Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0004330

Physical Location & Seq

Genomic Coordinates Forward (+)

44736134 .. 44746364

Gene Structure 10231 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1368000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1533 bp

ATGGCCGTGGGTGGTTTCGCCGTTGACGGACCTCTGGCCGTCGCTGGCATCGACGGCAAGATAACGGTTTCGGTGGTGATAACGTGCATCGTCGCGGCTTCTTGCGGTCTTATATTTGGTTATGACATCGGAATTTCAGGAGGAGTAACTACAATGGCACCATTTCTGAACAAGTTTTTCCCAGAAGTACTGAGAAAGGGAGGGCCCGCGAAAAACATATATTGTGTTTATGATAGCCAGGTTTTGACAGCATTCACGTCCTCCCTATACATAGCCGGATTGGCTGCATCGCTCGTGGCCAGCCGTCTGGCCAAGACTATCGGCCGCCGCAATGTTATGCTTCTGGGTGGCTGCACCTTCTTTGCTGGGTCTGCCATCAATGGGGGCGCTGTCAATGTTGCCATGCTTATTTTGGGCCGTATCTTGCTCGGATTTGGGGTTGGTTTCACTAACCAATCTGCTCCAATCTACCTCTCAGAAATTGCACCACCCAAGTGGCGAGGTGCATTTAGCACCGGCTTTCAGTTCTTCATAGGAATTGGGGTGGTGGCATCCAACTGCATAAACTATGCCACGGCCAAGCACAGCTGGGGCTGGCGCCTCTCTCTCGGTCTCGCAATAGTCCCGGCCACCATCATGACCATTGGCACCCTCTTCATCTCGGACTCACCCACAAGCTTAGTAGGACGCAATAGGGTCGACCAAGCCAGAAAATCCCTAGTTAAAATCCGAGGCAAGGATGACATTGAGGCCGAGCTCGCTCTTCTTATCAAGGCCACTGAAGTTGCCAGAGCTCTTAATGAGGAACCTTTTGTGACCATATTTCAGAGGCAGTATAGGCCTCAGCTTTTGATAGGTGCACTTGCTGTGCCGTTTTTTCAGCAGCTCACTGGGATTAATATCATTGCTTTCTATGCGCCTGTGTTGTTTCAATCTGTTGGCTTCGGCAATGATTCTGCTCTCATTGCTGCGATAATACTTGGGTTGGTGAATCTTGGTTCCATCCTTGTGTCTACATATATGGTTGATCGGCATGGTCGGAGGTTTTTGTTCATGCAGGGTGGCATCCAGATGGTCATCTGTCAGGTTGGTGTAGCTATAGTTCTGGGAGTTACAACAGGTACGGATGGCAATGGCCATATCTCAAAAAGCTATGCCATACTAGTTCTAGTACTGATGTGTTTATATGCTGCTGGTTTTGGTTGGTCATGGGGACCTTTGAGTTGGCTTATCCCCAGTGAGATATTCCCCATGAAAATTCGACCCACTGGCCAAAGCATGGGGCTAGCAGTCAACTTTGCCACCACATTTGTACTCTCCCAAACCTTCTTGACCATGCTGTGCCATTTCAAATTCGCCACATTCTTGTTCTACGGCAGTTGGATTCTGGTGATGACCATTTTCGTCACGCTCTTCCTGCCAGAGACTAAAGGAATCCCGTTGGATCAAGTTTACACCGTGTGGGCAAAGCATTGGTATTGGCGCAGGTTCGTTGAAGGTAGCCCTAAGGTTGATGCCGATGAAAATGAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005351 GO:0005355 GO:0005402 GO:0005575 GO:0006810 GO:0006811 GO:0006812 GO:0008150 GO:0008324 GO:0008643 GO:0008645 GO:0015075 GO:0015077 GO:0015078 GO:0015144 GO:0015145 GO:0015149 GO:0015291 GO:0015293 GO:0015294 GO:0015295 GO:0015318 GO:0015672 GO:0015749 GO:0016020 GO:0022804 GO:0022857 GO:0022890 GO:0034219 GO:0034220 GO:0046323 GO:0051119 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0098655 GO:0098660 GO:0098662 GO:1902600 GO:1904659

