Rh3AG248600

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3A
OG0012276
Physical Location & Seq
Reverse (-)
26689277 .. 26691777
2501 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3AG248600.1

Sequence Viewer

Length: 1575 bp
ATGGGGTTTACAGCCAAGCCAAAGAGCACCACTAGCAGTTCTCCTGGCAGTTCCGGCGAAAATTGGGGCATGGGTTTACTTCTAGTCTTCTTCCCCGAAGATAACACCGCCAACGCCATTGTTGATAAAAGCAACATGCTCTTCTCTTCTTCTTCTTCTTCTTCAACAACATCCTCACCGTCATCTTCCTTCAAACGAAGCAATTCCAATAATGTTCTTCTCTCAAAAGCTCAGTCCACCATTTCTATCTGTGCCCTTCTAGTCTTCATCACCCTCCTCCTCTTCACCCTCTCCACCTTCGAACCCAACTCCAAAACCCACCCATTCTCCACCGCTTCTAGAAGATTTCTCTCTCAGAATTCTCCACCGGCAAACACAAAGAACAACCCCGATTTCAAGCCCAGTAATGTCGTCTACACAAACACGAACCACAGTCTGCTCCTCTCTTCGTCTTGGTTCGGCAAAATGTGGAAGCAGAAGAAGCAGAAACTGCTCTATCCCATAAGGAGCAATAACCAATTCGCTCTCCAGCGAATGGGCACTTTATACAGGCGCGGCACTAAAGCCATGACCGATCTTGTTGTGGGTCATGTAGACGTGGATGTCACCGAATCAGAGCTCCGACTGTTTATCAGACTCTTGCACAGGTCCGGCCTCACCGCTCGCGCCGACATCATCTTCATCTTCGCATCTTCAACTTCATCAAAGTTCGGTTCAGCAATCCAAGAAGAGAACGAGTCGTTCTTGAACCTCGTCCGGCATTACAGCCAATCGAACATAACAAGTCCACAACACAAACCCACTTCCGGTTTCGATGTCACTCAGTTTCTCAAACTTGGGAAGAAGCAAACTGAAGAGCCGCTGTGGGGGAAGAGGAGTATGCACAGCAATTCCAGTGAAGCGGACGCGGCCGAGTCGACTCGGTTGAGCTACGGGTCGGTGGTGGGGTTCGAGGTGGGCGAGCTTGACCCGGAGAACTCTCTGGATGGGTTCCTAGACCATGTGGCTCCAATGAGTCTACGAAGGTGGGCTTGTTACCCGATGCTACTAGGCCGCGTCCGACGAAATTTCAAGCATGTTATGCTGGTCGACGTCAAGAACTCGGTCGTACTGGGCGACCCACTCGGCCGAGTCAGGCACAAGAGCGCCGAGTCAGTTCTGTTATCCACAATGTCCAACAAGCATTGCAGCAAGAAAAACTCGGACCCAGCTCAGTCCCATTGCCCCGTTAACTCGGCCGTCATCACCGGCGGCGCTCGCGGAATTCGGCGAATGTCAGCCACGGTGTTAACGGAAATCGTCAGGGCGAGTATGCAGCAGCAGAGGAAGAGGAAGAGCCCCGTAACCGAGTCGGGGGTTCTGAGTCAACTCGTGGGGAACGAGTTCATATCGAAGAACATCAAGTTGGTCACTTCCACCGAGTCGATCCCGGACCCGAGTTCACTGGCACCTGGGTCACTTTTATCCCACGCAGTAATTCAACGCGGTAATACTAATCATGATGAACTTTATTCAATAATCATGAAGCAAATTTGTTCTTCAGAAATAGATTCTTCTGTCTATAGGGATTGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

524

Amino Acids

57.71

Weight (kDa)

9.69

Isoelectric Point (pI)

54.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7780 PF25002 173 - 475 9.2e-142 Domain of unknown function (DUF7780)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012276)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G57400 AT5G52500
