Rh7DG465000
ERF Family

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
Physical Location & Seq
Reverse (-)
66206490 .. 66211178
4689 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG465000.1

Sequence Viewer

Length: 1281 bp
ATGTTTGATAGTCAGCTTTTGACATCATTCACATCCTCTCTCTACATAGCCGGTTTGGCCACATCGCTTGTGGCAAGCCGTCTCACCAAGATTCTAGGCCGGAGGAACATCATGCTCTTAGGTGGTTCTACCTTCCTTGTTGGGTCTGCTTTAAATGGTGGAGCTGTTAATGTTGCAATGCTCATCTTGGGTCGTATCATGCTAGGGTTTGGAGTTGGTTTCACGAACCAATCTGCTCCCATCTACCTCTCCGAAGTCGCACCACCAAAATGGCGCGGAGCCTTCAGCACCGGCTTCCAATTCTTCATCGGAATCGGTGTCCTGGCCTCCAGCTGCATAAACTTCGCCGCCGCCAAGCACGAACACGGCTGGCGTTTCTCCCTCGGCCTCGCCGTAGTCCCCGCTGCCATAATGACCCTTGGCGCCGTCTTCATTTCGGACTCCCCCTCAAGCCTAGTCGAACGCAACAAGGTCGAGCAAGCCAAGAAAGCTCTAATCCACATACGAGGCAAAGACACAGACATCGAACCAGAGCTGGCGCTTCTCATTAAAAATAGTGAAATTGCCAAAGCTATCAATGAGGAGCCATTTAGGATTATATTTCAGAGGCAGTACAGGCCTCAACTTGTGATCGGAATGATTGCCATTCCGTTTTTTCATCAGATGTCTGGGATCAACGCCGTTGCGTTTTACGCGCCGGTGCTGTTTCAGTCTGTAGGGTTGGGAAACGATTCTGCTCTGATTGCCGCGATCATACTCGGAATGGTTAATATCCTTTCAATTCTTGTGTCTACTTATGCGGTTGATCGGTGTGGGAGGAGATTTTTGTTGATGGAAGCTGGTATCCAAATGATCATTACTGAGGTTGCGGTGGCTATTGTTCTAGCACTAACAACAGGTACTGACGGCACCAAGCGTATCTCAAAGGGCTATGCCATACTAGTCCTGGTGTTGATGTGTTTCTATGCTGCTGCTTTTGCTTGGTCATGGGGTCCTTTGAACTGGCTCATACCAATTGAGATATTCCCCATGAAGATTCGACCCATAGGCCAGAGCATCGGGATTGCTGTGAACTTTGCAGCTACATTTTTGGTGTCCCAAACCTTCTTGTCAATGTTGTGCCATTTCAAATATGGCACATTCCTGTTCTATGGAGGTTGGATATTCATCATGACCATTTTTGTTGCACTGTTCTTGCCGGAGACTAAAGGGATACCACTGGAGTCGATGCATACGGTGTGGGAGAAGCACTGGTATTGGCGTCGGTTTGTTCTGGGTTAA

Protein Analysis

426

Amino Acids

46.73

Weight (kDa)

9.57

Isoelectric Point (pI)

