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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g24061 FvH4_4g24260 FvH4_6g02711 |
| rosa_chinensis | RchiOBHm_Chr4g0430791 |
| rosa_laevigata | RLG00000006950 |
| rosa_multiflora | Rmu_co8370567.1_g000001 Rmu_sc0002620.1_g000016 Rmu_sc0020793.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00372480 |
| rosa_rugosa | Rorug04G0245700 |
| rosa_samantha | Rh4AG301800 Rh4BG309900 |
| rosa_wichuraiana | Rw4G026230 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 314 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 191 |
| AccI | GTMKAC | 1 cut(s) | 252 |
| AcuI | CTGAAG | 1 cut(s) | 288 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 191, 194 |
| AflII | CTTAAG | 1 cut(s) | 92 |
| AluBI | AGCT | 3 cut(s) | 20, 59, 223 |
| AluI | AGCT | 3 cut(s) | 20, 59, 223 |
| Alw26I | GTCTC | 1 cut(s) | 9 |
| AspLEI | GCGC | 1 cut(s) | 160 |
| AspS9I | GGNCC | 1 cut(s) | 88 |
| AvaII | GGWCC | 1 cut(s) | 88 |
| BbsI | GAAGAC | 2 cut(s) | 72, 269 |
| BccI | CCATC | 4 cut(s) | 142, 242, 263, 326 |
| BclI | TGATCA | 1 cut(s) | 289 |
| BcoDI | GTCTC | 1 cut(s) | 9 |
| BfmI | CTRYAG | 1 cut(s) | 108 |
| BfrI | CTTAAG | 1 cut(s) | 92 |
| Bme18I | GGWCC | 1 cut(s) | 88 |
| BmgT120I | GGNCC | 1 cut(s) | 88 |
| BmiI | GGNNCC | 1 cut(s) | 89 |
| BmsI | GCATC | 1 cut(s) | 145 |
| BpiI | GAAGAC | 2 cut(s) | 72, 269 |
| Bsa29I | ATCGAT | 1 cut(s) | 137 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 191, 194 |
| BseCI | ATCGAT | 1 cut(s) | 137 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 191, 194 |
| BseMII | CTCAG | 1 cut(s) | 233 |
| BseRI | GAGGAG | 2 cut(s) | 184, 187 |
| BshVI | ATCGAT | 1 cut(s) | 137 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 191, 194 |
| BsmAI | GTCTC | 1 cut(s) | 9 |
| Bsp143I | GATC | 3 cut(s) | 138, 148, 289 |
| BspCNI | CTCAG | 1 cut(s) | 232 |
| BspDI | ATCGAT | 1 cut(s) | 137 |
| BspLI | GGNNCC | 1 cut(s) | 89 |
| BspTI | CTTAAG | 1 cut(s) | 92 |
| BssMI | GATC | 3 cut(s) | 138, 148, 289 |
| Bst4CI | ACNGT | 1 cut(s) | 112 |
| BstAFI | CTTAAG | 1 cut(s) | 92 |
| BstDEI | CTNAG | 1 cut(s) | 219 |
| BstHHI | GCGC | 1 cut(s) | 160 |
| BstKTI | GATC | 3 cut(s) | 141, 151, 292 |
| BstMAI | GTCTC | 1 cut(s) | 9 |
| BstMBI | GATC | 3 cut(s) | 138, 148, 289 |
| BstSFI | CTRYAG | 1 cut(s) | 108 |
| BstV2I | GAAGAC | 2 cut(s) | 72, 269 |
| Bsu15I | ATCGAT | 1 cut(s) | 137 |
| BsuTUI | ATCGAT | 1 cut(s) | 137 |
| BtsIMutI | CAGTG | 2 cut(s) | 126, 292 |
| CfoI | GCGC | 1 cut(s) | 160 |
| Cfr13I | GGNCC | 1 cut(s) | 88 |
| ClaI | ATCGAT | 1 cut(s) | 137 |
| CviAII | CATG | 1 cut(s) | 84 |
| CviJI | RGCY | 3 cut(s) | 20, 59, 223 |
| CviKI_1 | RGCY | 3 cut(s) | 20, 59, 223 |
| DdeI | CTNAG | 1 cut(s) | 219 |
| DpnI | GATC | 3 cut(s) | 140, 150, 291 |
| DpnII | GATC | 3 cut(s) | 138, 148, 289 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 314 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 314 |
| Eco47I | GGWCC | 1 cut(s) | 88 |
| Eco57I | CTGAAG | 1 cut(s) | 288 |
| EcoO109I | RGGNCCY | 1 cut(s) | 88 |
| FaeI | CATG | 1 cut(s) | 87 |
