Frigida-like protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g04511 FvH4_6g04590 FvH4_6g04630 |
| rosa_chinensis | RchiOBHm_Chr3g0453101 |
| rosa_laevigata | RLG00000025537 |
| rosa_multiflora | Rmu_sc0009015.1_g000009 |
| rosa_roxburghii | Rroxscaffold_6G00430170 |
| rosa_rugosa | Rorug02G0646500 Rorug02G0646600 |
| rosa_samantha | Rh3AG049100 Rh3BG050300 Rh3CG050400 Rh3DG051100 |
| rosa_wichuraiana | Rw3G003760 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2105 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 2078 |
| Acc65I | GGTACC | 1 cut(s) | 1558 |
| AccB1I | GGYRCC | 2 cut(s) | 212, 1558 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 418 |
| AccII | CGCG | 2 cut(s) | 142, 192 |
| AccIII | TCCGGA | 1 cut(s) | 168 |
| AciI | CCGC | 9 cut(s) | 49, 118, 142, 190, 245, 464, 784, 815, 1337 |
| AcsI | RAATTY | 5 cut(s) | 423, 1433, 1547, 1608, 1946 |
| AcuI | CTGAAG | 2 cut(s) | 323, 788 |
| AcyI | GRCGYC | 1 cut(s) | 213 |
| AfaI | GTAC | 6 cut(s) | 74, 287, 765, 1091, 1560, 1932 |
| AfeI | AGCGCT | 1 cut(s) | 258 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 91, 127, 168, 195, 196, 202, 418 |
| AflIII | ACRYGT | 1 cut(s) | 322 |
| AjnI | CCWGG | 4 cut(s) | 135, 291, 1554, 1782 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 668, 700 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2194, 2226 |
| Alw21I | GWGCWC | 2 cut(s) | 135, 1681 |
| Alw26I | GTCTC | 3 cut(s) | 152, 1859, 2163 |
| Aor13HI | TCCGGA | 1 cut(s) | 168 |
| Aor51HI | AGCGCT | 1 cut(s) | 258 |
| AoxI | GGCC | 4 cut(s) | 408, 1188, 1705, 2153 |
| ApeKI | GCWGC | 5 cut(s) | 46, 95, 268, 1498, 2248 |
| ApoI | RAATTY | 5 cut(s) | 423, 1433, 1547, 1608, 1946 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1029 |
| Asp718I | GGTACC | 1 cut(s) | 1558 |
| AspLEI | GCGC | 3 cut(s) | 142, 215, 259 |
| AspS9I | GGNCC | 2 cut(s) | 150, 409 |
| AsuC2I | CCSGG | 1 cut(s) | 197 |
| AsuHPI | GGTGA | 2 cut(s) | 361, 367 |
| AsuII | TTCGAA | 1 cut(s) | 1248 |
| AvaII | GGWCC | 1 cut(s) | 150 |
| BanI | GGYRCC | 2 cut(s) | 212, 1558 |
| BanII | GRGCYC | 2 cut(s) | 135, 1681 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 65, 97 |
| BbsI | GAAGAC | 2 cut(s) | 1241, 2076 |
| Bbv12I | GWGCWC | 2 cut(s) | 135, 1681 |
| BbvI | GCAGC | 5 cut(s) | 58, 82, 280, 1510, 2235 |
| BccI | CCATC | 6 cut(s) | 244, 469, 580, 907, 1324, 1735 |
| BceAI | ACGGC | 3 cut(s) | 292, 1720, 2140 |
| BciT130I | CCWGG | 4 cut(s) | 137, 293, 1556, 1784 |
| BclI | TGATCA | 2 cut(s) | 613, 1503 |
| BcnI | CCSGG | 1 cut(s) | 197 |
| BcoDI | GTCTC | 3 cut(s) | 152, 1859, 2163 |
| BfaI | CTAG | 3 cut(s) | 279, 968, 2090 |
