FvH4_6g05770

Mitochondrial Rho GTPase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0009905
Physical Location & Seq
Forward (+)
3280473 .. 3287084
6612 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g05770.t3

Sequence Viewer

Length: 1950 bp
ATGGCGAGAACTGCAGCTGGAAACGCGAACCAGCACCACGGCGGCCGGACGGCGGTTCGGATTGTGGTGGCGGGAGACCAGGGGACTGGAAAATCGAGCTTGATTGTGACGGCGGCGGCGGAGAACTATCCGGCGAATGTGCCTCCGCTGCTGCCGCCTACACGGTTGCCTGAAGATTTCTACCCCGAGCGTGTGCCTATTACGATTATTGATACTTCTTCTAAGCCGGAAGATAATGTTAAAGTTGCGGAAGATTTGAAGGCTGCTGATGCAGTTGTGCTAACTTATGCTTGTGATCAGCCTCATACACTTGACCGGTTGAGTACCTTTTGGCTTCCAAAGCTTCGTCAGCTAGAGGTAAGGGTTCCTGTTATAGTCGTTGGTTGTAAGCTCGATTTGAGAGATGAGAACCACGAGGTGAGCCTGGAGCAAGTGATGTCACCAATAATGCAACAGTTTCGGGAAATTGAAACTTGCATAGAGTGTTCGGCATTTAAACATATTCAGATTCCAGAGGTTTTTTACTATGCACAAAAAGCTGTTCTTCACCCAACAGCCCCATTATTCGATCAGGAAACACAGACTTTGAAGGACCAATGCGTGCGAGCCTTGAAGCGGATATTCATTCTCTGTGATCATGACAGGGATGGTGCCCTTAGTGATCCAGAATTGAATGATTTCCAGGTTAAATGTTTCAATGCTCCACTACAACCTTCTGAAATAGTGGGTGTGAAGAGGGTTGTGCAAGAGAAGTTACCAGAAGGAGTCAATGACCAGGGGCTTACACTGACAGGATTCCTCTTCCTGCATGCACTATTTATAGAGAAGGGACGTCTAGAGACAACTTGGACTGTTCTCAGGAAGTTTGGCTATAACAATGATATACGACTTTCAGAAGAACTAATTCCAAATATCCCAAAACGGACTTCAGACCAGAGTGTGGAGCTGACAAATGAAGCAATCGATTTTCTGAGTGCAACATTTAACTTATATGACGATGACCGTGACGGGGCCCTACGACCACGGGAACTGGAAGAACTATTTTCGACTGCTCCTGTAAGTCCATTTAGTGAATTTCCATACAAAGAAGCTGAAGAGAGAAATGCATTTGGAGGCCTCTCACTTGACGGGTTCTTGTCACAGTGGGCCCTCATGACACTCCTAAACCCAGCTTCTACCATGGAGAATCTTATATACATTGGTTATGCTGGTGATGTTTCCTCTGCAATCCGTGTTACTAGGAAAAGGCGTTTAGATCGCAAGAAACAACAATCAGAAAGAAATGTCTTCCAATGCTTCGTCTTCGGCCCAAAGAAGGCTGGAAAGTCTGCATTGTTGGATTCTTTTCTTGGAAGGCCATTTTCTGATAACTATCATCCCACCACCGAGGAACGTTATGCAGTTAACCATGTTGATCAGCCTGGGGGAACCAAGAAATTCCTAGTGTTGAGAGAAGTTCCCGAAGATGGAGTTAGCAAATTACTGTCTAGTAAAGATGCTTTGGCTGCTTGTGACATAGCTGTATTTGTTCACGACAGTTCTGATGAATTGTCTTGGAAGAGAGCAACTGAGTTGCTGGTAGAAGTTGCTAGTCATGGTGAGAATACTGGTTTTGAGGTGCCTTGCCTCATTGTTGCAGCTAAGGATGATCTGGATTCATTTCCATTGGCCATACAGCATTCTACAAGGGTCAGTCAGGATATGGGAACAGAGGCTCCTATACCTATTAGCACGAAGTTGGGTGATTTCAACAGTGTATTTCGTAAAATCGTAAGTGCTGCGGAGCACCCACATTTGAGTATTCCCGAGACGGAGGCTGGGAGGAGTCGCAAGCAATATCACAGGCTCATAAACCGCTCGCTCATGTTTGTTTCAGTGGGAGCTGCAGTGGCCATTGTTGGACTGGCGGCTTACCGCGTCTATGCTGCAAGGAAGAATGCCTCCAGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000902 GO:0000904 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005741 GO:0006810 