Rmu_sc0001792.1_g000029

Mitochondrial Rho GTPase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001792.1
OG0009905
Physical Location & Seq
Reverse (-)
110411 .. 117859
7449 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001792.1_g000029.1.cds

Sequence Viewer

Length: 2109 bp
atgataaaggtcttaaagacttataccgggccagcaaacatcgtcgggtcacatgccgtcacttcgaagaaaatcttgggtcatgtggcaggtttatctcgaagcttcttcttcaatccagaagcacctctcaatttagcccctggattttcagttccaatggcgaaacctgcagcaggaaacgcgaaccagaaccacggcggccggactgctgttcggattgttgtggcgggagaccgaagtaccggaaaatcgagcttgattgtaactgcggcggcggagaactttccggctaatgtgcctccgctgctgccgcctacaaggctgcctgaagatttctaccccgagcgcgtgcctatcacgattattgatacttcttctagaccagaggatagtggtaaagtagctgaagatctgaaggctgctgatgcagttgtgctaacttatgcatgtgatcagcctcagacgcttgaccggttgagtaacttttggcttccaaagcttcgtcagctagaggtaaaggtccctgttatagtggttggttgtaagctcgatttgagagatgagaatcaacaggtgagcctggagcaagtgatgtcgccaataatgcaacagtttcgggaaattgaaacctgcatcgagtgttcagcatataaacatattcagattcctgaggttttttactatgcacaaaaagctgttcttcacccaacagccccattattcgatcaggaaacacagactttgaaggaccaatgcgtgcgagccttgaagcggatattcattctctgtgatcatgatagggatggtgcccttagtgatgcagaattgaacgatttccaggttaaatgtttcaatgctccactacaaccttctgaaatagtgggcgtgaagagggttgtgcaagaaaagttaccggaaggagtcaatgaccgggggcttacactgacaggattcctcttcctgcatgcactatttatagagaagggacgtctagagacaacttggactgtactcaggaactttggctataacaacgatatacgactttcagaagaactaattccatcactcccaaaacggactcctgaccagagcatggagctgacaaatgaagcaatcgattttctgagtgcgaccttcaacttgtttgacaatgatggtgatggggccctaagaccacgtgaactggaagaactcttttcgactgctcctgcaagtccatttaatgaatttccatacaaggatgctgaagagagaaatgcatttggaggcctatcacttgatgggttcttgtcactgtgggccctcatgacactcctaaacccagcctctaccctggagaatcttatatacattggttatgccggtgatgtttcgtctgcaatccgtgtgactaggaaaaggcgtgttgatcgcaagaagcaacaatcagaacgaaatgttttccaatgcttcgtcttcggcccaaagaaggctgggaagtctgcattgttggattcttttcttggaaggccattttctgataactattatccaactaccgaggagcattatgcagttaatgttgttgatcagcctgggggaaccaagaaaatcctagtgttgagagagatttctgaagatggagttagcaaattactatctagtaaagaggctttggctgcttgtgacatagctgtgtttgttcatgacagttctgatgaattgtcctggaagaaagcaacagacttgcttatagaagtagctagtcatggtgagaatactggttttgaggtgccttgcctcattgttgcagctaaagatgatctggattcatttccattggccatacagcattctacaagggttagtcaggatatgggaacagaggctcctattcctattagcacaaagttgggtgattttaacaatgtatttcgtaaaattgtaagtgctgcagagcaccctcatttgagtattcccgagacagaggctggaaggagtcgcaagcaatatcacaggctcataaaccgctcgcttatgtttgtttcagtgggagctgcagtggccattgttggactggcagcgtaccgtgtctatgctgcgaggaagaatgcctccagttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000902 