PciSI GCTCTTC 1 cut(s) 621
PcsI WCGNNNNNNNCGW 1 cut(s) 146
PdmI GAANNNNTTC 1 cut(s) 805
PfeI GAWTC 3 cut(s) 387, 806, 856
PflMI CCANNNNNTGG 1 cut(s) 1132
PkrI GCNGC 5 cut(s) 136, 403, 481, 823, 1045
PleI GAGTC 2 cut(s) 509, 1292
PpsI GAGTC 2 cut(s) 509, 1292
PpuMI RGGWCCY 1 cut(s) 1067
Psp5II RGGWCCY 1 cut(s) 1067
PspFI CCCAGC 1 cut(s) 475
PspN4I GGNNCC 5 cut(s) 6, 355, 660, 985, 1068
PspPI GGNCC 1 cut(s) 1067
PspPPI RGGWCCY 1 cut(s) 1067
PstNI CAGNNNCTG 1 cut(s) 977
PsuI RGATCY 1 cut(s) 1110
PvuII CAGCTG 1 cut(s) 479
RsaI GTAC 4 cut(s) 6, 689, 887, 976
RsaNI GTAC 4 cut(s) 5, 688, 886, 975
RseI CAYNNNNRTG 2 cut(s) 343, 1163
SapI GCTCTTC 1 cut(s) 621
SaqAI TTAA 4 cut(s) 243, 624, 843, 1387
SatI GCNGC 5 cut(s) 135, 402, 480, 822, 1044
Sau3AI GATC 5 cut(s) 705, 714, 747, 1110, 1115
Sau96I GGNCC 1 cut(s) 1067
SchI GAGTC 2 cut(s) 509, 1292
SduI GDGCHC 1 cut(s) 502
SfaNI GCATC 2 cut(s) 56, 146
SgrAI CRCCGGYG 1 cut(s) 772
SinI GGWCC 1 cut(s) 1067
SmiMI CAYNNNNRTG 2 cut(s) 343, 1163
SpeI ACTAGT 1 cut(s) 1015
Sse9I AATT 3 cut(s) 20, 636, 963
SseBI AGGCCT 1 cut(s) 694
SsiI CCGC 4 cut(s) 351, 402, 426, 821
SspI AATATT 1 cut(s) 1385
SspMI CTAG 5 cut(s) 278, 530, 959, 1016, 1022
StuI AGGCCT 1 cut(s) 694
StyI CCWWGG 1 cut(s) 457
TaaI ACNGT 5 cut(s) 74, 687, 877, 1266, 1312
TaqI TCGA 4 cut(s) 549, 600, 651, 854
TasI AATT 3 cut(s) 20, 636, 963
TatI WGTACW 1 cut(s) 687
TauI GCSGC 2 cut(s) 404, 824
TfiI GAWTC 3 cut(s) 387, 806, 856
Tru1I TTAA 4 cut(s) 243, 624, 843, 1387
Tru9I TTAA 4 cut(s) 243, 624, 843, 1387
TscAI CASTG 4 cut(s) 1269, 1299, 1317, 1331
TseFI GTSAC 1 cut(s) 739
TseI GCWGC 3 cut(s) 134, 479, 1043
Tsp45I GTSAC 1 cut(s) 739
TspDTI ATGAA 6 cut(s) 370, 496, 895, 919, 1121, 1160
TspGWI ACGGA 3 cut(s) 18, 22, 714
TspRI CASTG 4 cut(s) 1269, 1299, 1317, 1331
Van91I CCANNNNNTGG 1 cut(s) 1132
VneI GTGCAC 1 cut(s) 498
VpaK11BI GGWCC 1 cut(s) 1067
XapI RAATTY 1 cut(s) 20
XcmI CCANNNNNNNNNTGG 3 cut(s) 259, 380, 740
XmiI GTMKAC 2 cut(s) 866, 1357
XmnI GAANNNNTTC 1 cut(s) 805
XspI CTAG 5 cut(s) 278, 530, 959, 1016, 1022
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.