GO:0006839 GO:0006915 GO:0006928 GO:0006996 GO:0007005 GO:0007006 GO:0007017 GO:0007018 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008219 GO:0008637 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009826 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0010154 GO:0010970 GO:0012501 GO:0016020 GO:0016021 GO:0016043 GO:0016049 GO:0019725 GO:0019867 GO:0022414 GO:0023052 GO:0030154 GO:0030705 GO:0031090 GO:0031224 GO:0031300 GO:0031301 GO:0031306 GO:0031307 GO:0031966 GO:0031967 GO:0031968 GO:0031975 GO:0032501 GO:0032502 GO:0032592 GO:0032989 GO:0034643 GO:0035794 GO:0040007 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044444 GO:0044446 GO:0044455 GO:0044464 GO:0044706 GO:0046902 GO:0046907 GO:0047497 GO:0048316 GO:0048468 GO:0048588 GO:0048589 GO:0048608 GO:0048731 GO:0048856 GO:0048868 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0051646 GO:0051649 GO:0051654 GO:0051656 GO:0051704 GO:0051716 GO:0060560 GO:0061024 GO:0061458 GO:0065007 GO:0065008 GO:0071840 GO:0072384 GO:0090559 GO:0097190 GO:0097345 GO:0098573 GO:0098588 GO:0098805 GO:0099111 GO:1902108 GO:1902110 GO:1902686 GO:1905710
KEGG Pathways
Metabolic & Signaling
ko04137 ko04214 map04137 map04214
Pfam Domains
Protein Families
EF_assoc_1 EF_assoc_2 Ras

Protein Analysis

650

Amino Acids

72.24

Weight (kDa)

5.69

Isoelectric Point (pI)

45.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EF_assoc_2 PF08356 90 - 174 1.8e-29 EF hand associated
EF_assoc_1 PF08355 215 - 279 3.2e-22 EF hand associated
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 835
AccB1I GGYRCC 2 cut(s) 650, 1618
AccB7I CCANNNNNTGG 1 cut(s) 940
AccBSI CCGCTC 1 cut(s) 1857
AccII CGCG 2 cut(s) 26, 1917
AclI AACGTT 1 cut(s) 1393
AclWI GGATC 1 cut(s) 656
AcoI YGGCCR 3 cut(s) 43, 1668, 1890
AcsI RAATTY 2 cut(s) 1073, 1436
AcuI CTGAAG 3 cut(s) 192, 912, 1113
AcyI GRCGYC 1 cut(s) 832
AdeI CACNNNGTG 1 cut(s) 418
AfaI GTAC 1 cut(s) 325
AfiI CCNNNNNNNGG 6 cut(s) 52, 615, 940, 1009, 1315, 1466
AgeI ACCGGT 1 cut(s) 315
AgsI TTSAA 7 cut(s) 259, 470, 589, 613, 673, 697, 1750
AjnI CCWGG 5 cut(s) 78, 423, 681, 774, 1420
AjuI GAANNNNNNNTTGG 2 cut(s) 910, 942
AloI GAACNNNNNNTCC 2 cut(s) 1699, 1731
Alw21I GWGCWC 1 cut(s) 1788
Alw26I GTCTC 3 cut(s) 69, 833, 1802
AlwI GGATC 1 cut(s) 656
Ama87I CYCGRG 2 cut(s) 185, 1805
