Rroxscaffold_6G00410950

ABC transporter B family member

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
Physical Location & Seq
Forward (+)
33480264 .. 33484318
4055 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00410950.1

Sequence Viewer

Length: 2895 bp
ATGGGCGCATTTGCAAAGGCTAAAGTTGCAGCTGCCAAGATATTTCGGATCATTGACCACAAGCCAGGCATGGACCGAAACAGTGAATCAGGGGTTGAATTGGAATCTGTTACAGGACTAGTGGAGCTGAAAAATGTGGATTTCTCCTACCCATCAAGGCAGGATGTTCGTATTCTCAACAATTTCTCTTTGAATGTTCCGGCTGGAAAAACCATTGCTTTGGTCGGTAGCAGTGGCTCTGGTAAAAGCACTGTGGTCTCCCTCATTGAGAGATTTTATGACCCCTCCTCAGGACAAGTTCTGCTAGATGGACATGACATAAAGACATTGAAATTAAAGTGGCTACGGCAGCAGATAGGGCTTGTGAGCCAAGAGCCTGCTCTGTTTGCTACCACCATTAAAGAGAATATACTTTTGGGGAGGCCTGATGCAGACCAAGTTGAGATTGAAGAAGCTGCCAGAGTTGCCAATGCTCATTCATTCATTGTCAAACTTCCTGATGGTTTTGATACTCAGGTAGGGGAAAGAGGAGTGCAACTGTCTGGAGGACAGAAGCAGAGGATAGCCATAGCAAGGGCAATGCTTAAAAACCCAGCAATCCTTCTCTTAGATGAGGCAACAAGTGCATTGGACTCTGAGTCGGAAAAGCTGGTGCAAGAAGCCTTGGACCGGTTTATGATAGGCAGAACAACTCTTGTCATTGCTCACCGCCTCTCAACCATTCGCAAAGCTGACCTTGTAGCTGTACTCCAGCAGGGAAGTGTTTCTGAAATTGGAACCCATGATGAACTCTTTTCTAAAGGAGAAAATGGTGTTTATGCCAAGCTCATTCGAATGCAAGAGGCAGCTCATGAGACTGCTCTCAACAATGCCAGAAAGAGTAGTGCTAGGCCTTCTAGTGCAAGAAACTCTGTTAGCTCACCCATAATCGCCCGAAATTCTTCATACGGTCGATCACCATATTCACGCAGGCTCTCTGACTTTTCCACTTCTGATTTTAGTCTCTCCCTTGATGCCACACACCCCAATTACCGTCTAGAAAAGCTTGCCTTCAAGGAGCAAGCCAGTTCCTTCTGGCGCCTTGCCAAGATGAACTCTCCTGAATGGGTGTATGCATTAGTTGGTTCAATTGGCTCTGTTGTTTGTGGTTCTCTTAGTGCTTTCTTTGCATATGTTCTAAGTGCAGTCCTCAGTGTCTACTACAATCCGGACCATGATTTCATGATCAAGCAAATTAATAAGTACTGCTATTTGTTAATTGGACTTTCATCAGCTGCACTACTCTTCAACACGCTACAACATTCTTTCTGGGATATTGTGGGAGAAAATCTTACAAAACGGGTGAGGGAGAAAATGCTGACAGCAGTATTGAAAAATGAAATGGCATGGTTTGATCAGGAGGAAAATGAGAGTGGCAGAATTGCAGCAAGGCTGGCCCTTGATGCCAACAATGTCAGATCAGCCATTGGAGACAGGATATCTGTTATTGTACAGAACACAGCACTCATGCTAGTTGCTTGCACTGCAGGATTTGTTTTGCAATGGCGCCTTGCCCTTGTCCTCGTAGCTGTCTTCCCTGTTGTTGTTGCCGCCACAGTTTTGCAGAAAATGTTCATGACCGGTTTCTCGGGAGACCTTGAAGCTGCACATGCCAAGGCCACCCAACTAGCTGGGGAGGCCATAGCCAATGTAAGGACTGTTGCTGCATTCAACTCCGAGGGAAAAATTGTTGGTCTCTTTTCCTCCAACCTGCAGATTCCCCTGCGTCGGTGTTTTTGGAAGGGTCAGATTGCTGGAAGTGGATTTGGGATAGCTCAATTTGCACTTTATGCCTCCTATGCTCTAGGTCTTTGGTATGCTTCCTGGCTTGTAAAGCATGGAATCTCTGATTTCTCAAAGGCGATCCGAGTTTTCATGGTCCTCATGGTATCTGCTAACGGTGCAGCAGAGACACTAACCCTGGCTCCTGACTTTATTAAGGGTGGTCGAGCCATGCAATCAGTTTTTGAGCTCCTTGACCGTAAAACTGAAATTGAACCTGATGATATTGATGCTACTGCAGTGCCTGACCGTCTGCGTGGAGAAGTTGAGTTTAAGCATGTAGACTTTTCGTATCCTTCTCGACCTGATGTTCCTGTGTTTCGTGATCTCTCCCTCCGTGCCCGAGCAGGCAAGACTCTTGCTCTTGTTGGTCCTAGTGGGTGTGGAAAGAGCTCAGTCATTTCATTAGTACAGCGGTTTTATGACCCAACATCAGGAAGAGTTATTATTGACGGAAAGGATATTCGCAAATACAATCTCAAGTCTCTCAGAAGGCACATTGCTGTGGTTCCCCAGGAGCCATGCCTCTTTGCTACAACTATATATGAAAATATCGCCTATGGACACGAGTCAGCAACTGAGGCTGAGATCATTGAAGCTGCTAATCTAGCCAATGCTCACAAGTTTGTATCTGCATTGCCAGATGGCTACAAAACGTTTGTTGGGGAGAGGGGAATTCAACTCTCTGGAGGACAGAAACAAAGGATTGCTATTGCCAGGGCTTTACTGAGGAAGGCAGAGCTTATGCTTCTCGATGAAGCCACAAGTGCACTTGATGCCGAGTCCGAGAGATCTATTCAAGAAGCTCTGGAGCGCGCTTGTTCAGGAAAAACCACAATTGTGGTTGCACACAGACTATCAACTATTAGAAATGCCAATGTTATTGCAGTAATTGATGATGGGAAAGTGGCAGAGCAAGGATCACACAACCATCTATTGAAAAACTACCCGGACGGGTGTTACGCGCGCATGATACAGCTACAAAGATTTTCACACAGCCAGGCCATTGGAATAGCATCAGGTTCAAGTTCTTCAGTAAGACCAAGGGAAGAGGAAGACAGAGAAGGCAAGTAA

Protein Analysis

964

Amino Acids

105.42

Weight (kDa)

8.84

Isoelectric Point (pI)

37.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_tran PF00005 59 - 208 2.1e-35 ABC transporter
ABC_membrane PF00664 377 - 643 3.3e-53 ABC transporter transmembrane region
ABC_tran PF00005 715 - 863 1.5e-34 ABC transporter
SMC_N PF02463 751 - 903 3e-06 RecF/RecN/SMC N terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0013415)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G36910
fragaria_vesca FvH4_6g16450 FvH4_6g16450 FvH4_6g16450
malus_domestica MD04G1092800.v1.1
prunus_persica Prupe.7G129600_v2.0.a1
pyrus_communis pycom04g08730 pycom04g08740 pycom12g11150
rosa_chinensis RchiOBHm_Chr3g0470311
rosa_laevigata RLG00000024279
rosa_multiflora Rmu_sc0001093.1_g000001
rosa_roxburghii Rroxscaffold_6G00410950
rosa_rugosa Rorug03G0108000
rosa_samantha Rh3AG157800 Rh3BG182100 Rh3DG192800
rosa_wichuraiana Rw3G015010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1758
AccB1I GGYRCC 2 cut(s) 1077, 1545
AccI GTMKAC 2 cut(s) 1197, 2103
AccII CGCG 3 cut(s) 2637, 2786, 2788
AccIII TCCGGA 1 cut(s) 1207
AciI CCGC 3 cut(s) 709, 1590, 2236
AclI AACGTT 1 cut(s) 2477