GO:0000904 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005741 GO:0006810 GO:0006839 GO:0006915 GO:0006928 GO:0006996 GO:0007005 GO:0007006 GO:0007017 GO:0007018 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008219 GO:0008637 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009826 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0010154 GO:0010970 GO:0012501 GO:0016020 GO:0016021 GO:0016043 GO:0016049 GO:0019725 GO:0019867 GO:0022414 GO:0023052 GO:0030154 GO:0030705 GO:0031090 GO:0031224 GO:0031300 GO:0031301 GO:0031306 GO:0031307 GO:0031966 GO:0031967 GO:0031968 GO:0031975 GO:0032501 GO:0032502 GO:0032592 GO:0032989 GO:0034643 GO:0035794 GO:0040007 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044444 GO:0044446 GO:0044455 GO:0044464 GO:0044706 GO:0046902 GO:0046907 GO:0047497 GO:0048316 GO:0048468 GO:0048588 GO:0048589 GO:0048608 GO:0048731 GO:0048856 GO:0048868 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0051646 GO:0051649 GO:0051654 GO:0051656 GO:0051704 GO:0051716 GO:0060560 GO:0061024 GO:0061458 GO:0065007 GO:0065008 GO:0071840 GO:0072384 GO:0090559 GO:0097190 GO:0097345 GO:0098573 GO:0098588 GO:0098805 GO:0099111 GO:1902108 GO:1902110 GO:1902686 GO:1905710
KEGG Pathways
Metabolic & Signaling
ko04137 ko04214 map04137 map04214
Pfam Domains
Protein Families
EF_assoc_1 EF_assoc_2 Ras

Protein Analysis

702

Amino Acids

77.51

Weight (kDa)

5.95

Isoelectric Point (pI)

45.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 994
Acc36I ACCTGC 3 cut(s) 80, 178, 641
AccB1I GGYRCC 2 cut(s) 809, 1777
AccB7I CCANNNNNTGG 1 cut(s) 1099
AccBSI CCGCTC 1 cut(s) 2016
AccII CGCG 2 cut(s) 185, 351
AciI CCGC 9 cut(s) 201, 230, 272, 275, 278, 305, 314, 775, 2014
AcoI YGGCCR 3 cut(s) 202, 1827, 2049
AcsI RAATTY 1 cut(s) 1232
AcuI CTGAAG 5 cut(s) 351, 429, 437, 1272, 1641
AcvI CACGTG 1 cut(s) 1184
AcyI GRCGYC 1 cut(s) 991
AfaI GTAC 3 cut(s) 244, 1014, 2072
AfiI CCNNNNNNNGG 4 cut(s) 176, 774, 1099, 1474
