Rroxscaffold_6G00399090

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
OG0012276
Physical Location & Seq
Forward (+)
21000287 .. 21001858
1572 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00399090.1

Sequence Viewer

Length: 1572 bp
ATGGGCTTCACAGCCAAGCCAAAGAGCACCACTAGCAGTTCTCCTAGCAGTTCCGGCGAAAATTGGGGCATGGGTTTACTTCTAGTTTTCTTCCCCGAAGATAACACCGCCAACGCCATTGTTGATAAAAGCAACATGCTCTTCTCTTCTTCTTCTTCTTCAACAACATCCTCACCGTCCTCTTCCTTCAAACGAAGCAATTCCAATAATGTTCTTCTCTCAAAAGCTCAGTCCACCATTTCTATCTGTGCCCTTCTAGTCTTCATCACCCTCCTCCTCTTCACCCTCTCCACCTTCGAACCCAACTCCAAGACCCACCCATTCTCCACCGCTTCTAGAAGATTTCTCTCTCAGAATTCTCCACCGGCAAACACACAGAAAAACCCCGATTTCAAGCCCAGTAATGTCGTTTGCTCAAACACCAACCACAGTCTGCTGCTCTCTTCGTCTTGGTTCGGCAAAATGTGGAAGCAGAAAAAGCAGAAACTGCTCTATCCCAAAAGGAGCAATAACCAATTCGCTCTCCAGCGAATGGGCACTTTATACAGGCGCGGCACTAAAGCCATGACCGATCTTGTTGTGGGTCATGTAGACGTGGATGTCACCGAACCAGAGCTCCGACTGTTTATCAGACTCTTGCACAGGTCCGGCCTCACCGCTCGCGCCGACATCATCTTCATCTTCGCTTCTTCAACTTCAACAAAGTTCGGTTCAGCAATCCAAGAAGAGAACGAGTCGTTCTTGAACCTCGTCCGCCATTACAGCCAATCGAACATAACAAGTCCACAACACAAACCCACTTCCGGTTTCGATGTCACTCAGTTTCTCAAACTTGGGAAGAAGCAAACTGAAGAGCCGCTGTGGGGGAAGAGGAGTTTGCACAGCAATTCCAGTGAAGCGGACGCGGCCGAGTCGACTCGGTTGAGCTACGGGTCGGTGGTGGGGTTCGAGGTGGGCGAGCTTGACCCGGAGAACTCGCTGGATGGGTTCCTAGACCATGTGGCTCCAATGAGTCTACGAAGGTGGGCTTGTTACCCGATGCTACTCGGCCGCGTCCGACGAAATTTCAAGCATGTTATGCTGGTGGACGTCAAGAACTCGGTCGTACTCGGCGACCCACTCGGCCGAGTCAGGCACAAGAGGGCCGAGTTAGTTCTGTTATCCACAATGTCCAACAAGCATTGCAGCAAGAAAAACTCGGACCCAGCTCAGTCCCATTGCCCCGTTAACTCGGCCGTCATCACCGGCGGCGCTCGCGGAATTCGGCGAATGTCAGCCACGGTGTTAACGGAAATCGTCAGAGCGACTATGCAGCAGCAGAGGAAGAGGAAGAGCCCGGTGACCGAGGCGGGGATTCTGAGTCAACTCGTGGGGAACGCGTTCATATCGAAGAACATCAATTTGGTCACGTCCACCGAGTCGATCCCGGACCTGAGTTCACTGGCACCTGGGTCACTTTTATCCCACGCAGTAATTCAACGCGGTAATAGTAATCATGATGAACTTTATTCAATAATCATGAAGCAAATTTGTTTTTCAGAAATAGATTCTTCTGTCTATAGGGATTGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

523

Amino Acids

57.71

Weight (kDa)

9.76

Isoelectric Point (pI)

54.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7780 PF25002 172 - 474 1.3e-138 Domain of unknown function (DUF7780)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012276)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G57400 AT5G52500
