Rh7DG464800
ERF Family

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
Physical Location & Seq
Reverse (-)
66183527 .. 66188520
4994 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG464800.1

Sequence Viewer

Length: 1386 bp
ATGCGACCGTTCCTTCGAAAATTCTTTCCATCCATACTGAGGAAGGAATCAGGGACCAAACCAAACATTTACTGCGTGTATGATAGTCAGCTTTTAACATTATTCACTTCCTCTCTCTATTTAGCCGGTTTGGCTGCATCGCTTGTAGCGAGCCGTCTCACCAAGATTCTAGGCCGGAGGAACATCATGCTCTTGGGTGGTTCTACTTTCCTCGTTGGGGCTGCTTTAAACGGTGGAGCTGTTAATATTGCCATGCTGATCTTGGGTCGTATCTTGCTCGGGTTTGGAGTTGGTTTCACTAACCAATCTGCTCCCATCTACCTCTCCGAAGTCGCGCCACCAAAATGGCGCGGAGCCTTCAATACTGGCTTCCAGTTCTTCATCGGAATCGGCGTCCTGGCCGCCAACTGCATAAACTACGCCACCTCCAAGCACGAACACGGCTGGCGTATCTCCCTTGGCCTCGCCATAGTCCCGGCTGCCATAATGACCTTTGGTGCTATATTCATTTCGGACTCCCCCTCGAGCCTAGTCGAACGCAACAAGGTCGAGCAAGCCAAGAAAGCTCTAATCCACATACGAGGCAAAGACACAGACATCGAACCAGAGCTGGCGCTTCTCATTAAAAATAGTGAAATTGCCAAAGCTATCAATGAGGAGCCATTTAGGATTATATTTCAGAGGCAGTACAGGCCTCAACTTGTGATTGGAATGATTGCCATTCCGTTTTTTCAGCAGGTGACTGGGATCAACATCATTGCTTTTTACGCGCCTGTACTGTTTCAATCAGTCGGTTTTGGAAACGATTCCGCTCTAATTGCAGCCATCATACTCGGAATGGTTAATATTGTTTCGATTCTTGTGTCTTCTTATGCGGTTGATCGGTGTGGGAGGAGGATTTTGTTTCTGCAAGGTGGTATCCAAATGTTCATTACTCAGGTTGGGGTGGCTATTGTTCTAGCACTTACGACAGGTACTGACGGCACCAAGCATATTACAAAGGGCTATGCCATACTGGTCCTAGTGTTGATGTGTTTCTATGCTGCCGGTTTTGGTTGGTCATGGGGTCCTTTGAGTTGGCTCGTACCAAGTGAGATATACCCCCTGAAGATTCGACCCATAGGCCAGAGCATGGGGGTTGGTATGAACTTTGCAACCACATTTGTGTTGTCCCAAACCTTCTTGTCAATGTTGTGCCATTTCAAATATGGGACATTCCTGTTCTATGGAGGTTGGATATTCGCCATGACCATTTTTGTTGCACTGTTCTTGCCGGAGACTAAAGGGTTACCACTGGACTTGGTGCATACAGTGTGGGAGAAGCACTGGTATTGGCGTCGGTTTGTTCAGAGTAAACCCGAGGACACTATTAATCATGAATATTAG

Protein Analysis

461

Amino Acids

51.01

Weight (kDa)

9.61

Isoelectric Point (pI)