AgeI ACCGGT 1 cut(s) 474
AgsI TTSAA 7 cut(s) 115, 629, 748, 772, 832, 856, 1144
AjnI CCWGG 6 cut(s) 142, 582, 840, 1338, 1579, 1712
AjuI GAANNNNNNNTTGG 2 cut(s) 59, 91
AloI GAACNNNNNNTCC 4 cut(s) 138, 170, 1858, 1890
Alw21I GWGCWC 1 cut(s) 1947
Alw26I GTCTC 3 cut(s) 228, 992, 1961
AlwNI CAGNNNCTG 1 cut(s) 1976
Ama87I CYCGRG 2 cut(s) 344, 1964
AoxI GGCC 9 cut(s) 29, 202, 1170, 1273, 1305, 1465, 1514, 1827, 2049
ApaI GGGCCC 2 cut(s) 1174, 1309
ApoI RAATTY 1 cut(s) 1232
AsiGI ACCGGT 1 cut(s) 474
Asp700I GAANNNNTTC 2 cut(s) 836, 1062
AspLEI GCGC 1 cut(s) 351
AspS9I GGNCC 8 cut(s) 29, 523, 751, 1170, 1171, 1305, 1306, 1466
AsuC2I CCSGG 2 cut(s) 28, 935
AsuHPI GGTGA 6 cut(s) 589, 698, 1175, 1382, 1769, 1913
AsuII TTCGAA 1 cut(s) 65
AvaI CYCGRG 2 cut(s) 344, 1964
AvaII GGWCC 2 cut(s) 523, 751
AxyI CCTNAGG 1 cut(s) 672
BaeGI GKGCMC 3 cut(s) 814, 1174, 1309
BaeI ACNNNNGTAYC 2 cut(s) 226, 259
BalI TGGCCA 2 cut(s) 1829, 2051
BanI GGYRCC 2 cut(s) 809, 1777
BanII GRGCYC 2 cut(s) 1174, 1309
BbrPI CACGTG 1 cut(s) 1184
BbsI GAAGAC 1 cut(s) 1453
Bbv12I GWGCWC 1 cut(s) 1947
BccI CCATC 6 cut(s) 800, 1075, 1154, 1160, 1280, 1619
BceAI ACGGC 2 cut(s) 41, 214
BcgI CGANNNNNNTGC 2 cut(s) 599, 633
BciT130I CCWGG 6 cut(s) 144, 584, 842, 1340, 1581, 1714
BclI TGATCA 3 cut(s) 454, 793, 1573
BcnI CCSGG 2 cut(s) 28, 935
BcoDI GTCTC 3 cut(s) 228, 992, 1961
BfaI CTAG 7 cut(s) 381, 512, 995, 1398, 1601, 1647, 1749
BfmI CTRYAG 3 cut(s) 171, 1938, 2043
BfuAI ACCTGC 3 cut(s) 80, 178, 641
BglI GCCNNNNNGGC 1 cut(s) 322
BglII AGATCT 1 cut(s) 412
Bme1390I CCNGG 8 cut(s) 28, 144, 584, 842, 935, 1340, 1581, 1714
Bme18I GGWCC 2 cut(s) 523, 751
BmeT110I CYCGRG 2 cut(s) 344, 1964
BmgT120I GGNCC 8 cut(s) 29, 523, 751, 1170, 1171, 1305, 1306, 1466
BmiI GGNNCC 8 cut(s) 525, 811, 1171, 1172, 1307, 1588, 1779, 1875
BmrFI CCNGG 8 cut(s) 28, 144, 584, 842, 935, 1340, 1581, 1714
BmsI GCATC 4 cut(s) 418, 645, 811, 1237
BpiI GAAGAC 1 cut(s) 1453
BpmI CTGGAG 3 cut(s) 605, 1361, 2086
Bpu14I TTCGAA 1 cut(s) 65
BpuMI CCSGG 2 cut(s) 28, 935
Bsa29I ATCGAT 1 cut(s) 1122
BsaAI YACGTR 1 cut(s) 1184
BsaBI GATNNNNATC 1 cut(s) 567
BsaHI GRCGYC 1 cut(s) 991
BsaI GGTCTC 1 cut(s) 228
BsaJI CCNNGG 6 cut(s) 142, 196, 934, 1338, 1545, 1580