45.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sugar_tr PF00083 6 - 414 1.6e-97 Sugar (and other) transporter
MFS_1 PF07690 10 - 359 1.3e-22 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 422, 908
AccI GTMKAC 1 cut(s) 791
AccII CGCG 3 cut(s) 276, 695, 749
AciI CCGC 7 cut(s) 276, 348, 351, 402, 747, 800, 869
AclWI GGATC 1 cut(s) 680
AcoI YGGCCR 1 cut(s) 57
AcuI CTGAAG 1 cut(s) 268
AcyI GRCGYC 2 cut(s) 423, 1261
AfaI GTAC 2 cut(s) 614, 901
AgsI TTSAA 3 cut(s) 780, 1000, 1129
AhlI ACTAGT 1 cut(s) 940
AjnI CCWGG 2 cut(s) 321, 945
AluBI AGCT 8 cut(s) 16, 164, 333, 491, 535, 572, 839, 1082
AluI AGCT 8 cut(s) 16, 164, 333, 491, 535, 572, 839, 1082
Alw26I GTCTC 2 cut(s) 86, 1196
AlwI GGATC 1 cut(s) 680
AlwNI CAGNNNCTG 1 cut(s) 902
AoxI GGCC 6 cut(s) 57, 97, 324, 385, 617, 1048
ApeKI GCWGC 5 cut(s) 333, 404, 968, 971, 1079
Asp700I GAANNNNTTC 1 cut(s) 730
AspLEI GCGC 4 cut(s) 276, 425, 541, 697
AspS9I GGNCC 1 cut(s) 992
AsuHPI GGTGA 1 cut(s) 76
AvaII GGWCC 1 cut(s) 992
BalI TGGCCA 1 cut(s) 59
BanI GGYRCC 2 cut(s) 422, 908
BbsI GAAGAC 1 cut(s) 421
BbvI GCAGC 5 cut(s) 320, 391, 955, 958, 1091
BccI CCATC 2 cut(s) 248, 826
BceAI ACGGC 6 cut(s) 63, 377, 382, 410, 665, 922
BcgI CGANNNNNNTGC 4 cut(s) 325, 359, 454, 488
BciT130I CCWGG 2 cut(s) 323, 947
BciVI GTATCC 2 cut(s) 854, 1206
BclI TGATCA 1 cut(s) 852
BcoDI GTCTC 2 cut(s) 86, 1196
BcuI ACTAGT 1 cut(s) 940
BfaI CTAG 5 cut(s) 95, 203, 455, 884, 941
BfmI CTRYAG 1 cut(s) 714
BfoI RGCGCY 2 cut(s) 426, 542
BfuI GTATCC 2 cut(s) 854, 1206
BglI GCCNNNNNGGC 1 cut(s) 56
BisI GCNGC 8 cut(s) 334, 348, 351, 405, 747, 969, 972, 1080
BlsI GCNGC 8 cut(s) 335, 349, 352, 406, 748, 970, 973, 1081
Bme1390I CCNGG 2 cut(s) 323, 947
Bme18I GGWCC 1 cut(s) 992
BmgT120I GGNCC 1 cut(s) 992
BmiI GGNNCC 5 cut(s) 280, 424, 585, 910, 993
BmrFI CCNGG 2 cut(s) 323, 947
BmsI GCATC 2 cut(s) 1065, 1218
BpiI GAAGAC 1 cut(s) 421
BpmI CTGGAG 2 cut(s) 313, 1241
BpuEI CTTGAG 1 cut(s) 433
BsaBI GATNNNNATC 1 cut(s) 1166
BsaHI GRCGYC 2 cut(s) 423, 1261
BsaJI CCNNGG 2 cut(s) 382, 418
Bse118I RCCGGY 3 cut(s) 50, 290, 697
Bse1I ACTGG 3 cut(s) 1007, 1224, 1256
Bse3DI GCAATG 1 cut(s) 183
Bse8I GATNNNNATC 1 cut(s) 1166
BseBI CCWGG 2 cut(s) 323, 947
BseDI CCNNGG 2 cut(s) 382, 418
BseGI GGATG 1 cut(s) 32
BseJI GATNNNNATC 1 cut(s) 1166
BseMI GCAATG 1 cut(s) 183
BseMII CTCAG 1 cut(s) 852
BseNI ACTGG 3 cut(s) 1007, 1224, 1256
BseRI GAGGAG 2 cut(s) 596, 832
BseXI GCAGC 5 cut(s) 320, 391, 955, 958, 1091
Bsh1236I CGCG 3 cut(s) 276, 695, 749
BshFI GGCC 6 cut(s) 59, 99, 326, 387, 619, 1050