AclWI GGATC 3 cut(s) 56, 1897, 2749
AcsI RAATTY 2 cut(s) 937, 2496
AcuI CTGAAG 1 cut(s) 2838
AcyI GRCGYC 2 cut(s) 1078, 1546
AfaI GTAC 4 cut(s) 747, 1244, 1491, 2232
AfiI CCNNNNNNNGG 6 cut(s) 290, 573, 669, 1692, 1767, 2255
AgeI ACCGGT 2 cut(s) 669, 1619
AhdI GACNNNNNGTC 1 cut(s) 637
AhlI ACTAGT 1 cut(s) 118
AjnI CCWGG 6 cut(s) 64, 1862, 1959, 2334, 2537, 2820
AjuI GAANNNNNNNTTGG 2 cut(s) 398, 430
AleI CACNNNNGTG 1 cut(s) 2660
Alw21I GWGCWC 3 cut(s) 2013, 2216, 2593
Alw26I GTCTC 8 cut(s) 262, 848, 1007, 1464, 1626, 1739, 1943, 2310
Alw44I GTGCAC 1 cut(s) 2589
AlwI GGATC 3 cut(s) 56, 1897, 2749
AlwNI CAGNNNCTG 2 cut(s) 2066, 2399
Ama87I CYCGRG 2 cut(s) 1627, 2163
Aor13HI TCCGGA 1 cut(s) 1207
AoxI GGCC 6 cut(s) 422, 890, 1434, 1656, 1677, 2823
ApaLI GTGCAC 1 cut(s) 2589
ApoI RAATTY 2 cut(s) 937, 2496
AseI ATTAAT 1 cut(s) 1236
AsiGI ACCGGT 2 cut(s) 669, 1619
Asp700I GAANNNNTTC 3 cut(s) 763, 940, 1610
AspLEI GCGC 7 cut(s) 8, 1080, 1548, 2637, 2639, 2788, 2790
AspS9I GGNCC 6 cut(s) 73, 667, 1210, 1435, 1918, 2192
AsuC2I CCSGG 1 cut(s) 2771
AsuHPI GGTGA 4 cut(s) 698, 912, 948, 1354
AsuII TTCGAA 1 cut(s) 832
AvaI CYCGRG 2 cut(s) 1627, 2163
AvaII GGWCC 5 cut(s) 73, 667, 1210, 1918, 2192
AxyI CCTNAGG 1 cut(s) 289
BaeGI GKGCMC 2 cut(s) 2164, 2593
BaeI ACNNNNGTAYC 2 cut(s) 501, 534
BanI GGYRCC 2 cut(s) 1077, 1545
BanII GRGCYC 2 cut(s) 2013, 2216
BauI CACGAG 1 cut(s) 2387
BbsI GAAGAC 2 cut(s) 1564, 2883
Bbv12I GWGCWC 3 cut(s) 2013, 2216, 2593
BccI CCATC 6 cut(s) 160, 302, 494, 2459, 2714, 2760
BceAI ACGGC 1 cut(s) 362
BcgI CGANNNNNNTGC 2 cut(s) 149, 183
BciT130I CCWGG 6 cut(s) 66, 1864, 1961, 2336, 2539, 2822
BciVI GTATCC 1 cut(s) 2124
BclI TGATCA 2 cut(s) 1224, 1393
BcnI CCSGG 1 cut(s) 2771
BcoDI GTCTC 8 cut(s) 262, 848, 1007, 1464, 1626, 1739, 1943, 2310
BcuI ACTAGT 1 cut(s) 118
BfmI CTRYAG 3 cut(s) 1524, 1751, 2058
BfoI RGCGCY 2 cut(s) 1081, 1549
BfuAI ACCTGC 1 cut(s) 1758
BfuI GTATCC 1 cut(s) 2124
BglII AGATCT 1 cut(s) 2612
BmcAI AGTACT 1 cut(s) 1244
Bme1390I CCNGG 7 cut(s) 66, 1864, 1961, 2336, 2539, 2771, 2822
Bme18I GGWCC 5 cut(s) 73, 667, 1210, 1918, 2192
BmeRI GACNNNNNGTC 1 cut(s) 637
BmeT110I CYCGRG 2 cut(s) 1627, 2163