BsaWI WCCGGW 3 cut(s) 245, 474, 916
BsaXI ACNNNNNCTCC 4 cut(s) 1858, 1888, 2031, 2061
Bsc4I CCNNNNNNNGG 4 cut(s) 176, 774, 1099, 1474
Bse118I RCCGGY 2 cut(s) 474, 1367
Bse1I ACTGG 4 cut(s) 1194, 1771, 2067, 2103
Bse21I CCTNAGG 1 cut(s) 672
Bse8I GATNNNNATC 1 cut(s) 567
BseBI CCWGG 6 cut(s) 144, 584, 842, 1340, 1581, 1714
BseCI ATCGAT 1 cut(s) 1122
BseDI CCNNGG 6 cut(s) 142, 196, 934, 1338, 1545, 1580
BseGI GGATG 2 cut(s) 811, 1252
BseJI GATNNNNATC 1 cut(s) 567
BseLI CCNNNNNNNGG 4 cut(s) 176, 774, 1099, 1474
BseMII CTCAG 4 cut(s) 476, 663, 1030, 1121
BseNI ACTGG 4 cut(s) 1194, 1771, 2067, 2103
BseRI GAGGAG 1 cut(s) 1562
BseSI GKGCMC 3 cut(s) 814, 1174, 1309
BseX3I CGGCCG 1 cut(s) 202
BseYI CCCAGC 2 cut(s) 1327, 1478
Bsh1236I CGCG 2 cut(s) 185, 351
Bsh1285I CGRYCG 1 cut(s) 205
BshFI GGCC 9 cut(s) 31, 204, 1172, 1275, 1307, 1467, 1516, 1829, 2051
BshNI GGYRCC 2 cut(s) 809, 1777
BshTI ACCGGT 1 cut(s) 474
BshVI ATCGAT 1 cut(s) 1122
BsiEI CGRYCG 1 cut(s) 205
BsiHKAI GWGCWC 1 cut(s) 1947
BsiHKCI CYCGRG 2 cut(s) 344, 1964
BsiSI CCGG 8 cut(s) 27, 205, 246, 290, 475, 917, 934, 1368
BslFI GGGAC 2 cut(s) 509, 1002
BslI CCNNNNNNNGG 4 cut(s) 176, 774, 1099, 1474
BsmAI GTCTC 3 cut(s) 228, 992, 1961
BsmFI GGGAC 2 cut(s) 509, 1002
BsmI GAATGC 2 cut(s) 1837, 2101
BsnI GGCC 9 cut(s) 31, 204, 1172, 1275, 1307, 1467, 1516, 1829, 2051
Bso31I GGTCTC 1 cut(s) 228
BsoBI CYCGRG 2 cut(s) 344, 1964
Bsp119I TTCGAA 1 cut(s) 65
Bsp120I GGGCCC 2 cut(s) 1170, 1305
Bsp1286I GDGCHC 4 cut(s) 814, 1174, 1309, 1947
Bsp143I GATC 7 cut(s) 412, 454, 727, 793, 1414, 1573, 1807
BspACI CCGC 9 cut(s) 201, 230, 272, 275, 278, 305, 314, 775, 2014
BspANI GGCC 9 cut(s) 31, 204, 1172, 1275, 1307, 1467, 1516, 1829, 2051
BspCNI CTCAG 4 cut(s) 475, 664, 1029, 1122
BspDI ATCGAT 1 cut(s) 1122
BspFNI CGCG 2 cut(s) 185, 351
BspHI TCATGA 3 cut(s) 796, 1311, 1690
BspLI GGNNCC 8 cut(s) 525, 811, 1171, 1172, 1307, 1588, 1779, 1875
BspMAI CTGCAG 3 cut(s) 175, 1942, 2047
BspMI ACCTGC 3 cut(s) 80, 178, 641
BspT104I TTCGAA 1 cut(s) 65
BspT107I GGYRCC 2 cut(s) 809, 1777
BspTNI GGTCTC 1 cut(s) 228
BsrBI CCGCTC 1 cut(s) 2016
BsrFI RCCGGY 2 cut(s) 474, 1367
BsrI ACTGG 4 cut(s) 1194, 1771, 2067, 2103
BssAI RCCGGY 2 cut(s) 474, 1367