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sugar_tr

Protein Analysis

511

Amino Acids

55.03

Weight (kDa)

9.26

Isoelectric Point (pI)

36.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sugar_tr	PF00083	29 - 488	4.5e-109	Sugar (and other) transporter
MFS_1	PF07690	82 - 429	1.2e-26	Major Facilitator Superfamily

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004330)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G34580 AT1G34580
fragaria_vesca	FvH4_5g37380 FvH4_5g37380 FvH4_5g37390
malus_domestica	MD08G1182300.v1.1 MD15G1368000.v1.1
prunus_persica	Prupe.1G516200_v2.0.a1
pyrus_communis	pycom08g15610 pycom15g32990
rosa_chinensis	RchiOBHm_Chr7g0239051 RchiOBHm_Chr7g0239061
rosa_laevigata	RLG00000000785 RLG00000000787
rosa_multiflora	Rmu_sc0004605.1_g000001 Rmu_ssc0000306.1_g000001
rosa_roxburghii	Rroxscaffold_3G00221330
rosa_rugosa	Rorug07G0325000 Rorug07G0325100 Rorug07G0325200 Rorug07G0325300 Rorug07G0325400.1
rosa_samantha	Rh7AG479800 Rh7AG479900 Rh7BG452600 Rh7BG452800 Rh7CG497300 Rh7CG497400 Rh7DG464800 Rh7DG465000
rosa_wichuraiana	Rw7G040120 Rw7G040130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1476
AccB1I	GGYRCC	3 cut(s)	157, 597, 647
AccB7I	CCANNNNNTGG	1 cut(s)	1279
AccI	GTMKAC	2 cut(s)	699, 1013
AccII	CGCG	2 cut(s)	95, 209
AciI	CCGC	5 cut(s)	95, 105, 207, 325, 328
AclWI	GGATC	1 cut(s)	1452
AcoI	YGGCCR	9 cut(s)	3, 36, 297, 309, 322, 576, 627, 1135, 1270
AcsI	RAATTY	3 cut(s)	132, 1257, 1352
AcuI	CTGAAG	1 cut(s)	801
AcyI	GRCGYC	1 cut(s)	598
AdeI	CACNNNGTG	1 cut(s)	1461
AfaI	GTAC	4 cut(s)	189, 1123, 1173, 1314
AfiI	CCNNNNNNNGG	3 cut(s)	381, 736, 1279
AgsI	TTSAA	3 cut(s)	932, 1351, 1496
AhlI	ACTAGT	1 cut(s)	1162
AjiI	CACGTC	1 cut(s)	258
AjnI	CCWGG	1 cut(s)	237
AleI	CACNNNNGTG	1 cut(s)	493
AluBI	AGCT	8 cut(s)	588, 678, 757, 794, 847, 886, 1097, 1152
AluI	AGCT	8 cut(s)	588, 678, 757, 794, 847, 886, 1097, 1152
Alw21I	GWGCWC	3 cut(s)	759, 796, 862
Alw26I	GTCTC	2 cut(s)	617, 1418
Alw44I	GTGCAC	1 cut(s)	858