| BfoI | RGCGCY | 2 cut(s) | 216, 260 |
| BglII | AGATCT | 1 cut(s) | 2119 |
| BisI | GCNGC | 7 cut(s) | 47, 50, 96, 269, 465, 1499, 2249 |
| BlsI | GCNGC | 7 cut(s) | 48, 51, 97, 270, 466, 1500, 2250 |
| Bme1390I | CCNGG | 5 cut(s) | 137, 197, 293, 1556, 1784 |
| Bme18I | GGWCC | 1 cut(s) | 150 |
| BmgT120I | GGNCC | 2 cut(s) | 150, 409 |
| BmiI | GGNNCC | 6 cut(s) | 151, 179, 214, 1560, 1985, 2141 |
| BmrFI | CCNGG | 5 cut(s) | 137, 197, 293, 1556, 1784 |
| BmrI | ACTGGG | 1 cut(s) | 1922 |
| BmsI | GCATC | 4 cut(s) | 613, 802, 1576, 1948 |
| BmuI | ACTGGG | 1 cut(s) | 1922 |
| BpiI | GAAGAC | 2 cut(s) | 1241, 2076 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2143, 2175 |
| BpmI | CTGGAG | 2 cut(s) | 119, 281 |
| Bpu14I | TTCGAA | 1 cut(s) | 1248 |
| BpuEI | CTTGAG | 4 cut(s) | 968, 1178, 1730, 2144 |
| BpuMI | CCSGG | 1 cut(s) | 197 |
| Bsa29I | ATCGAT | 1 cut(s) | 1112 |
| BsaHI | GRCGYC | 1 cut(s) | 213 |
| BsaI | GGTCTC | 1 cut(s) | 152 |
| BsaJI | CCNNGG | 1 cut(s) | 1554 |
| BsaWI | WCCGGW | 1 cut(s) | 168 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 650, 680, 791, 821, 920, 950 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 91, 127, 168, 195, 196, 202, 418 |
| Bse1I | ACTGG | 3 cut(s) | 121, 1471, 1928 |
| Bse3DI | GCAATG | 2 cut(s) | 878, 1981 |
| BseAI | TCCGGA | 1 cut(s) | 168 |
| BseBI | CCWGG | 4 cut(s) | 137, 293, 1556, 1784 |
| BseCI | ATCGAT | 1 cut(s) | 1112 |
| BseDI | CCNNGG | 1 cut(s) | 1554 |
| BseGI | GGATG | 3 cut(s) | 1060, 1591, 1963 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 91, 127, 168, 195, 196, 202, 418 |
| BseMI | GCAATG | 2 cut(s) | 878, 1981 |
| BseMII | CTCAG | 3 cut(s) | 473, 1253, 1430 |
| BseNI | ACTGG | 3 cut(s) | 121, 1471, 1928 |
| BseRI | GAGGAG | 7 cut(s) | 20, 70, 344, 554, 748, 944, 1199 |
| BseXI | GCAGC | 5 cut(s) | 58, 82, 280, 1510, 2235 |
| BsgI | GTGCAG | 1 cut(s) | 1882 |
| Bsh1236I | CGCG | 2 cut(s) | 142, 192 |
| Bsh1285I | CGRYCG | 1 cut(s) | 196 |
| BshFI | GGCC | 4 cut(s) | 410, 1190, 1707, 2155 |
| BshNI | GGYRCC | 2 cut(s) | 212, 1558 |
| BshVI | ATCGAT | 1 cut(s) | 1112 |
| BsiEI | CGRYCG | 1 cut(s) | 196 |
| BsiHKAI | GWGCWC | 2 cut(s) | 135, 1681 |
| BsiSI | CCGG | 3 cut(s) | 20, 169, 196 |
| BslFI | GGGAC | 2 cut(s) | 1132, 2066 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 91, 127, 168, 195, 196, 202, 418 |
| BsmAI | GTCTC | 3 cut(s) | 152, 1859, 2163 |
| BsmBI | CGTCTC | 1 cut(s) | 2163 |
| BsmFI | GGGAC | 2 cut(s) | 1132, 2066 |
| BsmI | GAATGC | 3 cut(s) | 1064, 1318, 2093 |
| BsnI | GGCC | 4 cut(s) | 410, 1190, 1707, 2155 |
| Bso31I | GGTCTC | 1 cut(s) | 152 |