fragaria_vesca FvH4_6g23940
malus_domestica MD12G1074600.v1.1 MD14G1072700.v1.1
prunus_persica Prupe.7G058900_v2.0.a1
pyrus_communis pycom12g06420 pycom14g06260
rosa_chinensis RchiOBHm_Chr3g0482601
rosa_laevigata RLG00000023338
rosa_multiflora Rmu_sc0000224.1_g000003 Rmu_sc0004687.1_g000003
rosa_roxburghii Rroxscaffold_6G00399090
rosa_rugosa Rorug03G0197500
rosa_samantha Rh3AG248600 Rh3BG284100 Rh3CG281600 Rh3DG277800
rosa_wichuraiana Rw3G022450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 599
AatII GACGTC 1 cut(s) 1092
AccB1I GGYRCC 1 cut(s) 1444
AccB7I CCANNNNNTGG 1 cut(s) 532
AccBSI CCGCTC 1 cut(s) 659
AccI GTMKAC 3 cut(s) 591, 914, 1015
AccII CGCG 7 cut(s) 552, 663, 905, 1053, 1257, 1379, 1482
AclWI GGATC 1 cut(s) 1417
AcoI YGGCCR 4 cut(s) 906, 1048, 1123, 1233
AcsI RAATTY 4 cut(s) 355, 1063, 1260, 1527
AcuI CTGAAG 1 cut(s) 870
AcyI GRCGYC 1 cut(s) 1089
AfaI GTAC 1 cut(s) 1107
AfiI CCNNNNNNNGG 4 cut(s) 532, 803, 863, 1350
AflIII ACRYGT 1 cut(s) 1377
AgsI TTSAA 9 cut(s) 162, 190, 394, 693, 699, 745, 1069, 1478, 1512
AjiI CACGTC 2 cut(s) 595, 1410
AjnI CCWGG 1 cut(s) 1447
AjuI GAANNNNNNNTTGG 2 cut(s) 1385, 1417
AloI GAACNNNNNNTCC 2 cut(s) 600, 632
AluBI AGCT 5 cut(s) 227, 616, 927, 961, 1208
AluI AGCT 5 cut(s) 227, 616, 927, 961, 1208
Alw21I GWGCWC 2 cut(s) 29, 618
AlwI GGATC 1 cut(s) 1417
AlwNI CAGNNNCTG 1 cut(s) 487
AoxI GGCC 6 cut(s) 649, 906, 1048, 1123, 1143, 1233
ApeKI GCWGC 4 cut(s) 436, 1185, 1312, 1315
ApoI RAATTY 4 cut(s) 355, 1063, 1260, 1527
ArsI GACNNNNNNTTYG 2 cut(s) 215, 247
Asp700I GAANNNNTTC 2 cut(s) 199, 1379
AspLEI GCGC 3 cut(s) 552, 665, 1253
AspS9I GGNCC 4 cut(s) 645, 1143, 1201, 1429
AsuC2I CCSGG 3 cut(s) 968, 1337, 1427
AsuHPI GGTGA 7 cut(s) 165, 259, 274, 595, 646, 1234, 1351
AsuII TTCGAA 1 cut(s) 297
AvaII GGWCC 3 cut(s) 645, 1201, 1429
BaeGI GKGCMC 2 cut(s) 253, 539
BanI GGYRCC 1 cut(s) 1444
BanII GRGCYC 2 cut(s) 618, 1337
BauI CACGAG 1 cut(s) 1367
BbsI GAAGAC 1 cut(s) 253
Bbv12I GWGCWC 2 cut(s) 29, 618
BbvI GCAGC 4 cut(s) 423, 1197, 1324, 1327