BmgT120I GGNCC 6 cut(s) 73, 667, 1210, 1435, 1918, 2192
BmiI GGNNCC 6 cut(s) 778, 1079, 1547, 1965, 2331, 2340
BmrFI CCNGG 7 cut(s) 66, 1864, 1961, 2336, 2539, 2771, 2822
BmsI GCATC 6 cut(s) 418, 1003, 1432, 2041, 2587, 2846
BoxI GACNNNNGTC 1 cut(s) 2389
BpiI GAAGAC 2 cut(s) 1564, 2883
BpmI CTGGAG 4 cut(s) 564, 734, 2529, 2651
Bpu14I TTCGAA 1 cut(s) 832
BpuEI CTTGAG 1 cut(s) 2285
BpuMI CCSGG 1 cut(s) 2771
BsaHI GRCGYC 2 cut(s) 1078, 1546
BsaI GGTCTC 3 cut(s) 262, 1626, 1739
BsaJI CCNNGG 7 cut(s) 663, 1653, 1716, 1959, 2334, 2538, 2864
BsaWI WCCGGW 3 cut(s) 669, 1207, 1619
BsaXI ACNNNNNCTCC 2 cut(s) 1948, 1978
Bsc4I CCNNNNNNNGG 6 cut(s) 290, 573, 669, 1692, 1767, 2255
Bse118I RCCGGY 2 cut(s) 669, 1619
Bse1I ACTGG 1 cut(s) 1065
Bse21I CCTNAGG 1 cut(s) 289
Bse3DI GCAATG 6 cut(s) 213, 585, 699, 1547, 2319, 2456
BseAI TCCGGA 1 cut(s) 1207
BseBI CCWGG 6 cut(s) 66, 1864, 1961, 2336, 2539, 2822
BseDI CCNNGG 7 cut(s) 663, 1653, 1716, 1959, 2334, 2538, 2864
BseGI GGATG 1 cut(s) 169
BseLI CCNNNNNNNGG 6 cut(s) 290, 573, 669, 1692, 1767, 2255
BseMI GCAATG 6 cut(s) 213, 585, 699, 1547, 2319, 2456
BseMII CTCAG 9 cut(s) 303, 527, 627, 1204, 2229, 2323, 2391, 2397, 2540
BseNI ACTGG 1 cut(s) 1065
BsePI GCGCGC 2 cut(s) 2635, 2786
BseRI GAGGAG 2 cut(s) 277, 543
BseSI GKGCMC 2 cut(s) 2164, 2593
BseYI CCCAGC 2 cut(s) 592, 1670
BsgI GTGCAG 4 cut(s) 1203, 1260, 1629, 1962
Bsh1236I CGCG 3 cut(s) 2637, 2786, 2788
Bsh1285I CGRYCG 1 cut(s) 952
BshFI GGCC 6 cut(s) 424, 892, 1436, 1658, 1679, 2825
BshNI GGYRCC 2 cut(s) 1077, 1545
BshTI ACCGGT 2 cut(s) 669, 1619
BsiEI CGRYCG 1 cut(s) 952
BsiHKAI GWGCWC 3 cut(s) 2013, 2216, 2593
BsiHKCI CYCGRG 2 cut(s) 1627, 2163
BsiSI CCGG 5 cut(s) 200, 670, 1208, 1620, 2771
BslI CCNNNNNNNGG 6 cut(s) 290, 573, 669, 1692, 1767, 2255
BsmAI GTCTC 8 cut(s) 262, 848, 1007, 1464, 1626, 1739, 1943, 2310
BsmI GAATGC 2 cut(s) 840, 1706
BsnI GGCC 6 cut(s) 424, 892, 1436, 1658, 1679, 2825
Bso31I GGTCTC 3 cut(s) 262, 1626, 1739
BsoBI CYCGRG 2 cut(s) 1627, 2163
Bsp119I TTCGAA 1 cut(s) 832
Bsp1286I GDGCHC 4 cut(s) 2013, 2164, 2216, 2593
Bsp13I TCCGGA 1 cut(s) 1207
Bsp1407I TGTACA 1 cut(s) 1489
BspACI CCGC 3 cut(s) 709, 1590, 2236
BspANI GGCC 6 cut(s) 424, 892, 1436, 1658, 1679, 2825