| Bsp119I | TTCGAA | 1 cut(s) | 1248 |
| Bsp1286I | GDGCHC | 2 cut(s) | 135, 1681 |
| Bsp13I | TCCGGA | 1 cut(s) | 168 |
| Bsp143I | GATC | 8 cut(s) | 613, 1153, 1300, 1503, 1669, 1699, 2041, 2119 |
| BspACI | CCGC | 9 cut(s) | 49, 118, 142, 190, 245, 464, 784, 815, 1337 |
| BspANI | GGCC | 4 cut(s) | 410, 1190, 1707, 2155 |
| BspCNI | CTCAG | 3 cut(s) | 474, 1252, 1429 |
| BspDI | ATCGAT | 1 cut(s) | 1112 |
| BspEI | TCCGGA | 1 cut(s) | 168 |
| BspFNI | CGCG | 2 cut(s) | 142, 192 |
| BspLI | GGNNCC | 6 cut(s) | 151, 179, 214, 1560, 1985, 2141 |
| BspT104I | TTCGAA | 1 cut(s) | 1248 |
| BspT107I | GGYRCC | 2 cut(s) | 212, 1558 |
| BspTNI | GGTCTC | 1 cut(s) | 152 |
| BsrDI | GCAATG | 2 cut(s) | 878, 1981 |
| BsrI | ACTGG | 3 cut(s) | 121, 1471, 1928 |
| BssECI | CCNNGG | 1 cut(s) | 1554 |
| BssMI | GATC | 8 cut(s) | 613, 1153, 1300, 1503, 1669, 1699, 2041, 2119 |
| BssNI | GRCGYC | 1 cut(s) | 213 |
| Bst2UI | CCWGG | 4 cut(s) | 137, 293, 1556, 1784 |
| Bst4CI | ACNGT | 3 cut(s) | 177, 1800, 2173 |
| Bst6I | CTCTTC | 9 cut(s) | 228, 366, 531, 590, 1020, 1176, 1423, 1638, 2004 |
| BstACI | GRCGYC | 1 cut(s) | 213 |
| BstBI | TTCGAA | 1 cut(s) | 1248 |
| BstC8I | GCNNGC | 3 cut(s) | 93, 190, 1496 |
| BstDEI | CTNAG | 5 cut(s) | 482, 1239, 1416, 1673, 2045 |
| BstF5I | GGATG | 3 cut(s) | 1060, 1591, 1963 |
| BstFNI | CGCG | 2 cut(s) | 142, 192 |
| BstH2I | RGCGCY | 2 cut(s) | 216, 260 |
| BstHHI | GCGC | 3 cut(s) | 142, 215, 259 |
| BstKTI | GATC | 8 cut(s) | 616, 1156, 1303, 1506, 1672, 1702, 2044, 2122 |
| BstMAI | GTCTC | 3 cut(s) | 152, 1859, 2163 |
| BstMBI | GATC | 8 cut(s) | 613, 1153, 1300, 1503, 1669, 1699, 2041, 2119 |
| BstMCI | CGRYCG | 1 cut(s) | 196 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 109, 139, 265 |
| BstNI | CCWGG | 4 cut(s) | 137, 293, 1556, 1784 |
| BstNSI | RCATGY | 1 cut(s) | 326 |
| BstSCI | CCNGG | 5 cut(s) | 135, 195, 291, 1554, 1782 |
| BstUI | CGCG | 2 cut(s) | 142, 192 |
| BstV1I | GCAGC | 5 cut(s) | 58, 82, 280, 1510, 2235 |
| BstV2I | GAAGAC | 2 cut(s) | 1241, 2076 |
| BstX2I | RGATCY | 1 cut(s) | 2119 |
| BstYI | RGATCY | 1 cut(s) | 2119 |
| Bsu15I | ATCGAT | 1 cut(s) | 1112 |
| BsuRI | GGCC | 4 cut(s) | 410, 1190, 1707, 2155 |
| BsuTUI | ATCGAT | 1 cut(s) | 1112 |
| BtgZI | GCGATG | 2 cut(s) | 599, 641 |
| BtsCI | GGATG | 3 cut(s) | 1060, 1591, 1963 |
| BtsIMutI | CAGTG | 4 cut(s) | 1149, 1602, 1694, 2169 |
| Cac8I | GCNNGC | 3 cut(s) | 93, 190, 1496 |
| CfoI | GCGC | 3 cut(s) | 142, 215, 259 |
| Cfr13I | GGNCC | 2 cut(s) | 150, 409 |
| ClaI | ATCGAT | 1 cut(s) | 1112 |
| CseI | GACGC | 1 cut(s) | 2068 |
| CsiI | ACCWGGT | 1 cut(s) | 1782 |
