Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0013415

Physical Location & Seq

Genomic Coordinates Reverse (-)

10359936 .. 10366241

Gene Structure 6306 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g16450.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4065 bp

ATGCAAATGTCACAAGATTCTCAGGGGATAAAGACCATTGAGCAGTGGAGATGGTCAGATATGCAAGGCCTTGAGCTTGTGACTGACCCTCCTCCCTCTTCTTCTGACCCATCTAAAACCAACCCAACAACAACAACAACAACAACTACAACAAGTGCTAAGGAATCCAGACAAGCTCAAGCAATGGAGAGCTCTGCTGAGCCAACAACAAAGCAGGACTCTAATGACAGCGGTGGGGGAGGTGAGAAGCCTGAGGCTGTTCCAACAGTTGGCTTTGGACAAGTTTTCAGATTCGCTGATGGGTTGGATTACGTTCTGATGGGGATTGGGTCTGTTGGCGCAATCGTGCATGGTTGTTCTTTGCCAATCTTTCTTCGTTTCTTTGCTGATCTTGTCAATTCTTTCGGCGCAAATGCCGATCACCCGGACAAGATGATGCAGGAGGTTTTGAAGTATGCATTGTACTTTCTTGTTGTGGGAGCTGCAATATGGGCTTCTTCATGGGCAGAGATATCGTGTTGGATGTGGACCGGAGAAAGGCAATCGACCAAGATGAGGATCAAGTACCTTGAAGCTGCTTTGAGCCAGGACATTCAGTTTTTCGATACAGAGGTTCGAACCTCCGATGTCGTTTTTGCCATCAACACTGATGCTGTGATTGTCCAGGACGCCATTAGTGAGAAGTTGGGGAATTTCATTCACTACATGGCAACATTTGTGTCTGGATTTGTGGTGGGTTTCACTGCAGTGTGGCAATTAGCTCTTGTGACTCTAGCAGTAGTGCCTCTGATTGCTGTGATAGGAGCCATTCACATGTCCACATTAGCCAAACTCTCCGGGAAGAGCCAAGAGGCTCTTTCACAAGCAGGACACACTGTAGAACAGACTGTAGTTCAAATTCGAGTTGTCATGTCTTACGTCGGGGAATCGAGAGCACTAGAAGCATACTCCTCAGCATTAAGAATTGCCCAGAGGCTTGGTTACAAGAGTGGATTTGCTAAAGGAATGGGACTTGGAGCAACTTACTTTGTTGTTTTCTGCTGTTATGCACTTCTTTTATGGTATGGGGGTTATCTTGTTAGGCACCATTTCACCAATGGAGGTCTTGCTATATCTACCATGTTTTCGGTCATGATAGGTGGACTGGCTTTGGGACAATCTGCTCCAAGCATGGGCGCGTTTGCAAAGGCTAAAGTTGCAGCTGCCAAGATATTTCGGATTATTGACCACAAGCCTGGCATGGACCGAAATAGTGAAGCAGGGGTAGAATTGCAGTCTGTTACAGGACTAGTGGAGCTGAAAAATGTGGATTTCTCCTACCCATCAAGGCAGGATGTTCGAATTCTCAACAATTTCTCTTTGAATGTTCCAGCCGGAAAGACCATAGCTTTGGTTGGTAGCAGTGGCTCTGGTAAGAGCACTGTGGTCTCCCTCATTGAGAGATTTTATGACCCTTCCTCAGGACAAGTTCTGCTAGATGGACATGACATAAAGACATTGAAATTAAAGTGGCTAAGGCAGCAGATAGGGCTTGTTAGCCAAGAGCCTGCTCTGTTTGCTACAACCATTAAAGAGAATATACTTTTGGGGAGGCCTGATGCAGACCAAGTTGAGATTGAAGAAGCTGCCAGAGTTGCCAATGCCCATTCGTTCATTGTCAAACTTCCTGATGGCTTTGATACTCAGGTAGGGGAGAGAGGAGTCCAACTGTCTGGAGGACAAAAGCAGAGGATAGCCATAGCAAGGGCCATGCTTAAAAACCCAGCAATCCTTCTGTTAGATGAGGCAACAAGTGCACTGGACTCTGAGTCAGAAAAGCTGGTACAAGAAGCCCTGGACCGGTTTATGATAGGCAGGACAACTCTTGTCATTGCTCACCGTCTCTCAACCATTCGCAAGGCTGACCTTGTAGCTGTACTCCAGCAGGGAAGTGTTTCTGAAATTGGAACCCATGATGAACTCTTTTCTAAAGGAGAGAATGGTGTTTATGCCAAGCTTATTCGAATGCAAGAGGCAGCTCATGAAACCGCTCTCAACAATGCCAGAAAGAGTAGTGCTAGGCCTTCTAGTGCAAGAAACTCTGTTAGCTCACCAATTATCACCCGAAATTCTTCATACGGTCGATCACCATACTCACGCAGGCTCTCTGACTTTTCTACTTCTGATTTTAGTCTCTCCCTTGATGCCACACACCCCAATTACCGTCTAGAAAAGCTTGCCTTCAAGGAGCAAGCCAGTTCCTTCTGGCGCCTTGCCAAGATGAACTCTCCTGAATGGGTCTATGCATTAGTTGGTTCAATTGGCTCTGTTGTTTGTGGTTCTCTGAGTGCTTTCTTTGCATATGTTCTAAGTGCAGTCCTCAGTGTCTACTACAATCCAGACCATGATTACATGATCAAGCAAATTAATAAGTACTGCTATTTGTTAATTGGACTTTCATCAGCTGCACTACTCTTCAACACGCTACAACATTCTTTCTGGGATATCGTGGGAGAGAATCTTACAAAACGCGTGAGGGAGAAAATGCTGGCAGCAGTGTTAAAAAATGAAATGGCATGGTTTGATCAGGAGGAAAATGAGAGTGGCAGGATTGCAGCAAGGCTGGCTCTTGATGCCAACAATGTCAGATCAGCCATTGGGGACAGGATTTCTGTTATTGTACAGAACACAGCACTCATGCTTGTTGCTTGCACTGCAGGATTTGTTTTGCAATGGCGCCTTGCCCTTGTCCTCGTAGCTGTCTTCCCTGTTGTTGTTGCAGCCACAGTTTTGCAGAAAATGTTCATGACCGGTTTCTCGGGAGACCTTGAAGCTGCTCATGCCAAGGCCACCCAACTAGCTGGGGAGGCCATAGCCAATGTAAGGACGGTTGCTGCATTCAACTCCGAGGGAAAGATTGTTGGTCTCTTTTCCTCCAACCTGCAGATTCCCCTGCGTCGGTGTTTTTGGAAGGGTCAGATTGCTGGAAGTGGATTTGGGGTTGCTCAGTTTGCACTCTATGGTTCCTATGCTCTCGGTCTTTGGTACGCTTCCTGGCTTGTAAAGCATGGAATCTCTGATTTCTCAAAGGCGATCCGAGTTTTTATGGTCCTCATGGTATCCGCTAACGGTGCAGCAGAGACACTAACCTTGGCTCCTGATTTTATTAAGGGTGGTCAAGCCATGCAATCAGTTTTTGAGCTACTTGACCGCAAGACTGAAATTGAACCTGATGATATTGATGCTACTGCAGTGCCTGATCGCCTGCGTGGAGAAGTTGAGTTTAAGCATGTAGACTTTTCGTATCCTTCTCGACCTGATGTTCCTGTGTTTCGTGATCTCTCCCTTCGTGCCCGAGCAGGCAAGACTCTTGCTCTTGTTGGTCCTAGTGGGTGCGGAAAGAGCTCAGTCATTTCATTAGTACAGAGATTTTATGATCCAACATCAGGAAGAGTTATTATTGATGGAAAGGATATTCGCAAATACAATCTCAAGTCTCTGAGAAGGCACATTGCTGTGGTTCCTCAGGAGCCATGCCTCTTTGCTACAACTATATATGAAAATATCGCTTATGGACATGAGTCAGCAACTGAAGCTGAGATCATTGAAGCTGCTAATCTAGCCAATGCTCACAAGTTCGTATCTGCATTGCCGGAAGGCTACAAAACGTTTGTCGGGGAGAGGGGAATACAATTATCTGGAGGACAGAAACAAAGGATTGCTATTGCCAGGGCTTTACTGAGGAAGGCAGAGCTTATGCTTCTCGATGAAGCAACAAGTGCACTTGATGCTGAGTCCGAGAGATCTATTCAAGAAGCTCTAGAGCGCGCATGTTCGGGAAAAACCACAATTGTGGTTGCACACAGACTATCAACTATTAGAAATGCCAATGTCATTGCAGTCATTGATGATGGGAAAGTGGCAGAGCAAGGATCACACAACCATCTATTGAAAAACTACCCGGATGGGTGTTACGCACGCATGATACAGCTACAAAGGTTTTCACACAGCCAGGCCATTGGAATAGCATCAGGTTCAAGTTCTTCAGTAAGACCAAGGGAAGATGAAGAAAGAGAAGGCAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006810 GO:0007275 GO:0008150 GO:0008361 GO:0009314 GO:0009411 GO:0009416 GO:0009506 GO:0009605 GO:0009606 GO:0009607 GO:0009624 GO:0009628 GO:0009629 GO:0009630 GO:0009637 GO:0009639 GO:0009640 GO:0009719 GO:0009725 GO:0009733 GO:0009791 GO:0009908 GO:0009914 GO:0009926 GO:0009958 GO:0009966 GO:0009987 GO:0010033 GO:0010315 GO:0010328 GO:0010329 GO:0010646 GO:0010817 GO:0010928 GO:0015399 GO:0015405 GO:0015562 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022414 GO:0022804 GO:0022857 GO:0023051 GO:0030054 GO:0032501 GO:0032502 GO:0032535 GO:0042221 GO:0042623 GO:0042626 GO:0043207 GO:0043473 GO:0043476 GO:0043478 GO:0043479 GO:0043480 GO:0043481 GO:0043492 GO:0044464 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048583 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055044 GO:0055085 GO:0060918 GO:0060919 GO:0061458 GO:0065007 GO:0065008 GO:0071840 GO:0071944 GO:0080161 GO:0090066 GO:0090567 GO:0099402

