Rroxscaffold_6G00430170

Frigida-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
OG0016867
Physical Location & Seq
Forward (+)
50368801 .. 50371875
3075 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00430170.1

Sequence Viewer

Length: 2238 bp
ATGGAAGAGACAGCTCCGGTGACGGCGAAAGACTCGGACTTGAAGCGGCAGAGAAGCTTCGGCAAAGCGTACAAGACGTTCCAAACGCAGGCGACTTCGCTCGTCGGGTTGACCCGGCAGTTCAAGGAGCTCCAGGCGCGGTGGGGGTCCACGGAGGACAAGCTCCGGATGCGGTTCCGGGAAGTCCGGGACCGGGAAAGGGAGGTCGGCTTGAGAGAGAAGCAGTTGGAGGAGAAAGAGGCGAAGTGGAAGGTCGAGATGGAAGCGCAGAAGAAAGAGGAGGAATCGAGTAAGTACCACTTGCTTTTCCTGAGGCCATTGATCAGTAAACATGTTCAAGAGCTTGATGATTTGAAAGTGATGGTGAGTGAGAAGAAGAAAGAGCGTGATTTGATCGAAAAAAGGGGTTTAGAGTGGACTGGGAAATTGAATTTCGTTGAGAAATGTGTGGAGGAGAAGACGAAAGAGGTCGAGGCGAAGGAGGAGGAAGTGAGAGGGGTGGAAGGGAGGTTGAGGATTTATAGGGAGGAGATTGAGATGAAGGAGAGGGAGTTGAGTGGGATTTTGGGGTCAATAGAGGAGTGCAAGAGAGAATGTGGTTTGAAAGAAGAGGAAATTGAAGCGAAACGAAGGTACATTGATGAATGGGAGAAGGAGATGGAATTGAAGAGAGAGGAACTTGTTGATCAGCTTGATGCTATGAAAATACTAGTTAGAGAGAAGGGGAAGGAGTGTGAGTTGATCGAAAATCGGGTTTTGGAGTCATCAACGAGATCGTATTATTTTGGGAAATGTGTAGAAGAGAGGAGGAAAGAGTTTGAGGCTAAGGAAAAGGAACTGAAAGAGGTTCAGGGGTGTATTGAGTTAAAGGAGAGGGAATTAGATGGGATTTTGAAGTCCATTCAGGAGAACAAGAAAGAATGTGATTTGGAAGGAAAGCAATTTGAGGCATTGCAGAGGTCCGTTGAGAAATGTGAGAATGAGATGGAATTGAGAAGGGAGGAGTGGTCTCGTAAGCTTGAGTTGAAAGAGATGGAACTAGAAAGGTTGTTTGAGAAGTTTGAGTTGAGAGGGCAACAATTTGAGCCGATAGTTGAAGAGCTTCGTGTTATTGATAAGAGGGTGGATGGATGCTTAAATGAGGGTCTGTGTAAAGAGAGGTACTTGCAGACATGTGAAAAATTGATAAAAGAACGCGAAAGGTGTTTGGATTCAGTGTCCCATGAACTTAAGATGAAAGAGAGGCACATTGATGAGAAGGCCAAAGAGATTGAATTGAAGCAAATACAATTTTATTCTCAACTGAAAACTCAGCAGTTGGAAAGAAAAAAGCATTTTGCTTCACTTAAAAAAACGTTAGAACAACAAGAACAGTCTTTATATGCACTCCGAAAGTCGATAGAAGAGGTCAAAAAGCTTTTGGAAAGGCAACTTGAACAGCAGGGTGGAGTGATTGAATTGAAACAAAAACCATTTGATTCTCAGCAATTGGAAAGAGAAGAACTACTTGTTTTACTTGGAAAGTCGATAGATGAATCTGAAACGATGTTCAGCACTTTCCAAAAGTCAGTTCAAGAGCAGAAAATGCATTTGGATTCACTCTCCTATACACTCCATACAAGAGAGATGCAAGTTGAAAAGCAGGGCAAAGAGCTTGAATTGAGGTCAAAACATTCTGATTCTGGAGTGAATACTGAGCTGTTGGAACTTGCTCATGACGCTGATGACATGATTATTCCTCAATCTGTAAGTGATCAACCCAACATCAATACGGATGGTAGAAGCTTTGAGGTGATCCCTGGTATTATTTGGAATCTTATCAAAAGAAAGCAGCTGCTTAAGGCTGTTACATATATCTGCACCTTCAAGCAATTTGACAAGTTTCCCCTAGTACCAATCTTGAAAGAATTTGTGGAGGATGCAAAGAAGTCTTGCACTGAAATTTTCAGTAAAGAGATATCACATGATGTAAAGGAGAAGGTTGTAGATGACCTAATAGCTGATCTAAGAGCTGTGATTCGGTGCATTGAAGATCACAGCCTCGAGTCACAGTACCCACCAACTGACATTATGATGGAAATTCAAGGGCTTGGGGAACTAAAGGAGAATCCGAAGCTGCTATCTCTTGATTCTCTTCCGTCCAATGTTGAAAAACAAGAGCAGAGAAAAGGAAGGAAACGAAGTTCCAGCAGTGCTCCCCCCACATCTCACACATATCAGCTGCGTAAAAGAACATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Frigida