BspCNI CTCAG 9 cut(s) 302, 526, 628, 1203, 2228, 2322, 2392, 2398, 2541
BspEI TCCGGA 1 cut(s) 1207
BspFNI CGCG 3 cut(s) 2637, 2786, 2788
BspHI TCATGA 3 cut(s) 850, 1221, 1614
BspLI GGNNCC 6 cut(s) 778, 1079, 1547, 1965, 2331, 2340
BspMAI CTGCAG 3 cut(s) 1528, 1755, 2062
BspMI ACCTGC 1 cut(s) 1758
BspPI GGATC 3 cut(s) 56, 1897, 2749
BspT104I TTCGAA 1 cut(s) 832
BspT107I GGYRCC 2 cut(s) 1077, 1545
BspTNI GGTCTC 3 cut(s) 262, 1626, 1739
BsrDI GCAATG 6 cut(s) 213, 585, 699, 1547, 2319, 2456
BsrFI RCCGGY 2 cut(s) 669, 1619
BsrGI TGTACA 1 cut(s) 1489
BsrI ACTGG 1 cut(s) 1065
BssAI RCCGGY 2 cut(s) 669, 1619
BssECI CCNNGG 7 cut(s) 663, 1653, 1716, 1959, 2334, 2538, 2864
BssHII GCGCGC 2 cut(s) 2635, 2786
BssNI GRCGYC 2 cut(s) 1078, 1546
BssSI CACGAG 1 cut(s) 2387
BssT1I CCWWGG 3 cut(s) 663, 1653, 2864
Bst2BI CACGAG 1 cut(s) 2387
Bst2UI CCWGG 6 cut(s) 66, 1864, 1961, 2336, 2539, 2822
Bst6I CTCTTC 3 cut(s) 1289, 2254, 2865
BstACI GRCGYC 2 cut(s) 1078, 1546
BstAPI GCANNNNNTGC 3 cut(s) 623, 1829, 2597
BstAUI TGTACA 1 cut(s) 1489
BstBI TTCGAA 1 cut(s) 832
BstC8I GCNNGC 9 cut(s) 378, 971, 1047, 1062, 1434, 1519, 2170, 2637, 2788
BstF5I GGATG 1 cut(s) 169
BstFNI CGCG 3 cut(s) 2637, 2786, 2788
BstH2I RGCGCY 2 cut(s) 1081, 1549
BstHHI GCGC 7 cut(s) 8, 1080, 1548, 2637, 2639, 2788, 2790
BstMAI GTCTC 8 cut(s) 262, 848, 1007, 1464, 1626, 1739, 1943, 2310
BstMCI CGRYCG 1 cut(s) 952
BstNI CCWGG 6 cut(s) 66, 1864, 1961, 2336, 2539, 2822
BstNSI RCATGY 2 cut(s) 1652, 2102
BstPAI GACNNNNGTC 1 cut(s) 2389
BstSCI CCNGG 7 cut(s) 64, 1862, 1959, 2334, 2537, 2769, 2820
BstSFI CTRYAG 3 cut(s) 1524, 1751, 2058
BstSLI GKGCMC 2 cut(s) 2164, 2593
BstUI CGCG 3 cut(s) 2637, 2786, 2788
BstV2I GAAGAC 2 cut(s) 1564, 2883
BstX2I RGATCY 1 cut(s) 2612
BstXI CCANNNNNNTGG 4 cut(s) 220, 1670, 2662, 2828
BstYI RGATCY 1 cut(s) 2612
Bsu36I CCTNAGG 1 cut(s) 289
BsuI GTATCC 1 cut(s) 2124
BsuRI GGCC 6 cut(s) 424, 892, 1436, 1658, 1679, 2825
BtsCI GGATG 1 cut(s) 169
BtsI GCAGTG 3 cut(s) 238, 1521, 2067
BtsIMutI CAGTG 6 cut(s) 88, 238, 249, 1198, 1521, 2067
BveI ACCTGC 1 cut(s) 1758
Cac8I GCNNGC 9 cut(s) 378, 971, 1047, 1062, 1434, 1519, 2170, 2637, 2788
CaiI CAGNNNCTG 2 cut(s) 2066, 2399