KEGG Pathways

Metabolic & Signaling

ko02010 ko04976 ko05206 ko05226 map02010 map04976 map05206 map05226

Pfam Domains

Protein Families

ABC_membrane ABC_tran

Protein Analysis

1355

Amino Acids

147.53

Weight (kDa)

7.85

Isoelectric Point (pI)

38.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_membrane	PF00664	2 - 206	1.8e-42	ABC transporter transmembrane region
ABC_tran	PF00005	275 - 424	2.8e-35	ABC transporter
ABC_membrane	PF00664	593 - 859	7.4e-53	ABC transporter transmembrane region
ABC_tran	PF00005	931 - 1079	2e-34	ABC transporter
SMC_N	PF02463	967 - 1119	4e-06	RecF/RecN/SMC N terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013415)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G36910
fragaria_vesca	FvH4_6g16450 FvH4_6g16450 FvH4_6g16450
malus_domestica	MD04G1092800.v1.1
prunus_persica	Prupe.7G129600_v2.0.a1
pyrus_communis	pycom04g08730 pycom04g08740 pycom12g11150
rosa_chinensis	RchiOBHm_Chr3g0470311
rosa_laevigata	RLG00000024279
rosa_multiflora	Rmu_sc0001093.1_g000001
rosa_roxburghii	Rroxscaffold_6G00410950
rosa_rugosa	Rorug03G0108000
rosa_samantha	Rh3AG157800 Rh3BG182100 Rh3DG192800
rosa_wichuraiana	Rw3G015010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	2928
AccB1I	GGYRCC	3 cut(s)	1083, 2247, 2715
AccB7I	CCANNNNNTGG	1 cut(s)	269
AccBSI	CCGCTC	1 cut(s)	2030
AccI	GTMKAC	2 cut(s)	2367, 3273
AccII	CGCG	3 cut(s)	1178, 2511, 3807
AciI	CCGC	5 cut(s)	231, 2028, 3102, 3190, 3375
AclI	AACGTT	1 cut(s)	3647
AclWI	GGATC	4 cut(s)	566, 3067, 3410, 3919
AcsI	RAATTY	4 cut(s)	691, 897, 1341, 2107
AcuI	CTGAAG	2 cut(s)	3591, 4008
AcyI	GRCGYC	3 cut(s)	669, 2248, 2716
AfaI	GTAC	8 cut(s)	464, 566, 1824, 1917, 2414, 2661, 3026, 3402
AflIII	ACRYGT	2 cut(s)	813, 2509
AgeI	ACCGGT	2 cut(s)	1839, 2789
AhdI	GACNNNNNGTC	1 cut(s)	1807
AhlI	ACTAGT	1 cut(s)	1288
AjnI	CCWGG	7 cut(s)	585, 663, 1234, 1833, 3032, 3707, 3990
AjuI	GAANNNNNNNTTGG	2 cut(s)	1568, 1600
AleI	CACNNNNGTG	2 cut(s)	746, 3830
Alw21I	GWGCWC	6 cut(s)	194, 937, 1421, 1798, 3386, 3763
Alw26I	GTCTC	7 cut(s)	1432, 1886, 2177, 2796, 2909, 3113, 3480
Alw44I	GTGCAC	2 cut(s)	1794, 3759
AlwI	GGATC	4 cut(s)	566, 3067, 3410, 3919
AlwNI	CAGNNNCTG	2 cut(s)	3236, 3569
Ama87I	CYCGRG	2 cut(s)	2797, 3333
AoxI	GGCC	7 cut(s)	67, 1592, 1746, 2060, 2826, 2847, 3993
ApaLI	GTGCAC	2 cut(s)	1794, 3759
ApoI	RAATTY	4 cut(s)	691, 897, 1341, 2107
ArsI	GACNNNNNNTTYG	4 cut(s)	1372, 1404, 3636, 3668
AseI	ATTAAT	1 cut(s)	2406
AsiGI	ACCGGT	2 cut(s)	1839, 2789
Asp700I	GAANNNNTTC	3 cut(s)	1933, 2110, 2780
AspLEI	GCGC	7 cut(s)	341, 410, 1178, 2250, 2718, 3807, 3809