| FaiI | YATR | 5 cut(s) | 17, 24, 71, 85, 192 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 172, 204 |
| FatI | CATG | 1 cut(s) | 83 |
| FbaI | TGATCA | 1 cut(s) | 289 |
| FblI | GTMKAC | 1 cut(s) | 252 |
| GlaI | GCGC | 1 cut(s) | 159 |
| HhaI | GCGC | 1 cut(s) | 160 |
| Hin1II | CATG | 1 cut(s) | 87 |
| Hin6I | GCGC | 1 cut(s) | 158 |
| HinP1I | GCGC | 1 cut(s) | 158 |
| HincII | GTYRAC | 2 cut(s) | 214, 253 |
| HindII | GTYRAC | 2 cut(s) | 214, 253 |
| HinfI | GANTC | 1 cut(s) | 282 |
| HpaI | GTTAAC | 1 cut(s) | 214 |
| Hpy166II | GTNNAC | 2 cut(s) | 214, 253 |
| Hpy188I | TCNGA | 2 cut(s) | 239, 307 |
| Hpy188III | TCNNGA | 2 cut(s) | 152, 180 |
| Hpy8I | GTNNAC | 2 cut(s) | 214, 253 |
| HpyAV | CCTTC | 2 cut(s) | 52, 312 |
| HpyCH4III | ACNGT | 1 cut(s) | 112 |
| HpyCH4IV | ACGT | 2 cut(s) | 12, 98 |
| HpyCH4V | TGCA | 1 cut(s) | 126 |
| HpyF3I | CTNAG | 1 cut(s) | 219 |
| HpySE526I | ACGT | 2 cut(s) | 12, 98 |
| Hsp92II | CATG | 1 cut(s) | 87 |
| HspAI | GCGC | 1 cut(s) | 158 |
| Ksp22I | TGATCA | 1 cut(s) | 289 |
| KspAI | GTTAAC | 1 cut(s) | 214 |
| Kzo9I | GATC | 3 cut(s) | 138, 148, 289 |
| LmnI | GCTCC | 1 cut(s) | 64 |
| LpnPI | CCDG | 1 cut(s) | 270 |
| LweI | GCATC | 1 cut(s) | 145 |
| MaeII | ACGT | 2 cut(s) | 12, 98 |
| MaeIII | GTNAC | 1 cut(s) | 28 |
| MalI | GATC | 3 cut(s) | 140, 150, 291 |
| MboI | GATC | 3 cut(s) | 138, 148, 289 |
| MboII | GAAGA | 3 cut(s) | 72, 269, 323 |
| MluCI | AATT | 1 cut(s) | 49 |
| MmeI | TCCRAC | 1 cut(s) | 86 |
| MnlI | CCTC | 3 cut(s) | 162, 165, 168 |
| MseI | TTAA | 3 cut(s) | 9, 93, 213 |
| MspCI | CTTAAG | 1 cut(s) | 92 |
| NdeII | GATC | 3 cut(s) | 138, 148, 289 |
| NlaIII | CATG | 1 cut(s) | 87 |
| NlaIV | GGNNCC | 1 cut(s) | 89 |
| PfeI | GAWTC | 1 cut(s) | 282 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 191 |
| PpuMI | RGGWCCY | 1 cut(s) | 88 |
| Psp5II | RGGWCCY | 1 cut(s) | 88 |
| PspN4I | GGNNCC | 1 cut(s) | 89 |
| PspPI | GGNCC | 1 cut(s) | 88 |
| PspPPI | RGGWCCY | 1 cut(s) | 88 |
| SalI | GTCGAC | 1 cut(s) | 251 |
| SaqAI | TTAA | 3 cut(s) | 9, 93, 213 |
| Sau3AI | GATC | 3 cut(s) | 138, 148, 289 |
| Sau96I | GGNCC | 1 cut(s) | 88 |
| SetI | ASST | 8 cut(s) | 15, 22, 61, 101, 179, 190, 209, 225 |
| SfaNI | GCATC | 1 cut(s) | 145 |
| SfcI | CTRYAG | 1 cut(s) | 108 |
| SgeI | CNNG | 8 cut(s) | 96, 127, 135, 164, 192, 269, 275, 335 |
| SinI | GGWCC | 1 cut(s) | 88 |
| SmlI | CTYRAG | 1 cut(s) | 92 |
| SmoI | CTYRAG | 1 cut(s) | 92 |
| Sse9I | AATT | 1 cut(s) | 49 |
| TaaI | ACNGT | 1 cut(s) | 112 |
| TaiI | ACGT | 2 cut(s) | 15, 101 |
| TaqI | TCGA | 5 cut(s) | 114, 137, 153, 252, 280 |
| TasI | AATT | 1 cut(s) | 49 |
| TfiI | GAWTC | 1 cut(s) | 282 |
| Tru1I | TTAA | 3 cut(s) | 9, 93, 213 |
| Tru9I | TTAA | 3 cut(s) | 9, 93, 213 |
| TscAI | CASTG | 2 cut(s) | 133, 292 |
| TspDTI | ATGAA | 2 cut(s) | 72, 260 |
| TspRI | CASTG | 2 cut(s) | 133, 292 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 191 |
| Vha464I | CTTAAG | 1 cut(s) | 92 |
| VpaK11BI | GGWCC | 1 cut(s) | 88 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 329 |
| XmiI | GTMKAC | 1 cut(s) | 252 |