FvH4_6g23940

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0012276
Physical Location & Seq
Reverse (-)
17992582 .. 17994844
2263 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g23940.t1

Sequence Viewer

Length: 1587 bp
ATGGGCTTCACAGCCAAGCCTAAGAGTCCTAGCACCAGCACCTCCTCGTCCGGCGACAACTGGGGAATGGGTTTACTTCTAGTCTTCTTCCCTGCAGATAACTCCGCCAACGCCATTGTTGATAAAACCAACAAGCTCTTCTCTTCTTCTTCTTCTAGTTCTGCGTCTTCTTCAGCAACTTCCTCTCCCTCTTCTTCCTTCATCAAACGAACCAATTCCAACAACGTTCTTCTCTCCAAAGCCCAGTCCACCATTTCCATCTGTGCGCTTTTAGTTTTCATCACCCTCCTCCTCTTCACCCTCTCCACCTTCGAACCCAGCTCCAAAACCCACCCCTTCTCCACCGCTTCCAGAAGATTTCTCTCATCCCAGAATTCCAACGTCCCTGGTTTCAAGCCTAATAATGTCGTTTACACAAACGACAACCACAGCCTGCTCGTCTCTTCGTCTTGGTTCGGCAAAATGTGGAAGCAGAAACCCAACAGCAGCCGTAACCAGTTCGCTCTCCAGAGAATGGGGACTTTGTACAGGCGCGGGACTAAGGCCATGACCGATCTCGTCGTGGGTCATGTAGACGTGGACGTCACCGAACCAGAGCTCCGACTATTTCTCAGACTCTTGCACAGGTCCGGCCTCACCGCTCGCGCCGACATCGTCTTCATCTTCGCCTCATCAAAATTCCGGTCAGCAATCCAAGAGGAGAACGAGTACTTCCTAAACCTCGTCCGCCGTCACAGAGAATCGAACTCCACGACATCGACGAGTCAAACTAACCATAAACCCGGTTCTAGTTCGAGTTCCGGTTTCGATGTCAGTCAGTTTCTCAAACTTGGGAAGAAGGAAACTGAAGAGCCGCTGTGGGGCAAGAAGAGCAGTATACACAGCAATTCCAGTGATGAAACGGACCAGGCCGAGTCGACTCAGTTGATCTACGGCTCGGTGGTGGGGTTCGAGGTGGGCGAGCTTGACCCGGAGAACTCGCTGAGGGGGTTCCTAGACCATGTGGCGCCAATGAGTCTAAGAAGGTGGGCTTGTTACCCGATGCTACTCGGCCGCGTGCGGCGGAACTTCAAGCACATAATGCTCGTCGACGTCAAGAACTCGGTCGTACTCGGCGACCCACTAGGCCGAGTCAGGCACAAGAGCGCCGAGTCAGTCCTGCTGTCCACAATGCCCAACAAGCATTGCAGCAAGAAAATCTCGGACCCAACTCAGTCCCATTGCCCCGTTAACTCGGCAGTCATCACCGGCGGCGCTCGCGGAATTCGGCGAATGTCAACCACGGTGTTAACGGAAATCGTCAGAGCGGCCATGCAGCAGCAGCAGCAGCAGAGGAAGAGGAAGACCCCGGTTACCGAGTCGGGGATTCTGAGTCAACTCGTTGGGAACCAGTTCATATCGAAGAACATCAATTTGGTCACGTCCACCGACTCGATTCCGGACCCGAATTCAGTGGCACCTGGGTTGCTTTTATCCCACGCAGTAATTCAACGCGGATTAAAATTAGAGAATACAAAAAGGATGGAAGATCCAGCTTTTGATGCTGGATTGGTGGAGAAGGGCATTTGGCAAACAAGAAGCAGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

529

Amino Acids

58.07

Weight (kDa)

9.96

Isoelectric Point (pI)

50.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7780 PF25002 166 - 478 7.7e-135 Domain of unknown function (DUF7780)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012276)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G57400 AT5G52500
fragaria_vesca FvH4_6g23940