AspS9I	GGNCC	6 cut(s)	528, 1243, 1746, 1837, 3088, 3362
AsuC2I	CCSGG	3 cut(s)	425, 838, 3941
AsuHPI	GGTGA	7 cut(s)	254, 413, 1084, 1868, 2082, 2092, 2118
AsuII	TTCGAA	3 cut(s)	616, 1339, 2002
AvaI	CYCGRG	2 cut(s)	2797, 3333
AvaII	GGWCC	5 cut(s)	528, 1243, 1837, 3088, 3362
AxyI	CCTNAGG	3 cut(s)	252, 1459, 3504
BaeGI	GKGCMC	3 cut(s)	1798, 3334, 3763
BaeI	ACNNNNGTAYC	4 cut(s)	597, 630, 1671, 1704
BanI	GGYRCC	3 cut(s)	1083, 2247, 2715
BanII	GRGCYC	2 cut(s)	194, 3386
BbsI	GAAGAC	1 cut(s)	2734
Bbv12I	GWGCWC	6 cut(s)	194, 937, 1421, 1798, 3386, 3763
BbvCI	CCTCAGC	1 cut(s)	952
BcgI	CGANNNNNNTGC	4 cut(s)	495, 529, 1319, 1353
BciT130I	CCWGG	7 cut(s)	587, 665, 1236, 1835, 3034, 3709, 3992
BciVI	GTATCC	2 cut(s)	3109, 3294
BclI	TGATCA	2 cut(s)	2394, 2563
BcnI	CCSGG	3 cut(s)	425, 838, 3941
BcoDI	GTCTC	7 cut(s)	1432, 1886, 2177, 2796, 2909, 3113, 3480
BcuI	ACTAGT	1 cut(s)	1288
BfmI	CTRYAG	6 cut(s)	744, 876, 888, 2694, 2921, 3228
BfoI	RGCGCY	2 cut(s)	2251, 2719
BfuAI	ACCTGC	1 cut(s)	2928
BfuI	GTATCC	2 cut(s)	3109, 3294
BglII	AGATCT	1 cut(s)	3782
BlpI	GCTNAGC	1 cut(s)	198
BmcAI	AGTACT	1 cut(s)	2414
Bme18I	GGWCC	5 cut(s)	528, 1243, 1837, 3088, 3362
BmeRI	GACNNNNNGTC	1 cut(s)	1807
BmeT110I	CYCGRG	2 cut(s)	2797, 3333
BmgT120I	GGNCC	6 cut(s)	528, 1243, 1746, 1837, 3088, 3362
BmiI	GGNNCC	9 cut(s)	805, 1085, 1948, 2249, 2717, 3004, 3135, 3501, 3510
BmsI	GCATC	8 cut(s)	426, 640, 1588, 2173, 2602, 3211, 3757, 4016
BoxI	GACNNNNGTC	1 cut(s)	3559
BpiI	GAAGAC	1 cut(s)	2734
BpmI	CTGGAG	3 cut(s)	1734, 1904, 3699
Bpu10I	CCTNAGC	3 cut(s)	159, 952, 1514
Bpu1102I	GCTNAGC	1 cut(s)	198
Bpu14I	TTCGAA	3 cut(s)	616, 1339, 2002
BpuEI	CTTGAG	3 cut(s)	92, 162, 3455
BpuMI	CCSGG	3 cut(s)	425, 838, 3941
BsaBI	GATNNNNATC	1 cut(s)	557
BsaHI	GRCGYC	3 cut(s)	669, 2248, 2716
BsaI	GGTCTC	3 cut(s)	1432, 2796, 2909
BsaJI	CCNNGG	6 cut(s)	1833, 2823, 2886, 3129, 3708, 4034
BsaWI	WCCGGW	3 cut(s)	530, 1839, 2789
BsaXI	ACNNNNNCTCC	4 cut(s)	73, 103, 3118, 3148
Bse118I	RCCGGY	2 cut(s)	1839, 2789
Bse1I	ACTGG	3 cut(s)	1149, 1803, 2235
Bse21I	CCTNAGG	3 cut(s)	252, 1459, 3504
Bse3DI	GCAATG	6 cut(s)	189, 1869, 2717, 3489, 3626, 3873
Bse8I	GATNNNNATC	1 cut(s)	557
BseBI	CCWGG	7 cut(s)	587, 665, 1236, 1835, 3034, 3709, 3992
BseDI	CCNNGG	6 cut(s)	1833, 2823, 2886, 3129, 3708, 4034
BseGI	GGATG	3 cut(s)	528, 1339, 3949
BseJI	GATNNNNATC	1 cut(s)	557
BseMI	GCAATG	6 cut(s)	189, 1869, 2717, 3489, 3626, 3873
BseNI	ACTGG	3 cut(s)	1149, 1803, 2235
BsePI	GCGCGC	1 cut(s)	3805
BseRI	GAGGAG	3 cut(s)	81, 940, 1713
BseSI	GKGCMC	3 cut(s)	1798, 3334, 3763
BseYI	CCCAGC	2 cut(s)	1762, 2840
BsgI	GTGCAG	3 cut(s)	2373, 2430, 3132