| Csp6I | GTAC | 6 cut(s) | 73, 286, 764, 1090, 1559, 1931 |
| CviAII | CATG | 5 cut(s) | 323, 1151, 1364, 1631, 1817 |
| CviQI | GTAC | 6 cut(s) | 73, 286, 764, 1090, 1559, 1931 |
| DdeI | CTNAG | 5 cut(s) | 482, 1239, 1416, 1673, 2045 |
| DinI | GGCGCC | 1 cut(s) | 214 |
| DpnI | GATC | 8 cut(s) | 615, 1155, 1302, 1505, 1671, 1701, 2043, 2121 |
| DpnII | GATC | 8 cut(s) | 613, 1153, 1300, 1503, 1669, 1699, 2041, 2119 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2078 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2078 |
| Eam1104I | CTCTTC | 9 cut(s) | 228, 366, 531, 590, 1020, 1176, 1423, 1638, 2004 |
| EarI | CTCTTC | 9 cut(s) | 228, 366, 531, 590, 1020, 1176, 1423, 1638, 2004 |
| EciI | GGCGGA | 2 cut(s) | 260, 799 |
| Ecl136II | GAGCTC | 2 cut(s) | 133, 1679 |
| Eco24I | GRGCYC | 2 cut(s) | 135, 1681 |
| Eco31I | GGTCTC | 1 cut(s) | 152 |
| Eco47I | GGWCC | 1 cut(s) | 150 |
| Eco47III | AGCGCT | 1 cut(s) | 258 |
| Eco53kI | GAGCTC | 2 cut(s) | 133, 1679 |
| Eco57I | CTGAAG | 2 cut(s) | 323, 788 |
| EcoICRI | GAGCTC | 2 cut(s) | 133, 1679 |
| EcoRII | CCWGG | 4 cut(s) | 135, 291, 1554, 1782 |
| EcoT22I | ATGCAT | 1 cut(s) | 2066 |
| EcoT38I | GRGCYC | 2 cut(s) | 135, 1681 |
| EgeI | GGCGCC | 1 cut(s) | 214 |
| EheI | GGCGCC | 1 cut(s) | 214 |
| Esp3I | CGTCTC | 1 cut(s) | 2163 |
| FaeI | CATG | 5 cut(s) | 326, 1154, 1367, 1634, 1820 |
| FaqI | GGGAC | 2 cut(s) | 1132, 2066 |
| FatI | CATG | 5 cut(s) | 322, 1150, 1363, 1630, 1816 |
| FauI | CCCGC | 2 cut(s) | 125, 197 |
| FbaI | TGATCA | 2 cut(s) | 613, 1503 |
| Fnu4HI | GCNGC | 7 cut(s) | 47, 50, 96, 269, 465, 1499, 2249 |
| FokI | GGATG | 3 cut(s) | 1067, 1598, 1970 |
| FriOI | GRGCYC | 2 cut(s) | 135, 1681 |
| Fsp4HI | GCNGC | 7 cut(s) | 47, 50, 96, 269, 465, 1499, 2249 |
| FspBI | CTAG | 3 cut(s) | 279, 968, 2090 |
| GlaI | GCGC | 3 cut(s) | 141, 214, 258 |
| GluI | GCNGC | 7 cut(s) | 47, 50, 96, 269, 465, 1499, 2249 |
| GsuI | CTGGAG | 2 cut(s) | 119, 281 |
| HaeII | RGCGCY | 2 cut(s) | 216, 260 |
| HaeIII | GGCC | 4 cut(s) | 410, 1190, 1707, 2155 |
| HapII | CCGG | 3 cut(s) | 20, 169, 196 |
| HgaI | GACGC | 1 cut(s) | 2068 |
| HhaI | GCGC | 3 cut(s) | 142, 215, 259 |
| Hin1I | GRCGYC | 1 cut(s) | 213 |
| Hin1II | CATG | 5 cut(s) | 326, 1154, 1367, 1634, 1820 |
| Hin6I | GCGC | 3 cut(s) | 140, 213, 257 |
| HinP1I | GCGC | 3 cut(s) | 140, 213, 257 |
| HindIII | AAGCTT | 2 cut(s) | 944, 1346 |
| HpaII | CCGG | 3 cut(s) | 20, 169, 196 |
| HphI | GGTGA | 2 cut(s) | 361, 367 |
| Hpy166II | GTNNAC | 3 cut(s) | 75, 153, 2026 |
| Hpy188I | TCNGA | 9 cut(s) | 37, 303, 694, 1354, 1479, 1683, 1851, 2058, 2163 |
| Hpy188III | TCNNGA | 7 cut(s) | 169, 833, 1157, 1567, 1939, 2117, 2123 |