AoxI GGCC 8 cut(s) 43, 1011, 1114, 1146, 1306, 1355, 1668, 1890
ApaI GGGCCC 2 cut(s) 1015, 1150
ApeKI GCWGC 9 cut(s) 14, 148, 151, 263, 1505, 1637, 1778, 1883, 1925
ApoI RAATTY 2 cut(s) 1073, 1436
AsiGI ACCGGT 1 cut(s) 315
Asp700I GAANNNNTTC 2 cut(s) 677, 903
AspS9I GGNCC 6 cut(s) 592, 1011, 1012, 1146, 1147, 1307
AsuHPI GGTGA 6 cut(s) 430, 432, 539, 1223, 1610, 1754
AvaI CYCGRG 2 cut(s) 185, 1805
AvaII GGWCC 1 cut(s) 592
BaeGI GKGCMC 3 cut(s) 655, 1015, 1150
BalI TGGCCA 2 cut(s) 1670, 1892
BanI GGYRCC 2 cut(s) 650, 1618
BanII GRGCYC 2 cut(s) 1015, 1150
BauI CACGAG 1 cut(s) 413
BbsI GAAGAC 2 cut(s) 1279, 1294
Bbv12I GWGCWC 1 cut(s) 1788
BbvI GCAGC 9 cut(s) 26, 135, 138, 250, 1492, 1649, 1765, 1870, 1912
BccI CCATC 2 cut(s) 641, 1460
BceAI ACGGC 3 cut(s) 55, 66, 126
BcgI CGANNNNNNTGC 2 cut(s) 440, 474
BciT130I CCWGG 5 cut(s) 80, 425, 683, 776, 1422
BclI TGATCA 3 cut(s) 295, 634, 1414
BcoDI GTCTC 3 cut(s) 69, 833, 1802
BfaI CTAG 6 cut(s) 353, 836, 1239, 1442, 1488, 1590
BfmI CTRYAG 2 cut(s) 12, 1884
Bme1390I CCNGG 5 cut(s) 80, 425, 683, 776, 1422
Bme18I GGWCC 1 cut(s) 592
BmeT110I CYCGRG 2 cut(s) 185, 1805
BmgT120I GGNCC 6 cut(s) 592, 1011, 1012, 1146, 1147, 1307
BmiI GGNNCC 8 cut(s) 366, 652, 1012, 1013, 1148, 1429, 1620, 1716
BmrFI CCNGG 5 cut(s) 80, 425, 683, 776, 1422
BmsI GCATC 2 cut(s) 259, 1486
BpiI GAAGAC 2 cut(s) 1279, 1294
BpmI CTGGAG 2 cut(s) 446, 1927
Bpu10I CCTNAGC 1 cut(s) 1641
Bsa29I ATCGAT 1 cut(s) 963
BsaBI GATNNNNATC 1 cut(s) 1371
BsaHI GRCGYC 1 cut(s) 832
BsaI GGTCTC 1 cut(s) 69
BsaJI CCNNGG 7 cut(s) 37, 79, 775, 1022, 1179, 1386, 1421
BsaWI WCCGGW 1 cut(s) 315
BsaXI ACNNNNNCTCC 4 cut(s) 1699, 1729, 1872, 1902
Bsc4I CCNNNNNNNGG 6 cut(s) 52, 615, 940, 1009, 1315, 1466
Bse118I RCCGGY 1 cut(s) 315
Bse1I ACTGG 5 cut(s) 91, 1035, 1612, 1908, 1944
Bse8I GATNNNNATC 1 cut(s) 1371
BseBI CCWGG 5 cut(s) 80, 425, 683, 776, 1422
BseCI ATCGAT 1 cut(s) 963
BseDI CCNNGG 7 cut(s) 37, 79, 775, 1022, 1179, 1386, 1421
BseGI GGATG 3 cut(s) 652, 1375, 1651
BseJI GATNNNNATC 1 cut(s) 1371
BseLI CCNNNNNNNGG 6 cut(s) 52, 615, 940, 1009, 1315, 1466
BseMII CTCAG 3 cut(s) 871, 962, 1560
BseNI ACTGG 5 cut(s) 91, 1035, 1612, 1908, 1944
BseRI GAGGAG 1 cut(s) 1837
BseSI GKGCMC 3 cut(s) 655, 1015, 1150
BseX3I CGGCCG 1 cut(s) 43
BseXI GCAGC 9 cut(s) 26, 135, 138, 250, 1492, 1649, 1765, 1870, 1912
BseYI CCCAGC 2 cut(s) 1168, 1817