Bsh1236I	CGCG	3 cut(s)	1178, 2511, 3807
Bsh1285I	CGRYCG	1 cut(s)	2122
BshFI	GGCC	7 cut(s)	69, 1594, 1748, 2062, 2828, 2849, 3995
BshNI	GGYRCC	3 cut(s)	1083, 2247, 2715
BshTI	ACCGGT	2 cut(s)	1839, 2789
BsiEI	CGRYCG	1 cut(s)	2122
BsiHKAI	GWGCWC	6 cut(s)	194, 937, 1421, 1798, 3386, 3763
BsiHKCI	CYCGRG	2 cut(s)	2797, 3333
BsiSI	CCGG	8 cut(s)	425, 531, 837, 1374, 1840, 2790, 3632, 3941
BslFI	GGGAC	3 cut(s)	1023, 1167, 2654
BsmAI	GTCTC	7 cut(s)	1432, 1886, 2177, 2796, 2909, 3113, 3480
BsmBI	CGTCTC	1 cut(s)	1886
BsmFI	GGGAC	3 cut(s)	1023, 1167, 2654
BsmI	GAATGC	2 cut(s)	2010, 2876
BsnI	GGCC	7 cut(s)	69, 1594, 1748, 2062, 2828, 2849, 3995
Bso31I	GGTCTC	3 cut(s)	1432, 2796, 2909
BsoBI	CYCGRG	2 cut(s)	2797, 3333
Bsp119I	TTCGAA	3 cut(s)	616, 1339, 2002
Bsp1286I	GDGCHC	7 cut(s)	194, 937, 1421, 1798, 3334, 3386, 3763
Bsp1407I	TGTACA	1 cut(s)	2659
Bsp1720I	GCTNAGC	1 cut(s)	198
BspACI	CCGC	5 cut(s)	231, 2028, 3102, 3190, 3375
BspANI	GGCC	7 cut(s)	69, 1594, 1748, 2062, 2828, 2849, 3995
BspFNI	CGCG	3 cut(s)	1178, 2511, 3807
BspHI	TCATGA	3 cut(s)	1131, 2020, 2784
BspLI	GGNNCC	9 cut(s)	805, 1085, 1948, 2249, 2717, 3004, 3135, 3501, 3510
BspMAI	CTGCAG	4 cut(s)	748, 2698, 2925, 3232
BspMI	ACCTGC	1 cut(s)	2928
BspPI	GGATC	4 cut(s)	566, 3067, 3410, 3919
BspQI	GCTCTTC	1 cut(s)	836
BspT104I	TTCGAA	3 cut(s)	616, 1339, 2002
BspT107I	GGYRCC	3 cut(s)	1083, 2247, 2715
BspTNI	GGTCTC	3 cut(s)	1432, 2796, 2909
BsrBI	CCGCTC	1 cut(s)	2030
BsrDI	GCAATG	6 cut(s)	189, 1869, 2717, 3489, 3626, 3873
BsrFI	RCCGGY	2 cut(s)	1839, 2789
BsrGI	TGTACA	1 cut(s)	2659
BsrI	ACTGG	3 cut(s)	1149, 1803, 2235
BssAI	RCCGGY	2 cut(s)	1839, 2789
BssECI	CCNNGG	6 cut(s)	1833, 2823, 2886, 3129, 3708, 4034
BssHII	GCGCGC	1 cut(s)	3805
BssNI	GRCGYC	3 cut(s)	669, 2248, 2716
BssT1I	CCWWGG	3 cut(s)	2823, 3129, 4034
Bst2UI	CCWGG	7 cut(s)	587, 665, 1236, 1835, 3034, 3709, 3992
Bst6I	CTCTTC	4 cut(s)	103, 836, 2459, 3424
BstACI	GRCGYC	3 cut(s)	669, 2248, 2716
BstAPI	GCANNNNNTGC	3 cut(s)	1793, 3758, 3767
BstAUI	TGTACA	1 cut(s)	2659
BstBI	TTCGAA	3 cut(s)	616, 1339, 2002
BstENI	CCTNNNNNAGG	1 cut(s)	1458
BstF5I	GGATG	3 cut(s)	528, 1339, 3949
BstFNI	CGCG	3 cut(s)	1178, 2511, 3807
BstH2I	RGCGCY	2 cut(s)	2251, 2719
BstHHI	GCGC	7 cut(s)	341, 410, 1178, 2250, 2718, 3807, 3809
BstMAI	GTCTC	7 cut(s)	1432, 1886, 2177, 2796, 2909, 3113, 3480
BstMCI	CGRYCG	1 cut(s)	2122
BstNI	CCWGG	7 cut(s)	587, 665, 1236, 1835, 3034, 3709, 3992
BstNSI	RCATGY	3 cut(s)	817, 3272, 3813
BstPAI	GACNNNNGTC	1 cut(s)	3559
BstSFI	CTRYAG	6 cut(s)	744, 876, 888, 2694, 2921, 3228
BstSLI	GKGCMC	3 cut(s)	1798, 3334, 3763
BstUI	CGCG	3 cut(s)	1178, 2511, 3807