fragaria_vesca FvH4_6g23940
malus_domestica MD12G1074600.v1.1 MD14G1072700.v1.1
prunus_persica Prupe.7G058900_v2.0.a1
pyrus_communis pycom12g06420 pycom14g06260
rosa_chinensis RchiOBHm_Chr3g0482601
rosa_laevigata RLG00000023338
rosa_multiflora Rmu_sc0000224.1_g000003 Rmu_sc0004687.1_g000003
rosa_roxburghii Rroxscaffold_6G00399090
rosa_rugosa Rorug03G0197500
rosa_samantha Rh3AG248600 Rh3BG284100 Rh3CG281600 Rh3DG277800
rosa_wichuraiana Rw3G022450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 602
AatII GACGTC 1 cut(s) 1095
AccB1I GGYRCC 1 cut(s) 1447
AccB7I CCANNNNNTGG 1 cut(s) 535
AccBSI CCGCTC 1 cut(s) 662
AccI GTMKAC 5 cut(s) 414, 594, 917, 1018, 1089
AccII CGCG 6 cut(s) 555, 666, 908, 1056, 1260, 1485
AclWI GGATC 1 cut(s) 1420
AcoI YGGCCR 3 cut(s) 909, 1126, 1236
AcsI RAATTY 4 cut(s) 358, 1066, 1263, 1530
AcuI CTGAAG 2 cut(s) 873, 1524
AcyI GRCGYC 1 cut(s) 1092
AfaI GTAC 1 cut(s) 1110
AfiI CCNNNNNNNGG 4 cut(s) 535, 806, 866, 1353
AgsI TTSAA 8 cut(s) 165, 193, 397, 696, 748, 1072, 1481, 1515
AjiI CACGTC 1 cut(s) 598
AjnI CCWGG 2 cut(s) 43, 1450
AjuI GAANNNNNNNTTGG 2 cut(s) 1388, 1420
AluBI AGCT 5 cut(s) 230, 619, 930, 964, 1211
AluI AGCT 5 cut(s) 230, 619, 930, 964, 1211
Alw21I GWGCWC 2 cut(s) 29, 621
AlwI GGATC 1 cut(s) 1420
AlwNI CAGNNNCTG 1 cut(s) 490
Ama87I CYCGRG 1 cut(s) 1435
AoxI GGCC 5 cut(s) 652, 909, 1051, 1126, 1236
ApeKI GCWGC 3 cut(s) 1188, 1315, 1318
ApoI RAATTY 4 cut(s) 358, 1066, 1263, 1530
ArsI GACNNNNNNTTYG 2 cut(s) 218, 250
Asp700I GAANNNNTTC 2 cut(s) 202, 1382
AspLEI GCGC 4 cut(s) 555, 668, 1148, 1256
AspS9I GGNCC 3 cut(s) 648, 1204, 1432
AsuC2I CCSGG 2 cut(s) 971, 1430
AsuHPI GGTGA 6 cut(s) 168, 262, 277, 598, 649, 1237
AsuII TTCGAA 1 cut(s) 300
AvaI CYCGRG 1 cut(s) 1435
AvaII GGWCC 3 cut(s) 648, 1204, 1432
BaeGI GKGCMC 2 cut(s) 256, 542
BanI GGYRCC 1 cut(s) 1447
BanII GRGCYC 2 cut(s) 621, 1340
BauI CACGAG 1 cut(s) 1370
BbsI GAAGAC 2 cut(s) 79, 256
Bbv12I GWGCWC 2 cut(s) 29, 621
BbvI GCAGC 3 cut(s) 1200, 1327, 1330
BccI CCATC 1 cut(s) 980