CciI TCATGA 3 cut(s) 850, 1221, 1614
CfoI GCGC 7 cut(s) 8, 1080, 1548, 2637, 2639, 2788, 2790
Cfr10I RCCGGY 2 cut(s) 669, 1619
Cfr13I GGNCC 6 cut(s) 73, 667, 1210, 1435, 1918, 2192
CseI GACGC 1 cut(s) 1754
Csp6I GTAC 4 cut(s) 746, 1243, 1490, 2231
CspAI ACCGGT 2 cut(s) 669, 1619
CviQI GTAC 4 cut(s) 746, 1243, 1490, 2231
DinI GGCGCC 2 cut(s) 1079, 1547
DriI GACNNNNNGTC 1 cut(s) 637
Eam1104I CTCTTC 3 cut(s) 1289, 2254, 2865
Eam1105I GACNNNNNGTC 1 cut(s) 637
EarI CTCTTC 3 cut(s) 1289, 2254, 2865
Ecl136II GAGCTC 2 cut(s) 2011, 2214
Eco130I CCWWGG 3 cut(s) 663, 1653, 2864
Eco147I AGGCCT 2 cut(s) 424, 892
Eco24I GRGCYC 2 cut(s) 2013, 2216
Eco31I GGTCTC 3 cut(s) 262, 1626, 1739
Eco32I GATATC 1 cut(s) 1479
Eco47I GGWCC 5 cut(s) 73, 667, 1210, 1918, 2192
Eco53kI GAGCTC 2 cut(s) 2011, 2214
Eco57I CTGAAG 1 cut(s) 2838
Eco81I CCTNAGG 1 cut(s) 289
Eco88I CYCGRG 2 cut(s) 1627, 2163
EcoICRI GAGCTC 2 cut(s) 2011, 2214
EcoRI GAATTC 1 cut(s) 2496
EcoRII CCWGG 6 cut(s) 64, 1862, 1959, 2334, 2537, 2820
EcoRV GATATC 1 cut(s) 1479
EcoT14I CCWWGG 3 cut(s) 663, 1653, 2864
EcoT22I ATGCAT 1 cut(s) 1117
EcoT38I GRGCYC 2 cut(s) 2013, 2216
EgeI GGCGCC 2 cut(s) 1079, 1547
EheI GGCGCC 2 cut(s) 1079, 1547
ErhI CCWWGG 3 cut(s) 663, 1653, 2864
FalI AAGNNNNNCTT 4 cut(s) 720, 752, 1034, 1066
FauNDI CATATG 1 cut(s) 1171
FbaI TGATCA 2 cut(s) 1224, 1393
FblI GTMKAC 2 cut(s) 1197, 2103
FokI GGATG 1 cut(s) 176
FriOI GRGCYC 2 cut(s) 2013, 2216
GlaI GCGC 7 cut(s) 7, 1079, 1547, 2636, 2638, 2787, 2789
GsaI CCCAGC 2 cut(s) 596, 1674
GsuI CTGGAG 4 cut(s) 564, 734, 2529, 2651
HaeII RGCGCY 2 cut(s) 1081, 1549
HaeIII GGCC 6 cut(s) 424, 892, 1436, 1658, 1679, 2825
HapII CCGG 5 cut(s) 200, 670, 1208, 1620, 2771
HgaI GACGC 1 cut(s) 1754
HhaI GCGC 7 cut(s) 8, 1080, 1548, 2637, 2639, 2788, 2790
Hin1I GRCGYC 2 cut(s) 1078, 1546
Hin6I GCGC 7 cut(s) 6, 1078, 1546, 2635, 2637, 2786, 2788
HinP1I GCGC 7 cut(s) 6, 1078, 1546, 2635, 2637, 2786, 2788
HindIII AAGCTT 1 cut(s) 1043
HinfI GANTC 9 cut(s) 86, 104, 632, 638, 1756, 1881, 2176, 2390, 2603
HpaII CCGG 5 cut(s) 200, 670, 1208, 1620, 2771
HphI GGTGA 4 cut(s) 698, 912, 948, 1354
Hpy166II GTNNAC 3 cut(s) 1198, 2104, 2591
