No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g23070 |
| rosa_chinensis | RchiOBHm_Chr2g0132461 RchiOBHm_Chr5g0044431 RchiOBHm_Chr6g0278561 |
| rosa_laevigata | RLG00000018508 |
| rosa_multiflora | Rmu_sc0000159.1_g000019 Rmu_sc0000723.1_g000010 Rmu_sc0004935.1_g000033 |
| rosa_rugosa | Rorug05G0214000 |
| rosa_wichuraiana | Rw1G010270 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 191 |
| Acc36I | ACCTGC | 2 cut(s) | 68, 76 |
| AgsI | TTSAA | 1 cut(s) | 56 |
| AluBI | AGCT | 4 cut(s) | 9, 59, 94, 135 |
| AluI | AGCT | 4 cut(s) | 9, 59, 94, 135 |
| ApeKI | GCWGC | 2 cut(s) | 6, 135 |
| AsuHPI | GGTGA | 1 cut(s) | 178 |
| BbsI | GAAGAC | 1 cut(s) | 189 |
| BbvI | GCAGC | 2 cut(s) | 18, 122 |
| BceAI | ACGGC | 1 cut(s) | 199 |
| BclI | TGATCA | 1 cut(s) | 36 |
| BfmI | CTRYAG | 1 cut(s) | 69 |
| BfuAI | ACCTGC | 2 cut(s) | 68, 76 |
| BisI | GCNGC | 2 cut(s) | 7, 136 |
| BlsI | GCNGC | 2 cut(s) | 8, 137 |
| BmiI | GGNNCC | 1 cut(s) | 213 |
| BpiI | GAAGAC | 1 cut(s) | 189 |
| BpuEI | CTTGAG | 2 cut(s) | 116, 132 |
| BseGI | GGATG | 2 cut(s) | 39, 166 |
| BseRI | GAGGAG | 1 cut(s) | 51 |
| BseXI | GCAGC | 2 cut(s) | 18, 122 |
| BslFI | GGGAC | 1 cut(s) | 134 |
| BsmFI | GGGAC | 1 cut(s) | 134 |
| BsmI | GAATGC | 1 cut(s) | 13 |
| Bsp143I | GATC | 1 cut(s) | 36 |
| BspLI | GGNNCC | 1 cut(s) | 213 |
| BspMAI | CTGCAG | 1 cut(s) | 73 |
| BspMI | ACCTGC | 2 cut(s) | 68, 76 |
| BssMI | GATC | 1 cut(s) | 36 |
| BstC8I | GCNNGC | 1 cut(s) | 11 |
| BstF5I | GGATG | 2 cut(s) | 39, 166 |
| BstKTI | GATC | 1 cut(s) | 39 |
| BstMBI | GATC | 1 cut(s) | 36 |
| BstSFI | CTRYAG | 1 cut(s) | 69 |
| BstV1I | GCAGC | 2 cut(s) | 18, 122 |
| BstV2I | GAAGAC | 1 cut(s) | 189 |
| BtsCI | GGATG | 2 cut(s) | 39, 166 |
| BveI | ACCTGC | 2 cut(s) | 68, 76 |
| Cac8I | GCNNGC | 1 cut(s) | 11 |
| CviAII | CATG | 1 cut(s) | 112 |
| CviJI | RGCY | 5 cut(s) | 9, 59, 94, 135, 214 |
| CviKI_1 | RGCY | 5 cut(s) | 9, 59, 94, 135, 214 |
| DpnI | GATC | 1 cut(s) | 38 |
| DpnII | GATC | 1 cut(s) | 36 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 191 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 191 |
| FaeI | CATG | 1 cut(s) | 115 |
| FaiI | YATR | 5 cut(s) | 20, 30, 90, 113, 204 |
| FaqI | GGGAC | 1 cut(s) | 134 |
| FatI | CATG | 1 cut(s) | 111 |
| FbaI | TGATCA | 1 cut(s) | 36 |
| Fnu4HI | GCNGC | 2 cut(s) | 7, 136 |
| FokI | GGATG | 2 cut(s) | 26, 173 |
| Fsp4HI | GCNGC | 2 cut(s) | 7, 136 |
| GluI | GCNGC | 2 cut(s) | 7, 136 |
| Hin1II | CATG | 1 cut(s) | 115 |
| HphI | GGTGA | 1 cut(s) | 178 |
| Hpy188III | TCNNGA | 2 cut(s) | 149, 196 |
| HpyAV | CCTTC | 1 cut(s) | 202 |
| HpyCH4V | TGCA | 2 cut(s) | 71, 138 |
| Hsp92II | CATG | 1 cut(s) | 115 |
| Ksp22I | TGATCA | 1 cut(s) | 36 |
| Kzo9I | GATC | 1 cut(s) | 36 |
| LmnI | GCTCC | 2 cut(s) | 64, 211 |
| LpnPI | CCDG | 2 cut(s) | 63, 81 |
| Lsp1109I | GCAGC | 2 cut(s) | 18, 122 |
| MalI | GATC | 1 cut(s) | 38 |
| MboI | GATC | 1 cut(s) | 36 |
| MboII | GAAGA | 2 cut(s) | 164, 194 |
| MluCI | AATT | 1 cut(s) | 51 |
| MnlI | CCTC | 3 cut(s) | 72, 122, 157 |
| MspA1I | CMGCKG | 1 cut(s) | 9 |
| Mva1269I | GAATGC | 1 cut(s) | 13 |
| NdeII | GATC | 1 cut(s) | 36 |
| NlaIII | CATG | 1 cut(s) | 115 |
| NlaIV | GGNNCC | 1 cut(s) | 213 |
| PctI | GAATGC | 1 cut(s) | 13 |
| PkrI | GCNGC | 2 cut(s) | 8, 137 |
| PspN4I | GGNNCC | 1 cut(s) | 213 |
| PstI | CTGCAG | 1 cut(s) | 73 |
| PvuII | CAGCTG | 1 cut(s) | 9 |
| SatI | GCNGC | 2 cut(s) | 7, 136 |
| Sau3AI | GATC | 1 cut(s) | 36 |
| SetI | ASST | 9 cut(s) | 11, 29, 61, 70, 82, 96, 133, 137, 168 |
| SfcI | CTRYAG | 1 cut(s) | 69 |
| SgeI | CNNG | 9 cut(s) | 22, 46, 80, 90, 107, 124, 136, 161, 208 |
| SmlI | CTYRAG | 2 cut(s) | 95, 147 |
| SmoI | CTYRAG | 2 cut(s) | 95, 147 |
| Sse9I | AATT | 1 cut(s) | 51 |
| TasI | AATT | 1 cut(s) | 51 |
| TseI | GCWGC | 2 cut(s) | 6, 135 |