BccI CCATC 1 cut(s) 977
BceAI ACGGC 1 cut(s) 1220
BciT130I CCWGG 1 cut(s) 1449
BcnI CCSGG 3 cut(s) 968, 1337, 1427
BfaI CTAG 6 cut(s) 33, 45, 83, 257, 336, 992
BfmI CTRYAG 1 cut(s) 1558
BfoI RGCGCY 1 cut(s) 1254
BisI GCNGC 9 cut(s) 437, 553, 857, 906, 1051, 1186, 1249, 1313, 1316
BlsI GCNGC 9 cut(s) 438, 554, 858, 907, 1052, 1187, 1250, 1314, 1317
Bme1390I CCNGG 4 cut(s) 968, 1337, 1427, 1449
Bme18I GGWCC 3 cut(s) 645, 1201, 1429
BmgBI CACGTC 2 cut(s) 595, 1410
BmgT120I GGNCC 4 cut(s) 645, 1143, 1201, 1429
BmiI GGNNCC 4 cut(s) 989, 1005, 1203, 1446
BmrFI CCNGG 4 cut(s) 968, 1337, 1427, 1449
BmrI ACTGGG 1 cut(s) 393
BmsI GCATC 1 cut(s) 1029
BmuI ACTGGG 1 cut(s) 393
BpiI GAAGAC 1 cut(s) 253
BpmI CTGGAG 1 cut(s) 509
Bpu14I TTCGAA 1 cut(s) 297
BpuMI CCSGG 3 cut(s) 968, 1337, 1427
BsaHI GRCGYC 1 cut(s) 1089
BsaJI CCNNGG 3 cut(s) 1278, 1344, 1448
BsaWI WCCGGW 1 cut(s) 803
BsaXI ACNNNNNCTCC 4 cut(s) 308, 338, 600, 630
Bsc4I CCNNNNNNNGG 4 cut(s) 532, 803, 863, 1350
Bse118I RCCGGY 2 cut(s) 364, 1244
Bse1I ACTGG 3 cut(s) 399, 891, 1446
Bse3DI GCAATG 2 cut(s) 1180, 1216
BseBI CCWGG 1 cut(s) 1449
BseDI CCNNGG 3 cut(s) 1278, 1344, 1448
BseGI GGATG 3 cut(s) 167, 604, 988
BseLI CCNNNNNNNGG 4 cut(s) 532, 803, 863, 1350
BseMI GCAATG 2 cut(s) 1180, 1216
BseMII CTCAG 6 cut(s) 242, 365, 833, 1223, 1349, 1424
BseNI ACTGG 3 cut(s) 399, 891, 1446
BseRI GAGGAG 3 cut(s) 263, 266, 886
BseSI GKGCMC 2 cut(s) 253, 539
BseX3I CGGCCG 4 cut(s) 906, 1048, 1123, 1233
BseXI GCAGC 4 cut(s) 423, 1197, 1324, 1327
BseYI CCCAGC 1 cut(s) 1204
Bsh1236I CGCG 7 cut(s) 552, 663, 905, 1053, 1257, 1379, 1482
Bsh1285I CGRYCG 5 cut(s) 909, 1051, 1104, 1126, 1236
BshFI GGCC 6 cut(s) 651, 908, 1050, 1125, 1145, 1235
BshNI GGYRCC 1 cut(s) 1444
BsiEI CGRYCG 5 cut(s) 909, 1051, 1104, 1126, 1236
BsiHKAI GWGCWC 2 cut(s) 29, 618
BsiSI CCGG 8 cut(s) 54, 365, 648, 804, 968, 1245, 1337, 1427
BslFI GGGAC 1 cut(s) 1198
BslI CCNNNNNNNGG 4 cut(s) 532, 803, 863, 1350
BsmFI GGGAC 1 cut(s) 1198
BsnI GGCC 6 cut(s) 651, 908, 1050, 1125, 1145, 1235
Bsp119I TTCGAA 1 cut(s) 297
Bsp1286I GDGCHC 5 cut(s) 29, 253, 539, 618, 1337
Bsp143I GATC 2 cut(s) 571, 1422