malus_domestica MD12G1074600.v1.1 MD14G1072700.v1.1
prunus_persica Prupe.7G058900_v2.0.a1
pyrus_communis pycom12g06420 pycom14g06260
rosa_chinensis RchiOBHm_Chr3g0482601
rosa_laevigata RLG00000023338
rosa_multiflora Rmu_sc0000224.1_g000003 Rmu_sc0004687.1_g000003
rosa_roxburghii Rroxscaffold_6G00399090
rosa_rugosa Rorug03G0197500
rosa_samantha Rh3AG248600 Rh3BG284100 Rh3CG281600 Rh3DG277800
rosa_wichuraiana Rw3G022450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 581
AatII GACGTC 2 cut(s) 585, 1095
AccB1I GGYRCC 2 cut(s) 1006, 1456
AccB7I CCANNNNNTGG 1 cut(s) 514
AccBSI CCGCTC 2 cut(s) 641, 1307
AccI GTMKAC 4 cut(s) 573, 877, 917, 1089
AccII CGCG 5 cut(s) 534, 645, 1056, 1260, 1494
AccIII TCCGGA 1 cut(s) 1438
AclI AACGTT 1 cut(s) 225
AclWI GGATC 1 cut(s) 1523
AcoI YGGCCR 2 cut(s) 1051, 1308
AcsI RAATTY 4 cut(s) 373, 677, 1263, 1447
AcuI CTGAAG 2 cut(s) 156, 867
AcyI GRCGYC 3 cut(s) 582, 1007, 1092
AfaI GTAC 3 cut(s) 527, 710, 1110
AfiI CCNNNNNNNGG 3 cut(s) 514, 860, 1362
AgsI TTSAA 3 cut(s) 394, 1072, 1490
AjiI CACGTC 2 cut(s) 577, 1422
AjnI CCWGG 3 cut(s) 385, 906, 1459
AjuI GAANNNNNNNTTGG 4 cut(s) 122, 154, 1397, 1429
AloI GAACNNNNNNTCC 2 cut(s) 582, 614
AluBI AGCT 6 cut(s) 136, 321, 598, 964, 1535, 1584
AluI AGCT 6 cut(s) 136, 321, 598, 964, 1535, 1584
Alw21I GWGCWC 1 cut(s) 600
Alw26I GTCTC 1 cut(s) 445
AlwI GGATC 1 cut(s) 1523
Aor13HI TCCGGA 1 cut(s) 1438
AoxI GGCC 6 cut(s) 543, 631, 909, 1051, 1126, 1308
ApeKI GCWGC 8 cut(s) 486, 1188, 1315, 1318, 1321, 1324, 1327, 1581
ApoI RAATTY 4 cut(s) 373, 677, 1263, 1447
ArsI GACNNNNNNTTYG 2 cut(s) 668, 700
Asp700I GAANNNNTTC 2 cut(s) 214, 1391
AspLEI GCGC 6 cut(s) 268, 534, 647, 1009, 1148, 1256
AspS9I GGNCC 4 cut(s) 627, 904, 1204, 1441
AsuC2I CCSGG 3 cut(s) 783, 971, 1349
AsuHPI GGTGA 5 cut(s) 274, 289, 577, 628, 1237
AsuII TTCGAA 1 cut(s) 312
AvaII GGWCC 4 cut(s) 627, 904, 1204, 1441
BanI GGYRCC 2 cut(s) 1006, 1456
BanII GRGCYC 1 cut(s) 600
BbsI GAAGAC 4 cut(s) 76, 159, 649, 1349
Bbv12I GWGCWC 1 cut(s) 600
BbvCI CCTCAGC 1 cut(s) 983
BbvI GCAGC 7 cut(s) 498, 1200, 1327, 1330, 1333, 1336, 1339
BccI CCATC 2 cut(s) 266, 1516
BceAI ACGGC 3 cut(s) 474, 714, 949
BciT130I CCWGG 3 cut(s) 387, 908, 1461
BcnI CCSGG 3 cut(s) 783, 971, 1349
BcoDI GTCTC 1 cut(s) 445