BceAI ACGGC 1 cut(s) 1223
BciT130I CCWGG 2 cut(s) 45, 1452
BcnI CCSGG 2 cut(s) 971, 1430
BfaI CTAG 6 cut(s) 33, 83, 260, 339, 995, 1049
BfmI CTRYAG 1 cut(s) 1561
BfoI RGCGCY 2 cut(s) 1149, 1257
BisI GCNGC 8 cut(s) 556, 860, 909, 1054, 1189, 1252, 1316, 1319
BlsI GCNGC 8 cut(s) 557, 861, 910, 1055, 1190, 1253, 1317, 1320
Bme1390I CCNGG 4 cut(s) 45, 971, 1430, 1452
Bme18I GGWCC 3 cut(s) 648, 1204, 1432
BmeT110I CYCGRG 1 cut(s) 1435
BmgBI CACGTC 1 cut(s) 598
BmgT120I GGNCC 3 cut(s) 648, 1204, 1432
BmiI GGNNCC 5 cut(s) 992, 1008, 1206, 1434, 1449
BmrFI CCNGG 4 cut(s) 45, 971, 1430, 1452
BmrI ACTGGG 2 cut(s) 396, 1121
BmsI GCATC 2 cut(s) 698, 1032
BmuI ACTGGG 2 cut(s) 396, 1121
BpiI GAAGAC 2 cut(s) 79, 256
BpmI CTGGAG 1 cut(s) 512
Bpu14I TTCGAA 1 cut(s) 300
BpuMI CCSGG 2 cut(s) 971, 1430
BsaHI GRCGYC 1 cut(s) 1092
BsaJI CCNNGG 2 cut(s) 1281, 1451
BsaWI WCCGGW 1 cut(s) 806
BsaXI ACNNNNNCTCC 2 cut(s) 311, 341
Bsc4I CCNNNNNNNGG 4 cut(s) 535, 806, 866, 1353
Bse118I RCCGGY 2 cut(s) 367, 1247
Bse1I ACTGG 4 cut(s) 402, 894, 1116, 1449
Bse3DI GCAATG 2 cut(s) 1183, 1219
BseBI CCWGG 2 cut(s) 45, 1452
BseDI CCNNGG 2 cut(s) 1281, 1451
BseGI GGATG 3 cut(s) 170, 607, 991
BseLI CCNNNNNNNGG 4 cut(s) 535, 806, 866, 1353
BseMI GCAATG 2 cut(s) 1183, 1219
BseMII CTCAG 5 cut(s) 245, 368, 836, 1226, 1352
BseNI ACTGG 4 cut(s) 402, 894, 1116, 1449
BseRI GAGGAG 4 cut(s) 266, 269, 431, 889
BseSI GKGCMC 2 cut(s) 256, 542
BseX3I CGGCCG 3 cut(s) 909, 1126, 1236
BseXI GCAGC 3 cut(s) 1200, 1327, 1330
BseYI CCCAGC 1 cut(s) 1207
Bsh1236I CGCG 6 cut(s) 555, 666, 908, 1056, 1260, 1485
Bsh1285I CGRYCG 4 cut(s) 912, 1107, 1129, 1239
BshFI GGCC 5 cut(s) 654, 911, 1053, 1128, 1238
BshNI GGYRCC 1 cut(s) 1447
BsiEI CGRYCG 4 cut(s) 912, 1107, 1129, 1239
BsiHKAI GWGCWC 2 cut(s) 29, 621
BsiHKCI CYCGRG 1 cut(s) 1435
BsiSI CCGG 8 cut(s) 54, 368, 651, 757, 807, 971, 1248, 1430
BslFI GGGAC 1 cut(s) 1201
BslI CCNNNNNNNGG 4 cut(s) 535, 806, 866, 1353
BsmFI GGGAC 1 cut(s) 1201
BsnI GGCC 5 cut(s) 654, 911, 1053, 1128, 1238
BsoBI CYCGRG 1 cut(s) 1435
Bsp119I TTCGAA 1 cut(s) 300
Bsp1286I GDGCHC 5 cut(s) 29, 256, 542, 621, 1340