BssECI CCNNGG 6 cut(s) 142, 196, 934, 1338, 1545, 1580
BssMI GATC 7 cut(s) 412, 454, 727, 793, 1414, 1573, 1807
BssNI GRCGYC 1 cut(s) 991
Bst2UI CCWGG 6 cut(s) 144, 584, 842, 1340, 1581, 1714
Bst4CI ACNGT 5 cut(s) 615, 1012, 1302, 1697, 2075
Bst6I CTCTTC 3 cut(s) 887, 965, 1248
BstACI GRCGYC 1 cut(s) 991
BstBAI YACGTR 1 cut(s) 1184
BstBI TTCGAA 1 cut(s) 65
BstC8I GCNNGC 7 cut(s) 33, 353, 761, 765, 969, 1991, 2018
BstDEI CTNAG 6 cut(s) 462, 672, 815, 1016, 1130, 1175
BstDSI CCRYGG 1 cut(s) 196
BstENI CCTNNNNNAGG 1 cut(s) 174
BstF5I GGATG 2 cut(s) 811, 1252
BstFNI CGCG 2 cut(s) 185, 351
BstHHI GCGC 1 cut(s) 351
BstKTI GATC 7 cut(s) 415, 457, 730, 796, 1417, 1576, 1810
BstMAI GTCTC 3 cut(s) 228, 992, 1961
BstMBI GATC 7 cut(s) 412, 454, 727, 793, 1414, 1573, 1807
BstMCI CGRYCG 1 cut(s) 205
BstNI CCWGG 6 cut(s) 144, 584, 842, 1340, 1581, 1714
BstNSI RCATGY 3 cut(s) 56, 453, 971
BstSCI CCNGG 8 cut(s) 26, 142, 582, 840, 933, 1338, 1579, 1712
BstSFI CTRYAG 3 cut(s) 171, 1938, 2043
BstSLI GKGCMC 3 cut(s) 814, 1174, 1309
BstUI CGCG 2 cut(s) 185, 351
BstV2I GAAGAC 1 cut(s) 1453
BstX2I RGATCY 1 cut(s) 412
BstYI RGATCY 1 cut(s) 412
BstZI CGGCCG 1 cut(s) 202
Bsu15I ATCGAT 1 cut(s) 1122
Bsu36I CCTNAGG 1 cut(s) 672
BsuRI GGCC 9 cut(s) 31, 204, 1172, 1275, 1307, 1467, 1516, 1829, 2051
BsuTUI ATCGAT 1 cut(s) 1122
BtgI CCRYGG 1 cut(s) 196
BtsCI GGATG 2 cut(s) 811, 1252
BtsI GCAGTG 1 cut(s) 2052
BtsIMutI CAGTG 4 cut(s) 944, 1298, 2040, 2052
BveI ACCTGC 3 cut(s) 80, 178, 641
Cac8I GCNNGC 7 cut(s) 33, 353, 761, 765, 969, 1991, 2018
CaiI CAGNNNCTG 1 cut(s) 1976
CciI TCATGA 3 cut(s) 796, 1311, 1690
CfoI GCGC 1 cut(s) 351
Cfr10I RCCGGY 2 cut(s) 474, 1367
Cfr13I GGNCC 8 cut(s) 29, 523, 751, 1170, 1171, 1305, 1306, 1466
ClaI ATCGAT 1 cut(s) 1122
CseI GACGC 1 cut(s) 475
Csp6I GTAC 3 cut(s) 243, 1013, 2071
CspAI ACCGGT 1 cut(s) 474
CviAII CATG 9 cut(s) 53, 83, 450, 797, 968, 1099, 1312, 1691, 1754
CviQI GTAC 3 cut(s) 243, 1013, 2071
DdeI CTNAG 6 cut(s) 462, 672, 815, 1016, 1130, 1175
DpnI GATC 7 cut(s) 414, 456, 729, 795, 1416, 1575, 1809
DpnII GATC 7 cut(s) 412, 454, 727, 793, 1414, 1573, 1807
EaeI YGGCCR 3 cut(s) 202, 1827, 2049
EagI CGGCCG 1 cut(s) 202
Eam1104I CTCTTC 3 cut(s) 887, 965, 1248