| Hpy8I | GTNNAC | 3 cut(s) | 75, 153, 2026 |
| Hpy99I | CGWCG | 2 cut(s) | 28, 110 |
| HpyCH4III | ACNGT | 3 cut(s) | 177, 1800, 2173 |
| HpyCH4IV | ACGT | 1 cut(s) | 1517 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 109, 139, 265 |
| HpyF3I | CTNAG | 5 cut(s) | 482, 1239, 1416, 1673, 2045 |
| HpySE526I | ACGT | 1 cut(s) | 1517 |
| Hsp92I | GRCGYC | 1 cut(s) | 213 |
| Hsp92II | CATG | 5 cut(s) | 326, 1154, 1367, 1634, 1820 |
| HspAI | GCGC | 3 cut(s) | 140, 213, 257 |
| KasI | GGCGCC | 1 cut(s) | 212 |
| Kpn2I | TCCGGA | 1 cut(s) | 168 |
| KpnI | GGTACC | 1 cut(s) | 1562 |
| Ksp22I | TGATCA | 2 cut(s) | 613, 1503 |
| Kzo9I | GATC | 8 cut(s) | 613, 1153, 1300, 1503, 1669, 1699, 2041, 2119 |
| Lsp1109I | GCAGC | 5 cut(s) | 58, 82, 280, 1510, 2235 |
| LweI | GCATC | 4 cut(s) | 613, 802, 1576, 1948 |
| MabI | ACCWGGT | 1 cut(s) | 1782 |
| MaeI | CTAG | 3 cut(s) | 279, 968, 2090 |
| MaeII | ACGT | 1 cut(s) | 1517 |
| MaeIII | GTNAC | 1 cut(s) | 1513 |
| MalI | GATC | 8 cut(s) | 615, 1155, 1302, 1505, 1671, 1701, 2043, 2121 |
| MboI | GATC | 8 cut(s) | 613, 1153, 1300, 1503, 1669, 1699, 2041, 2119 |
| MfeI | CAATTG | 1 cut(s) | 1728 |
| MflI | RGATCY | 1 cut(s) | 2119 |
| MhlI | GDGCHC | 2 cut(s) | 135, 1681 |
| Mly113I | GGCGCC | 1 cut(s) | 213 |
| MlyI | GAGTC | 7 cut(s) | 26, 413, 698, 1231, 1451, 1721, 1861 |
| Mph1103I | ATGCAT | 1 cut(s) | 2066 |
| MroI | TCCGGA | 1 cut(s) | 168 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1029 |
| MseI | TTAA | 7 cut(s) | 318, 794, 1064, 1080, 1278, 1463, 1766 |
| MspA1I | CMGCKG | 5 cut(s) | 49, 271, 1243, 1501, 2248 |
| MspI | CCGG | 3 cut(s) | 20, 169, 196 |
| MspR9I | CCNGG | 5 cut(s) | 137, 197, 293, 1556, 1784 |
| MunI | CAATTG | 1 cut(s) | 1728 |
| Mva1269I | GAATGC | 3 cut(s) | 1064, 1318, 2093 |
| MvaI | CCWGG | 4 cut(s) | 137, 293, 1556, 1784 |
| MvnI | CGCG | 2 cut(s) | 142, 192 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 109, 139, 265 |
| NarI | GGCGCC | 1 cut(s) | 213 |
| NciI | CCSGG | 1 cut(s) | 197 |
| NdeII | GATC | 8 cut(s) | 613, 1153, 1300, 1503, 1669, 1699, 2041, 2119 |
| NlaIII | CATG | 5 cut(s) | 326, 1154, 1367, 1634, 1820 |
| NlaIV | GGNNCC | 6 cut(s) | 151, 179, 214, 1560, 1985, 2141 |
| NsiI | ATGCAT | 1 cut(s) | 2066 |
| NspI | RCATGY | 1 cut(s) | 326 |
| NspV | TTCGAA | 1 cut(s) | 1248 |
| PciI | ACATGT | 1 cut(s) | 322 |
| PctI | GAATGC | 3 cut(s) | 1064, 1318, 2093 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1029 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 418 |
| PkrI | GCNGC | 7 cut(s) | 48, 51, 97, 270, 466, 1500, 2250 |