48.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sugar_tr PF00083 24 - 439 3.1e-102 Sugar (and other) transporter
MFS_1 PF07690 29 - 369 8.5e-27 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 727
Acc36I ACCTGC 1 cut(s) 727
AccB1I GGYRCC 1 cut(s) 983
AccB7I CCANNNNNTGG 1 cut(s) 1132
AccBSI CCGCTC 1 cut(s) 812
AccII CGCG 3 cut(s) 335, 351, 770
AciI CCGC 4 cut(s) 351, 402, 810, 875
AclWI GGATC 1 cut(s) 755
AcoI YGGCCR 1 cut(s) 399
AcsI RAATTY 1 cut(s) 20
AcuI CTGAAG 1 cut(s) 1127
AcyI GRCGYC 2 cut(s) 393, 1336
AfaI GTAC 4 cut(s) 689, 777, 976, 1086
AfiI CCNNNNNNNGG 3 cut(s) 39, 217, 1132
AgsI TTSAA 3 cut(s) 361, 785, 1204
AjnI CCWGG 1 cut(s) 396
AleI CACNNNNGTG 1 cut(s) 1163
AluBI AGCT 5 cut(s) 91, 239, 566, 610, 647
AluI AGCT 5 cut(s) 91, 239, 566, 610, 647
Alw26I GTCTC 2 cut(s) 161, 1271
AlwI GGATC 1 cut(s) 755
AlwNI CAGNNNCTG 1 cut(s) 977
Ama87I CYCGRG 3 cut(s) 278, 523, 1358
AoxI GGCC 5 cut(s) 172, 399, 460, 692, 1123
ApeKI GCWGC 5 cut(s) 134, 221, 479, 821, 1043
ApoI RAATTY 1 cut(s) 20
ArsI GACNNNNNNTTYG 1 cut(s) 29
AseI ATTAAT 1 cut(s) 1371
Asp700I GAANNNNTTC 1 cut(s) 805
AspLEI GCGC 4 cut(s) 337, 351, 616, 772
AspS9I GGNCC 3 cut(s) 54, 1018, 1067
AsuC2I CCSGG 1 cut(s) 476
AsuHPI GGTGA 2 cut(s) 151, 751
AsuII TTCGAA 1 cut(s) 16
AvaI CYCGRG 3 cut(s) 278, 523, 1358
AvaII GGWCC 3 cut(s) 54, 1018, 1067
BanI GGYRCC 1 cut(s) 983
BbsI GAAGAC 1 cut(s) 858
BbvI GCAGC 5 cut(s) 121, 208, 466, 833, 1030
BccI CCATC 3 cut(s) 37, 323, 833
BceAI ACGGC 3 cut(s) 138, 457, 997
BcgI CGANNNNNNTGC 2 cut(s) 529, 563
BciT130I CCWGG 1 cut(s) 398
BciVI GTATCC 1 cut(s) 929
BcnI CCSGG 1 cut(s) 476
BcoDI GTCTC 2 cut(s) 161, 1271
BfaI CTAG 4 cut(s) 170, 530, 959, 1022
BfoI RGCGCY 1 cut(s) 617
BfuAI ACCTGC 1 cut(s) 727
BfuI GTATCC 1 cut(s) 929
BglI GCCNNNNNGGC 1 cut(s) 131
BisI GCNGC 6 cut(s) 135, 222, 402, 480, 822, 1044
BlsI GCNGC 6 cut(s) 136, 223, 403, 481, 823, 1045
Bme1390I CCNGG 2 cut(s) 398, 476
Bme18I GGWCC 3 cut(s) 54, 1018, 1067
BmeT110I CYCGRG 3 cut(s) 278, 523, 1358
BmgT120I GGNCC 3 cut(s) 54, 1018, 1067
BmiI GGNNCC 5 cut(s) 55, 355, 660, 985, 1068
BmrFI CCNGG 2 cut(s) 398, 476
BmrI ACTGGG 1 cut(s) 753