BfaI CTAG 6 cut(s) 30, 80, 156, 789, 995, 1124
BfmI CTRYAG 1 cut(s) 93
BfoI RGCGCY 3 cut(s) 1010, 1149, 1257
BmcAI AGTACT 1 cut(s) 710
Bme1390I CCNGG 6 cut(s) 387, 783, 908, 971, 1349, 1461
Bme18I GGWCC 4 cut(s) 627, 904, 1204, 1441
BmgBI CACGTC 2 cut(s) 577, 1422
BmgT120I GGNCC 4 cut(s) 627, 904, 1204, 1441
BmiI GGNNCC 6 cut(s) 992, 1008, 1206, 1388, 1443, 1458
BmrFI CCNGG 6 cut(s) 387, 783, 908, 971, 1349, 1461
BmrI ACTGGG 2 cut(s) 70, 238
BmsI GCATC 2 cut(s) 1032, 1531
BmuI ACTGGG 2 cut(s) 70, 238
BpiI GAAGAC 4 cut(s) 76, 159, 649, 1349
BpmI CTGGAG 1 cut(s) 491
Bpu10I CCTNAGC 1 cut(s) 983
Bpu14I TTCGAA 1 cut(s) 312
BpuMI CCSGG 3 cut(s) 783, 971, 1349
BsaHI GRCGYC 3 cut(s) 582, 1007, 1092
BsaJI CCNNGG 4 cut(s) 385, 1281, 1347, 1460
BsaWI WCCGGW 3 cut(s) 681, 800, 1438
BsaXI ACNNNNNCTCC 8 cut(s) 169, 199, 323, 353, 582, 612, 692, 722
Bsc4I CCNNNNNNNGG 3 cut(s) 514, 860, 1362
Bse118I RCCGGY 1 cut(s) 1247
Bse1I ACTGG 5 cut(s) 65, 244, 496, 891, 1390
Bse3DI GCAATG 2 cut(s) 1183, 1219
BseAI TCCGGA 1 cut(s) 1438
BseBI CCWGG 3 cut(s) 387, 908, 1461
BseDI CCNNGG 4 cut(s) 385, 1281, 1347, 1460
BseGI GGATG 2 cut(s) 365, 1527
BseLI CCNNNNNNNGG 3 cut(s) 514, 860, 1362
BseMI GCAATG 2 cut(s) 1183, 1219
BseMII CTCAG 5 cut(s) 625, 935, 974, 1226, 1361
BseNI ACTGG 5 cut(s) 65, 244, 496, 891, 1390
BseRI GAGGAG 4 cut(s) 34, 278, 281, 713
BseX3I CGGCCG 1 cut(s) 1051
BseXI GCAGC 7 cut(s) 498, 1200, 1327, 1330, 1333, 1336, 1339
BseYI CCCAGC 1 cut(s) 317
Bsh1236I CGCG 5 cut(s) 534, 645, 1056, 1260, 1494
Bsh1285I CGRYCG 2 cut(s) 1054, 1107
BshFI GGCC 6 cut(s) 545, 633, 911, 1053, 1128, 1310
BshNI GGYRCC 2 cut(s) 1006, 1456
BsiEI CGRYCG 2 cut(s) 1054, 1107
BsiHKAI GWGCWC 1 cut(s) 600
BsiSI CCGG 9 cut(s) 51, 630, 682, 783, 801, 971, 1248, 1349, 1439
BslFI GGGAC 4 cut(s) 368, 532, 550, 1201
BslI CCNNNNNNNGG 3 cut(s) 514, 860, 1362
BsmAI GTCTC 1 cut(s) 445
BsmBI CGTCTC 1 cut(s) 445
BsmFI GGGAC 4 cut(s) 368, 532, 550, 1201
BsnI GGCC 6 cut(s) 545, 633, 911, 1053, 1128, 1310
Bsp119I TTCGAA 1 cut(s) 312
Bsp1286I GDGCHC 1 cut(s) 600
Bsp13I TCCGGA 1 cut(s) 1438
Bsp1407I TGTACA 1 cut(s) 525
Bsp143I GATC 3 cut(s) 553, 927, 1528
BspANI GGCC 6 cut(s) 545, 633, 911, 1053, 1128, 1310
BspCNI CTCAG 5 cut(s) 624, 934, 975, 1225, 1362
