Rmu_sc0004605.1_g000001
ERF Family

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004605.1
Physical Location & Seq
Reverse (-)
9183 .. 11612
2430 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004605.1_g000001.1.cds

Sequence Viewer

Length: 1371 bp
atgccggtggaaggcattgccgttgacatcaagccagtcaccggcatcaacaatggaaagataacgttgtcagtggtgattacctgcattgtggctgcgtcttgcggcctcatatatggctacgacatcggaatttcagccggtttggccacatcgcttgtggcaagccgtctcaccaagattctaggccgaaggaacatcatgctcttaggtggttctaccttccttgttgggtctgctttaaatggtggagctgttaatgttgaaatgctcatcttgggtcgtatcatgctagggtttggagttggtttcacgaaccaatctgctcccatctacctctccgaagtcgcaccaccaaaatggcgcggagcctttagcaccggcttccagttcttcatcggaatcggcgtcctggccgccagctgcataaacttcgccgccgccaagcacgaacacggctggcgtttctccctcggcctcgccgtagtccccgctgccataatgacccttggcgccatcttcatttcggattccccctcgagcctagtcgaacgcaacaagctcgagcaagcgaagaaagccttaataaacatccgaggcaaagacacaaacatcgaaccagagctggcgcttctcattaaaaatagtgaaatttccaaagctatcaatgaagagccttttgtgactatatttcagaggcagtacaggcctcaacttgtgatcggaatgattgccattccgttttttcatcagatgtctgggatcaacgccgttgcgttttacacgccggtgctgtttcagtctgtagggttgggaaacgattctgctctgattgcggcgatcatactcggaatggtgaatatcctatcaattcttgtgtctacttatgcggttgatcggtgtgggagaaggtttttgttgatggaagctggtatccaaatgatcattactgaggttgcggtggctattgttctagcactaacaacaggtactgacggcaccaagcgtatctcaaagggctatgccatactagtcctggtgttgatgtgtttctatgctgctgcttttgcttggtcatggggtcctttgaactggctcataccaattgagatattccccatgaagattcgacccacaggccagagcatcgggattgctgtgaactttgcagctacatttttggtgtcccaaaccttcttgtcaatgttgtgccatttcaaatatggcacattcctgttctatggaggttggatattcatcatgaccatttttgttgtactattcttgccggagactaaagggatatcactggagtcgatgcatacggtgtgggagaagcactggtattggcgtcggtttgttctgggttaa

Protein Analysis

456

Amino Acids

49.58

Weight (kDa)

9.33

Isoelectric Point (pI)