Bsp143I GATC 2 cut(s) 574, 1425
BspANI GGCC 5 cut(s) 654, 911, 1053, 1128, 1238
BspCNI CTCAG 5 cut(s) 244, 367, 835, 1225, 1353
BspFNI CGCG 6 cut(s) 555, 666, 908, 1056, 1260, 1485
BspHI TCATGA 2 cut(s) 1498, 1521
BspLI GGNNCC 5 cut(s) 992, 1008, 1206, 1434, 1449
BspPI GGATC 1 cut(s) 1420
BspQI GCTCTTC 3 cut(s) 146, 849, 1328
BspT104I TTCGAA 1 cut(s) 300
BspT107I GGYRCC 1 cut(s) 1447
BsrBI CCGCTC 1 cut(s) 662
BsrDI GCAATG 2 cut(s) 1183, 1219
BsrFI RCCGGY 2 cut(s) 367, 1247
BsrI ACTGG 4 cut(s) 402, 894, 1116, 1449
BssAI RCCGGY 2 cut(s) 367, 1247
BssECI CCNNGG 2 cut(s) 1281, 1451
BssMI GATC 2 cut(s) 574, 1425
BssNI GRCGYC 1 cut(s) 1092
BssSI CACGAG 1 cut(s) 1370
Bst2BI CACGAG 1 cut(s) 1370
Bst2UI CCWGG 2 cut(s) 45, 1452
Bst4CI ACNGT 4 cut(s) 180, 434, 627, 1285
Bst6I CTCTTC 9 cut(s) 146, 151, 287, 451, 723, 849, 866, 1322, 1328
BstACI GRCGYC 1 cut(s) 1092
BstAPI GCANNNNNTGC 2 cut(s) 490, 1081
BstBI TTCGAA 1 cut(s) 300
BstC8I GCNNGC 3 cut(s) 664, 962, 1258
BstDEI CTNAG 5 cut(s) 231, 354, 822, 1212, 1361
BstDSI CCRYGG 1 cut(s) 1281
BstF5I GGATG 3 cut(s) 170, 607, 991
BstFNI CGCG 6 cut(s) 555, 666, 908, 1056, 1260, 1485
BstH2I RGCGCY 2 cut(s) 1149, 1257
BstHHI GCGC 4 cut(s) 555, 668, 1148, 1256
BstKTI GATC 2 cut(s) 577, 1428
BstMBI GATC 2 cut(s) 574, 1425
BstMCI CGRYCG 4 cut(s) 912, 1107, 1129, 1239
BstMWI GCNNNNNNNGC 7 cut(s) 33, 54, 481, 490, 908, 1081, 1257
BstNI CCWGG 2 cut(s) 45, 1452
BstNSI RCATGY 2 cut(s) 139, 1079
BstSCI CCNGG 4 cut(s) 43, 969, 1428, 1450
BstSFI CTRYAG 1 cut(s) 1561
BstSLI GKGCMC 2 cut(s) 256, 542
BstUI CGCG 6 cut(s) 555, 666, 908, 1056, 1260, 1485
BstV1I GCAGC 3 cut(s) 1200, 1327, 1330
BstV2I GAAGAC 2 cut(s) 79, 256
BstZI CGGCCG 3 cut(s) 909, 1126, 1236
BsuRI GGCC 5 cut(s) 654, 911, 1053, 1128, 1238
BtgI CCRYGG 1 cut(s) 1281
BtrI CACGTC 1 cut(s) 598
BtsCI GGATG 3 cut(s) 170, 607, 991
BtsIMutI CAGTG 2 cut(s) 901, 1442
Cac8I GCNNGC 3 cut(s) 664, 962, 1258
CaiI CAGNNNCTG 1 cut(s) 490
CciI TCATGA 2 cut(s) 1498, 1521
CfoI GCGC 4 cut(s) 555, 668, 1148, 1256
Cfr10I RCCGGY 2 cut(s) 367, 1247
Cfr13I GGNCC 3 cut(s) 648, 1204, 1432