Protein Analysis

745

Amino Acids

88.19

Weight (kDa)

5.76

Isoelectric Point (pI)

58.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Frigida PF07899 599 - 705 5e-21 Frigida-like protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016867)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g04511 FvH4_6g04590 FvH4_6g04630
rosa_chinensis RchiOBHm_Chr3g0453101
rosa_laevigata RLG00000025537
rosa_multiflora Rmu_sc0009015.1_g000009
rosa_roxburghii Rroxscaffold_6G00430170
rosa_rugosa Rorug02G0646500 Rorug02G0646600
rosa_samantha Rh3AG049100 Rh3BG050300 Rh3CG050400 Rh3DG051100
rosa_wichuraiana Rw3G003760

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 2 cut(s) 139, 1197
AccIII TCCGGA 1 cut(s) 165
AciI CCGC 3 cut(s) 46, 139, 172
AclI AACGTT 1 cut(s) 1355
AclWI GGATC 1 cut(s) 1789
AcsI RAATTY 4 cut(s) 430, 1907, 1941, 2079
AfaI GTAC 6 cut(s) 71, 296, 635, 1163, 1893, 2054
AfiI CCNNNNNNNGG 3 cut(s) 88, 193, 199
AflII CTTAAG 2 cut(s) 1229, 1838
AflIII ACRYGT 2 cut(s) 331, 1172
AhlI ACTAGT 1 cut(s) 709
AjnI CCWGG 2 cut(s) 132, 1798
AjuI GAANNNNNNNTTGG 4 cut(s) 1554, 1574, 1586, 1606
AloI GAACNNNNNNTCC 2 cut(s) 2167, 2199
Alw21I GWGCWC 2 cut(s) 132, 2197
Alw26I GTCTC 2 cut(s) 2, 1014
AlwI GGATC 1 cut(s) 1789
Ama87I CYCGRG 1 cut(s) 2042
Aor13HI TCCGGA 1 cut(s) 165
AoxI GGCC 2 cut(s) 314, 1260
ApeKI GCWGC 4 cut(s) 1831, 1834, 2116, 2221
ApoI RAATTY 4 cut(s) 430, 1907, 1941, 2079
Asp700I GAANNNNTTC 1 cut(s) 1101
AspLEI GCGC 2 cut(s) 139, 268
AspS9I GGNCC 3 cut(s) 147, 190, 960
AsuC2I CCSGG 4 cut(s) 115, 179, 188, 194
AsuHPI GGTGA 3 cut(s) 31, 376, 1804
AvaI CYCGRG 1 cut(s) 2042
AvaII GGWCC 3 cut(s) 147, 190, 960
AxyI CCTNAGG 1 cut(s) 311
BanII GRGCYC 1 cut(s) 132
BbsI GAAGAC 1 cut(s) 464
Bbv12I GWGCWC 2 cut(s) 132, 2197
BbvI GCAGC 4 cut(s) 1821, 1843, 2103, 2208
BccI CCATC 9 cut(s) 253, 355, 652, 878, 979, 1027, 1121, 1769, 2068
BceAI ACGGC 1 cut(s) 39
BciT130I CCWGG 2 cut(s) 134, 1800
BclI TGATCA 3 cut(s) 321, 685, 1753
BcnI CCSGG 4 cut(s) 115, 179, 188, 194
BcoDI GTCTC 2 cut(s) 2, 1014
BcuI ACTAGT 1 cut(s) 709
BfaI CTAG 3 cut(s) 710, 1040, 1889
BfrI CTTAAG 2 cut(s) 1229, 1838
BisI GCNGC 5 cut(s) 47, 1832, 1835, 2117, 2222
BlsI GCNGC 5 cut(s) 48, 1833, 1836, 2118, 2223
Bme1390I CCNGG 6 cut(s) 115, 134, 179, 188, 194, 1800
Bme18I GGWCC 3 cut(s) 147, 190, 960
BmeT110I CYCGRG 1 cut(s) 2042