BspANI GGCC 6 cut(s) 651, 908, 1050, 1125, 1145, 1235
BspCNI CTCAG 6 cut(s) 241, 364, 832, 1222, 1350, 1425
BspFNI CGCG 7 cut(s) 552, 663, 905, 1053, 1257, 1379, 1482
BspHI TCATGA 2 cut(s) 1495, 1518
BspLI GGNNCC 4 cut(s) 989, 1005, 1203, 1446
BspPI GGATC 1 cut(s) 1417
BspQI GCTCTTC 3 cut(s) 146, 846, 1325
BspT104I TTCGAA 1 cut(s) 297
BspT107I GGYRCC 1 cut(s) 1444
BsrBI CCGCTC 1 cut(s) 659
BsrDI GCAATG 2 cut(s) 1180, 1216
BsrFI RCCGGY 2 cut(s) 364, 1244
BsrI ACTGG 3 cut(s) 399, 891, 1446
BssAI RCCGGY 2 cut(s) 364, 1244
BssECI CCNNGG 3 cut(s) 1278, 1344, 1448
BssMI GATC 2 cut(s) 571, 1422
BssNI GRCGYC 1 cut(s) 1089
BssSI CACGAG 1 cut(s) 1367
Bst2BI CACGAG 1 cut(s) 1367
Bst2UI CCWGG 1 cut(s) 1449
Bst4CI ACNGT 4 cut(s) 177, 431, 624, 1282
BstACI GRCGYC 1 cut(s) 1089
BstAPI GCANNNNNTGC 2 cut(s) 487, 1078
BstBI TTCGAA 1 cut(s) 297
BstC8I GCNNGC 3 cut(s) 661, 959, 1255
BstDEI CTNAG 6 cut(s) 228, 351, 819, 1209, 1358, 1433
BstDSI CCRYGG 1 cut(s) 1278
BstEII GGTNACC 1 cut(s) 1339
BstF5I GGATG 3 cut(s) 167, 604, 988
BstFNI CGCG 7 cut(s) 552, 663, 905, 1053, 1257, 1379, 1482
BstH2I RGCGCY 1 cut(s) 1254
BstHHI GCGC 3 cut(s) 552, 665, 1253
BstKTI GATC 2 cut(s) 574, 1425
BstMBI GATC 2 cut(s) 571, 1422
BstMCI CGRYCG 5 cut(s) 909, 1051, 1104, 1126, 1236
BstMWI GCNNNNNNNGC 8 cut(s) 33, 54, 478, 487, 762, 905, 1078, 1254
BstNI CCWGG 1 cut(s) 1449
BstNSI RCATGY 2 cut(s) 139, 1076
BstPI GGTNACC 1 cut(s) 1339
BstSCI CCNGG 4 cut(s) 966, 1335, 1425, 1447
BstSFI CTRYAG 1 cut(s) 1558
BstSLI GKGCMC 2 cut(s) 253, 539
BstUI CGCG 7 cut(s) 552, 663, 905, 1053, 1257, 1379, 1482
BstV1I GCAGC 4 cut(s) 423, 1197, 1324, 1327
BstV2I GAAGAC 1 cut(s) 253
BstZI CGGCCG 4 cut(s) 906, 1048, 1123, 1233
BsuRI GGCC 6 cut(s) 651, 908, 1050, 1125, 1145, 1235
BtgI CCRYGG 1 cut(s) 1278
BtrI CACGTC 2 cut(s) 595, 1410
BtsCI GGATG 3 cut(s) 167, 604, 988
BtsIMutI CAGTG 2 cut(s) 898, 1439
Cac8I GCNNGC 3 cut(s) 661, 959, 1255
CaiI CAGNNNCTG 1 cut(s) 487
CciI TCATGA 2 cut(s) 1495, 1518
CfoI GCGC 3 cut(s) 552, 665, 1253
Cfr10I RCCGGY 2 cut(s) 364, 1244
Cfr13I GGNCC 4 cut(s) 645, 1143, 1201, 1429
CseI GACGC 2 cut(s) 911, 1042