Hpy8I GTNNAC 3 cut(s) 1198, 2104, 2591
Hpy99I CGWCG 1 cut(s) 1770
HpyAV CCTTC 9 cut(s) 611, 903, 1060, 1081, 1774, 2127, 2307, 2548, 2879
HpyCH4IV ACGT 1 cut(s) 2477
HpySE526I ACGT 1 cut(s) 2477
Hsp92I GRCGYC 2 cut(s) 1078, 1546
HspAI GCGC 7 cut(s) 6, 1078, 1546, 2635, 2637, 2786, 2788
KasI GGCGCC 2 cut(s) 1077, 1545
Kpn2I TCCGGA 1 cut(s) 1207
Ksp22I TGATCA 2 cut(s) 1224, 1393
LmnI GCTCC 6 cut(s) 124, 1057, 1969, 2016, 2338, 2632
LweI GCATC 6 cut(s) 418, 1003, 1432, 2041, 2587, 2846
MaeII ACGT 1 cut(s) 2477
MaeIII GTNAC 2 cut(s) 109, 2780
MboII GAAGA 8 cut(s) 461, 933, 1276, 1564, 2271, 2844, 2882, 2888
MfeI CAATTG 2 cut(s) 1128, 2658
MflI RGATCY 1 cut(s) 2612
MhlI GDGCHC 4 cut(s) 2013, 2164, 2216, 2593
Mly113I GGCGCC 2 cut(s) 1078, 1546
MlyI GAGTC 5 cut(s) 626, 647, 2170, 2399, 2612
MmeI TCCRAC 2 cut(s) 621, 1770
Mph1103I ATGCAT 1 cut(s) 1117
MroI TCCGGA 1 cut(s) 1207
MroXI GAANNNNTTC 3 cut(s) 763, 940, 1610
MseI TTAA 7 cut(s) 335, 399, 585, 1236, 1256, 1977, 2094
MslI CAYNNNNRTG 3 cut(s) 833, 2324, 2660
MspA1I CMGCKG 3 cut(s) 32, 1274, 2236
MspI CCGG 5 cut(s) 200, 670, 1208, 1620, 2771
MspR9I CCNGG 7 cut(s) 66, 1864, 1961, 2336, 2539, 2771, 2822
MunI CAATTG 2 cut(s) 1128, 2658
Mva1269I GAATGC 2 cut(s) 840, 1706
MvaI CCWGG 6 cut(s) 66, 1864, 1961, 2336, 2539, 2822
MvnI CGCG 3 cut(s) 2637, 2786, 2788
NarI GGCGCC 2 cut(s) 1078, 1546
NciI CCSGG 1 cut(s) 2771
NdeI CATATG 1 cut(s) 1171
NlaIV GGNNCC 6 cut(s) 778, 1079, 1547, 1965, 2331, 2340
NmeAIII GCCGAG 1 cut(s) 2626
NsiI ATGCAT 1 cut(s) 1117
NspI RCATGY 2 cut(s) 1652, 2102
NspV TTCGAA 1 cut(s) 832
OliI CACNNNNGTG 1 cut(s) 2660
PagI TCATGA 3 cut(s) 850, 1221, 1614
PauI GCGCGC 2 cut(s) 2635, 2786
PceI AGGCCT 2 cut(s) 424, 892
PctI GAATGC 2 cut(s) 840, 1706
PdmI GAANNNNTTC 3 cut(s) 763, 940, 1610
PfeI GAWTC 4 cut(s) 86, 104, 1756, 1881
PinAI ACCGGT 2 cut(s) 669, 1619
PleI GAGTC 5 cut(s) 626, 646, 2170, 2398, 2611
PluTI GGCGCC 2 cut(s) 1081, 1549
PpsI GAGTC 5 cut(s) 626, 646, 2170, 2398, 2611
PshAI GACNNNNGTC 1 cut(s) 2389
PshBI ATTAAT 1 cut(s) 1236
Psp124BI GAGCTC 2 cut(s) 2013, 2216
Psp1406I AACGTT 1 cut(s) 2477
Psp6I CCWGG 6 cut(s) 64, 1862, 1959, 2334, 2537, 2820
PspFI CCCAGC 2 cut(s) 592, 1670