BshNI GGYRCC 2 cut(s) 422, 908
BsiSI CCGG 5 cut(s) 51, 100, 291, 698, 1199
BslFI GGGAC 2 cut(s) 383, 1081
BsmAI GTCTC 2 cut(s) 86, 1196
BsmBI CGTCTC 1 cut(s) 86
BsmFI GGGAC 2 cut(s) 383, 1081
BsnI GGCC 6 cut(s) 59, 99, 326, 387, 619, 1050
Bsp143I GATC 5 cut(s) 630, 672, 750, 805, 852
BspACI CCGC 7 cut(s) 276, 348, 351, 402, 747, 800, 869
BspANI GGCC 6 cut(s) 59, 99, 326, 387, 619, 1050
BspCNI CTCAG 1 cut(s) 853
BspFNI CGCG 3 cut(s) 276, 695, 749
BspHI TCATGA 1 cut(s) 1170
BspLI GGNNCC 5 cut(s) 280, 424, 585, 910, 993
BspPI GGATC 1 cut(s) 680
BspT107I GGYRCC 2 cut(s) 422, 908
BsrDI GCAATG 1 cut(s) 183
BsrFI RCCGGY 3 cut(s) 50, 290, 697
BsrI ACTGG 3 cut(s) 1007, 1224, 1256
BssAI RCCGGY 3 cut(s) 50, 290, 697
BssECI CCNNGG 2 cut(s) 382, 418
BssMI GATC 5 cut(s) 630, 672, 750, 805, 852
BssNI GRCGYC 2 cut(s) 423, 1261
BssT1I CCWWGG 1 cut(s) 418
Bst2UI CCWGG 2 cut(s) 323, 947
Bst4CI ACNGT 2 cut(s) 1191, 1237
BstACI GRCGYC 2 cut(s) 423, 1261
BstC8I GCNNGC 4 cut(s) 76, 371, 480, 537
BstDEI CTNAG 2 cut(s) 118, 861
BstF5I GGATG 1 cut(s) 32
BstFNI CGCG 3 cut(s) 276, 695, 749
BstH2I RGCGCY 2 cut(s) 426, 542
BstHHI GCGC 4 cut(s) 276, 425, 541, 697
BstKTI GATC 5 cut(s) 633, 675, 753, 808, 855
BstMAI GTCTC 2 cut(s) 86, 1196
BstMBI GATC 5 cut(s) 630, 672, 750, 805, 852
BstMWI GCNNNNNNNGC 6 cut(s) 56, 488, 616, 692, 743, 977
BstNI CCWGG 2 cut(s) 323, 947
BstSCI CCNGG 2 cut(s) 321, 945
BstSFI CTRYAG 1 cut(s) 714
BstUI CGCG 3 cut(s) 276, 695, 749
BstV1I GCAGC 5 cut(s) 320, 391, 955, 958, 1091
BstV2I GAAGAC 1 cut(s) 421
BstXI CCANNNNNNTGG 1 cut(s) 270
BsuI GTATCC 2 cut(s) 854, 1206
BsuRI GGCC 6 cut(s) 59, 99, 326, 387, 619, 1050
BtgZI GCGATG 1 cut(s) 48
BtsCI GGATG 1 cut(s) 32
BtsIMutI CAGTG 3 cut(s) 1187, 1217, 1249
Cac8I GCNNGC 4 cut(s) 76, 371, 480, 537
CaiI CAGNNNCTG 1 cut(s) 902
CciI TCATGA 1 cut(s) 1170
CfoI GCGC 4 cut(s) 276, 425, 541, 697
Cfr10I RCCGGY 3 cut(s) 50, 290, 697
Cfr13I GGNCC 1 cut(s) 992
CseI GACGC 1 cut(s) 1250
Csp6I GTAC 2 cut(s) 613, 900
CspCI CAANNNNNGTGG 2 cut(s) 49, 84
CviAII CATG 5 cut(s) 112, 199, 987, 1030, 1171
CviQI GTAC 2 cut(s) 613, 900
DdeI CTNAG 2 cut(s) 118, 861
DinI GGCGCC 1 cut(s) 424
DpnI GATC 5 cut(s) 632, 674, 752, 807, 854
DpnII GATC 5 cut(s) 630, 672, 750, 805, 852
DraI TTTAAA 1 cut(s) 153
EaeI YGGCCR 1 cut(s) 57
Eco130I CCWWGG 1 cut(s) 418
Eco147I AGGCCT 1 cut(s) 619
Eco47I GGWCC 1 cut(s) 992
Eco57I CTGAAG 1 cut(s) 268
EcoO109I RGGNCCY 1 cut(s) 992
EcoRII CCWGG 2 cut(s) 321, 945
EcoT14I CCWWGG 1 cut(s) 418