Csp6I GTAC 1 cut(s) 1106
CviAII CATG 8 cut(s) 70, 136, 565, 587, 998, 1073, 1496, 1519
CviQI GTAC 1 cut(s) 1106
DdeI CTNAG 6 cut(s) 228, 351, 819, 1209, 1358, 1433
DpnI GATC 2 cut(s) 573, 1424
DpnII GATC 2 cut(s) 571, 1422
DrdI GACNNNNNNGTC 1 cut(s) 599
DseDI GACNNNNNNGTC 1 cut(s) 599
EaeI YGGCCR 4 cut(s) 906, 1048, 1123, 1233
EagI CGGCCG 4 cut(s) 906, 1048, 1123, 1233
EciI GGCGGA 1 cut(s) 743
Ecl136II GAGCTC 1 cut(s) 616
EclXI CGGCCG 4 cut(s) 906, 1048, 1123, 1233
Eco24I GRGCYC 2 cut(s) 618, 1337
Eco47I GGWCC 3 cut(s) 645, 1201, 1429
Eco52I CGGCCG 4 cut(s) 906, 1048, 1123, 1233
Eco53kI GAGCTC 1 cut(s) 616
Eco57I CTGAAG 1 cut(s) 870
Eco91I GGTNACC 1 cut(s) 1339
EcoICRI GAGCTC 1 cut(s) 616
EcoO65I GGTNACC 1 cut(s) 1339
EcoRI GAATTC 2 cut(s) 355, 1260
EcoRII CCWGG 1 cut(s) 1447
EcoT38I GRGCYC 2 cut(s) 618, 1337
FaeI CATG 8 cut(s) 73, 139, 568, 590, 1001, 1076, 1499, 1522
FalI AAGNNNNNCTT 2 cut(s) 1012, 1044
FaqI GGGAC 1 cut(s) 1198
FatI CATG 8 cut(s) 69, 135, 564, 586, 997, 1072, 1495, 1518
FauI CCCGC 1 cut(s) 1342
FblI GTMKAC 3 cut(s) 591, 914, 1015
Fnu4HI GCNGC 9 cut(s) 437, 553, 857, 906, 1051, 1186, 1249, 1313, 1316
FokI GGATG 3 cut(s) 154, 611, 995
FriOI GRGCYC 2 cut(s) 618, 1337
Fsp4HI GCNGC 9 cut(s) 437, 553, 857, 906, 1051, 1186, 1249, 1313, 1316
FspBI CTAG 6 cut(s) 33, 45, 83, 257, 336, 992
GlaI GCGC 3 cut(s) 551, 664, 1252
GluI GCNGC 9 cut(s) 437, 553, 857, 906, 1051, 1186, 1249, 1313, 1316
GsaI CCCAGC 1 cut(s) 1208
GsuI CTGGAG 1 cut(s) 509
HaeII RGCGCY 1 cut(s) 1254
HaeIII GGCC 6 cut(s) 651, 908, 1050, 1125, 1145, 1235
HapII CCGG 8 cut(s) 54, 365, 648, 804, 968, 1245, 1337, 1427
HgaI GACGC 2 cut(s) 911, 1042
HhaI GCGC 3 cut(s) 552, 665, 1253
Hin1I GRCGYC 1 cut(s) 1089
Hin1II CATG 8 cut(s) 73, 139, 568, 590, 1001, 1076, 1499, 1522
Hin6I GCGC 3 cut(s) 550, 663, 1251
HinP1I GCGC 3 cut(s) 550, 663, 1251
HincII GTYRAC 4 cut(s) 915, 1228, 1287, 1364
HindII GTYRAC 4 cut(s) 915, 1228, 1287, 1364
HpaI GTTAAC 2 cut(s) 1228, 1287
HpaII CCGG 8 cut(s) 54, 365, 648, 804, 968, 1245, 1337, 1427
HphI GGTGA 7 cut(s) 165, 259, 274, 595, 646, 1234, 1351