BmsI GCATC 1 cut(s) 146
BmuI ACTGGG 1 cut(s) 753
BpiI GAAGAC 1 cut(s) 858
Bpu14I TTCGAA 1 cut(s) 16
BpuMI CCSGG 1 cut(s) 476
BsaBI GATNNNNATC 1 cut(s) 752
BsaHI GRCGYC 2 cut(s) 393, 1336
BsaJI CCNNGG 2 cut(s) 457, 1359
BsaXI ACNNNNNCTCC 2 cut(s) 410, 440
Bsc4I CCNNNNNNNGG 3 cut(s) 39, 217, 1132
Bse118I RCCGGY 2 cut(s) 125, 1046
Bse1I ACTGG 6 cut(s) 370, 373, 748, 1020, 1299, 1331
Bse3DI GCAATG 1 cut(s) 756
Bse8I GATNNNNATC 1 cut(s) 752
BseBI CCWGG 1 cut(s) 398
BseDI CCNNGG 2 cut(s) 457, 1359
BseGI GGATG 1 cut(s) 29
BseJI GATNNNNATC 1 cut(s) 752
BseLI CCNNNNNNNGG 3 cut(s) 39, 217, 1132
BseMI GCAATG 1 cut(s) 756
BseMII CTCAG 2 cut(s) 29, 950
BseNI ACTGG 6 cut(s) 370, 373, 748, 1020, 1299, 1331
BseRI GAGGAG 2 cut(s) 671, 907
BseXI GCAGC 5 cut(s) 121, 208, 466, 833, 1030
Bsh1236I CGCG 3 cut(s) 335, 351, 770
Bsh1285I CGRYCG 1 cut(s) 8
BshFI GGCC 5 cut(s) 174, 401, 462, 694, 1125
BshNI GGYRCC 1 cut(s) 983
BsiEI CGRYCG 1 cut(s) 8
BsiHKCI CYCGRG 3 cut(s) 278, 523, 1358
BsiSI CCGG 5 cut(s) 126, 175, 476, 1047, 1274
BslFI GGGAC 4 cut(s) 67, 458, 1156, 1225
BslI CCNNNNNNNGG 3 cut(s) 39, 217, 1132
BsmAI GTCTC 2 cut(s) 161, 1271
BsmBI CGTCTC 1 cut(s) 161
BsmFI GGGAC 4 cut(s) 67, 458, 1156, 1225
BsnI GGCC 5 cut(s) 174, 401, 462, 694, 1125
BsoBI CYCGRG 3 cut(s) 278, 523, 1358
Bsp119I TTCGAA 1 cut(s) 16
Bsp143I GATC 3 cut(s) 258, 747, 880
BspACI CCGC 4 cut(s) 351, 402, 810, 875
BspANI GGCC 5 cut(s) 174, 401, 462, 694, 1125
BspCNI CTCAG 2 cut(s) 30, 949
BspFNI CGCG 3 cut(s) 335, 351, 770
BspHI TCATGA 1 cut(s) 1375
BspLI GGNNCC 5 cut(s) 55, 355, 660, 985, 1068
BspMI ACCTGC 1 cut(s) 727
BspPI GGATC 1 cut(s) 755
BspT104I TTCGAA 1 cut(s) 16
BspT107I GGYRCC 1 cut(s) 983
BsrBI CCGCTC 1 cut(s) 812
BsrDI GCAATG 1 cut(s) 756
BsrFI RCCGGY 2 cut(s) 125, 1046
BsrI ACTGG 6 cut(s) 370, 373, 748, 1020, 1299, 1331
BssAI RCCGGY 2 cut(s) 125, 1046
BssECI CCNNGG 2 cut(s) 457, 1359
BssMI GATC 3 cut(s) 258, 747, 880
BssNI GRCGYC 2 cut(s) 393, 1336
BssT1I CCWWGG 1 cut(s) 457
Bst2UI CCWGG 1 cut(s) 398
Bst4CI ACNGT 5 cut(s) 9, 233, 780, 1266, 1312
BstACI GRCGYC 2 cut(s) 393, 1336
BstBI TTCGAA 1 cut(s) 16
BstC8I GCNNGC 4 cut(s) 151, 446, 555, 612