BmgT120I GGNCC 3 cut(s) 147, 190, 960
BmiI GGNNCC 3 cut(s) 148, 176, 191
BmrFI CCNGG 6 cut(s) 115, 134, 179, 188, 194, 1800
BmrI ACTGGG 1 cut(s) 429
BmsI GCATC 5 cut(s) 159, 685, 1121, 1617, 1909
BmuI ACTGGG 1 cut(s) 429
BpiI GAAGAC 1 cut(s) 464
BpmI CTGGAG 2 cut(s) 116, 1704
Bpu10I CCTNAGC 1 cut(s) 825
BpuEI CTTGAG 2 cut(s) 232, 1040
BpuMI CCSGG 4 cut(s) 115, 179, 188, 194
BsaI GGTCTC 1 cut(s) 1014
BsaJI CCNNGG 2 cut(s) 150, 1798
BsaWI WCCGGW 2 cut(s) 16, 165
BsaXI ACNNNNNCTCC 6 cut(s) 536, 566, 722, 752, 992, 1022
Bsc4I CCNNNNNNNGG 3 cut(s) 88, 193, 199
Bse1I ACTGG 1 cut(s) 424
Bse21I CCTNAGG 1 cut(s) 311
Bse3DI GCAATG 1 cut(s) 950
BseAI TCCGGA 1 cut(s) 165
BseBI CCWGG 2 cut(s) 134, 1800
BseDI CCNNGG 2 cut(s) 150, 1798
BseGI GGATG 5 cut(s) 174, 1132, 1136, 1780, 1924
BseLI CCNNNNNNNGG 3 cut(s) 88, 193, 199
BseMI GCAATG 1 cut(s) 950
BseMII CTCAG 4 cut(s) 302, 1325, 1496, 1686
BseNI ACTGG 1 cut(s) 424
BseRI GAGGAG 8 cut(s) 245, 293, 467, 497, 542, 593, 820, 1016
BseXI GCAGC 4 cut(s) 1821, 1843, 2103, 2208
BsgI GTGCAG 1 cut(s) 1843
Bsh1236I CGCG 2 cut(s) 139, 1197
BshFI GGCC 2 cut(s) 316, 1262
BsiHKAI GWGCWC 2 cut(s) 132, 2197
BsiHKCI CYCGRG 1 cut(s) 2042
BsiSI CCGG 6 cut(s) 17, 115, 166, 178, 187, 193
BslFI GGGAC 2 cut(s) 203, 1204
BslI CCNNNNNNNGG 3 cut(s) 88, 193, 199
BsmAI GTCTC 2 cut(s) 2, 1014
BsmFI GGGAC 2 cut(s) 203, 1204
BsnI GGCC 2 cut(s) 316, 1262
Bso31I GGTCTC 1 cut(s) 1014
BsoBI CYCGRG 1 cut(s) 2042
Bsp1286I GDGCHC 2 cut(s) 132, 2197
Bsp13I TCCGGA 1 cut(s) 165
Bsp143I GATC 9 cut(s) 321, 393, 685, 741, 773, 1753, 1794, 2002, 2032
BspACI CCGC 3 cut(s) 46, 139, 172
BspANI GGCC 2 cut(s) 316, 1262
BspCNI CTCAG 4 cut(s) 303, 1324, 1495, 1687
BspEI TCCGGA 1 cut(s) 165
BspFNI CGCG 2 cut(s) 139, 1197
BspHI TCATGA 1 cut(s) 1714
BspLI GGNNCC 3 cut(s) 148, 176, 191
BspPI GGATC 1 cut(s) 1789
BspQI GCTCTTC 1 cut(s) 1092
BspTI CTTAAG 2 cut(s) 1229, 1838
BspTNI GGTCTC 1 cut(s) 1014
BsrDI GCAATG 1 cut(s) 950
BsrI ACTGG 1 cut(s) 424
BssECI CCNNGG 2 cut(s) 150, 1798
BssMI GATC 9 cut(s) 321, 393, 685, 741, 773, 1753, 1794, 2002, 2032
Bst2UI CCWGG 2 cut(s) 134, 1800
Bst4CI ACNGT 2 cut(s) 1374, 2052
Bst6I CTCTTC 6 cut(s) 603, 662, 795, 1092, 1398, 2139
BstAFI CTTAAG 2 cut(s) 1229, 1838
BstAPI GCANNNNNTGC 1 cut(s) 1585
BstC8I GCNNGC 1 cut(s) 90
BstDEI CTNAG 6 cut(s) 311, 825, 1311, 1482, 1695, 2006