BspEI TCCGGA 1 cut(s) 1438
BspFNI CGCG 5 cut(s) 534, 645, 1056, 1260, 1494
BspLI GGNNCC 6 cut(s) 992, 1008, 1206, 1388, 1443, 1458
BspMAI CTGCAG 1 cut(s) 97
BspPI GGATC 1 cut(s) 1523
BspQI GCTCTTC 3 cut(s) 143, 843, 863
BspT104I TTCGAA 1 cut(s) 312
BspT107I GGYRCC 2 cut(s) 1006, 1456
BsrBI CCGCTC 2 cut(s) 641, 1307
BsrDI GCAATG 2 cut(s) 1183, 1219
BsrFI RCCGGY 1 cut(s) 1247
BsrGI TGTACA 1 cut(s) 525
BsrI ACTGG 5 cut(s) 65, 244, 496, 891, 1390
BssAI RCCGGY 1 cut(s) 1247
BssECI CCNNGG 4 cut(s) 385, 1281, 1347, 1460
BssMI GATC 3 cut(s) 553, 927, 1528
BssNAI GTATAC 1 cut(s) 878
BssNI GRCGYC 3 cut(s) 582, 1007, 1092
Bst1107I GTATAC 1 cut(s) 878
Bst2UI CCWGG 3 cut(s) 387, 908, 1461
Bst4CI ACNGT 1 cut(s) 1285
Bst6I CTCTTC 8 cut(s) 143, 148, 196, 299, 448, 843, 863, 1331
BstACI GRCGYC 3 cut(s) 582, 1007, 1092
BstAPI GCANNNNNTGC 1 cut(s) 1081
BstAUI TGTACA 1 cut(s) 525
BstBI TTCGAA 1 cut(s) 312
BstC8I GCNNGC 5 cut(s) 434, 643, 962, 1058, 1258
BstDEI CTNAG 8 cut(s) 21, 540, 611, 921, 983, 1019, 1212, 1370
BstDSI CCRYGG 1 cut(s) 1281
BstEII GGTNACC 1 cut(s) 1351
BstF5I GGATG 2 cut(s) 365, 1527
BstFNI CGCG 5 cut(s) 534, 645, 1056, 1260, 1494
BstH2I RGCGCY 3 cut(s) 1010, 1149, 1257
BstHHI GCGC 6 cut(s) 268, 534, 647, 1009, 1148, 1256
BstKTI GATC 3 cut(s) 556, 930, 1531
BstMAI GTCTC 1 cut(s) 445
BstMBI GATC 3 cut(s) 553, 927, 1528
BstMCI CGRYCG 2 cut(s) 1054, 1107
BstMWI GCNNNNNNNGC 8 cut(s) 870, 1081, 1180, 1257, 1321, 1324, 1327, 1541
BstNI CCWGG 3 cut(s) 387, 908, 1461
BstPI GGTNACC 1 cut(s) 1351
BstSCI CCNGG 6 cut(s) 385, 781, 906, 969, 1347, 1459
BstSFI CTRYAG 1 cut(s) 93
BstUI CGCG 5 cut(s) 534, 645, 1056, 1260, 1494
BstV1I GCAGC 7 cut(s) 498, 1200, 1327, 1330, 1333, 1336, 1339
BstV2I GAAGAC 4 cut(s) 76, 159, 649, 1349
BstX2I RGATCY 1 cut(s) 1528
BstYI RGATCY 1 cut(s) 1528
BstZ17I GTATAC 1 cut(s) 878
BstZI CGGCCG 1 cut(s) 1051
BsuRI GGCC 6 cut(s) 545, 633, 911, 1053, 1128, 1310
BtgI CCRYGG 1 cut(s) 1281
BtrI CACGTC 2 cut(s) 577, 1422
BtsCI GGATG 2 cut(s) 365, 1527
BtsIMutI CAGTG 2 cut(s) 898, 1458
Cac8I GCNNGC 5 cut(s) 434, 643, 962, 1058, 1258
CfoI GCGC 6 cut(s) 268, 534, 647, 1009, 1148, 1256
Cfr10I RCCGGY 1 cut(s) 1247
Cfr13I GGNCC 4 cut(s) 627, 904, 1204, 1441
CseI GACGC 1 cut(s) 153