BstDEI CTNAG 2 cut(s) 38, 936
BstEII GGTNACC 1 cut(s) 1287
BstF5I GGATG 1 cut(s) 29
BstFNI CGCG 3 cut(s) 335, 351, 770
BstH2I RGCGCY 1 cut(s) 617
BstHHI GCGC 4 cut(s) 337, 351, 616, 772
BstKTI GATC 3 cut(s) 261, 750, 883
BstMAI GTCTC 2 cut(s) 161, 1271
BstMBI GATC 3 cut(s) 258, 747, 880
BstMCI CGRYCG 1 cut(s) 8
BstMWI GCNNNNNNNGC 5 cut(s) 131, 563, 691, 767, 818
BstNI CCWGG 1 cut(s) 398
BstPI GGTNACC 1 cut(s) 1287
BstSCI CCNGG 2 cut(s) 396, 474
BstUI CGCG 3 cut(s) 335, 351, 770
BstV1I GCAGC 5 cut(s) 121, 208, 466, 833, 1030
BstV2I GAAGAC 1 cut(s) 858
BstXI CCANNNNNNTGG 1 cut(s) 345
BsuI GTATCC 1 cut(s) 929
BsuRI GGCC 5 cut(s) 174, 401, 462, 694, 1125
BtgZI GCGATG 1 cut(s) 123
BtsCI GGATG 1 cut(s) 29
BtsIMutI CAGTG 4 cut(s) 1262, 1292, 1317, 1324
BveI ACCTGC 1 cut(s) 727
Cac8I GCNNGC 4 cut(s) 151, 446, 555, 612
CaiI CAGNNNCTG 1 cut(s) 977
CciI TCATGA 1 cut(s) 1375
CfoI GCGC 4 cut(s) 337, 351, 616, 772
Cfr10I RCCGGY 2 cut(s) 125, 1046
Cfr13I GGNCC 3 cut(s) 54, 1018, 1067
CseI GACGC 2 cut(s) 382, 1325
Csp6I GTAC 4 cut(s) 688, 776, 975, 1085
CspCI CAANNNNNGTGG 2 cut(s) 1281, 1316
CviAII CATG 6 cut(s) 187, 253, 1062, 1132, 1246, 1376
CviQI GTAC 4 cut(s) 688, 776, 975, 1085
DdeI CTNAG 2 cut(s) 38, 936
DpnI GATC 3 cut(s) 260, 749, 882
DpnII GATC 3 cut(s) 258, 747, 880
DraI TTTAAA 1 cut(s) 228
EaeI YGGCCR 1 cut(s) 399
Eco130I CCWWGG 1 cut(s) 457
Eco147I AGGCCT 1 cut(s) 694
Eco47I GGWCC 3 cut(s) 54, 1018, 1067
Eco57I CTGAAG 1 cut(s) 1127
Eco88I CYCGRG 3 cut(s) 278, 523, 1358
Eco91I GGTNACC 1 cut(s) 1287
EcoO109I RGGNCCY 1 cut(s) 1067
EcoO65I GGTNACC 1 cut(s) 1287
EcoRII CCWGG 1 cut(s) 396
EcoT14I CCWWGG 1 cut(s) 457
ErhI CCWWGG 1 cut(s) 457
Esp3I CGTCTC 1 cut(s) 161
FaeI CATG 6 cut(s) 190, 256, 1065, 1135, 1249, 1379
FaqI GGGAC 4 cut(s) 67, 458, 1156, 1225
FatI CATG 6 cut(s) 186, 252, 1061, 1131, 1245, 1375
Fnu4HI GCNGC 6 cut(s) 135, 222, 402, 480, 822, 1044
FokI GGATG 1 cut(s) 16
Fsp4HI GCNGC 6 cut(s) 135, 222, 402, 480, 822, 1044
FspBI CTAG 4 cut(s) 170, 530, 959, 1022
GlaI GCGC 4 cut(s) 336, 350, 615, 771
GluI GCNGC 6 cut(s) 135, 222, 402, 480, 822, 1044
HaeII RGCGCY 1 cut(s) 617
HaeIII GGCC 5 cut(s) 174, 401, 462, 694, 1125