BstV2I	GAAGAC	1 cut(s)	2734
BstX2I	RGATCY	1 cut(s)	3782
BstXI	CCANNNNNNTGG	7 cut(s)	977, 1235, 1390, 1712, 2840, 3832, 3998
BstYI	RGATCY	1 cut(s)	3782
Bsu36I	CCTNAGG	3 cut(s)	252, 1459, 3504
BsuI	GTATCC	2 cut(s)	3109, 3294
BsuRI	GGCC	7 cut(s)	69, 1594, 1748, 2062, 2828, 2849, 3995
BtsCI	GGATG	3 cut(s)	528, 1339, 3949
BtsI	GCAGTG	7 cut(s)	50, 741, 753, 1408, 2541, 2691, 3237
BveI	ACCTGC	1 cut(s)	2928
CaiI	CAGNNNCTG	2 cut(s)	3236, 3569
CciI	TCATGA	3 cut(s)	1131, 2020, 2784
CfoI	GCGC	7 cut(s)	341, 410, 1178, 2250, 2718, 3807, 3809
Cfr10I	RCCGGY	2 cut(s)	1839, 2789
Cfr13I	GGNCC	6 cut(s)	528, 1243, 1746, 1837, 3088, 3362
CseI	GACGC	2 cut(s)	677, 2924
Csp6I	GTAC	8 cut(s)	463, 565, 1823, 1916, 2413, 2660, 3025, 3401
CspAI	ACCGGT	2 cut(s)	1839, 2789
CviQI	GTAC	8 cut(s)	463, 565, 1823, 1916, 2413, 2660, 3025, 3401
DinI	GGCGCC	2 cut(s)	2249, 2717
DriI	GACNNNNNGTC	1 cut(s)	1807
Eam1104I	CTCTTC	4 cut(s)	103, 836, 2459, 3424
Eam1105I	GACNNNNNGTC	1 cut(s)	1807
EarI	CTCTTC	4 cut(s)	103, 836, 2459, 3424
Ecl136II	GAGCTC	2 cut(s)	192, 3384
Eco130I	CCWWGG	3 cut(s)	2823, 3129, 4034
Eco147I	AGGCCT	3 cut(s)	69, 1594, 2062
Eco24I	GRGCYC	2 cut(s)	194, 3386
Eco31I	GGTCTC	3 cut(s)	1432, 2796, 2909
Eco32I	GATATC	2 cut(s)	513, 2485
Eco47I	GGWCC	5 cut(s)	528, 1243, 1837, 3088, 3362
Eco53kI	GAGCTC	2 cut(s)	192, 3384
Eco57I	CTGAAG	2 cut(s)	3591, 4008
Eco81I	CCTNAGG	3 cut(s)	252, 1459, 3504
Eco88I	CYCGRG	2 cut(s)	2797, 3333
EcoICRI	GAGCTC	2 cut(s)	192, 3384
EcoNI	CCTNNNNNAGG	1 cut(s)	1458
EcoRI	GAATTC	1 cut(s)	1341
EcoRII	CCWGG	7 cut(s)	585, 663, 1234, 1833, 3032, 3707, 3990
EcoRV	GATATC	2 cut(s)	513, 2485
EcoT14I	CCWWGG	3 cut(s)	2823, 3129, 4034
EcoT22I	ATGCAT	2 cut(s)	460, 2287
EcoT38I	GRGCYC	2 cut(s)	194, 3386
EgeI	GGCGCC	2 cut(s)	2249, 2717
EheI	GGCGCC	2 cut(s)	2249, 2717
ErhI	CCWWGG	3 cut(s)	2823, 3129, 4034
Esp3I	CGTCTC	1 cut(s)	1886
FalI	AAGNNNNNCTT	4 cut(s)	840, 872, 2204, 2236
FaqI	GGGAC	3 cut(s)	1023, 1167, 2654
FauNDI	CATATG	1 cut(s)	2341
FbaI	TGATCA	2 cut(s)	2394, 2563
FblI	GTMKAC	2 cut(s)	2367, 3273
FokI	GGATG	3 cut(s)	535, 1346, 3956
FriOI	GRGCYC	2 cut(s)	194, 3386
GlaI	GCGC	7 cut(s)	340, 409, 1177, 2249, 2717, 3806, 3808
GsaI	CCCAGC	2 cut(s)	1766, 2844
GsuI	CTGGAG	3 cut(s)	1734, 1904, 3699
HaeII	RGCGCY	2 cut(s)	2251, 2719
HaeIII	GGCC	7 cut(s)	69, 1594, 1748, 2062, 2828, 2849, 3995
HapII	CCGG	8 cut(s)	425, 531, 837, 1374, 1840, 2790, 3632, 3941
HgaI	GACGC	2 cut(s)	677, 2924
HhaI	GCGC	7 cut(s)	341, 410, 1178, 2250, 2718, 3807, 3809
Hin1I	GRCGYC	3 cut(s)	669, 2248, 2716
Hin6I	GCGC	7 cut(s)	339, 408, 1176, 2248, 2716, 3805, 3807