| PleI | GAGTC | 7 cut(s) | 26, 412, 697, 1231, 1450, 1720, 1860 |
| PluTI | GGCGCC | 1 cut(s) | 216 |
| PpsI | GAGTC | 7 cut(s) | 26, 412, 697, 1231, 1450, 1720, 1860 |
| PscI | ACATGT | 1 cut(s) | 322 |
| PsiI | TTATAA | 1 cut(s) | 2105 |
| Psp124BI | GAGCTC | 2 cut(s) | 135, 1681 |
| Psp6I | CCWGG | 4 cut(s) | 135, 291, 1554, 1782 |
| PspGI | CCWGG | 4 cut(s) | 135, 291, 1554, 1782 |
| PspN4I | GGNNCC | 6 cut(s) | 151, 179, 214, 1560, 1985, 2141 |
| PspPI | GGNCC | 2 cut(s) | 150, 409 |
| PsuI | RGATCY | 1 cut(s) | 2119 |
| PvuII | CAGCTG | 4 cut(s) | 271, 1243, 1501, 2248 |
| RsaI | GTAC | 6 cut(s) | 74, 287, 765, 1091, 1560, 1932 |
| RsaNI | GTAC | 6 cut(s) | 73, 286, 764, 1090, 1559, 1931 |
| SacI | GAGCTC | 2 cut(s) | 135, 1681 |
| SaqAI | TTAA | 7 cut(s) | 318, 794, 1064, 1080, 1278, 1463, 1766 |
| SatI | GCNGC | 7 cut(s) | 47, 50, 96, 269, 465, 1499, 2249 |
| Sau3AI | GATC | 8 cut(s) | 613, 1153, 1300, 1503, 1669, 1699, 2041, 2119 |
| Sau96I | GGNCC | 2 cut(s) | 150, 409 |
| SchI | GAGTC | 7 cut(s) | 26, 413, 698, 1231, 1451, 1721, 1861 |
| ScrFI | CCNGG | 5 cut(s) | 137, 197, 293, 1556, 1784 |
| SduI | GDGCHC | 2 cut(s) | 135, 1681 |
| SexAI | ACCWGGT | 1 cut(s) | 1782 |
| SfaNI | GCATC | 4 cut(s) | 613, 802, 1576, 1948 |
| SfoI | GGCGCC | 1 cut(s) | 214 |
| SfuI | TTCGAA | 1 cut(s) | 1248 |
| SinI | GGWCC | 1 cut(s) | 150 |
| SmlI | CTYRAG | 4 cut(s) | 947, 1157, 1709, 2123 |
| SmoI | CTYRAG | 4 cut(s) | 947, 1157, 1709, 2123 |
| SsiI | CCGC | 9 cut(s) | 49, 118, 142, 190, 245, 464, 784, 815, 1337 |
| SspDI | GGCGCC | 1 cut(s) | 212 |
| SspI | AATATT | 1 cut(s) | 1843 |
| SspMI | CTAG | 3 cut(s) | 279, 968, 2090 |
| SstI | GAGCTC | 2 cut(s) | 135, 1681 |
| StyD4I | CCNGG | 5 cut(s) | 135, 195, 291, 1554, 1782 |
| TaaI | ACNGT | 3 cut(s) | 177, 1800, 2173 |
| TaiI | ACGT | 1 cut(s) | 1520 |
| TaqI | TCGA | 3 cut(s) | 621, 1112, 1248 |
| TauI | GCSGC | 2 cut(s) | 52, 467 |
| Tru1I | TTAA | 7 cut(s) | 318, 794, 1064, 1080, 1278, 1463, 1766 |
| Tru9I | TTAA | 7 cut(s) | 318, 794, 1064, 1080, 1278, 1463, 1766 |
| TscAI | CASTG | 4 cut(s) | 1149, 1609, 1694, 2176 |
| TseI | GCWGC | 5 cut(s) | 46, 95, 268, 1498, 2248 |
| TspDTI | ATGAA | 8 cut(s) | 585, 608, 644, 1071, 1178, 1340, 1380, 1650 |
| TspGWI | ACGGA | 1 cut(s) | 1976 |
| TspRI | CASTG | 4 cut(s) | 1149, 1609, 1694, 2176 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 418 |
| VpaK11BI | GGWCC | 1 cut(s) | 150 |
| XapI | RAATTY | 5 cut(s) | 423, 1433, 1547, 1608, 1946 |
| XceI | RCATGY | 1 cut(s) | 326 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1029 |
| XspI | CTAG | 3 cut(s) | 279, 968, 2090 |
| Zsp2I | ATGCAT | 1 cut(s) | 2066 |