BstDSI CCRYGG 1 cut(s) 150
BstF5I GGATG 5 cut(s) 174, 1132, 1136, 1780, 1924
BstFNI CGCG 2 cut(s) 139, 1197
BstHHI GCGC 2 cut(s) 139, 268
BstKTI GATC 9 cut(s) 324, 396, 688, 744, 776, 1756, 1797, 2005, 2035
BstMAI GTCTC 2 cut(s) 2, 1014
BstMBI GATC 9 cut(s) 321, 393, 685, 741, 773, 1753, 1794, 2002, 2032
BstMWI GCNNNNNNNGC 4 cut(s) 136, 169, 1585, 1718
BstNI CCWGG 2 cut(s) 134, 1800
BstNSI RCATGY 2 cut(s) 335, 1176
BstSCI CCNGG 6 cut(s) 113, 132, 177, 186, 192, 1798
BstUI CGCG 2 cut(s) 139, 1197
BstV1I GCAGC 4 cut(s) 1821, 1843, 2103, 2208
BstV2I GAAGAC 1 cut(s) 464
Bsu36I CCTNAGG 1 cut(s) 311
BsuRI GGCC 2 cut(s) 316, 1262
BtgI CCRYGG 1 cut(s) 150
BtsCI GGATG 5 cut(s) 174, 1132, 1136, 1780, 1924
BtsI GCAGTG 1 cut(s) 2197
BtsIMutI CAGTG 3 cut(s) 1221, 1935, 2197
Cac8I GCNNGC 1 cut(s) 90
CciI TCATGA 1 cut(s) 1714
CfoI GCGC 2 cut(s) 139, 268
Cfr13I GGNCC 3 cut(s) 147, 190, 960
CseI GACGC 1 cut(s) 1727
Csp6I GTAC 6 cut(s) 70, 295, 634, 1162, 1892, 2053
CviAII CATG 6 cut(s) 332, 1173, 1223, 1715, 1729, 1964
CviQI GTAC 6 cut(s) 70, 295, 634, 1162, 1892, 2053
DdeI CTNAG 6 cut(s) 311, 825, 1311, 1482, 1695, 2006
DpnI GATC 9 cut(s) 323, 395, 687, 743, 775, 1755, 1796, 2004, 2034
DpnII GATC 9 cut(s) 321, 393, 685, 741, 773, 1753, 1794, 2002, 2032
Eam1104I CTCTTC 6 cut(s) 603, 662, 795, 1092, 1398, 2139
EarI CTCTTC 6 cut(s) 603, 662, 795, 1092, 1398, 2139
Ecl136II GAGCTC 1 cut(s) 130
Eco24I GRGCYC 1 cut(s) 132
Eco31I GGTCTC 1 cut(s) 1014
Eco32I GATATC 1 cut(s) 1959
Eco47I GGWCC 3 cut(s) 147, 190, 960
Eco53kI GAGCTC 1 cut(s) 130
Eco81I CCTNAGG 1 cut(s) 311
Eco88I CYCGRG 1 cut(s) 2042
EcoICRI GAGCTC 1 cut(s) 130
EcoRII CCWGG 2 cut(s) 132, 1798
EcoRV GATATC 1 cut(s) 1959
EcoT22I ATGCAT 1 cut(s) 1590
EcoT38I GRGCYC 1 cut(s) 132
FaeI CATG 6 cut(s) 335, 1176, 1226, 1718, 1732, 1967
FalI AAGNNNNNCTT 4 cut(s) 284, 316, 1491, 1523
FaqI GGGAC 2 cut(s) 203, 1204
FatI CATG 6 cut(s) 331, 1172, 1222, 1714, 1728, 1963
FbaI TGATCA 3 cut(s) 321, 685, 1753
Fnu4HI GCNGC 5 cut(s) 47, 1832, 1835, 2117, 2222
FokI GGATG 5 cut(s) 181, 1139, 1143, 1787, 1931
FriOI GRGCYC 1 cut(s) 132
Fsp4HI GCNGC 5 cut(s) 47, 1832, 1835, 2117, 2222
FspBI CTAG 3 cut(s) 710, 1040, 1889
GlaI GCGC 2 cut(s) 138, 267
GluI GCNGC 5 cut(s) 47, 1832, 1835, 2117, 2222
GsuI CTGGAG 2 cut(s) 116, 1704
HaeIII GGCC 2 cut(s) 316, 1262