AlwI	GGATC	1 cut(s)	1452
ApaI	GGGCCC	1 cut(s)	207
ApaLI	GTGCAC	1 cut(s)	858
ApeKI	GCWGC	5 cut(s)	284, 351, 883, 968, 1190
ApoI	RAATTY	3 cut(s)	132, 1257, 1352
AseI	ATTAAT	1 cut(s)	897
AspLEI	GCGC	4 cut(s)	389, 600, 919, 1485
AspS9I	GGNCC	5 cut(s)	29, 203, 204, 415, 1214
AsuC2I	CCSGG	1 cut(s)	626
AsuHPI	GGTGA	4 cut(s)	88, 660, 1000, 1402
AsuNHI	GCTAGC	1 cut(s)	1285
AvaII	GGWCC	2 cut(s)	29, 1214
AxyI	CCTNAGG	1 cut(s)	1506
BaeGI	GKGCMC	2 cut(s)	207, 862
BalI	TGGCCA	4 cut(s)	299, 311, 1137, 1272
BanI	GGYRCC	3 cut(s)	157, 597, 647
BanII	GRGCYC	3 cut(s)	207, 759, 796
BauI	CACGAG	1 cut(s)	293
Bbv12I	GWGCWC	3 cut(s)	759, 796, 862
BbvCI	CCTCAGC	1 cut(s)	843
BbvI	GCAGC	5 cut(s)	271, 338, 895, 955, 1177
BccI	CCATC	5 cut(s)	383, 641, 1010, 1066, 1121
BceAI	ACGGC	8 cut(s)	5, 23, 70, 288, 402, 591, 856, 1390
BcgI	CGANNNNNNTGC	2 cut(s)	679, 713
BciT130I	CCWGG	1 cut(s)	239
BcnI	CCSGG	1 cut(s)	626
BcoDI	GTCTC	2 cut(s)	617, 1418
BcuI	ACTAGT	1 cut(s)	1162
BfaI	CTAG	4 cut(s)	719, 1163, 1169, 1286
BfmI	CTRYAG	1 cut(s)	1098
BfoI	RGCGCY	2 cut(s)	390, 601
BfuAI	ACCTGC	1 cut(s)	1476
BglI	GCCNNNNNGGC	1 cut(s)	281
BisI	GCNGC	8 cut(s)	96, 285, 325, 328, 352, 884, 969, 1191
BlsI	GCNGC	8 cut(s)	97, 286, 326, 329, 353, 885, 970, 1192
BmcAI	AGTACT	2 cut(s)	189, 1173
Bme1390I	CCNGG	2 cut(s)	239, 626
Bme18I	GGWCC	2 cut(s)	29, 1214
BmgBI	CACGTC	1 cut(s)	258
BmgT120I	GGNCC	5 cut(s)	29, 203, 204, 415, 1214
BmiI	GGNNCC	7 cut(s)	159, 205, 599, 649, 807, 1000, 1215
BmrFI	CCNGG	2 cut(s)	239, 626
BmrI	ACTGGG	2 cut(s)	900, 1230
BmsI	GCATC	6 cut(s)	57, 96, 296, 560, 1074, 1504
BmtI	GCTAGC	1 cut(s)	1289
BmuI	ACTGGG	2 cut(s)	900, 1230
Bpu10I	CCTNAGC	1 cut(s)	843
BpuMI	CCSGG	1 cut(s)	626
BsaBI	GATNNNNATC	2 cut(s)	899, 1076
BsaHI	GRCGYC	1 cut(s)	598
BsaI	GGTCTC	1 cut(s)	617
BsaJI	CCNNGG	3 cut(s)	6, 573, 730
Bsc4I	CCNNNNNNNGG	3 cut(s)	381, 736, 1279
Bse118I	RCCGGY	1 cut(s)	515
Bse1I	ACTGG	3 cut(s)	895, 1236, 1273
Bse21I	CCTNAGG	1 cut(s)	1506
Bse3DI	GCAATG	5 cut(s)	337, 903, 955, 963, 1138