39.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 92
AccB1I GGYRCC 2 cut(s) 512, 998
AccI GTMKAC 1 cut(s) 881
AccII CGCG 1 cut(s) 366
AciI CCGC 9 cut(s) 105, 366, 417, 438, 441, 492, 836, 890, 959
AclI AACGTT 1 cut(s) 65
AclWI GGATC 1 cut(s) 770
AcoI YGGCCR 2 cut(s) 147, 414
AcsI RAATTY 2 cut(s) 132, 651
AcyI GRCGYC 3 cut(s) 408, 513, 1351
AfaI GTAC 3 cut(s) 704, 991, 1278
AfiI CCNNNNNNNGG 2 cut(s) 11, 41
AgsI TTSAA 3 cut(s) 266, 1090, 1219
AhlI ACTAGT 1 cut(s) 1030
AjnI CCWGG 2 cut(s) 411, 1035
AleI CACNNNNGTG 1 cut(s) 788
AluBI AGCT 7 cut(s) 254, 423, 562, 625, 662, 929, 1172
AluI AGCT 7 cut(s) 254, 423, 562, 625, 662, 929, 1172
Alw26I GTCTC 2 cut(s) 176, 1286
AlwI GGATC 1 cut(s) 770
AlwNI CAGNNNCTG 1 cut(s) 992
Ama87I CYCGRG 2 cut(s) 538, 563
AoxI GGCC 7 cut(s) 106, 147, 187, 414, 475, 707, 1138
ApeKI GCWGC 6 cut(s) 95, 423, 494, 1058, 1061, 1169
ApoI RAATTY 2 cut(s) 132, 651
Asp700I GAANNNNTTC 1 cut(s) 820
AspLEI GCGC 3 cut(s) 366, 515, 631
AspS9I GGNCC 1 cut(s) 1082
AsuHPI GGTGA 4 cut(s) 31, 88, 166, 868
AvaI CYCGRG 2 cut(s) 538, 563
AvaII GGWCC 1 cut(s) 1082
BalI TGGCCA 1 cut(s) 149
BanI GGYRCC 2 cut(s) 512, 998
BbvI GCAGC 6 cut(s) 82, 410, 481, 1045, 1048, 1181
BccI CCATC 3 cut(s) 338, 524, 916
BceAI ACGGC 6 cut(s) 5, 153, 467, 472, 755, 1012
BcgI CGANNNNNNTGC 4 cut(s) 415, 449, 544, 578
BciT130I CCWGG 2 cut(s) 413, 1037
BciVI GTATCC 1 cut(s) 944
BclI TGATCA 1 cut(s) 942
BcoDI GTCTC 2 cut(s) 176, 1286
BcuI ACTAGT 1 cut(s) 1030
BfaI CTAG 5 cut(s) 185, 293, 545, 974, 1031
BfmI CTRYAG 1 cut(s) 804
BfoI RGCGCY 2 cut(s) 516, 632
BfuAI ACCTGC 1 cut(s) 92
BfuI GTATCC 1 cut(s) 944
BglI GCCNNNNNGGC 1 cut(s) 146
Bme1390I CCNGG 2 cut(s) 413, 1037
Bme18I GGWCC 1 cut(s) 1082
BmeT110I CYCGRG 2 cut(s) 538, 563
BmgT120I GGNCC 1 cut(s) 1082
BmiI GGNNCC 4 cut(s) 370, 514, 1000, 1083
BmrFI CCNGG 2 cut(s) 413, 1037
BmsI GCATC 3 cut(s) 54, 1155, 1308
BpmI CTGGAG 1 cut(s) 1331
BsaBI GATNNNNATC 1 cut(s) 1256
BsaHI GRCGYC 3 cut(s) 408, 513, 1351
BsaJI CCNNGG 3 cut(s) 472, 508, 595
Bsc4I CCNNNNNNNGG 2 cut(s) 11, 41
Bse118I RCCGGY 5 cut(s) 4, 41, 140, 380, 787
Bse1I ACTGG 5 cut(s) 35, 388, 1097, 1314, 1346
Bse3DI GCAATG 1 cut(s) 15