HapII CCGG 6 cut(s) 17, 115, 166, 178, 187, 193
HgaI GACGC 1 cut(s) 1727
HhaI GCGC 2 cut(s) 139, 268
Hin1II CATG 6 cut(s) 335, 1176, 1226, 1718, 1732, 1967
Hin6I GCGC 2 cut(s) 137, 266
HinP1I GCGC 2 cut(s) 137, 266
HincII GTYRAC 1 cut(s) 111
HindII GTYRAC 1 cut(s) 111
HindIII AAGCTT 4 cut(s) 55, 1016, 1415, 1783
HpaII CCGG 6 cut(s) 17, 115, 166, 178, 187, 193
HphI GGTGA 3 cut(s) 31, 376, 1804
Hpy166II GTNNAC 4 cut(s) 111, 150, 329, 417
Hpy188I TCNGA 5 cut(s) 37, 1391, 1540, 1678, 2112
Hpy8I GTNNAC 4 cut(s) 111, 150, 329, 417
Hpy99I CGWCG 1 cut(s) 107
HpyCH4III ACNGT 2 cut(s) 1374, 2052
HpyCH4IV ACGT 2 cut(s) 77, 1355
HpyF10VI GCNNNNNNNGC 4 cut(s) 136, 169, 1585, 1718
HpyF3I CTNAG 6 cut(s) 311, 825, 1311, 1482, 1695, 2006
HpySE526I ACGT 2 cut(s) 77, 1355
Hsp92II CATG 6 cut(s) 335, 1176, 1226, 1718, 1732, 1967
HspAI GCGC 2 cut(s) 137, 266
Kpn2I TCCGGA 1 cut(s) 165
Ksp22I TGATCA 3 cut(s) 321, 685, 1753
Kzo9I GATC 9 cut(s) 321, 393, 685, 741, 773, 1753, 1794, 2002, 2032
LguI GCTCTTC 1 cut(s) 1092
LmnI GCTCC 5 cut(s) 19, 127, 135, 168, 2200
Lsp1109I GCAGC 4 cut(s) 1821, 1843, 2103, 2208
LweI GCATC 5 cut(s) 159, 685, 1121, 1617, 1909
MaeI CTAG 3 cut(s) 710, 1040, 1889
MaeII ACGT 2 cut(s) 77, 1355
MaeIII GTNAC 3 cut(s) 19, 1846, 2046
MalI GATC 9 cut(s) 323, 395, 687, 743, 775, 1755, 1796, 2004, 2034
MboI GATC 9 cut(s) 321, 393, 685, 741, 773, 1753, 1794, 2002, 2032
MfeI CAATTG 1 cut(s) 1487
MhlI GDGCHC 2 cut(s) 132, 2197
MlyI GAGTC 3 cut(s) 26, 770, 2054
MmeI TCCRAC 3 cut(s) 207, 1299, 1683
Mph1103I ATGCAT 1 cut(s) 1590
MroI TCCGGA 1 cut(s) 165
MroXI GAANNNNTTC 1 cut(s) 1101
MseI TTAA 5 cut(s) 866, 1136, 1230, 1347, 1839
MslI CAYNNNNRTG 2 cut(s) 1251, 2072
MspA1I CMGCKG 2 cut(s) 1834, 2221
MspCI CTTAAG 2 cut(s) 1229, 1838
MspI CCGG 6 cut(s) 17, 115, 166, 178, 187, 193
MspR9I CCNGG 6 cut(s) 115, 134, 179, 188, 194, 1800
MunI CAATTG 1 cut(s) 1487
MvaI CCWGG 2 cut(s) 134, 1800
MvnI CGCG 2 cut(s) 139, 1197
MwoI GCNNNNNNNGC 4 cut(s) 136, 169, 1585, 1718
NciI CCSGG 4 cut(s) 115, 179, 188, 194
NdeII GATC 9 cut(s) 321, 393, 685, 741, 773, 1753, 1794, 2002, 2032
NlaIII CATG 6 cut(s) 335, 1176, 1226, 1718, 1732, 1967
NlaIV GGNNCC 3 cut(s) 148, 176, 191
NmuCI GTSAC 2 cut(s) 19, 2046
NsiI ATGCAT 1 cut(s) 1590
NspI RCATGY 2 cut(s) 335, 1176
PaeR7I CTCGAG 1 cut(s) 2042
PagI TCATGA 1 cut(s) 1714