Hpy188I TCNGA 8 cut(s) 354, 620, 632, 1058, 1201, 1301, 1359, 1540
Hpy188III TCNNGA 5 cut(s) 336, 742, 1093, 1496, 1519
Hpy99I CGWCG 1 cut(s) 1062
HpyAV CCTTC 4 cut(s) 196, 263, 304, 1014
HpyCH4III ACNGT 4 cut(s) 177, 431, 624, 1282
HpyCH4IV ACGT 3 cut(s) 594, 1089, 1409
HpyCH4V TGCA 4 cut(s) 640, 880, 1185, 1312
HpyF10VI GCNNNNNNNGC 8 cut(s) 33, 54, 478, 487, 762, 905, 1078, 1254
HpyF3I CTNAG 6 cut(s) 228, 351, 819, 1209, 1358, 1433
HpySE526I ACGT 3 cut(s) 594, 1089, 1409
Hsp92I GRCGYC 1 cut(s) 1089
Hsp92II CATG 8 cut(s) 73, 139, 568, 590, 1001, 1076, 1499, 1522
HspAI GCGC 3 cut(s) 550, 663, 1251
KspAI GTTAAC 2 cut(s) 1228, 1287
Kzo9I GATC 2 cut(s) 571, 1422
LguI GCTCTTC 3 cut(s) 146, 846, 1325
LmnI GCTCC 3 cut(s) 504, 621, 1009
Lsp1109I GCAGC 4 cut(s) 423, 1197, 1324, 1327
LweI GCATC 1 cut(s) 1029
MaeI CTAG 6 cut(s) 33, 45, 83, 257, 336, 992
MaeII ACGT 3 cut(s) 594, 1089, 1409
MaeIII GTNAC 6 cut(s) 601, 814, 1031, 1339, 1405, 1452
MalI GATC 2 cut(s) 573, 1424
MbiI CCGCTC 1 cut(s) 659
MboI GATC 2 cut(s) 571, 1422
MhlI GDGCHC 5 cut(s) 29, 253, 539, 618, 1337
MluI ACGCGT 1 cut(s) 1377
MlyI GAGTC 8 cut(s) 627, 743, 910, 920, 1021, 1137, 1369, 1427
MmeI TCCRAC 3 cut(s) 643, 1081, 1197
MroXI GAANNNNTTC 2 cut(s) 199, 1379
MseI TTAA 2 cut(s) 1227, 1286
MspA1I CMGCKG 1 cut(s) 859
MspI CCGG 8 cut(s) 54, 365, 648, 804, 968, 1245, 1337, 1427
MspR9I CCNGG 4 cut(s) 968, 1337, 1427, 1449
MvaI CCWGG 1 cut(s) 1449
MvnI CGCG 7 cut(s) 552, 663, 905, 1053, 1257, 1379, 1482
MwoI GCNNNNNNNGC 8 cut(s) 33, 54, 478, 487, 762, 905, 1078, 1254
NciI CCSGG 3 cut(s) 968, 1337, 1427
NdeII GATC 2 cut(s) 571, 1422
NlaIII CATG 8 cut(s) 73, 139, 568, 590, 1001, 1076, 1499, 1522
NlaIV GGNNCC 4 cut(s) 989, 1005, 1203, 1446
NmeAIII GCCGAG 7 cut(s) 934, 1026, 1089, 1101, 1151, 1171, 1211
NmuCI GTSAC 5 cut(s) 601, 814, 1339, 1405, 1452
NspI RCATGY 2 cut(s) 139, 1076
NspV TTCGAA 1 cut(s) 297
PagI TCATGA 2 cut(s) 1495, 1518
PciSI GCTCTTC 3 cut(s) 146, 846, 1325
PcsI WCGNNNNNNNCGW 2 cut(s) 954, 1110
PdmI GAANNNNTTC 2 cut(s) 199, 1379
PfeI GAWTC 2 cut(s) 1354, 1547
PflMI CCANNNNNTGG 1 cut(s) 532
PfoI TCCNGGA 1 cut(s) 1425