CseI GACGC 2 cut(s) 914, 1045
Csp6I GTAC 1 cut(s) 1109
CviAII CATG 8 cut(s) 70, 136, 568, 590, 1001, 1076, 1499, 1522
CviQI GTAC 1 cut(s) 1109
DdeI CTNAG 5 cut(s) 231, 354, 822, 1212, 1361
DpnI GATC 2 cut(s) 576, 1427
DpnII GATC 2 cut(s) 574, 1425
DrdI GACNNNNNNGTC 1 cut(s) 602
DseDI GACNNNNNNGTC 1 cut(s) 602
EaeI YGGCCR 3 cut(s) 909, 1126, 1236
EagI CGGCCG 3 cut(s) 909, 1126, 1236
Eam1104I CTCTTC 9 cut(s) 146, 151, 287, 451, 723, 849, 866, 1322, 1328
EarI CTCTTC 9 cut(s) 146, 151, 287, 451, 723, 849, 866, 1322, 1328
Ecl136II GAGCTC 1 cut(s) 619
EclXI CGGCCG 3 cut(s) 909, 1126, 1236
Eco24I GRGCYC 2 cut(s) 621, 1340
Eco47I GGWCC 3 cut(s) 648, 1204, 1432
Eco52I CGGCCG 3 cut(s) 909, 1126, 1236
Eco53kI GAGCTC 1 cut(s) 619
Eco57I CTGAAG 2 cut(s) 873, 1524
Eco88I CYCGRG 1 cut(s) 1435
EcoICRI GAGCTC 1 cut(s) 619
EcoRI GAATTC 2 cut(s) 358, 1263
EcoRII CCWGG 2 cut(s) 43, 1450
EcoT38I GRGCYC 2 cut(s) 621, 1340
FaeI CATG 8 cut(s) 73, 139, 571, 593, 1004, 1079, 1502, 1525
FalI AAGNNNNNCTT 2 cut(s) 1015, 1047
FaqI GGGAC 1 cut(s) 1201
FatI CATG 8 cut(s) 69, 135, 567, 589, 1000, 1075, 1498, 1521
FblI GTMKAC 5 cut(s) 414, 594, 917, 1018, 1089
Fnu4HI GCNGC 8 cut(s) 556, 860, 909, 1054, 1189, 1252, 1316, 1319
FokI GGATG 3 cut(s) 157, 614, 998
FriOI GRGCYC 2 cut(s) 621, 1340
Fsp4HI GCNGC 8 cut(s) 556, 860, 909, 1054, 1189, 1252, 1316, 1319
FspBI CTAG 6 cut(s) 33, 83, 260, 339, 995, 1049
GlaI GCGC 4 cut(s) 554, 667, 1147, 1255
GluI GCNGC 8 cut(s) 556, 860, 909, 1054, 1189, 1252, 1316, 1319
GsaI CCCAGC 1 cut(s) 1211
GsuI CTGGAG 1 cut(s) 512
HaeII RGCGCY 2 cut(s) 1149, 1257
HaeIII GGCC 5 cut(s) 654, 911, 1053, 1128, 1238
HapII CCGG 8 cut(s) 54, 368, 651, 757, 807, 971, 1248, 1430
HgaI GACGC 2 cut(s) 914, 1045
HhaI GCGC 4 cut(s) 555, 668, 1148, 1256
Hin1I GRCGYC 1 cut(s) 1092
Hin1II CATG 8 cut(s) 73, 139, 571, 593, 1004, 1079, 1502, 1525
Hin6I GCGC 4 cut(s) 553, 666, 1146, 1254
HinP1I GCGC 4 cut(s) 553, 666, 1146, 1254
HincII GTYRAC 5 cut(s) 918, 1090, 1231, 1290, 1367
HindII GTYRAC 5 cut(s) 918, 1090, 1231, 1290, 1367
HpaI GTTAAC 2 cut(s) 1231, 1290