EcoT22I ATGCAT 1 cut(s) 1233
EgeI GGCGCC 1 cut(s) 424
EheI GGCGCC 1 cut(s) 424
ErhI CCWWGG 1 cut(s) 418
Esp3I CGTCTC 1 cut(s) 86
FaeI CATG 5 cut(s) 115, 202, 990, 1033, 1174
FaqI GGGAC 2 cut(s) 383, 1081
FatI CATG 5 cut(s) 111, 198, 986, 1029, 1170
FauI CCCGC 1 cut(s) 409
FbaI TGATCA 1 cut(s) 852
FblI GTMKAC 1 cut(s) 791
Fnu4HI GCNGC 8 cut(s) 334, 348, 351, 405, 747, 969, 972, 1080
FokI GGATG 1 cut(s) 19
Fsp4HI GCNGC 8 cut(s) 334, 348, 351, 405, 747, 969, 972, 1080
FspBI CTAG 5 cut(s) 95, 203, 455, 884, 941
GlaI GCGC 4 cut(s) 275, 424, 540, 696
GluI GCNGC 8 cut(s) 334, 348, 351, 405, 747, 969, 972, 1080
GsuI CTGGAG 2 cut(s) 313, 1241
HaeII RGCGCY 2 cut(s) 426, 542
HaeIII GGCC 6 cut(s) 59, 99, 326, 387, 619, 1050
HapII CCGG 5 cut(s) 51, 100, 291, 698, 1199
HgaI GACGC 1 cut(s) 1250
HhaI GCGC 4 cut(s) 276, 425, 541, 697
Hin1I GRCGYC 2 cut(s) 423, 1261
Hin1II CATG 5 cut(s) 115, 202, 990, 1033, 1174
Hin6I GCGC 4 cut(s) 274, 423, 539, 695
HinP1I GCGC 4 cut(s) 274, 423, 539, 695
HinfI GANTC 6 cut(s) 91, 312, 440, 731, 1036, 1223
HpaII CCGG 5 cut(s) 51, 100, 291, 698, 1199
HphI GGTGA 1 cut(s) 76
Hpy166II GTNNAC 2 cut(s) 792, 1072
Hpy188I TCNGA 8 cut(s) 253, 311, 439, 606, 635, 663, 741, 761
Hpy188III TCNNGA 3 cut(s) 223, 1060, 1171
Hpy8I GTNNAC 2 cut(s) 792, 1072
Hpy99I CGWCG 1 cut(s) 1266
HpyAV CCTTC 3 cut(s) 142, 292, 1114
HpyCH4III ACNGT 2 cut(s) 1191, 1237
HpyCH4V TGCA 5 cut(s) 176, 336, 1079, 1187, 1231
HpyF10VI GCNNNNNNNGC 6 cut(s) 56, 488, 616, 692, 743, 977
HpyF3I CTNAG 2 cut(s) 118, 861
Hsp92I GRCGYC 2 cut(s) 423, 1261
Hsp92II CATG 5 cut(s) 115, 202, 990, 1033, 1174
HspAI GCGC 4 cut(s) 274, 423, 539, 695
KasI GGCGCC 1 cut(s) 422
Ksp22I TGATCA 1 cut(s) 852
Kzo9I GATC 5 cut(s) 630, 672, 750, 805, 852
LmnI GCTCC 4 cut(s) 161, 241, 278, 583
Lsp1109I GCAGC 5 cut(s) 320, 391, 955, 958, 1091
LweI GCATC 2 cut(s) 1065, 1218
MaeI CTAG 5 cut(s) 95, 203, 455, 884, 941
MalI GATC 5 cut(s) 632, 674, 752, 807, 854
MboI GATC 5 cut(s) 630, 672, 750, 805, 852
MboII GAAGA 3 cut(s) 295, 421, 1045
MfeI CAATTG 1 cut(s) 1014
MlsI TGGCCA 1 cut(s) 59
MluCI AATT 4 cut(s) 299, 561, 780, 1014
MluNI TGGCCA 1 cut(s) 59
Mly113I GGCGCC 1 cut(s) 423
MlyI GAGTC 2 cut(s) 434, 1232
MmeI TCCRAC 1 cut(s) 1139
Mox20I TGGCCA 1 cut(s) 59
Mph1103I ATGCAT 1 cut(s) 1233
MroXI GAANNNNTTC 1 cut(s) 730
MscI TGGCCA 1 cut(s) 59
MseI TTAA 5 cut(s) 152, 168, 549, 768, 1279
MslI CAYNNNNRTG 1 cut(s) 268
Msp20I TGGCCA 1 cut(s) 59
MspA1I CMGCKG 2 cut(s) 333, 404
MspI CCGG 5 cut(s) 51, 100, 291, 698, 1199
MspR9I CCNGG 2 cut(s) 323, 947