Csp6I GTAC 3 cut(s) 526, 709, 1109
CviAII CATG 4 cut(s) 547, 569, 1001, 1312
CviQI GTAC 3 cut(s) 526, 709, 1109
DdeI CTNAG 8 cut(s) 21, 540, 611, 921, 983, 1019, 1212, 1370
DinI GGCGCC 1 cut(s) 1008
DpnI GATC 3 cut(s) 555, 929, 1530
DpnII GATC 3 cut(s) 553, 927, 1528
DrdI GACNNNNNNGTC 1 cut(s) 581
DseDI GACNNNNNNGTC 1 cut(s) 581
EaeI YGGCCR 2 cut(s) 1051, 1308
EagI CGGCCG 1 cut(s) 1051
Eam1104I CTCTTC 8 cut(s) 143, 148, 196, 299, 448, 843, 863, 1331
EarI CTCTTC 8 cut(s) 143, 148, 196, 299, 448, 843, 863, 1331
EciI GGCGGA 3 cut(s) 94, 716, 1078
Ecl136II GAGCTC 1 cut(s) 598
EclXI CGGCCG 1 cut(s) 1051
Eco24I GRGCYC 1 cut(s) 600
Eco47I GGWCC 4 cut(s) 627, 904, 1204, 1441
Eco52I CGGCCG 1 cut(s) 1051
Eco53kI GAGCTC 1 cut(s) 598
Eco57I CTGAAG 2 cut(s) 156, 867
Eco91I GGTNACC 1 cut(s) 1351
EcoICRI GAGCTC 1 cut(s) 598
EcoO65I GGTNACC 1 cut(s) 1351
EcoRI GAATTC 3 cut(s) 373, 1263, 1447
EcoRII CCWGG 3 cut(s) 385, 906, 1459
EcoT38I GRGCYC 1 cut(s) 600
EgeI GGCGCC 1 cut(s) 1008
EheI GGCGCC 1 cut(s) 1008
Esp3I CGTCTC 1 cut(s) 445
FaeI CATG 4 cut(s) 550, 572, 1004, 1315
FaiI YATR 8 cut(s) 548, 570, 777, 878, 1002, 1079, 1313, 1397
FalI AAGNNNNNCTT 2 cut(s) 1015, 1047
FaqI GGGAC 4 cut(s) 368, 532, 550, 1201
FatI CATG 4 cut(s) 546, 568, 1000, 1311
FauI CCCGC 1 cut(s) 527
FblI GTMKAC 4 cut(s) 573, 877, 917, 1089
FokI GGATG 2 cut(s) 352, 1534
FriOI GRGCYC 1 cut(s) 600
FspBI CTAG 6 cut(s) 30, 80, 156, 789, 995, 1124
GlaI GCGC 6 cut(s) 267, 533, 646, 1008, 1147, 1255
GsaI CCCAGC 1 cut(s) 321
GsuI CTGGAG 1 cut(s) 491
HaeII RGCGCY 3 cut(s) 1010, 1149, 1257
HaeIII GGCC 6 cut(s) 545, 633, 911, 1053, 1128, 1310
HapII CCGG 9 cut(s) 51, 630, 682, 783, 801, 971, 1248, 1349, 1439
HgaI GACGC 1 cut(s) 153
HhaI GCGC 6 cut(s) 268, 534, 647, 1009, 1148, 1256
Hin1I GRCGYC 3 cut(s) 582, 1007, 1092
Hin1II CATG 4 cut(s) 550, 572, 1004, 1315
Hin6I GCGC 6 cut(s) 266, 532, 645, 1007, 1146, 1254
HinP1I GCGC 6 cut(s) 266, 532, 645, 1007, 1146, 1254
HincII GTYRAC 6 cut(s) 918, 1090, 1231, 1278, 1290, 1376
HindII GTYRAC 6 cut(s) 918, 1090, 1231, 1278, 1290, 1376
HpaI GTTAAC 2 cut(s) 1231, 1290
HpaII CCGG 9 cut(s) 51, 630, 682, 783, 801, 971, 1248, 1349, 1439
HphI GGTGA 5 cut(s) 274, 289, 577, 628, 1237
Hpy188I TCNGA 5 cut(s) 602, 614, 1204, 1304, 1371