EarI CTCTTC 3 cut(s) 887, 965, 1248
EciI GGCGGA 1 cut(s) 293
EclXI CGGCCG 1 cut(s) 202
Eco147I AGGCCT 1 cut(s) 1275
Eco24I GRGCYC 2 cut(s) 1174, 1309
Eco31I GGTCTC 1 cut(s) 228
Eco47I GGWCC 2 cut(s) 523, 751
Eco52I CGGCCG 1 cut(s) 202
Eco57I CTGAAG 5 cut(s) 351, 429, 437, 1272, 1641
Eco72I CACGTG 1 cut(s) 1184
Eco81I CCTNAGG 1 cut(s) 672
Eco88I CYCGRG 2 cut(s) 344, 1964
EcoNI CCTNNNNNAGG 1 cut(s) 174
EcoO109I RGGNCCY 4 cut(s) 523, 1170, 1171, 1306
EcoRII CCWGG 6 cut(s) 142, 582, 840, 1338, 1579, 1712
EcoT22I ATGCAT 2 cut(s) 451, 1267
EcoT38I GRGCYC 2 cut(s) 1174, 1309
FaeI CATG 9 cut(s) 56, 86, 453, 800, 971, 1102, 1315, 1694, 1757
FalI AAGNNNNNCTT 4 cut(s) 59, 91, 687, 719
FaqI GGGAC 2 cut(s) 509, 1002
FatI CATG 9 cut(s) 52, 82, 449, 796, 967, 1098, 1311, 1690, 1753
FauI CCCGC 1 cut(s) 223
FbaI TGATCA 3 cut(s) 454, 793, 1573
FokI GGATG 2 cut(s) 818, 1259
FriOI GRGCYC 2 cut(s) 1174, 1309
FspBI CTAG 7 cut(s) 381, 512, 995, 1398, 1601, 1647, 1749
GlaI GCGC 1 cut(s) 350
GsaI CCCAGC 2 cut(s) 1331, 1482
GsuI CTGGAG 3 cut(s) 605, 1361, 2086
HaeIII GGCC 9 cut(s) 31, 204, 1172, 1275, 1307, 1467, 1516, 1829, 2051
HapII CCGG 8 cut(s) 27, 205, 246, 290, 475, 917, 934, 1368
HgaI GACGC 1 cut(s) 475
HhaI GCGC 1 cut(s) 351
Hin1I GRCGYC 1 cut(s) 991
Hin1II CATG 9 cut(s) 56, 86, 453, 800, 971, 1102, 1315, 1694, 1757
Hin6I GCGC 1 cut(s) 349
HinP1I GCGC 1 cut(s) 349
HindIII AAGCTT 2 cut(s) 103, 500
HinfI GANTC 9 cut(s) 568, 667, 924, 954, 1084, 1345, 1499, 1814, 1984
HpaII CCGG 8 cut(s) 27, 205, 246, 290, 475, 917, 934, 1368
HphI GGTGA 6 cut(s) 589, 698, 1175, 1382, 1769, 1913
Hpy166II GTNNAC 1 cut(s) 1187
Hpy8I GTNNAC 1 cut(s) 1187
Hpy99I CGWCG 1 cut(s) 47
HpyAV CCTTC 9 cut(s) 412, 742, 882, 914, 979, 1150, 1468, 1506, 1974
HpyCH4III ACNGT 5 cut(s) 615, 1012, 1302, 1697, 2075
HpyCH4IV ACGT 2 cut(s) 991, 1183
HpyF3I CTNAG 6 cut(s) 462, 672, 815, 1016, 1130, 1175
HpySE526I ACGT 2 cut(s) 991, 1183
Hsp92I GRCGYC 1 cut(s) 991
Hsp92II CATG 9 cut(s) 56, 86, 453, 800, 971, 1102, 1315, 1694, 1757
HspAI GCGC 1 cut(s) 349
Ksp22I TGATCA 3 cut(s) 454, 793, 1573
Kzo9I GATC 7 cut(s) 412, 454, 727, 793, 1414, 1573, 1807
LmnI GCTCC 7 cut(s) 586, 865, 1102, 1216, 1549, 1879, 2039
LweI GCATC 4 cut(s) 418, 645, 811, 1237