Bse8I	GATNNNNATC	2 cut(s)	899, 1076
BseBI	CCWGG	1 cut(s)	239
BseDI	CCNNGG	3 cut(s)	6, 573, 730
BseGI	GGATG	5 cut(s)	551, 745, 1002, 1065, 1132
BseJI	GATNNNNATC	2 cut(s)	899, 1076
BseLI	CCNNNNNNNGG	3 cut(s)	381, 736, 1279
BseMI	GCAATG	5 cut(s)	337, 903, 955, 963, 1138
BseMII	CTCAG	3 cut(s)	182, 489, 857
BseNI	ACTGG	3 cut(s)	895, 1236, 1273
BseRI	GAGGAG	1 cut(s)	156
BseSI	GKGCMC	2 cut(s)	207, 862
BseX3I	CGGCCG	1 cut(s)	322
BseXI	GCAGC	5 cut(s)	271, 338, 895, 955, 1177
BseYI	CCCAGC	2 cut(s)	365, 588
BsgI	GTGCAG	1 cut(s)	337
Bsh1236I	CGCG	2 cut(s)	95, 209
Bsh1285I	CGRYCG	1 cut(s)	325
BshNI	GGYRCC	3 cut(s)	157, 597, 647
BsiEI	CGRYCG	1 cut(s)	325
BsiHKAI	GWGCWC	3 cut(s)	759, 796, 862
BsiSI	CCGG	3 cut(s)	276, 516, 626
BslFI	GGGAC	2 cut(s)	608, 1227
BslI	CCNNNNNNNGG	3 cut(s)	381, 736, 1279
BsmAI	GTCTC	2 cut(s)	617, 1418
BsmFI	GGGAC	2 cut(s)	608, 1227
BsmI	GAATGC	1 cut(s)	251
Bso31I	GGTCTC	1 cut(s)	617
Bsp120I	GGGCCC	1 cut(s)	203
Bsp1286I	GDGCHC	4 cut(s)	207, 759, 796, 862
Bsp143I	GATC	2 cut(s)	1027, 1444
BspACI	CCGC	5 cut(s)	95, 105, 207, 325, 328
BspCNI	CTCAG	3 cut(s)	183, 488, 856
BspFNI	CGCG	2 cut(s)	95, 209
BspHI	TCATGA	1 cut(s)	636
BspLI	GGNNCC	7 cut(s)	159, 205, 599, 649, 807, 1000, 1215
BspMI	ACCTGC	1 cut(s)	1476
BspOI	GCTAGC	1 cut(s)	1289
BspPI	GGATC	1 cut(s)	1452
BspQI	GCTCTTC	2 cut(s)	768, 1418
BspT107I	GGYRCC	3 cut(s)	157, 597, 647
BspTNI	GGTCTC	1 cut(s)	617
BsrDI	GCAATG	5 cut(s)	337, 903, 955, 963, 1138
BsrFI	RCCGGY	1 cut(s)	515
BsrI	ACTGG	3 cut(s)	895, 1236, 1273
BssAI	RCCGGY	1 cut(s)	515
BssECI	CCNNGG	3 cut(s)	6, 573, 730
BssMI	GATC	2 cut(s)	1027, 1444
BssNI	GRCGYC	1 cut(s)	598
BssSI	CACGAG	1 cut(s)	293
Bst2BI	CACGAG	1 cut(s)	293
Bst2UI	CCWGG	1 cut(s)	239
Bst4CI	ACNGT	2 cut(s)	67, 1459
Bst6I	CTCTTC	3 cut(s)	659, 768, 1418
BstACI	GRCGYC	1 cut(s)	598
BstC8I	GCNNGC	6 cut(s)	46, 207, 301, 596, 759, 1287
BstDEI	CTNAG	5 cut(s)	191, 475, 679, 843, 1506
BstDSI	CCRYGG	2 cut(s)	6, 573
BstF5I	GGATG	5 cut(s)	551, 745, 1002, 1065, 1132
BstFNI	CGCG	2 cut(s)	95, 209