Hpy188III TCNNGA 4 cut(s) 351, 508, 1096, 1439
Hpy99I CGWCG 4 cut(s) 563, 763, 1091, 1094
HpyAV CCTTC 6 cut(s) 208, 319, 346, 832, 1017, 1552
HpyCH4III ACNGT 1 cut(s) 1285
HpyCH4IV ACGT 6 cut(s) 225, 381, 576, 582, 1092, 1421
HpyCH4V TGCA 4 cut(s) 95, 622, 1188, 1315
HpyF10VI GCNNNNNNNGC 8 cut(s) 870, 1081, 1180, 1257, 1321, 1324, 1327, 1541
HpyF3I CTNAG 8 cut(s) 21, 540, 611, 921, 983, 1019, 1212, 1370
HpySE526I ACGT 6 cut(s) 225, 381, 576, 582, 1092, 1421
Hsp92I GRCGYC 3 cut(s) 582, 1007, 1092
Hsp92II CATG 4 cut(s) 550, 572, 1004, 1315
HspAI GCGC 6 cut(s) 266, 532, 645, 1007, 1146, 1254
KasI GGCGCC 1 cut(s) 1006
Kpn2I TCCGGA 1 cut(s) 1438
KspAI GTTAAC 2 cut(s) 1231, 1290
Kzo9I GATC 3 cut(s) 553, 927, 1528
LguI GCTCTTC 3 cut(s) 143, 843, 863
LmnI GCTCC 2 cut(s) 326, 603
Lsp1109I GCAGC 7 cut(s) 498, 1200, 1327, 1330, 1333, 1336, 1339
LweI GCATC 2 cut(s) 1032, 1531
MaeI CTAG 6 cut(s) 30, 80, 156, 789, 995, 1124
MaeII ACGT 6 cut(s) 225, 381, 576, 582, 1092, 1421
MaeIII GTNAC 6 cut(s) 491, 583, 731, 1034, 1351, 1417
MalI GATC 3 cut(s) 555, 929, 1530
MbiI CCGCTC 2 cut(s) 641, 1307
MboI GATC 3 cut(s) 553, 927, 1528
MflI RGATCY 1 cut(s) 1528
MhlI GDGCHC 1 cut(s) 600
MluCI AATT 9 cut(s) 214, 373, 677, 886, 1263, 1411, 1447, 1485, 1502
Mly113I GGCGCC 1 cut(s) 1007
MmeI TCCRAC 3 cut(s) 243, 402, 625
MroI TCCGGA 1 cut(s) 1438
MroXI GAANNNNTTC 2 cut(s) 214, 1391
MseI TTAA 3 cut(s) 1230, 1289, 1499
MspA1I CMGCKG 1 cut(s) 856
MspI CCGG 9 cut(s) 51, 630, 682, 783, 801, 971, 1248, 1349, 1439
MspR9I CCNGG 6 cut(s) 387, 783, 908, 971, 1349, 1461
MvaI CCWGG 3 cut(s) 387, 908, 1461
MvnI CGCG 5 cut(s) 534, 645, 1056, 1260, 1494
MwoI GCNNNNNNNGC 8 cut(s) 870, 1081, 1180, 1257, 1321, 1324, 1327, 1541
NarI GGCGCC 1 cut(s) 1007
NciI CCSGG 3 cut(s) 783, 971, 1349
NdeII GATC 3 cut(s) 553, 927, 1528
NlaIII CATG 4 cut(s) 550, 572, 1004, 1315
NlaIV GGNNCC 6 cut(s) 992, 1008, 1206, 1388, 1443, 1458
NmeAIII GCCGAG 6 cut(s) 937, 1029, 1092, 1154, 1174, 1214
NmuCI GTSAC 3 cut(s) 583, 731, 1417
NspV TTCGAA 1 cut(s) 312
PciSI GCTCTTC 3 cut(s) 143, 843, 863
PcsI WCGNNNNNNNCGW 4 cut(s) 749, 758, 957, 1113
PdmI GAANNNNTTC 2 cut(s) 214, 1391
PfeI GAWTC 3 cut(s) 740, 1366, 1435
PflFI GACNNNGTC 1 cut(s) 653
PflMI CCANNNNNTGG 1 cut(s) 514