Bse8I GATNNNNATC 1 cut(s) 1256
BseBI CCWGG 2 cut(s) 413, 1037
BseDI CCNNGG 3 cut(s) 472, 508, 595
BseGI GGATG 1 cut(s) 591
BseJI GATNNNNATC 1 cut(s) 1256
BseLI CCNNNNNNNGG 2 cut(s) 11, 41
BseMI GCAATG 1 cut(s) 15
BseMII CTCAG 1 cut(s) 942
BseNI ACTGG 5 cut(s) 35, 388, 1097, 1314, 1346
BseXI GCAGC 6 cut(s) 82, 410, 481, 1045, 1048, 1181
Bsh1236I CGCG 1 cut(s) 366
BshFI GGCC 7 cut(s) 108, 149, 189, 416, 477, 709, 1140
BshNI GGYRCC 2 cut(s) 512, 998
BsiHKCI CYCGRG 2 cut(s) 538, 563
BsiSI CCGG 6 cut(s) 5, 42, 141, 381, 788, 1289
BslFI GGGAC 2 cut(s) 473, 1171
BslI CCNNNNNNNGG 2 cut(s) 11, 41
BsmAI GTCTC 2 cut(s) 176, 1286
BsmBI CGTCTC 1 cut(s) 176
BsmFI GGGAC 2 cut(s) 473, 1171
BsnI GGCC 7 cut(s) 108, 149, 189, 416, 477, 709, 1140
BsoBI CYCGRG 2 cut(s) 538, 563
Bsp143I GATC 5 cut(s) 720, 762, 840, 895, 942
BspACI CCGC 9 cut(s) 105, 366, 417, 438, 441, 492, 836, 890, 959
BspANI GGCC 7 cut(s) 108, 149, 189, 416, 477, 709, 1140
BspCNI CTCAG 1 cut(s) 943
BspFNI CGCG 1 cut(s) 366
BspHI TCATGA 1 cut(s) 1260
BspLI GGNNCC 4 cut(s) 370, 514, 1000, 1083
BspMI ACCTGC 1 cut(s) 92
BspPI GGATC 1 cut(s) 770
BspQI GCTCTTC 1 cut(s) 666
BspT107I GGYRCC 2 cut(s) 512, 998
BsrDI GCAATG 1 cut(s) 15
BsrFI RCCGGY 5 cut(s) 4, 41, 140, 380, 787
BsrI ACTGG 5 cut(s) 35, 388, 1097, 1314, 1346
BssAI RCCGGY 5 cut(s) 4, 41, 140, 380, 787
BssECI CCNNGG 3 cut(s) 472, 508, 595
BssMI GATC 5 cut(s) 720, 762, 840, 895, 942
BssNI GRCGYC 3 cut(s) 408, 513, 1351
BssT1I CCWWGG 1 cut(s) 508
Bst2UI CCWGG 2 cut(s) 413, 1037
Bst4CI ACNGT 1 cut(s) 1327
Bst6I CTCTTC 1 cut(s) 666
BstACI GRCGYC 3 cut(s) 408, 513, 1351
BstC8I GCNNGC 5 cut(s) 166, 421, 461, 570, 627
BstDEI CTNAG 2 cut(s) 208, 951
BstF5I GGATG 1 cut(s) 591
BstFNI CGCG 1 cut(s) 366
BstH2I RGCGCY 2 cut(s) 516, 632
BstHHI GCGC 3 cut(s) 366, 515, 631
BstKTI GATC 5 cut(s) 723, 765, 843, 898, 945
BstMAI GTCTC 2 cut(s) 176, 1286
BstMBI GATC 5 cut(s) 720, 762, 840, 895, 942
BstMWI GCNNNNNNNGC 5 cut(s) 146, 578, 706, 833, 1067
BstNI CCWGG 2 cut(s) 413, 1037
BstSCI CCNGG 2 cut(s) 411, 1035
BstSFI CTRYAG 1 cut(s) 804
BstUI CGCG 1 cut(s) 366
BstV1I GCAGC 6 cut(s) 82, 410, 481, 1045, 1048, 1181
BstXI CCANNNNNNTGG 1 cut(s) 360