Bsh1236I CGCG 2 cut(s) 26, 1917
Bsh1285I CGRYCG 1 cut(s) 46
BshFI GGCC 8 cut(s) 45, 1013, 1116, 1148, 1308, 1357, 1670, 1892
BshNI GGYRCC 2 cut(s) 650, 1618
BshTI ACCGGT 1 cut(s) 315
BshVI ATCGAT 1 cut(s) 963
BsiEI CGRYCG 1 cut(s) 46
BsiHKAI GWGCWC 1 cut(s) 1788
BsiHKCI CYCGRG 2 cut(s) 185, 1805
BsiSI CCGG 4 cut(s) 46, 131, 227, 316
BslFI GGGAC 2 cut(s) 97, 843
BslI CCNNNNNNNGG 6 cut(s) 52, 615, 940, 1009, 1315, 1466
BsmAI GTCTC 3 cut(s) 69, 833, 1802
BsmBI CGTCTC 1 cut(s) 1802
BsmFI GGGAC 2 cut(s) 97, 843
BsmI GAATGC 2 cut(s) 1678, 1942
BsnI GGCC 8 cut(s) 45, 1013, 1116, 1148, 1308, 1357, 1670, 1892
Bso31I GGTCTC 1 cut(s) 69
BsoBI CYCGRG 2 cut(s) 185, 1805
Bsp120I GGGCCC 2 cut(s) 1011, 1146
Bsp1286I GDGCHC 4 cut(s) 655, 1015, 1150, 1788
Bsp143I GATC 7 cut(s) 295, 568, 634, 661, 1255, 1414, 1648
Bsp19I CCATGG 1 cut(s) 1179
BspANI GGCC 8 cut(s) 45, 1013, 1116, 1148, 1308, 1357, 1670, 1892
BspCNI CTCAG 3 cut(s) 870, 963, 1561
BspDI ATCGAT 1 cut(s) 963
BspFNI CGCG 2 cut(s) 26, 1917
BspHI TCATGA 2 cut(s) 637, 1152
BspLI GGNNCC 8 cut(s) 366, 652, 1012, 1013, 1148, 1429, 1620, 1716
BspMAI CTGCAG 2 cut(s) 16, 1888
BspPI GGATC 1 cut(s) 656
BspT107I GGYRCC 2 cut(s) 650, 1618
BspTNI GGTCTC 1 cut(s) 69
BsrBI CCGCTC 1 cut(s) 1857
BsrFI RCCGGY 1 cut(s) 315
BsrI ACTGG 5 cut(s) 91, 1035, 1612, 1908, 1944
BssAI RCCGGY 1 cut(s) 315
BssECI CCNNGG 7 cut(s) 37, 79, 775, 1022, 1179, 1386, 1421
BssMI GATC 7 cut(s) 295, 568, 634, 661, 1255, 1414, 1648
BssNI GRCGYC 1 cut(s) 832
BssSI CACGAG 1 cut(s) 413
BssT1I CCWWGG 1 cut(s) 1179
Bst2BI CACGAG 1 cut(s) 413
Bst2UI CCWGG 5 cut(s) 80, 425, 683, 776, 1422
Bst4CI ACNGT 8 cut(s) 165, 456, 853, 1004, 1143, 1485, 1538, 1754
Bst6I CTCTTC 4 cut(s) 728, 806, 1089, 1553
BstACI GRCGYC 1 cut(s) 832
BstC8I GCNNGC 5 cut(s) 602, 606, 810, 1832, 1859
BstDEI CTNAG 6 cut(s) 222, 656, 857, 971, 1569, 1641
BstDSI CCRYGG 3 cut(s) 37, 1022, 1179
BstF5I GGATG 3 cut(s) 652, 1375, 1651
BstFNI CGCG 2 cut(s) 26, 1917
BstKTI GATC 7 cut(s) 298, 571, 637, 664, 1258, 1417, 1651
BstMAI GTCTC 3 cut(s) 69, 833, 1802
BstMBI GATC 7 cut(s) 295, 568, 634, 661, 1255, 1414, 1648
BstMCI CGRYCG 1 cut(s) 46
BstNI CCWGG 5 cut(s) 80, 425, 683, 776, 1422
BstNSI RCATGY 1 cut(s) 812
BstSCI CCNGG 5 cut(s) 78, 423, 681, 774, 1420
BstSFI CTRYAG 2 cut(s) 12, 1884
BstSLI GKGCMC 3 cut(s) 655, 1015, 1150
BstUI CGCG 2 cut(s) 26, 1917