BstH2I	RGCGCY	2 cut(s)	390, 601
BstHHI	GCGC	4 cut(s)	389, 600, 919, 1485
BstKTI	GATC	2 cut(s)	1030, 1447
BstMAI	GTCTC	2 cut(s)	617, 1418
BstMBI	GATC	2 cut(s)	1027, 1444
BstMCI	CGRYCG	1 cut(s)	325
BstMWI	GCNNNNNNNGC	8 cut(s)	54, 281, 371, 758, 838, 914, 965, 1417
BstNI	CCWGG	1 cut(s)	239
BstSCI	CCNGG	2 cut(s)	237, 624
BstSFI	CTRYAG	1 cut(s)	1098
BstSLI	GKGCMC	2 cut(s)	207, 862
BstUI	CGCG	2 cut(s)	95, 209
BstV1I	GCAGC	5 cut(s)	271, 338, 895, 955, 1177
BstXI	CCANNNNNNTGG	2 cut(s)	307, 495
BstZI	CGGCCG	1 cut(s)	322
Bsu36I	CCTNAGG	1 cut(s)	1506
BtgI	CCRYGG	2 cut(s)	6, 573
BtgZI	GCGATG	1 cut(s)	273
BtrI	CACGTC	1 cut(s)	258
BtsCI	GGATG	5 cut(s)	551, 745, 1002, 1065, 1132
BtsIMutI	CAGTG	4 cut(s)	777, 888, 1243, 1266
BveI	ACCTGC	1 cut(s)	1476
Cac8I	GCNNGC	6 cut(s)	46, 207, 301, 596, 759, 1287
CciI	TCATGA	1 cut(s)	636
CfoI	GCGC	4 cut(s)	389, 600, 919, 1485
Cfr10I	RCCGGY	1 cut(s)	515
Cfr13I	GGNCC	5 cut(s)	29, 203, 204, 415, 1214
CseI	GACGC	1 cut(s)	696
Csp6I	GTAC	4 cut(s)	188, 1122, 1172, 1313
CspCI	CAANNNNNGTGG	4 cut(s)	766, 801, 1291, 1326
CviAII	CATG	8 cut(s)	403, 637, 1034, 1054, 1209, 1252, 1279, 1336
CviQI	GTAC	4 cut(s)	188, 1122, 1172, 1313
DdeI	CTNAG	5 cut(s)	191, 475, 679, 843, 1506
DinI	GGCGCC	1 cut(s)	599
DpnI	GATC	2 cut(s)	1029, 1446
DpnII	GATC	2 cut(s)	1027, 1444
DraIII	CACNNNGTG	1 cut(s)	1461
EaeI	YGGCCR	9 cut(s)	3, 36, 297, 309, 322, 576, 627, 1135, 1270
EagI	CGGCCG	1 cut(s)	322
Eam1104I	CTCTTC	3 cut(s)	659, 768, 1418
EarI	CTCTTC	3 cut(s)	659, 768, 1418
Ecl136II	GAGCTC	2 cut(s)	757, 794
EclXI	CGGCCG	1 cut(s)	322
Eco147I	AGGCCT	1 cut(s)	841
Eco24I	GRGCYC	3 cut(s)	207, 759, 796
Eco31I	GGTCTC	1 cut(s)	617
Eco47I	GGWCC	2 cut(s)	29, 1214
Eco52I	CGGCCG	1 cut(s)	322
Eco53kI	GAGCTC	2 cut(s)	757, 794
Eco57I	CTGAAG	1 cut(s)	801
Eco81I	CCTNAGG	1 cut(s)	1506
EcoICRI	GAGCTC	2 cut(s)	757, 794
EcoO109I	RGGNCCY	2 cut(s)	203, 1214
EcoRII	CCWGG	1 cut(s)	237
EcoT38I	GRGCYC	3 cut(s)	207, 759, 796
EgeI	GGCGCC	1 cut(s)	599
EheI	GGCGCC	1 cut(s)	599