PkrI GCNGC 9 cut(s) 438, 554, 858, 907, 1052, 1187, 1250, 1314, 1317
PleI GAGTC 8 cut(s) 627, 742, 910, 919, 1020, 1136, 1368, 1426
PpsI GAGTC 8 cut(s) 627, 742, 910, 919, 1020, 1136, 1368, 1426
Psp124BI GAGCTC 1 cut(s) 618
Psp6I CCWGG 1 cut(s) 1447
PspEI GGTNACC 1 cut(s) 1339
PspFI CCCAGC 1 cut(s) 1204
PspGI CCWGG 1 cut(s) 1447
PspN4I GGNNCC 4 cut(s) 989, 1005, 1203, 1446
PspPI GGNCC 4 cut(s) 645, 1143, 1201, 1429
PstNI CAGNNNCTG 1 cut(s) 487
RsaI GTAC 1 cut(s) 1107
RsaNI GTAC 1 cut(s) 1106
SacI GAGCTC 1 cut(s) 618
SalI GTCGAC 1 cut(s) 913
SapI GCTCTTC 3 cut(s) 146, 846, 1325
SaqAI TTAA 2 cut(s) 1227, 1286
SatI GCNGC 9 cut(s) 437, 553, 857, 906, 1051, 1186, 1249, 1313, 1316
Sau3AI GATC 2 cut(s) 571, 1422
Sau96I GGNCC 4 cut(s) 645, 1143, 1201, 1429
SchI GAGTC 8 cut(s) 627, 743, 910, 920, 1021, 1137, 1369, 1427
ScrFI CCNGG 4 cut(s) 968, 1337, 1427, 1449
SduI GDGCHC 5 cut(s) 29, 253, 539, 618, 1337
SfaNI GCATC 1 cut(s) 1029
SfcI CTRYAG 1 cut(s) 1558
SfuI TTCGAA 1 cut(s) 297
SgrAI CRCCGGYG 1 cut(s) 1244
SinI GGWCC 3 cut(s) 645, 1201, 1429
SspMI CTAG 6 cut(s) 33, 45, 83, 257, 336, 992
SstI GAGCTC 1 cut(s) 618
StyD4I CCNGG 4 cut(s) 966, 1335, 1425, 1447
TaaI ACNGT 4 cut(s) 177, 431, 624, 1282
TaiI ACGT 3 cut(s) 597, 1092, 1412
TaqI TCGA 7 cut(s) 297, 770, 810, 914, 948, 1388, 1421
TaqII GACCGA 3 cut(s) 584, 1090, 1358
TauI GCSGC 5 cut(s) 555, 859, 908, 1053, 1251
TfiI GAWTC 2 cut(s) 1354, 1547
Tru1I TTAA 2 cut(s) 1227, 1286
Tru9I TTAA 2 cut(s) 1227, 1286
TscAI CASTG 2 cut(s) 898, 1446
TseFI GTSAC 5 cut(s) 601, 814, 1339, 1405, 1452
TseI GCWGC 4 cut(s) 436, 1185, 1312, 1315
Tsp45I GTSAC 5 cut(s) 601, 814, 1339, 1405, 1452
TspDTI ATGAA 5 cut(s) 253, 667, 1372, 1515, 1535
TspGWI ACGGA 1 cut(s) 1304
TspRI CASTG 2 cut(s) 898, 1446
Van91I CCANNNNNTGG 1 cut(s) 532
VpaK11BI GGWCC 3 cut(s) 645, 1201, 1429
XapI RAATTY 4 cut(s) 355, 1063, 1260, 1527
XbaI TCTAGA 1 cut(s) 335
XceI RCATGY 2 cut(s) 139, 1076
XmiI GTMKAC 3 cut(s) 591, 914, 1015
XmnI GAANNNNTTC 2 cut(s) 199, 1379
XspI CTAG 6 cut(s) 33, 45, 83, 257, 336, 992
ZraI GACGTC 1 cut(s) 1090
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.