HpaII CCGG 8 cut(s) 54, 368, 651, 757, 807, 971, 1248, 1430
HphI GGTGA 6 cut(s) 168, 262, 277, 598, 649, 1237
Hpy188I TCNGA 8 cut(s) 357, 616, 623, 635, 1061, 1204, 1362, 1543
Hpy188III TCNNGA 6 cut(s) 339, 745, 983, 1096, 1499, 1522
Hpy99I CGWCG 2 cut(s) 1065, 1094
HpyAV CCTTC 4 cut(s) 199, 266, 307, 1017
HpyCH4III ACNGT 4 cut(s) 180, 434, 627, 1285
HpyCH4IV ACGT 2 cut(s) 597, 1092
HpyCH4V TGCA 4 cut(s) 643, 883, 1188, 1315
HpyF10VI GCNNNNNNNGC 7 cut(s) 33, 54, 481, 490, 908, 1081, 1257
HpyF3I CTNAG 5 cut(s) 231, 354, 822, 1212, 1361
HpySE526I ACGT 2 cut(s) 597, 1092
Hsp92I GRCGYC 1 cut(s) 1092
Hsp92II CATG 8 cut(s) 73, 139, 571, 593, 1004, 1079, 1502, 1525
HspAI GCGC 4 cut(s) 553, 666, 1146, 1254
KspAI GTTAAC 2 cut(s) 1231, 1290
Kzo9I GATC 2 cut(s) 574, 1425
LguI GCTCTTC 3 cut(s) 146, 849, 1328
LmnI GCTCC 4 cut(s) 444, 507, 624, 1012
Lsp1109I GCAGC 3 cut(s) 1200, 1327, 1330
LweI GCATC 2 cut(s) 698, 1032
MaeI CTAG 6 cut(s) 33, 83, 260, 339, 995, 1049
MaeII ACGT 2 cut(s) 597, 1092
MaeIII GTNAC 6 cut(s) 604, 817, 1034, 1342, 1408, 1455
MalI GATC 2 cut(s) 576, 1427
MbiI CCGCTC 1 cut(s) 662
MboI GATC 2 cut(s) 574, 1425
MhlI GDGCHC 5 cut(s) 29, 256, 542, 621, 1340
MluCI AATT 9 cut(s) 61, 202, 358, 518, 889, 1066, 1263, 1476, 1530
MmeI TCCRAC 3 cut(s) 646, 1084, 1200
MroXI GAANNNNTTC 2 cut(s) 202, 1382
MseI TTAA 2 cut(s) 1230, 1289
MspA1I CMGCKG 1 cut(s) 862
MspI CCGG 8 cut(s) 54, 368, 651, 757, 807, 971, 1248, 1430
MspR9I CCNGG 4 cut(s) 45, 971, 1430, 1452
MvaI CCWGG 2 cut(s) 45, 1452
MvnI CGCG 6 cut(s) 555, 666, 908, 1056, 1260, 1485
MwoI GCNNNNNNNGC 7 cut(s) 33, 54, 481, 490, 908, 1081, 1257
NciI CCSGG 2 cut(s) 971, 1430
NdeII GATC 2 cut(s) 574, 1425
NlaIII CATG 8 cut(s) 73, 139, 571, 593, 1004, 1079, 1502, 1525
NlaIV GGNNCC 5 cut(s) 992, 1008, 1206, 1434, 1449
NmeAIII GCCGAG 5 cut(s) 937, 1104, 1154, 1174, 1214
NmuCI GTSAC 4 cut(s) 604, 817, 1408, 1455
NspI RCATGY 2 cut(s) 139, 1079
NspV TTCGAA 1 cut(s) 300
PagI TCATGA 2 cut(s) 1498, 1521
PciSI GCTCTTC 3 cut(s) 146, 849, 1328
PcsI WCGNNNNNNNCGW 3 cut(s) 957, 1113, 1377
PdmI GAANNNNTTC 2 cut(s) 202, 1382
PfeI GAWTC 2 cut(s) 611, 1550