BstV1I GCAGC 9 cut(s) 26, 135, 138, 250, 1492, 1649, 1765, 1870, 1912
BstV2I GAAGAC 2 cut(s) 1279, 1294
BstXI CCANNNNNNTGG 1 cut(s) 86
BstZI CGGCCG 1 cut(s) 43
Bsu15I ATCGAT 1 cut(s) 963
BsuRI GGCC 8 cut(s) 45, 1013, 1116, 1148, 1308, 1357, 1670, 1892
BsuTUI ATCGAT 1 cut(s) 963
BtgI CCRYGG 3 cut(s) 37, 1022, 1179
BtsCI GGATG 3 cut(s) 652, 1375, 1651
BtsI GCAGTG 1 cut(s) 1893
BtsIMutI CAGTG 5 cut(s) 785, 1148, 1759, 1881, 1893
Cac8I GCNNGC 5 cut(s) 602, 606, 810, 1832, 1859
CciI TCATGA 2 cut(s) 637, 1152
Cfr10I RCCGGY 1 cut(s) 315
Cfr13I GGNCC 6 cut(s) 592, 1011, 1012, 1146, 1147, 1307
ClaI ATCGAT 1 cut(s) 963
CseI GACGC 1 cut(s) 1906
Csp6I GTAC 1 cut(s) 324
CspAI ACCGGT 1 cut(s) 315
CviAII CATG 7 cut(s) 638, 809, 1153, 1180, 1409, 1595, 1864
CviQI GTAC 1 cut(s) 324
DdeI CTNAG 6 cut(s) 222, 656, 857, 971, 1569, 1641
DpnI GATC 7 cut(s) 297, 570, 636, 663, 1257, 1416, 1650
DpnII GATC 7 cut(s) 295, 568, 634, 661, 1255, 1414, 1648
DraI TTTAAA 1 cut(s) 496
DraIII CACNNNGTG 1 cut(s) 418
EaeI YGGCCR 3 cut(s) 43, 1668, 1890
EagI CGGCCG 1 cut(s) 43
Eam1104I CTCTTC 4 cut(s) 728, 806, 1089, 1553
EarI CTCTTC 4 cut(s) 728, 806, 1089, 1553
EciI GGCGGA 1 cut(s) 134
EclXI CGGCCG 1 cut(s) 43
Eco130I CCWWGG 1 cut(s) 1179
Eco147I AGGCCT 1 cut(s) 1116
Eco24I GRGCYC 2 cut(s) 1015, 1150
Eco31I GGTCTC 1 cut(s) 69
Eco47I GGWCC 1 cut(s) 592
Eco52I CGGCCG 1 cut(s) 43
Eco57I CTGAAG 3 cut(s) 192, 912, 1113
Eco88I CYCGRG 2 cut(s) 185, 1805
EcoO109I RGGNCCY 3 cut(s) 1011, 1012, 1147
EcoRII CCWGG 5 cut(s) 78, 423, 681, 774, 1420
EcoT14I CCWWGG 1 cut(s) 1179
EcoT22I ATGCAT 1 cut(s) 1108
EcoT38I GRGCYC 2 cut(s) 1015, 1150
ErhI CCWWGG 1 cut(s) 1179
Esp3I CGTCTC 1 cut(s) 1802
FaeI CATG 7 cut(s) 641, 812, 1156, 1183, 1412, 1598, 1867
FalI AAGNNNNNCTT 2 cut(s) 528, 560
FaqI GGGAC 2 cut(s) 97, 843
FatI CATG 7 cut(s) 637, 808, 1152, 1179, 1408, 1594, 1863
FauI CCCGC 1 cut(s) 64
FbaI TGATCA 3 cut(s) 295, 634, 1414
FokI GGATG 3 cut(s) 659, 1362, 1658
FriOI GRGCYC 2 cut(s) 1015, 1150
FspBI CTAG 6 cut(s) 353, 836, 1239, 1442, 1488, 1590
GsaI CCCAGC 2 cut(s) 1172, 1821
GsuI CTGGAG 2 cut(s) 446, 1927
HaeIII GGCC 8 cut(s) 45, 1013, 1116, 1148, 1308, 1357, 1670, 1892
HapII CCGG 4 cut(s) 46, 131, 227, 316
HgaI GACGC 1 cut(s) 1906
Hin1I GRCGYC 1 cut(s) 832
Hin1II CATG 7 cut(s) 641, 812, 1156, 1183, 1412, 1598, 1867
HincII GTYRAC 1 cut(s) 1405