HinP1I	GCGC	7 cut(s)	339, 408, 1176, 2248, 2716, 3805, 3807
HindIII	AAGCTT	2 cut(s)	1994, 2213
HpaII	CCGG	8 cut(s)	425, 531, 837, 1374, 1840, 2790, 3632, 3941
HphI	GGTGA	7 cut(s)	254, 413, 1084, 1868, 2082, 2092, 2118
Hpy166II	GTNNAC	7 cut(s)	528, 819, 1142, 1796, 2368, 3274, 3761
Hpy8I	GTNNAC	7 cut(s)	528, 819, 1142, 1796, 2368, 3274, 3761
Hpy99I	CGWCG	2 cut(s)	923, 2940
HpyCH4IV	ACGT	3 cut(s)	312, 918, 3647
HpySE526I	ACGT	3 cut(s)	312, 918, 3647
Hsp92I	GRCGYC	3 cut(s)	669, 2248, 2716
HspAI	GCGC	7 cut(s)	339, 408, 1176, 2248, 2716, 3805, 3807
KasI	GGCGCC	2 cut(s)	2247, 2715
Ksp22I	TGATCA	2 cut(s)	2394, 2563
LguI	GCTCTTC	1 cut(s)	836
LmnI	GCTCC	8 cut(s)	479, 803, 1016, 1168, 1294, 2227, 3139, 3508
LweI	GCATC	8 cut(s)	426, 640, 1588, 2173, 2602, 3211, 3757, 4016
MaeII	ACGT	3 cut(s)	312, 918, 3647
MaeIII	GTNAC	6 cut(s)	9, 79, 766, 980, 1279, 3950
MbiI	CCGCTC	1 cut(s)	2030
MfeI	CAATTG	2 cut(s)	2298, 3828
MflI	RGATCY	1 cut(s)	3782
MhlI	GDGCHC	7 cut(s)	194, 937, 1421, 1798, 3334, 3386, 3763
MluI	ACGCGT	1 cut(s)	2509
Mly113I	GGCGCC	2 cut(s)	2248, 2716
MlyI	GAGTC	8 cut(s)	212, 763, 1710, 1796, 1817, 3340, 3569, 3782
MmeI	TCCRAC	6 cut(s)	285, 287, 500, 1729, 2940, 3443
Mph1103I	ATGCAT	2 cut(s)	460, 2287
MroXI	GAANNNNTTC	3 cut(s)	1933, 2110, 2780
MseI	TTAA	9 cut(s)	959, 1505, 1569, 1755, 2406, 2426, 2540, 3147, 3264
MslI	CAYNNNNRTG	4 cut(s)	746, 812, 3494, 3830
MspA1I	CMGCKG	3 cut(s)	231, 1202, 2444
MspI	CCGG	8 cut(s)	425, 531, 837, 1374, 1840, 2790, 3632, 3941
MunI	CAATTG	2 cut(s)	2298, 3828
Mva1269I	GAATGC	2 cut(s)	2010, 2876
MvaI	CCWGG	7 cut(s)	587, 665, 1236, 1835, 3034, 3709, 3992
MvnI	CGCG	3 cut(s)	1178, 2511, 3807
NarI	GGCGCC	2 cut(s)	2248, 2716
NciI	CCSGG	3 cut(s)	425, 838, 3941
NdeI	CATATG	1 cut(s)	2341
NlaIV	GGNNCC	9 cut(s)	805, 1085, 1948, 2249, 2717, 3004, 3135, 3501, 3510
NmuCI	GTSAC	3 cut(s)	9, 79, 766
NsiI	ATGCAT	2 cut(s)	460, 2287
NspI	RCATGY	3 cut(s)	817, 3272, 3813
NspV	TTCGAA	3 cut(s)	616, 1339, 2002
OliI	CACNNNNGTG	2 cut(s)	746, 3830
PagI	TCATGA	3 cut(s)	1131, 2020, 2784
PauI	GCGCGC	1 cut(s)	3805
PceI	AGGCCT	3 cut(s)	69, 1594, 2062
PciI	ACATGT	1 cut(s)	813
PciSI	GCTCTTC	1 cut(s)	836
PctI	GAATGC	2 cut(s)	2010, 2876
PdmI	GAANNNNTTC	3 cut(s)	1933, 2110, 2780
PfeI	GAWTC	7 cut(s)	17, 164, 291, 926, 2497, 2926, 3051
PflMI	CCANNNNNTGG	1 cut(s)	269
PfoI	TCCNGGA	2 cut(s)	663, 836
PinAI	ACCGGT	2 cut(s)	1839, 2789
PleI	GAGTC	8 cut(s)	212, 763, 1709, 1796, 1816, 3340, 3568, 3781
PluTI	GGCGCC	2 cut(s)	2251, 2719
PpsI	GAGTC	8 cut(s)	212, 763, 1709, 1796, 1816, 3340, 3568, 3781
PscI	ACATGT	1 cut(s)	813
PshAI	GACNNNNGTC	1 cut(s)	3559