MunI CAATTG 1 cut(s) 1014
MvaI CCWGG 2 cut(s) 323, 947
MvnI CGCG 3 cut(s) 276, 695, 749
MwoI GCNNNNNNNGC 6 cut(s) 56, 488, 616, 692, 743, 977
NarI GGCGCC 1 cut(s) 423
NdeII GATC 5 cut(s) 630, 672, 750, 805, 852
NlaIII CATG 5 cut(s) 115, 202, 990, 1033, 1174
NlaIV GGNNCC 5 cut(s) 280, 424, 585, 910, 993
NmeAIII GCCGAG 1 cut(s) 363
NsiI ATGCAT 1 cut(s) 1233
PagI TCATGA 1 cut(s) 1170
PceI AGGCCT 1 cut(s) 619
PcsI WCGNNNNNNNCGW 1 cut(s) 390
PdmI GAANNNNTTC 1 cut(s) 730
PfeI GAWTC 4 cut(s) 91, 312, 731, 1036
PkrI GCNGC 8 cut(s) 335, 349, 352, 406, 748, 970, 973, 1081
PleI GAGTC 2 cut(s) 434, 1231
PluTI GGCGCC 1 cut(s) 426
PpsI GAGTC 2 cut(s) 434, 1231
PpuMI RGGWCCY 1 cut(s) 992
Psp5II RGGWCCY 1 cut(s) 992
Psp6I CCWGG 2 cut(s) 321, 945
PspGI CCWGG 2 cut(s) 321, 945
PspN4I GGNNCC 5 cut(s) 280, 424, 585, 910, 993
PspPI GGNCC 1 cut(s) 992
PspPPI RGGWCCY 1 cut(s) 992
PstNI CAGNNNCTG 1 cut(s) 902
PvuII CAGCTG 1 cut(s) 333
RsaI GTAC 2 cut(s) 614, 901
RsaNI GTAC 2 cut(s) 613, 900
RseI CAYNNNNRTG 1 cut(s) 268
SaqAI TTAA 5 cut(s) 152, 168, 549, 768, 1279
SatI GCNGC 8 cut(s) 334, 348, 351, 405, 747, 969, 972, 1080
Sau3AI GATC 5 cut(s) 630, 672, 750, 805, 852
Sau96I GGNCC 1 cut(s) 992
SchI GAGTC 2 cut(s) 434, 1232
ScrFI CCNGG 2 cut(s) 323, 947
SfaNI GCATC 2 cut(s) 1065, 1218
SfcI CTRYAG 1 cut(s) 714
SfoI GGCGCC 1 cut(s) 424
SgrAI CRCCGGYG 1 cut(s) 697
SinI GGWCC 1 cut(s) 992
SmiMI CAYNNNNRTG 1 cut(s) 268
SmlI CTYRAG 1 cut(s) 448
SmoI CTYRAG 1 cut(s) 448
SpeI ACTAGT 1 cut(s) 940
Sse9I AATT 4 cut(s) 299, 561, 780, 1014
SseBI AGGCCT 1 cut(s) 619
SsiI CCGC 7 cut(s) 276, 348, 351, 402, 747, 800, 869
SspDI GGCGCC 1 cut(s) 422
SspMI CTAG 5 cut(s) 95, 203, 455, 884, 941
StuI AGGCCT 1 cut(s) 619
StyD4I CCNGG 2 cut(s) 321, 945
StyI CCWWGG 1 cut(s) 418
TaaI ACNGT 2 cut(s) 1191, 1237
TaqI TCGA 5 cut(s) 459, 474, 525, 1039, 1226
TasI AATT 4 cut(s) 299, 561, 780, 1014
TatI WGTACW 1 cut(s) 612
TauI GCSGC 3 cut(s) 350, 353, 749
TfiI GAWTC 4 cut(s) 91, 312, 731, 1036
Tru1I TTAA 5 cut(s) 152, 168, 549, 768, 1279
Tru9I TTAA 5 cut(s) 152, 168, 549, 768, 1279
TscAI CASTG 3 cut(s) 1194, 1224, 1256
TseI GCWGC 5 cut(s) 333, 404, 968, 971, 1079
TspDTI ATGAA 5 cut(s) 295, 421, 647, 1046, 1156
TspGWI ACGGA 1 cut(s) 639
TspRI CASTG 3 cut(s) 1194, 1224, 1256
VpaK11BI GGWCC 1 cut(s) 992
XcmI CCANNNNNNNNNTGG 3 cut(s) 67, 943, 1130
XmiI GTMKAC 1 cut(s) 791
XmnI GAANNNNTTC 1 cut(s) 730
XspI CTAG 5 cut(s) 95, 203, 455, 884, 941
Zsp2I ATGCAT 1 cut(s) 1233
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.