FaeI	CATG	8 cut(s)	406, 640, 1037, 1057, 1212, 1255, 1282, 1339
FaqI	GGGAC	2 cut(s)	608, 1227
FatI	CATG	8 cut(s)	402, 636, 1033, 1053, 1208, 1251, 1278, 1335
FauI	CCCGC	1 cut(s)	214
FblI	GTMKAC	2 cut(s)	699, 1013
Fnu4HI	GCNGC	8 cut(s)	96, 285, 325, 328, 352, 884, 969, 1191
FokI	GGATG	5 cut(s)	538, 752, 989, 1052, 1139
FriOI	GRGCYC	3 cut(s)	207, 759, 796
Fsp4HI	GCNGC	8 cut(s)	96, 285, 325, 328, 352, 884, 969, 1191
FspBI	CTAG	4 cut(s)	719, 1163, 1169, 1286
GlaI	GCGC	4 cut(s)	388, 599, 918, 1484
GluI	GCNGC	8 cut(s)	96, 285, 325, 328, 352, 884, 969, 1191
GsaI	CCCAGC	2 cut(s)	369, 592
HaeII	RGCGCY	2 cut(s)	390, 601
HapII	CCGG	3 cut(s)	276, 516, 626
HgaI	GACGC	1 cut(s)	696
HhaI	GCGC	4 cut(s)	389, 600, 919, 1485
Hin1I	GRCGYC	1 cut(s)	598
Hin1II	CATG	8 cut(s)	406, 640, 1037, 1057, 1212, 1255, 1282, 1339
Hin6I	GCGC	4 cut(s)	387, 598, 917, 1483
HinP1I	GCGC	4 cut(s)	387, 598, 917, 1483
HincII	GTYRAC	3 cut(s)	25, 700, 1294
HindII	GTYRAC	3 cut(s)	25, 700, 1294
HindIII	AAGCTT	1 cut(s)	676
HinfI	GANTC	5 cut(s)	665, 953, 991, 1384, 1434
HpaII	CCGG	3 cut(s)	276, 516, 626
HphI	GGTGA	4 cut(s)	88, 660, 1000, 1402
Hpy166II	GTNNAC	6 cut(s)	25, 700, 860, 1014, 1294, 1453
Hpy188I	TCNGA	8 cut(s)	131, 168, 431, 478, 664, 731, 828, 1041
Hpy188III	TCNNGA	4 cut(s)	138, 637, 1069, 1330
Hpy8I	GTNNAC	6 cut(s)	25, 700, 860, 1014, 1294, 1453
Hpy99I	CGWCG	3 cut(s)	44, 56, 95
HpyAV	CCTTC	3 cut(s)	367, 1336, 1490
HpyCH4III	ACNGT	2 cut(s)	67, 1459
HpyCH4IV	ACGT	2 cut(s)	83, 257
HpyCH4V	TGCA	8 cut(s)	87, 287, 354, 485, 506, 561, 860, 1057
HpyF10VI	GCNNNNNNNGC	8 cut(s)	54, 281, 371, 758, 838, 914, 965, 1417
HpyF3I	CTNAG	5 cut(s)	191, 475, 679, 843, 1506
HpySE526I	ACGT	2 cut(s)	83, 257
Hsp92I	GRCGYC	1 cut(s)	598
Hsp92II	CATG	8 cut(s)	406, 640, 1037, 1057, 1212, 1255, 1282, 1339
HspAI	GCGC	4 cut(s)	387, 598, 917, 1483
KasI	GGCGCC	1 cut(s)	597
Kzo9I	GATC	2 cut(s)	1027, 1444
LguI	GCTCTTC	2 cut(s)	768, 1418
LmnI	GCTCC	1 cut(s)	466
Lsp1109I	GCAGC	5 cut(s)	271, 338, 895, 955, 1177
LweI	GCATC	6 cut(s)	57, 96, 296, 560, 1074, 1504