BsuI GTATCC 1 cut(s) 944
BsuRI GGCC 7 cut(s) 108, 149, 189, 416, 477, 709, 1140
BtgZI GCGATG 1 cut(s) 138
BtsCI GGATG 1 cut(s) 591
BtsIMutI CAGTG 3 cut(s) 78, 1307, 1339
BveI ACCTGC 1 cut(s) 92
Cac8I GCNNGC 5 cut(s) 166, 421, 461, 570, 627
CaiI CAGNNNCTG 1 cut(s) 992
CciI TCATGA 1 cut(s) 1260
CfoI GCGC 3 cut(s) 366, 515, 631
Cfr10I RCCGGY 5 cut(s) 4, 41, 140, 380, 787
Cfr13I GGNCC 1 cut(s) 1082
CseI GACGC 3 cut(s) 87, 397, 1340
Csp6I GTAC 3 cut(s) 703, 990, 1277
CspCI CAANNNNNGTGG 2 cut(s) 139, 174
CviAII CATG 5 cut(s) 202, 289, 1077, 1120, 1261
CviQI GTAC 3 cut(s) 703, 990, 1277
DdeI CTNAG 2 cut(s) 208, 951
DinI GGCGCC 1 cut(s) 514
DpnI GATC 5 cut(s) 722, 764, 842, 897, 944
DpnII GATC 5 cut(s) 720, 762, 840, 895, 942
DraI TTTAAA 1 cut(s) 243
EaeI YGGCCR 2 cut(s) 147, 414
Eam1104I CTCTTC 1 cut(s) 666
EarI CTCTTC 1 cut(s) 666
Eco130I CCWWGG 1 cut(s) 508
Eco147I AGGCCT 1 cut(s) 709
Eco32I GATATC 1 cut(s) 1305
Eco47I GGWCC 1 cut(s) 1082
Eco88I CYCGRG 2 cut(s) 538, 563
EcoO109I RGGNCCY 1 cut(s) 1082
EcoRII CCWGG 2 cut(s) 411, 1035
EcoRV GATATC 1 cut(s) 1305
EcoT14I CCWWGG 1 cut(s) 508
EcoT22I ATGCAT 1 cut(s) 1323
EgeI GGCGCC 1 cut(s) 514
EheI GGCGCC 1 cut(s) 514
ErhI CCWWGG 1 cut(s) 508
Esp3I CGTCTC 1 cut(s) 176
FaeI CATG 5 cut(s) 205, 292, 1080, 1123, 1264
FalI AAGNNNNNCTT 2 cut(s) 566, 598
FaqI GGGAC 2 cut(s) 473, 1171
FatI CATG 5 cut(s) 201, 288, 1076, 1119, 1260
FauI CCCGC 1 cut(s) 499
FbaI TGATCA 1 cut(s) 942
FblI GTMKAC 1 cut(s) 881
FokI GGATG 1 cut(s) 578
FspBI CTAG 5 cut(s) 185, 293, 545, 974, 1031
GlaI GCGC 3 cut(s) 365, 514, 630
GsuI CTGGAG 1 cut(s) 1331
HaeII RGCGCY 2 cut(s) 516, 632
HaeIII GGCC 7 cut(s) 108, 149, 189, 416, 477, 709, 1140
HapII CCGG 6 cut(s) 5, 42, 141, 381, 788, 1289
HgaI GACGC 3 cut(s) 87, 397, 1340
HhaI GCGC 3 cut(s) 366, 515, 631
Hin1I GRCGYC 3 cut(s) 408, 513, 1351
Hin1II CATG 5 cut(s) 205, 292, 1080, 1123, 1264
Hin6I GCGC 3 cut(s) 364, 513, 629
HinP1I GCGC 3 cut(s) 364, 513, 629
HincII GTYRAC 1 cut(s) 25
HindII GTYRAC 1 cut(s) 25
HinfI GANTC 6 cut(s) 181, 402, 530, 821, 1126, 1313
HpaII CCGG 6 cut(s) 5, 42, 141, 381, 788, 1289
HphI GGTGA 4 cut(s) 31, 88, 166, 868
Hpy166II GTNNAC 3 cut(s) 25, 882, 1162