PshBI	ATTAAT	1 cut(s)	2406
Psp124BI	GAGCTC	2 cut(s)	194, 3386
Psp1406I	AACGTT	1 cut(s)	3647
Psp6I	CCWGG	7 cut(s)	585, 663, 1234, 1833, 3032, 3707, 3990
PspFI	CCCAGC	2 cut(s)	1762, 2840
PspGI	CCWGG	7 cut(s)	585, 663, 1234, 1833, 3032, 3707, 3990
PspN4I	GGNNCC	9 cut(s)	805, 1085, 1948, 2249, 2717, 3004, 3135, 3501, 3510
PspPI	GGNCC	6 cut(s)	528, 1243, 1746, 1837, 3088, 3362
PstI	CTGCAG	4 cut(s)	748, 2698, 2925, 3232
PstNI	CAGNNNCTG	2 cut(s)	3236, 3569
PsuI	RGATCY	1 cut(s)	3782
PteI	GCGCGC	1 cut(s)	3805
PvuII	CAGCTG	2 cut(s)	1202, 2444
RsaI	GTAC	8 cut(s)	464, 566, 1824, 1917, 2414, 2661, 3026, 3402
RsaNI	GTAC	8 cut(s)	463, 565, 1823, 1916, 2413, 2660, 3025, 3401
RseI	CAYNNNNRTG	4 cut(s)	746, 812, 3494, 3830
SacI	GAGCTC	2 cut(s)	194, 3386
SapI	GCTCTTC	1 cut(s)	836
SaqAI	TTAA	9 cut(s)	959, 1505, 1569, 1755, 2406, 2426, 2540, 3147, 3264
Sau96I	GGNCC	6 cut(s)	528, 1243, 1746, 1837, 3088, 3362
ScaI	AGTACT	1 cut(s)	2414
SchI	GAGTC	8 cut(s)	212, 763, 1710, 1796, 1817, 3340, 3569, 3782
SduI	GDGCHC	7 cut(s)	194, 937, 1421, 1798, 3334, 3386, 3763
SfaNI	GCATC	8 cut(s)	426, 640, 1588, 2173, 2602, 3211, 3757, 4016
SfcI	CTRYAG	6 cut(s)	744, 876, 888, 2694, 2921, 3228
SfoI	GGCGCC	2 cut(s)	2249, 2717
SfuI	TTCGAA	3 cut(s)	616, 1339, 2002
SinI	GGWCC	5 cut(s)	528, 1243, 1837, 3088, 3362
SmiMI	CAYNNNNRTG	4 cut(s)	746, 812, 3494, 3830
SmlI	CTYRAG	3 cut(s)	71, 177, 3470
SmoI	CTYRAG	3 cut(s)	71, 177, 3470
SpeI	ACTAGT	1 cut(s)	1288
SseBI	AGGCCT	3 cut(s)	69, 1594, 2062
SsiI	CCGC	5 cut(s)	231, 2028, 3102, 3190, 3375
SspDI	GGCGCC	2 cut(s)	2247, 2715
SstI	GAGCTC	2 cut(s)	194, 3386
StuI	AGGCCT	3 cut(s)	69, 1594, 2062
StyI	CCWWGG	3 cut(s)	2823, 3129, 4034
TaiI	ACGT	3 cut(s)	315, 921, 3650
TaqII	GACCGA	3 cut(s)	1117, 1260, 3005
TatI	WGTACW	5 cut(s)	462, 1915, 2412, 2659, 3400
TfiI	GAWTC	7 cut(s)	17, 164, 291, 926, 2497, 2926, 3051
Tru1I	TTAA	9 cut(s)	959, 1505, 1569, 1755, 2406, 2426, 2540, 3147, 3264
Tru9I	TTAA	9 cut(s)	959, 1505, 1569, 1755, 2406, 2426, 2540, 3147, 3264
TseFI	GTSAC	3 cut(s)	9, 79, 766
Tsp45I	GTSAC	3 cut(s)	9, 79, 766
Van91I	CCANNNNNTGG	1 cut(s)	269
VneI	GTGCAC	2 cut(s)	1794, 3759
VpaK11BI	GGWCC	5 cut(s)	528, 1243, 1837, 3088, 3362
VspI	ATTAAT	1 cut(s)	2406
XagI	CCTNNNNNAGG	1 cut(s)	1458
XapI	RAATTY	4 cut(s)	691, 897, 1341, 2107
XbaI	TCTAGA	2 cut(s)	2206, 3799
XceI	RCATGY	3 cut(s)	817, 3272, 3813
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1094
XmiI	GTMKAC	2 cut(s)	2367, 3273
XmnI	GAANNNNTTC	3 cut(s)	1933, 2110, 2780
ZrmI	AGTACT	1 cut(s)	2414
Zsp2I	ATGCAT	2 cut(s)	460, 2287

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.