HindII GTYRAC 1 cut(s) 1405
HindIII AAGCTT 1 cut(s) 341
HinfI GANTC 7 cut(s) 508, 765, 795, 1186, 1340, 1655, 1825
HpaI GTTAAC 1 cut(s) 1405
HpaII CCGG 4 cut(s) 46, 131, 227, 316
HphI GGTGA 6 cut(s) 430, 432, 539, 1223, 1610, 1754
Hpy166II GTNNAC 2 cut(s) 1405, 1531
Hpy188I TCNGA 9 cut(s) 60, 507, 718, 895, 931, 972, 1276, 1366, 1543
Hpy8I GTNNAC 2 cut(s) 1405, 1531
HpyAV CCTTC 7 cut(s) 253, 583, 723, 755, 820, 1309, 1347
HpyCH4III ACNGT 8 cut(s) 165, 456, 853, 1004, 1143, 1485, 1538, 1754
HpyCH4IV ACGT 2 cut(s) 832, 1393
HpyF3I CTNAG 6 cut(s) 222, 656, 857, 971, 1569, 1641
HpySE526I ACGT 2 cut(s) 832, 1393
Hsp92I GRCGYC 1 cut(s) 832
Hsp92II CATG 7 cut(s) 641, 812, 1156, 1183, 1412, 1598, 1867
Ksp22I TGATCA 3 cut(s) 295, 634, 1414
KspAI GTTAAC 1 cut(s) 1405
Kzo9I GATC 7 cut(s) 295, 568, 634, 661, 1255, 1414, 1648
LmnI GCTCC 7 cut(s) 427, 706, 943, 1057, 1720, 1783, 1880
Lsp1109I GCAGC 9 cut(s) 26, 135, 138, 250, 1492, 1649, 1765, 1870, 1912
LweI GCATC 2 cut(s) 259, 1486
MaeI CTAG 6 cut(s) 353, 836, 1239, 1442, 1488, 1590
MaeII ACGT 2 cut(s) 832, 1393
MaeIII GTNAC 7 cut(s) 106, 438, 753, 1004, 1137, 1234, 1511
MalI GATC 7 cut(s) 297, 570, 636, 663, 1257, 1416, 1650
MbiI CCGCTC 1 cut(s) 1857
MboI GATC 7 cut(s) 295, 568, 634, 661, 1255, 1414, 1648
MhlI GDGCHC 4 cut(s) 655, 1015, 1150, 1788
MlsI TGGCCA 2 cut(s) 1670, 1892
MluCI AATT 7 cut(s) 465, 668, 903, 1073, 1436, 1478, 1547
MluNI TGGCCA 2 cut(s) 1670, 1892
MlyI GAGTC 2 cut(s) 774, 1834
MmeI TCCRAC 2 cut(s) 1317, 1879
Mox20I TGGCCA 2 cut(s) 1670, 1892
Mph1103I ATGCAT 1 cut(s) 1108
MroXI GAANNNNTTC 2 cut(s) 677, 903
MscI TGGCCA 2 cut(s) 1670, 1892
MseI TTAA 6 cut(s) 240, 495, 687, 984, 1404, 1948
Msp20I TGGCCA 2 cut(s) 1670, 1892
MspA1I CMGCKG 2 cut(s) 17, 148
MspI CCGG 4 cut(s) 46, 131, 227, 316
MspR9I CCNGG 5 cut(s) 80, 425, 683, 776, 1422
Mva1269I GAATGC 2 cut(s) 1678, 1942
MvaI CCWGG 5 cut(s) 80, 425, 683, 776, 1422
MvnI CGCG 2 cut(s) 26, 1917
NcoI CCATGG 1 cut(s) 1179
NdeII GATC 7 cut(s) 295, 568, 634, 661, 1255, 1414, 1648
NlaIII CATG 7 cut(s) 641, 812, 1156, 1183, 1412, 1598, 1867
NlaIV GGNNCC 8 cut(s) 366, 652, 1012, 1013, 1148, 1429, 1620, 1716
NmuCI GTSAC 5 cut(s) 106, 438, 1004, 1137, 1511
NsiI ATGCAT 1 cut(s) 1108
NspI RCATGY 1 cut(s) 812
PaeI GCATGC 1 cut(s) 812
PagI TCATGA 2 cut(s) 637, 1152
PceI AGGCCT 1 cut(s) 1116
PctI GAATGC 2 cut(s) 1678, 1942