Hpy188III TCNNGA 3 cut(s) 313, 1150, 1261
Hpy8I GTNNAC 3 cut(s) 25, 882, 1162
Hpy99I CGWCG 1 cut(s) 1356
HpyAV CCTTC 5 cut(s) 5, 186, 232, 903, 1204
HpyCH4III ACNGT 1 cut(s) 1327
HpyCH4IV ACGT 1 cut(s) 65
HpyCH4V TGCA 4 cut(s) 87, 426, 1169, 1321
HpyF10VI GCNNNNNNNGC 5 cut(s) 146, 578, 706, 833, 1067
HpyF3I CTNAG 2 cut(s) 208, 951
HpySE526I ACGT 1 cut(s) 65
Hsp92I GRCGYC 3 cut(s) 408, 513, 1351
Hsp92II CATG 5 cut(s) 205, 292, 1080, 1123, 1264
HspAI GCGC 3 cut(s) 364, 513, 629
KasI GGCGCC 1 cut(s) 512
Ksp22I TGATCA 1 cut(s) 942
Kzo9I GATC 5 cut(s) 720, 762, 840, 895, 942
LguI GCTCTTC 1 cut(s) 666
LmnI GCTCC 3 cut(s) 251, 331, 368
Lsp1109I GCAGC 6 cut(s) 82, 410, 481, 1045, 1048, 1181
LweI GCATC 3 cut(s) 54, 1155, 1308
MaeI CTAG 5 cut(s) 185, 293, 545, 974, 1031
MaeII ACGT 1 cut(s) 65
MaeIII GTNAC 2 cut(s) 37, 682
MalI GATC 5 cut(s) 722, 764, 842, 897, 944
MboI GATC 5 cut(s) 720, 762, 840, 895, 942
MboII GAAGA 5 cut(s) 385, 511, 586, 683, 1135
MfeI CAATTG 1 cut(s) 1104
MlsI TGGCCA 1 cut(s) 149
MluCI AATT 4 cut(s) 132, 651, 870, 1104
MluNI TGGCCA 1 cut(s) 149
Mly113I GGCGCC 1 cut(s) 513
MlyI GAGTC 1 cut(s) 1322
MmeI TCCRAC 1 cut(s) 1229
Mox20I TGGCCA 1 cut(s) 149
Mph1103I ATGCAT 1 cut(s) 1323
MroXI GAANNNNTTC 1 cut(s) 820
MscI TGGCCA 1 cut(s) 149
MseI TTAA 5 cut(s) 242, 258, 584, 639, 1369
MslI CAYNNNNRTG 2 cut(s) 358, 788
Msp20I TGGCCA 1 cut(s) 149
MspA1I CMGCKG 2 cut(s) 423, 494
MspI CCGG 6 cut(s) 5, 42, 141, 381, 788, 1289
MspR9I CCNGG 2 cut(s) 413, 1037
MunI CAATTG 1 cut(s) 1104
MvaI CCWGG 2 cut(s) 413, 1037
MvnI CGCG 1 cut(s) 366
MwoI GCNNNNNNNGC 5 cut(s) 146, 578, 706, 833, 1067
NarI GGCGCC 1 cut(s) 513
NdeII GATC 5 cut(s) 720, 762, 840, 895, 942
NlaIII CATG 5 cut(s) 205, 292, 1080, 1123, 1264
NlaIV GGNNCC 4 cut(s) 370, 514, 1000, 1083
NmeAIII GCCGAG 1 cut(s) 453
NmuCI GTSAC 2 cut(s) 37, 682
NsiI ATGCAT 1 cut(s) 1323
OliI CACNNNNGTG 1 cut(s) 788
PaeR7I CTCGAG 2 cut(s) 538, 563
PagI TCATGA 1 cut(s) 1260
PceI AGGCCT 1 cut(s) 709
PciSI GCTCTTC 1 cut(s) 666
PcsI WCGNNNNNNNCGW 2 cut(s) 405, 480
PdmI GAANNNNTTC 1 cut(s) 820
PfeI GAWTC 5 cut(s) 181, 402, 530, 821, 1126
PleI GAGTC 1 cut(s) 1321
PluTI GGCGCC 1 cut(s) 516
PpsI GAGTC 1 cut(s) 1321