PciI ACATGT 2 cut(s) 331, 1172
PciSI GCTCTTC 1 cut(s) 1092
PdmI GAANNNNTTC 1 cut(s) 1101
PfoI TCCNGGA 2 cut(s) 177, 186
PkrI GCNGC 5 cut(s) 48, 1833, 1836, 2118, 2223
PleI GAGTC 3 cut(s) 26, 769, 2053
PpsI GAGTC 3 cut(s) 26, 769, 2053
PscI ACATGT 2 cut(s) 331, 1172
Psp124BI GAGCTC 1 cut(s) 132
Psp1406I AACGTT 1 cut(s) 1355
Psp6I CCWGG 2 cut(s) 132, 1798
PspGI CCWGG 2 cut(s) 132, 1798
PspN4I GGNNCC 3 cut(s) 148, 176, 191
PspPI GGNCC 3 cut(s) 147, 190, 960
PspXI VCTCGAGB 1 cut(s) 2042
PsrI GAACNNNNNNTAC 2 cut(s) 62, 94
PvuII CAGCTG 2 cut(s) 1834, 2221
RsaI GTAC 6 cut(s) 71, 296, 635, 1163, 1893, 2054
RsaNI GTAC 6 cut(s) 70, 295, 634, 1162, 1892, 2053
RseI CAYNNNNRTG 2 cut(s) 1251, 2072
SacI GAGCTC 1 cut(s) 132
SapI GCTCTTC 1 cut(s) 1092
SaqAI TTAA 5 cut(s) 866, 1136, 1230, 1347, 1839
SatI GCNGC 5 cut(s) 47, 1832, 1835, 2117, 2222
Sau3AI GATC 9 cut(s) 321, 393, 685, 741, 773, 1753, 1794, 2002, 2032
Sau96I GGNCC 3 cut(s) 147, 190, 960
SchI GAGTC 3 cut(s) 26, 770, 2054
ScrFI CCNGG 6 cut(s) 115, 134, 179, 188, 194, 1800
SduI GDGCHC 2 cut(s) 132, 2197
SfaNI GCATC 5 cut(s) 159, 685, 1121, 1617, 1909
Sfr274I CTCGAG 1 cut(s) 2042
SinI GGWCC 3 cut(s) 147, 190, 960
SlaI CTCGAG 1 cut(s) 2042
SmiMI CAYNNNNRTG 2 cut(s) 1251, 2072
SmlI CTYRAG 5 cut(s) 211, 1019, 1229, 1838, 2042
SmoI CTYRAG 5 cut(s) 211, 1019, 1229, 1838, 2042
SpeI ACTAGT 1 cut(s) 709
SsiI CCGC 3 cut(s) 46, 139, 172
SspMI CTAG 3 cut(s) 710, 1040, 1889
SstI GAGCTC 1 cut(s) 132
StyD4I CCNGG 6 cut(s) 113, 132, 177, 186, 192, 1798
TaaI ACNGT 2 cut(s) 1374, 2052
TaiI ACGT 2 cut(s) 80, 1358
TaqI TCGA 8 cut(s) 255, 287, 396, 471, 744, 1397, 1526, 2043
TauI GCSGC 1 cut(s) 49
Tru1I TTAA 5 cut(s) 866, 1136, 1230, 1347, 1839
Tru9I TTAA 5 cut(s) 866, 1136, 1230, 1347, 1839
TscAI CASTG 3 cut(s) 1221, 1942, 2197
TseFI GTSAC 2 cut(s) 19, 2046
TseI GCWGC 4 cut(s) 1831, 1834, 2116, 2221
Tsp45I GTSAC 2 cut(s) 19, 2046
TspDTI ATGAA 6 cut(s) 554, 657, 716, 1239, 1250, 1548
TspGWI ACGGA 4 cut(s) 167, 952, 1787, 2127
TspRI CASTG 3 cut(s) 1221, 1942, 2197
Vha464I CTTAAG 2 cut(s) 1229, 1838
VpaK11BI GGWCC 3 cut(s) 147, 190, 960
XapI RAATTY 4 cut(s) 430, 1907, 1941, 2079
XceI RCATGY 2 cut(s) 335, 1176
XhoI CTCGAG 1 cut(s) 2042
XmnI GAANNNNTTC 1 cut(s) 1101
XspI CTAG 3 cut(s) 710, 1040, 1889
Zsp2I ATGCAT 1 cut(s) 1590
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.