MaeI	CTAG	4 cut(s)	719, 1163, 1169, 1286
MaeII	ACGT	2 cut(s)	83, 257
MaeIII	GTNAC	4 cut(s)	145, 814, 1111, 1405
MalI	GATC	2 cut(s)	1029, 1446
MboI	GATC	2 cut(s)	1027, 1444
MboII	GAAGA	4 cut(s)	520, 646, 755, 1405
MhlI	GDGCHC	4 cut(s)	207, 759, 796, 862
MlsI	TGGCCA	4 cut(s)	299, 311, 1137, 1272
MluCI	AATT	5 cut(s)	132, 480, 537, 1257, 1352
MluNI	TGGCCA	4 cut(s)	299, 311, 1137, 1272
Mly113I	GGCGCC	1 cut(s)	598
MlyI	GAGTC	1 cut(s)	659
MmeI	TCCRAC	4 cut(s)	579, 1019, 1361, 1422
Mox20I	TGGCCA	4 cut(s)	299, 311, 1137, 1272
MscI	TGGCCA	4 cut(s)	299, 311, 1137, 1272
MseI	TTAA	3 cut(s)	723, 798, 897
MslI	CAYNNNNRTG	4 cut(s)	493, 635, 1007, 1070
Msp20I	TGGCCA	4 cut(s)	299, 311, 1137, 1272
MspA1I	CMGCKG	1 cut(s)	588
MspI	CCGG	3 cut(s)	276, 516, 626
MspR9I	CCNGG	2 cut(s)	239, 626
Mva1269I	GAATGC	1 cut(s)	251
MvaI	CCWGG	1 cut(s)	239
MvnI	CGCG	2 cut(s)	95, 209
MwoI	GCNNNNNNNGC	8 cut(s)	54, 281, 371, 758, 838, 914, 965, 1417
NarI	GGCGCC	1 cut(s)	598
NciI	CCSGG	1 cut(s)	626
NdeII	GATC	2 cut(s)	1027, 1444
NheI	GCTAGC	1 cut(s)	1285
NlaIII	CATG	8 cut(s)	406, 640, 1037, 1057, 1212, 1255, 1282, 1339
NlaIV	GGNNCC	7 cut(s)	159, 205, 599, 649, 807, 1000, 1215
NmeAIII	GCCGAG	1 cut(s)	778
NmuCI	GTSAC	2 cut(s)	814, 1405
OliI	CACNNNNGTG	1 cut(s)	493
PagI	TCATGA	1 cut(s)	636
PceI	AGGCCT	1 cut(s)	841
PciSI	GCTCTTC	2 cut(s)	768, 1418
PcsI	WCGNNNNNNNCGW	1 cut(s)	48
PctI	GAATGC	1 cut(s)	251
PfeI	GAWTC	4 cut(s)	953, 991, 1384, 1434
PflMI	CCANNNNNTGG	1 cut(s)	1279
PkrI	GCNGC	8 cut(s)	97, 286, 326, 329, 353, 885, 970, 1192
PleI	GAGTC	1 cut(s)	659
PluTI	GGCGCC	1 cut(s)	601
PpsI	GAGTC	1 cut(s)	659
PpuMI	RGGWCCY	1 cut(s)	1214
PshBI	ATTAAT	1 cut(s)	897
Psp124BI	GAGCTC	2 cut(s)	759, 796
Psp5II	RGGWCCY	1 cut(s)	1214
Psp6I	CCWGG	1 cut(s)	237
PspFI	CCCAGC	2 cut(s)	365, 588
PspGI	CCWGG	1 cut(s)	237
PspN4I	GGNNCC	7 cut(s)	159, 205, 599, 649, 807, 1000, 1215
PspOMI	GGGCCC	1 cut(s)	203
PspPI	GGNCC	5 cut(s)	29, 203, 204, 415, 1214
PspPPI	RGGWCCY	1 cut(s)	1214