PpuMI RGGWCCY 1 cut(s) 1082
Psp1406I AACGTT 1 cut(s) 65
Psp5II RGGWCCY 1 cut(s) 1082
Psp6I CCWGG 2 cut(s) 411, 1035
PspGI CCWGG 2 cut(s) 411, 1035
PspN4I GGNNCC 4 cut(s) 370, 514, 1000, 1083
PspPI GGNCC 1 cut(s) 1082
PspPPI RGGWCCY 1 cut(s) 1082
PspXI VCTCGAGB 2 cut(s) 538, 563
PstNI CAGNNNCTG 1 cut(s) 992
PvuII CAGCTG 1 cut(s) 423
RsaI GTAC 3 cut(s) 704, 991, 1278
RsaNI GTAC 3 cut(s) 703, 990, 1277
RseI CAYNNNNRTG 2 cut(s) 358, 788
SapI GCTCTTC 1 cut(s) 666
SaqAI TTAA 5 cut(s) 242, 258, 584, 639, 1369
Sau3AI GATC 5 cut(s) 720, 762, 840, 895, 942
Sau96I GGNCC 1 cut(s) 1082
SchI GAGTC 1 cut(s) 1322
ScrFI CCNGG 2 cut(s) 413, 1037
SfaNI GCATC 3 cut(s) 54, 1155, 1308
SfcI CTRYAG 1 cut(s) 804
SfoI GGCGCC 1 cut(s) 514
Sfr274I CTCGAG 2 cut(s) 538, 563
SgrAI CRCCGGYG 1 cut(s) 787
SinI GGWCC 1 cut(s) 1082
SlaI CTCGAG 2 cut(s) 538, 563
SmiMI CAYNNNNRTG 2 cut(s) 358, 788
SmlI CTYRAG 2 cut(s) 538, 563
SmoI CTYRAG 2 cut(s) 538, 563
SpeI ACTAGT 1 cut(s) 1030
Sse9I AATT 4 cut(s) 132, 651, 870, 1104
SseBI AGGCCT 1 cut(s) 709
SsiI CCGC 9 cut(s) 105, 366, 417, 438, 441, 492, 836, 890, 959
SspDI GGCGCC 1 cut(s) 512
SspMI CTAG 5 cut(s) 185, 293, 545, 974, 1031
StuI AGGCCT 1 cut(s) 709
StyD4I CCNGG 2 cut(s) 411, 1035
StyI CCWWGG 1 cut(s) 508
TaaI ACNGT 1 cut(s) 1327
TaiI ACGT 1 cut(s) 68
TaqI TCGA 6 cut(s) 539, 549, 564, 615, 1129, 1316
TasI AATT 4 cut(s) 132, 651, 870, 1104
TatI WGTACW 2 cut(s) 702, 1276
TauI GCSGC 5 cut(s) 108, 419, 440, 443, 839
TfiI GAWTC 5 cut(s) 181, 402, 530, 821, 1126
Tru1I TTAA 5 cut(s) 242, 258, 584, 639, 1369
Tru9I TTAA 5 cut(s) 242, 258, 584, 639, 1369
TscAI CASTG 3 cut(s) 78, 1314, 1346
TseFI GTSAC 2 cut(s) 37, 682
TseI GCWGC 6 cut(s) 95, 423, 494, 1058, 1061, 1169
Tsp45I GTSAC 2 cut(s) 37, 682
TspDTI ATGAA 6 cut(s) 385, 511, 684, 737, 1136, 1246
TspGWI ACGGA 1 cut(s) 729
TspRI CASTG 3 cut(s) 78, 1314, 1346
VpaK11BI GGWCC 1 cut(s) 1082
XapI RAATTY 2 cut(s) 132, 651
XcmI CCANNNNNNNNNTGG 3 cut(s) 157, 1033, 1220
XhoI CTCGAG 2 cut(s) 538, 563
XmiI GTMKAC 1 cut(s) 881
XmnI GAANNNNTTC 1 cut(s) 820
XspI CTAG 5 cut(s) 185, 293, 545, 974, 1031
Zsp2I ATGCAT 1 cut(s) 1323
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.