HapII CCGG 5 cut(s) 126, 175, 476, 1047, 1274
HgaI GACGC 2 cut(s) 382, 1325
HhaI GCGC 4 cut(s) 337, 351, 616, 772
Hin1I GRCGYC 2 cut(s) 393, 1336
Hin1II CATG 6 cut(s) 190, 256, 1065, 1135, 1249, 1379
Hin6I GCGC 4 cut(s) 335, 349, 614, 770
HinP1I GCGC 4 cut(s) 335, 349, 614, 770
HinfI GANTC 7 cut(s) 47, 166, 387, 515, 806, 856, 1111
HpaII CCGG 5 cut(s) 126, 175, 476, 1047, 1274
HphI GGTGA 2 cut(s) 151, 751
Hpy166II GTNNAC 1 cut(s) 1355
Hpy188I TCNGA 6 cut(s) 328, 386, 514, 681, 836, 1350
Hpy188III TCNNGA 1 cut(s) 1376
Hpy8I GTNNAC 1 cut(s) 1355
Hpy99I CGWCG 1 cut(s) 1341
HpyAV CCTTC 4 cut(s) 23, 37, 367, 1189
HpyCH4III ACNGT 5 cut(s) 9, 233, 780, 1266, 1312
HpyCH4V TGCA 7 cut(s) 137, 411, 821, 910, 1154, 1262, 1306
HpyF10VI GCNNNNNNNGC 5 cut(s) 131, 563, 691, 767, 818
HpyF3I CTNAG 2 cut(s) 38, 936
Hsp92I GRCGYC 2 cut(s) 393, 1336
Hsp92II CATG 6 cut(s) 190, 256, 1065, 1135, 1249, 1379
HspAI GCGC 4 cut(s) 335, 349, 614, 770
Kzo9I GATC 3 cut(s) 258, 747, 880
LmnI GCTCC 4 cut(s) 236, 316, 353, 658
Lsp1109I GCAGC 5 cut(s) 121, 208, 466, 833, 1030
LweI GCATC 1 cut(s) 146
MaeI CTAG 4 cut(s) 170, 530, 959, 1022
MaeIII GTNAC 2 cut(s) 739, 1287
MalI GATC 3 cut(s) 260, 749, 882
MbiI CCGCTC 1 cut(s) 812
MboI GATC 3 cut(s) 258, 747, 880
MboII GAAGA 3 cut(s) 370, 858, 1120
MluCI AATT 3 cut(s) 20, 636, 816
MlyI GAGTC 1 cut(s) 509
MmeI TCCRAC 1 cut(s) 1214
MroXI GAANNNNTTC 1 cut(s) 805
MseI TTAA 6 cut(s) 95, 227, 243, 624, 843, 1371
MslI CAYNNNNRTG 2 cut(s) 343, 1163
MspI CCGG 5 cut(s) 126, 175, 476, 1047, 1274
MspR9I CCNGG 2 cut(s) 398, 476
MvaI CCWGG 1 cut(s) 398
MvnI CGCG 3 cut(s) 335, 351, 770
MwoI GCNNNNNNNGC 5 cut(s) 131, 563, 691, 767, 818
NciI CCSGG 1 cut(s) 476
NdeII GATC 3 cut(s) 258, 747, 880
NlaIII CATG 6 cut(s) 190, 256, 1065, 1135, 1249, 1379
NlaIV GGNNCC 5 cut(s) 55, 355, 660, 985, 1068
NmuCI GTSAC 1 cut(s) 739
NspV TTCGAA 1 cut(s) 16
OliI CACNNNNGTG 1 cut(s) 1163
PaeR7I CTCGAG 1 cut(s) 523
PagI TCATGA 1 cut(s) 1375
PaqCI CACCTGC 1 cut(s) 727
PceI AGGCCT 1 cut(s) 694
PcsI WCGNNNNNNNCGW 2 cut(s) 146, 390
PdmI GAANNNNTTC 1 cut(s) 805
PfeI GAWTC 6 cut(s) 47, 166, 387, 806, 856, 1111
PflMI CCANNNNNTGG 1 cut(s) 1132