PdmI GAANNNNTTC 2 cut(s) 677, 903
PfeI GAWTC 5 cut(s) 508, 795, 1186, 1340, 1655
PflMI CCANNNNNTGG 1 cut(s) 940
PinAI ACCGGT 1 cut(s) 315
PleI GAGTC 2 cut(s) 773, 1833
PpsI GAGTC 2 cut(s) 773, 1833
Psp1406I AACGTT 1 cut(s) 1393
Psp6I CCWGG 5 cut(s) 78, 423, 681, 774, 1420
PspFI CCCAGC 2 cut(s) 1168, 1817
PspGI CCWGG 5 cut(s) 78, 423, 681, 774, 1420
PspN4I GGNNCC 8 cut(s) 366, 652, 1012, 1013, 1148, 1429, 1620, 1716
PspOMI GGGCCC 2 cut(s) 1011, 1146
PspPI GGNCC 6 cut(s) 592, 1011, 1012, 1146, 1147, 1307
PstI CTGCAG 2 cut(s) 16, 1888
PvuII CAGCTG 1 cut(s) 17
RsaI GTAC 1 cut(s) 325
RsaNI GTAC 1 cut(s) 324
SaqAI TTAA 6 cut(s) 240, 495, 687, 984, 1404, 1948
Sau3AI GATC 7 cut(s) 295, 568, 634, 661, 1255, 1414, 1648
Sau96I GGNCC 6 cut(s) 592, 1011, 1012, 1146, 1147, 1307
SchI GAGTC 2 cut(s) 774, 1834
ScrFI CCNGG 5 cut(s) 80, 425, 683, 776, 1422
SduI GDGCHC 4 cut(s) 655, 1015, 1150, 1788
SfaNI GCATC 2 cut(s) 259, 1486
SfcI CTRYAG 2 cut(s) 12, 1884
SinI GGWCC 1 cut(s) 592
SphI GCATGC 1 cut(s) 812
Sse9I AATT 7 cut(s) 465, 668, 903, 1073, 1436, 1478, 1547
SseBI AGGCCT 1 cut(s) 1116
SspMI CTAG 6 cut(s) 353, 836, 1239, 1442, 1488, 1590
StuI AGGCCT 1 cut(s) 1116
StyD4I CCNGG 5 cut(s) 78, 423, 681, 774, 1420
StyI CCWWGG 1 cut(s) 1179
TaaI ACNGT 8 cut(s) 165, 456, 853, 1004, 1143, 1485, 1538, 1754
TaiI ACGT 2 cut(s) 835, 1396
TaqI TCGA 5 cut(s) 95, 393, 567, 963, 1046
TasI AATT 7 cut(s) 465, 668, 903, 1073, 1436, 1478, 1547
TauI GCSGC 5 cut(s) 45, 116, 119, 157, 1910
TfiI GAWTC 5 cut(s) 508, 795, 1186, 1340, 1655
Tru1I TTAA 6 cut(s) 240, 495, 687, 984, 1404, 1948
Tru9I TTAA 6 cut(s) 240, 495, 687, 984, 1404, 1948
TscAI CASTG 5 cut(s) 792, 1148, 1759, 1881, 1893
TseFI GTSAC 5 cut(s) 106, 438, 1004, 1137, 1511
TseI GCWGC 9 cut(s) 14, 148, 151, 263, 1505, 1637, 1778, 1883, 1925
Tsp45I GTSAC 5 cut(s) 106, 438, 1004, 1137, 1511
TspDTI ATGAA 4 cut(s) 613, 969, 1560, 1647
TspGWI ACGGA 3 cut(s) 937, 1220, 1826
TspRI CASTG 5 cut(s) 792, 1148, 1759, 1881, 1893
Van91I CCANNNNNTGG 1 cut(s) 940
VpaK11BI GGWCC 1 cut(s) 592
XapI RAATTY 2 cut(s) 1073, 1436
XbaI TCTAGA 1 cut(s) 835
XceI RCATGY 1 cut(s) 812
XcmI CCANNNNNNNNNTGG 1 cut(s) 1900
XmnI GAANNNNTTC 2 cut(s) 677, 903
XspI CTAG 6 cut(s) 353, 836, 1239, 1442, 1488, 1590
ZraI GACGTC 1 cut(s) 833
Zsp2I ATGCAT 1 cut(s) 1108
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.