PluTI GGCGCC 1 cut(s) 1010
Psp124BI GAGCTC 1 cut(s) 600
Psp1406I AACGTT 1 cut(s) 225
Psp6I CCWGG 3 cut(s) 385, 906, 1459
PspEI GGTNACC 1 cut(s) 1351
PspFI CCCAGC 1 cut(s) 317
PspGI CCWGG 3 cut(s) 385, 906, 1459
PspN4I GGNNCC 6 cut(s) 992, 1008, 1206, 1388, 1443, 1458
PspPI GGNCC 4 cut(s) 627, 904, 1204, 1441
PstI CTGCAG 1 cut(s) 97
PsuI RGATCY 1 cut(s) 1528
PsyI GACNNNGTC 1 cut(s) 653
RsaI GTAC 3 cut(s) 527, 710, 1110
RsaNI GTAC 3 cut(s) 526, 709, 1109
SacI GAGCTC 1 cut(s) 600
SalI GTCGAC 2 cut(s) 916, 1088
SapI GCTCTTC 3 cut(s) 143, 843, 863
SaqAI TTAA 3 cut(s) 1230, 1289, 1499
Sau3AI GATC 3 cut(s) 553, 927, 1528
Sau96I GGNCC 4 cut(s) 627, 904, 1204, 1441
ScaI AGTACT 1 cut(s) 710
ScrFI CCNGG 6 cut(s) 387, 783, 908, 971, 1349, 1461
SduI GDGCHC 1 cut(s) 600
SfaNI GCATC 2 cut(s) 1032, 1531
SfcI CTRYAG 1 cut(s) 93
SfoI GGCGCC 1 cut(s) 1008
SfuI TTCGAA 1 cut(s) 312
SgrAI CRCCGGYG 1 cut(s) 1247
SgrDI CGTCGACG 1 cut(s) 1088
SinI GGWCC 4 cut(s) 627, 904, 1204, 1441
Sse9I AATT 9 cut(s) 214, 373, 677, 886, 1263, 1411, 1447, 1485, 1502
SspDI GGCGCC 1 cut(s) 1006
SspMI CTAG 6 cut(s) 30, 80, 156, 789, 995, 1124
SstI GAGCTC 1 cut(s) 600
StyD4I CCNGG 6 cut(s) 385, 781, 906, 969, 1347, 1459
TaaI ACNGT 1 cut(s) 1285
TaiI ACGT 6 cut(s) 228, 384, 579, 585, 1095, 1424
TaqII GACCGA 2 cut(s) 566, 1093
TasI AATT 9 cut(s) 214, 373, 677, 886, 1263, 1411, 1447, 1485, 1502
TatI WGTACW 2 cut(s) 525, 708
TauI GCSGC 5 cut(s) 856, 1056, 1063, 1254, 1310
TfiI GAWTC 3 cut(s) 740, 1366, 1435
Tru1I TTAA 3 cut(s) 1230, 1289, 1499
Tru9I TTAA 3 cut(s) 1230, 1289, 1499
TscAI CASTG 2 cut(s) 898, 1458
TseFI GTSAC 3 cut(s) 583, 731, 1417
TseI GCWGC 8 cut(s) 486, 1188, 1315, 1318, 1321, 1324, 1327, 1581
Tsp45I GTSAC 3 cut(s) 583, 731, 1417
TspDTI ATGAA 5 cut(s) 190, 268, 649, 912, 1384
TspGWI ACGGA 2 cut(s) 917, 1307
TspRI CASTG 2 cut(s) 898, 1458
Tth111I GACNNNGTC 1 cut(s) 653
Van91I CCANNNNNTGG 1 cut(s) 514
VpaK11BI GGWCC 4 cut(s) 627, 904, 1204, 1441
XapI RAATTY 4 cut(s) 373, 677, 1263, 1447
XmiI GTMKAC 4 cut(s) 573, 877, 917, 1089
XmnI GAANNNNTTC 2 cut(s) 214, 1391
XspI CTAG 6 cut(s) 30, 80, 156, 789, 995, 1124
ZraI GACGTC 2 cut(s) 583, 1093
ZrmI AGTACT 1 cut(s) 710
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.