MaeI CTAG 7 cut(s) 381, 512, 995, 1398, 1601, 1647, 1749
MaeII ACGT 2 cut(s) 991, 1183
MaeIII GTNAC 8 cut(s) 48, 58, 265, 482, 912, 1296, 1393, 1670
MalI GATC 7 cut(s) 414, 456, 729, 795, 1416, 1575, 1809
MbiI CCGCTC 1 cut(s) 2016
MboI GATC 7 cut(s) 412, 454, 727, 793, 1414, 1573, 1807
MflI RGATCY 1 cut(s) 412
MhlI GDGCHC 4 cut(s) 814, 1174, 1309, 1947
MlsI TGGCCA 2 cut(s) 1829, 2051
MluCI AATT 8 cut(s) 133, 624, 827, 1062, 1232, 1637, 1706, 1926
MluNI TGGCCA 2 cut(s) 1829, 2051
MlyI GAGTC 3 cut(s) 933, 1078, 1993
MmeI TCCRAC 3 cut(s) 1476, 1562, 2038
Mox20I TGGCCA 2 cut(s) 1829, 2051
Mph1103I ATGCAT 2 cut(s) 451, 1267
MroXI GAANNNNTTC 2 cut(s) 836, 1062
MscI TGGCCA 2 cut(s) 1829, 2051
MseI TTAA 6 cut(s) 14, 846, 1227, 1563, 1908, 2107
MslI CAYNNNNRTG 1 cut(s) 1679
Msp20I TGGCCA 2 cut(s) 1829, 2051
MspA1I CMGCKG 1 cut(s) 307
MspI CCGG 8 cut(s) 27, 205, 246, 290, 475, 917, 934, 1368
MspR9I CCNGG 8 cut(s) 28, 144, 584, 842, 935, 1340, 1581, 1714
Mva1269I GAATGC 2 cut(s) 1837, 2101
MvaI CCWGG 6 cut(s) 144, 584, 842, 1340, 1581, 1714
MvnI CGCG 2 cut(s) 185, 351
NciI CCSGG 2 cut(s) 28, 935
NdeII GATC 7 cut(s) 412, 454, 727, 793, 1414, 1573, 1807
NlaIII CATG 9 cut(s) 56, 86, 453, 800, 971, 1102, 1315, 1694, 1757
NlaIV GGNNCC 8 cut(s) 525, 811, 1171, 1172, 1307, 1588, 1779, 1875
NmuCI GTSAC 5 cut(s) 48, 58, 1296, 1393, 1670
NsiI ATGCAT 2 cut(s) 451, 1267
NspI RCATGY 3 cut(s) 56, 453, 971
NspV TTCGAA 1 cut(s) 65
PaeI GCATGC 1 cut(s) 971
PagI TCATGA 3 cut(s) 796, 1311, 1690
PceI AGGCCT 1 cut(s) 1275
PctI GAATGC 2 cut(s) 1837, 2101
PdmI GAANNNNTTC 2 cut(s) 836, 1062
PfeI GAWTC 6 cut(s) 568, 667, 954, 1345, 1499, 1814
PflMI CCANNNNNTGG 1 cut(s) 1099
PfoI TCCNGGA 1 cut(s) 1712
PinAI ACCGGT 1 cut(s) 474
PleI GAGTC 3 cut(s) 932, 1078, 1992
PmaCI CACGTG 1 cut(s) 1184
PmlI CACGTG 1 cut(s) 1184
PpsI GAGTC 3 cut(s) 932, 1078, 1992
Ppu21I YACGTR 1 cut(s) 1184
PpuMI RGGWCCY 1 cut(s) 523
Psp5II RGGWCCY 1 cut(s) 523
Psp6I CCWGG 6 cut(s) 142, 582, 840, 1338, 1579, 1712
PspCI CACGTG 1 cut(s) 1184
PspFI CCCAGC 2 cut(s) 1327, 1478
PspGI CCWGG 6 cut(s) 142, 582, 840, 1338, 1579, 1712
PspN4I GGNNCC 8 cut(s) 525, 811, 1171, 1172, 1307, 1588, 1779, 1875
PspOMI GGGCCC 2 cut(s) 1170, 1305