PkrI GCNGC 6 cut(s) 136, 223, 403, 481, 823, 1045
PleI GAGTC 1 cut(s) 509
PpsI GAGTC 1 cut(s) 509
PpuMI RGGWCCY 1 cut(s) 1067
PshBI ATTAAT 1 cut(s) 1371
Psp5II RGGWCCY 1 cut(s) 1067
Psp6I CCWGG 1 cut(s) 396
PspEI GGTNACC 1 cut(s) 1287
PspGI CCWGG 1 cut(s) 396
PspN4I GGNNCC 5 cut(s) 55, 355, 660, 985, 1068
PspPI GGNCC 3 cut(s) 54, 1018, 1067
PspPPI RGGWCCY 1 cut(s) 1067
PspXI VCTCGAGB 1 cut(s) 523
PstNI CAGNNNCTG 1 cut(s) 977
RsaI GTAC 4 cut(s) 689, 777, 976, 1086
RsaNI GTAC 4 cut(s) 688, 776, 975, 1085
RseI CAYNNNNRTG 2 cut(s) 343, 1163
SaqAI TTAA 6 cut(s) 95, 227, 243, 624, 843, 1371
SatI GCNGC 6 cut(s) 135, 222, 402, 480, 822, 1044
Sau3AI GATC 3 cut(s) 258, 747, 880
Sau96I GGNCC 3 cut(s) 54, 1018, 1067
SchI GAGTC 1 cut(s) 509
ScrFI CCNGG 2 cut(s) 398, 476
SfaNI GCATC 1 cut(s) 146
Sfr274I CTCGAG 1 cut(s) 523
SfuI TTCGAA 1 cut(s) 16
SinI GGWCC 3 cut(s) 54, 1018, 1067
SlaI CTCGAG 1 cut(s) 523
SmiMI CAYNNNNRTG 2 cut(s) 343, 1163
SmlI CTYRAG 1 cut(s) 523
SmoI CTYRAG 1 cut(s) 523
Sse9I AATT 3 cut(s) 20, 636, 816
SseBI AGGCCT 1 cut(s) 694
SsiI CCGC 4 cut(s) 351, 402, 810, 875
SspI AATATT 3 cut(s) 247, 847, 1382
SspMI CTAG 4 cut(s) 170, 530, 959, 1022
StuI AGGCCT 1 cut(s) 694
StyD4I CCNGG 2 cut(s) 396, 474
StyI CCWWGG 1 cut(s) 457
TaaI ACNGT 5 cut(s) 9, 233, 780, 1266, 1312
TaqI TCGA 7 cut(s) 16, 524, 534, 549, 600, 854, 1114
TasI AATT 3 cut(s) 20, 636, 816
TatI WGTACW 2 cut(s) 687, 775
TauI GCSGC 1 cut(s) 404
TfiI GAWTC 6 cut(s) 47, 166, 387, 806, 856, 1111
Tru1I TTAA 6 cut(s) 95, 227, 243, 624, 843, 1371
Tru9I TTAA 6 cut(s) 95, 227, 243, 624, 843, 1371
TscAI CASTG 4 cut(s) 1269, 1299, 1317, 1331
TseFI GTSAC 1 cut(s) 739
TseI GCWGC 5 cut(s) 134, 221, 479, 821, 1043
Tsp45I GTSAC 1 cut(s) 739
TspDTI ATGAA 4 cut(s) 370, 496, 919, 1160
TspGWI ACGGA 1 cut(s) 714
TspRI CASTG 4 cut(s) 1269, 1299, 1317, 1331
Van91I CCANNNNNTGG 1 cut(s) 1132
VpaK11BI GGWCC 3 cut(s) 54, 1018, 1067
VspI ATTAAT 1 cut(s) 1371
XapI RAATTY 1 cut(s) 20
XcmI CCANNNNNNNNNTGG 2 cut(s) 259, 1205
XhoI CTCGAG 1 cut(s) 523
XmnI GAANNNNTTC 1 cut(s) 805
XspI CTAG 4 cut(s) 170, 530, 959, 1022
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.