PflMI CCANNNNNTGG 1 cut(s) 535
PfoI TCCNGGA 1 cut(s) 1428
PkrI GCNGC 8 cut(s) 557, 861, 910, 1055, 1190, 1253, 1317, 1320
Psp124BI GAGCTC 1 cut(s) 621
Psp6I CCWGG 2 cut(s) 43, 1450
PspFI CCCAGC 1 cut(s) 1207
PspGI CCWGG 2 cut(s) 43, 1450
PspN4I GGNNCC 5 cut(s) 992, 1008, 1206, 1434, 1449
PspPI GGNCC 3 cut(s) 648, 1204, 1432
PstNI CAGNNNCTG 1 cut(s) 490
RsaI GTAC 1 cut(s) 1110
RsaNI GTAC 1 cut(s) 1109
SacI GAGCTC 1 cut(s) 621
SalI GTCGAC 2 cut(s) 916, 1088
SapI GCTCTTC 3 cut(s) 146, 849, 1328
SaqAI TTAA 2 cut(s) 1230, 1289
SatI GCNGC 8 cut(s) 556, 860, 909, 1054, 1189, 1252, 1316, 1319
Sau3AI GATC 2 cut(s) 574, 1425
Sau96I GGNCC 3 cut(s) 648, 1204, 1432
ScrFI CCNGG 4 cut(s) 45, 971, 1430, 1452
SduI GDGCHC 5 cut(s) 29, 256, 542, 621, 1340
SfaNI GCATC 2 cut(s) 698, 1032
SfcI CTRYAG 1 cut(s) 1561
SfuI TTCGAA 1 cut(s) 300
SgrAI CRCCGGYG 1 cut(s) 1247
SinI GGWCC 3 cut(s) 648, 1204, 1432
Sse9I AATT 9 cut(s) 61, 202, 358, 518, 889, 1066, 1263, 1476, 1530
SspMI CTAG 6 cut(s) 33, 83, 260, 339, 995, 1049
SstI GAGCTC 1 cut(s) 621
StyD4I CCNGG 4 cut(s) 43, 969, 1428, 1450
TaaI ACNGT 4 cut(s) 180, 434, 627, 1285
TaiI ACGT 2 cut(s) 600, 1095
TaqI TCGA 8 cut(s) 300, 773, 813, 917, 951, 1089, 1391, 1424
TaqII GACCGA 2 cut(s) 587, 1093
TasI AATT 9 cut(s) 61, 202, 358, 518, 889, 1066, 1263, 1476, 1530
TauI GCSGC 5 cut(s) 558, 862, 911, 1056, 1254
TfiI GAWTC 2 cut(s) 611, 1550
Tru1I TTAA 2 cut(s) 1230, 1289
Tru9I TTAA 2 cut(s) 1230, 1289
TscAI CASTG 2 cut(s) 901, 1449
TseFI GTSAC 4 cut(s) 604, 817, 1408, 1455
TseI GCWGC 3 cut(s) 1188, 1315, 1318
Tsp45I GTSAC 4 cut(s) 604, 817, 1408, 1455
TspDTI ATGAA 6 cut(s) 256, 670, 690, 1375, 1518, 1538
TspGWI ACGGA 1 cut(s) 1307
TspRI CASTG 2 cut(s) 901, 1449
Van91I CCANNNNNTGG 1 cut(s) 535
VpaK11BI GGWCC 3 cut(s) 648, 1204, 1432
XapI RAATTY 4 cut(s) 358, 1066, 1263, 1530
XbaI TCTAGA 1 cut(s) 338
XceI RCATGY 2 cut(s) 139, 1079
XmiI GTMKAC 5 cut(s) 414, 594, 917, 1018, 1089
XmnI GAANNNNTTC 2 cut(s) 202, 1382
XspI CTAG 6 cut(s) 33, 83, 260, 339, 995, 1049
ZraI GACGTC 1 cut(s) 1093
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.