PsrI	GAACNNNNNNTAC	2 cut(s)	1086, 1118
PvuII	CAGCTG	1 cut(s)	588
RsaI	GTAC	4 cut(s)	189, 1123, 1173, 1314
RsaNI	GTAC	4 cut(s)	188, 1122, 1172, 1313
RseI	CAYNNNNRTG	4 cut(s)	493, 635, 1007, 1070
SacI	GAGCTC	2 cut(s)	759, 796
SalI	GTCGAC	1 cut(s)	698
SapI	GCTCTTC	2 cut(s)	768, 1418
SaqAI	TTAA	3 cut(s)	723, 798, 897
SatI	GCNGC	8 cut(s)	96, 285, 325, 328, 352, 884, 969, 1191
Sau3AI	GATC	2 cut(s)	1027, 1444
Sau96I	GGNCC	5 cut(s)	29, 203, 204, 415, 1214
ScaI	AGTACT	2 cut(s)	189, 1173
SchI	GAGTC	1 cut(s)	659
ScrFI	CCNGG	2 cut(s)	239, 626
SduI	GDGCHC	4 cut(s)	207, 759, 796, 862
SfaNI	GCATC	6 cut(s)	57, 96, 296, 560, 1074, 1504
SfcI	CTRYAG	1 cut(s)	1098
SfoI	GGCGCC	1 cut(s)	599
SinI	GGWCC	2 cut(s)	29, 1214
SmiMI	CAYNNNNRTG	4 cut(s)	493, 635, 1007, 1070
SpeI	ACTAGT	1 cut(s)	1162
Sse9I	AATT	5 cut(s)	132, 480, 537, 1257, 1352
SseBI	AGGCCT	1 cut(s)	841
SsiI	CCGC	5 cut(s)	95, 105, 207, 325, 328
SspDI	GGCGCC	1 cut(s)	597
SspMI	CTAG	4 cut(s)	719, 1163, 1169, 1286
SstI	GAGCTC	2 cut(s)	759, 796
StuI	AGGCCT	1 cut(s)	841
StyD4I	CCNGG	2 cut(s)	237, 624
TaaI	ACNGT	2 cut(s)	67, 1459
TaiI	ACGT	2 cut(s)	86, 260
TaqI	TCGA	3 cut(s)	51, 699, 1261
TaqII	GACCGA	1 cut(s)	599
TasI	AATT	5 cut(s)	132, 480, 537, 1257, 1352
TatI	WGTACW	3 cut(s)	187, 1171, 1312
TauI	GCSGC	3 cut(s)	98, 327, 330
TfiI	GAWTC	4 cut(s)	953, 991, 1384, 1434
Tru1I	TTAA	3 cut(s)	723, 798, 897
Tru9I	TTAA	3 cut(s)	723, 798, 897
TscAI	CASTG	4 cut(s)	784, 895, 1243, 1273
TseFI	GTSAC	2 cut(s)	814, 1405
TseI	GCWGC	5 cut(s)	284, 351, 883, 968, 1190
Tsp45I	GTSAC	2 cut(s)	814, 1405
TspDTI	ATGAA	4 cut(s)	520, 646, 1042, 1268
TspGWI	ACGGA	2 cut(s)	42, 1139
TspRI	CASTG	4 cut(s)	784, 895, 1243, 1273
Van91I	CCANNNNNTGG	1 cut(s)	1279
VneI	GTGCAC	1 cut(s)	858
VpaK11BI	GGWCC	2 cut(s)	29, 1214
VspI	ATTAAT	1 cut(s)	897
XapI	RAATTY	3 cut(s)	132, 1257, 1352
XcmI	CCANNNNNNNNNTGG	1 cut(s)	409
XmiI	GTMKAC	2 cut(s)	699, 1013
XspI	CTAG	4 cut(s)	719, 1163, 1169, 1286
ZrmI	AGTACT	2 cut(s)	189, 1173

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.