PspGI CCWGG 6 cut(s) 64, 1862, 1959, 2334, 2537, 2820
PspN4I GGNNCC 6 cut(s) 778, 1079, 1547, 1965, 2331, 2340
PspPI GGNCC 6 cut(s) 73, 667, 1210, 1435, 1918, 2192
PstI CTGCAG 3 cut(s) 1528, 1755, 2062
PstNI CAGNNNCTG 2 cut(s) 2066, 2399
PsuI RGATCY 1 cut(s) 2612
PteI GCGCGC 2 cut(s) 2635, 2786
PvuII CAGCTG 2 cut(s) 32, 1274
RsaI GTAC 4 cut(s) 747, 1244, 1491, 2232
RsaNI GTAC 4 cut(s) 746, 1243, 1490, 2231
RseI CAYNNNNRTG 3 cut(s) 833, 2324, 2660
SacI GAGCTC 2 cut(s) 2013, 2216
SaqAI TTAA 7 cut(s) 335, 399, 585, 1236, 1256, 1977, 2094
Sau96I GGNCC 6 cut(s) 73, 667, 1210, 1435, 1918, 2192
ScaI AGTACT 1 cut(s) 1244
SchI GAGTC 5 cut(s) 626, 647, 2170, 2399, 2612
ScrFI CCNGG 7 cut(s) 66, 1864, 1961, 2336, 2539, 2771, 2822
SduI GDGCHC 4 cut(s) 2013, 2164, 2216, 2593
SfaNI GCATC 6 cut(s) 418, 1003, 1432, 2041, 2587, 2846
SfcI CTRYAG 3 cut(s) 1524, 1751, 2058
SfoI GGCGCC 2 cut(s) 1079, 1547
SfuI TTCGAA 1 cut(s) 832
SinI GGWCC 5 cut(s) 73, 667, 1210, 1918, 2192
SmiMI CAYNNNNRTG 3 cut(s) 833, 2324, 2660
SmlI CTYRAG 1 cut(s) 2300
SmoI CTYRAG 1 cut(s) 2300
SpeI ACTAGT 1 cut(s) 118
SseBI AGGCCT 2 cut(s) 424, 892
SsiI CCGC 3 cut(s) 709, 1590, 2236
SspDI GGCGCC 2 cut(s) 1077, 1545
SstI GAGCTC 2 cut(s) 2013, 2216
StuI AGGCCT 2 cut(s) 424, 892
StyD4I CCNGG 7 cut(s) 64, 1862, 1959, 2334, 2537, 2769, 2820
StyI CCWWGG 3 cut(s) 663, 1653, 2864
TaiI ACGT 1 cut(s) 2480
TaqI TCGA 5 cut(s) 832, 952, 1987, 2122, 2574
TaqII GACCGA 1 cut(s) 90
TatI WGTACW 4 cut(s) 745, 1242, 1489, 2230
TauI GCSGC 1 cut(s) 1592
TfiI GAWTC 4 cut(s) 86, 104, 1756, 1881
Tru1I TTAA 7 cut(s) 335, 399, 585, 1236, 1256, 1977, 2094
Tru9I TTAA 7 cut(s) 335, 399, 585, 1236, 1256, 1977, 2094
TscAI CASTG 6 cut(s) 88, 238, 256, 1198, 1528, 2067
TspGWI ACGGA 2 cut(s) 2147, 2289
TspRI CASTG 6 cut(s) 88, 238, 256, 1198, 1528, 2067
VneI GTGCAC 1 cut(s) 2589
VpaK11BI GGWCC 5 cut(s) 73, 667, 1210, 1918, 2192
VspI ATTAAT 1 cut(s) 1236
XapI RAATTY 2 cut(s) 937, 2496
XbaI TCTAGA 1 cut(s) 1036
XceI RCATGY 2 cut(s) 1652, 2102
XmiI GTMKAC 2 cut(s) 1197, 2103
XmnI GAANNNNTTC 3 cut(s) 763, 940, 1610
ZrmI AGTACT 1 cut(s) 1244
Zsp2I ATGCAT 1 cut(s) 1117
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.