PspPI GGNCC 8 cut(s) 29, 523, 751, 1170, 1171, 1305, 1306, 1466
PspPPI RGGWCCY 1 cut(s) 523
PstI CTGCAG 3 cut(s) 175, 1942, 2047
PstNI CAGNNNCTG 1 cut(s) 1976
PsuI RGATCY 1 cut(s) 412
RsaI GTAC 3 cut(s) 244, 1014, 2072
RsaNI GTAC 3 cut(s) 243, 1013, 2071
RseI CAYNNNNRTG 1 cut(s) 1679
SaqAI TTAA 6 cut(s) 14, 846, 1227, 1563, 1908, 2107
Sau3AI GATC 7 cut(s) 412, 454, 727, 793, 1414, 1573, 1807
Sau96I GGNCC 8 cut(s) 29, 523, 751, 1170, 1171, 1305, 1306, 1466
SchI GAGTC 3 cut(s) 933, 1078, 1993
ScrFI CCNGG 8 cut(s) 28, 144, 584, 842, 935, 1340, 1581, 1714
SduI GDGCHC 4 cut(s) 814, 1174, 1309, 1947
SfaNI GCATC 4 cut(s) 418, 645, 811, 1237
SfcI CTRYAG 3 cut(s) 171, 1938, 2043
SfuI TTCGAA 1 cut(s) 65
SinI GGWCC 2 cut(s) 523, 751
SmiMI CAYNNNNRTG 1 cut(s) 1679
SphI GCATGC 1 cut(s) 971
Sse9I AATT 8 cut(s) 133, 624, 827, 1062, 1232, 1637, 1706, 1926
SseBI AGGCCT 1 cut(s) 1275
SsiI CCGC 9 cut(s) 201, 230, 272, 275, 278, 305, 314, 775, 2014
SspMI CTAG 7 cut(s) 381, 512, 995, 1398, 1601, 1647, 1749
StuI AGGCCT 1 cut(s) 1275
StyD4I CCNGG 8 cut(s) 26, 142, 582, 840, 933, 1338, 1579, 1712
TaaI ACNGT 5 cut(s) 615, 1012, 1302, 1697, 2075
TaiI ACGT 2 cut(s) 994, 1186
TaqI TCGA 8 cut(s) 65, 100, 254, 552, 639, 726, 1122, 1205
TaqII GACCGA 1 cut(s) 252
TasI AATT 8 cut(s) 133, 624, 827, 1062, 1232, 1637, 1706, 1926
TatI WGTACW 1 cut(s) 1012
TauI GCSGC 4 cut(s) 204, 275, 278, 316
TfiI GAWTC 6 cut(s) 568, 667, 954, 1345, 1499, 1814
Tru1I TTAA 6 cut(s) 14, 846, 1227, 1563, 1908, 2107
Tru9I TTAA 6 cut(s) 14, 846, 1227, 1563, 1908, 2107
TscAI CASTG 4 cut(s) 951, 1305, 2040, 2052
TseFI GTSAC 5 cut(s) 48, 58, 1296, 1393, 1670
Tsp45I GTSAC 5 cut(s) 48, 58, 1296, 1393, 1670
TspDTI ATGAA 6 cut(s) 772, 1128, 1245, 1679, 1719, 1806
TspGWI ACGGA 2 cut(s) 1096, 1379
TspRI CASTG 4 cut(s) 951, 1305, 2040, 2052
Van91I CCANNNNNTGG 1 cut(s) 1099
VpaK11BI GGWCC 2 cut(s) 523, 751
XagI CCTNNNNNAGG 1 cut(s) 174
XapI RAATTY 1 cut(s) 1232
XbaI TCTAGA 2 cut(s) 380, 994
XceI RCATGY 3 cut(s) 56, 453, 971
XcmI CCANNNNNNNNNTGG 1 cut(s) 2059
XmnI GAANNNNTTC 2 cut(s) 836, 1062
XspI CTAG 7 cut(s) 381, 512, 995, 1398, 1601, 1647, 1749
ZraI GACGTC 1 cut(s) 992
Zsp2I ATGCAT 2 cut(s) 451, 1267
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.