Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G41680 |
| fragaria_vesca | FvH4_6g24270 FvH4_6g24270 FvH4_6g24270 |
| malus_domestica | MD00G1191800.v1.1 MD12G1076500.v1.1 |
| prunus_persica | Prupe.7G056500_v2.0.a1 |
| pyrus_communis | pycom12g06610 |
| rosa_chinensis | RchiOBHm_Chr3g0482921 |
| rosa_laevigata | RLG00000023317 |
| rosa_multiflora | Rmu_ssc0000175.1_g000017 |
| rosa_roxburghii | Rroxscaffold_6G00398840 |
| rosa_rugosa | Rorug03G0202100 |
| rosa_samantha | Rh3BG287500 Rh3BG287600 Rh3CG284900 Rh3DG280600 |
| rosa_wichuraiana | Rw3G022630 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 238 |
| AatII | GACGTC | 1 cut(s) | 595 |
| Acc36I | ACCTGC | 2 cut(s) | 238, 1115 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 991, 1355 |
| AccBSI | CCGCTC | 2 cut(s) | 77, 460 |
| AccII | CGCG | 3 cut(s) | 132, 204, 305 |
| AccIII | TCCGGA | 1 cut(s) | 424 |
| AcsI | RAATTY | 3 cut(s) | 391, 617, 1403 |
| AcuI | CTGAAG | 4 cut(s) | 219, 341, 1041, 1230 |
| AcyI | GRCGYC | 3 cut(s) | 33, 592, 1536 |
| AdeI | CACNNNGTG | 1 cut(s) | 1490 |
| AfaI | GTAC | 5 cut(s) | 734, 1089, 1307, 1419, 1483 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 236, 462, 991, 1355 |
| AflIII | ACRYGT | 2 cut(s) | 754, 1352 |
| AgsI | TTSAA | 8 cut(s) | 820, 847, 941, 1064, 1375, 1430, 1504, 1571 |
| AluBI | AGCT | 6 cut(s) | 367, 470, 728, 1009, 1112, 1460 |
| AluI | AGCT | 6 cut(s) | 367, 470, 728, 1009, 1112, 1460 |
| Alw26I | GTCTC | 2 cut(s) | 599, 848 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 857, 1130 |
| Aor13HI | TCCGGA | 1 cut(s) | 424 |
| AoxI | GGCC | 5 cut(s) | 453, 515, 883, 967, 1282 |
| ApeKI | GCWGC | 6 cut(s) | 5, 364, 1076, 1121, 1142, 1466 |
| ApoI | RAATTY | 3 cut(s) | 391, 617, 1403 |
| AseI | ATTAAT | 1 cut(s) | 902 |
| AspLEI | GCGC | 2 cut(s) | 134, 206 |
| AspS9I | GGNCC | 8 cut(s) | 275, 353, 422, 516, 883, 1093, 1282, 1358 |
| AsuC2I | CCSGG | 2 cut(s) | 357, 399 |
| AsuHPI | GGTGA | 8 cut(s) | 44, 185, 271, 719, 826, 966, 1187, 1405 |
| AvaII | GGWCC | 5 cut(s) | 275, 353, 422, 1093, 1358 |
| AxyI | CCTNAGG | 1 cut(s) | 408 |
| BbvCI | CCTCAGC | 1 cut(s) | 1461 |
| BbvI | GCAGC | 5 cut(s) | 376, 1063, 1108, 1129, 1453 |
| BccI | CCATC | 1 cut(s) | 650 |
| BceAI | ACGGC | 2 cut(s) | 306, 677 |
| BciVI | GTATCC | 1 cut(s) | 594 |
| BclI | TGATCA | 1 cut(s) | 1518 |
| BcnI | CCSGG | 2 cut(s) | 357, 399 |
| BcoDI | GTCTC | 2 cut(s) | 599, 848 |
| BfaI | CTAG | 1 cut(s) | 513 |
| BfmI | CTRYAG | 2 cut(s) | 1122, 1467 |
| BfuAI | ACCTGC | 2 cut(s) | 238, 1115 |
| BfuI | GTATCC | 1 cut(s) | 594 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 47, 578 |
| Bme1390I | CCNGG | 2 cut(s) | 357, 399 |
| Bme18I | GGWCC | 5 cut(s) | 275, 353, 422, 1093, 1358 |
| BmgT120I | GGNCC | 8 cut(s) | 275, 353, 422, 516, 883, 1093, 1282, 1358 |
| BmiI | GGNNCC | 5 cut(s) | 25, 40, 355, 404, 911 |
| BmrFI | CCNGG | 2 cut(s) | 357, 399 |
| BmsI | GCATC | 2 cut(s) | 671, 1124 |
| BpmI | CTGGAG | 2 cut(s) | 915, 1101 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1461 |
| BpuMI | CCSGG | 2 cut(s) | 357, 399 |
| BsaHI | GRCGYC | 3 cut(s) | 33, 592, 1536 |
| BsaJI | CCNNGG | 3 cut(s) | 398, 693, 1319 |
| BsaWI | WCCGGW | 1 cut(s) | 424 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 120, 150 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 236, 462, 991, 1355 |
| Bse118I | RCCGGY | 1 cut(s) | 29 |
| Bse1I | ACTGG | 4 cut(s) | 346, 424, 985, 1285 |
| Bse21I | CCTNAGG | 1 cut(s) | 408 |
| Bse3DI | GCAATG | 1 cut(s) | 1137 |
| BseAI | TCCGGA | 1 cut(s) | 424 |
| BseDI | CCNNGG | 3 cut(s) | 398, 693, 1319 |
| BseGI | GGATG | 2 cut(s) | 1139, 1246 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 236, 462, 991, 1355 |
| BseMI | GCAATG | 1 cut(s) | 1137 |
| BseMII | CTCAG | 5 cut(s) | 399, 462, 610, 776, 1452 |
| BseNI | ACTGG | 4 cut(s) | 346, 424, 985, 1285 |
| BseRI | GAGGAG | 4 cut(s) | 139, 148, 213, 1052 |
| BseXI | GCAGC | 5 cut(s) | 376, 1063, 1108, 1129, 1453 |
| BsgI | GTGCAG | 2 cut(s) | 1265, 1384 |
| Bsh1236I | CGCG | 3 cut(s) | 132, 204, 305 |
| BshFI | GGCC | 5 cut(s) | 455, 517, 885, 969, 1284 |
| BsiSI | CCGG | 6 cut(s) | 30, 47, 278, 357, 398, 425 |
| BslFI | GGGAC | 1 cut(s) | 339 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 236, 462, 991, 1355 |
| BsmAI | GTCTC | 2 cut(s) | 599, 848 |
| BsmBI | CGTCTC | 1 cut(s) | 599 |
| BsmFI | GGGAC | 1 cut(s) | 339 |
| BsnI | GGCC | 5 cut(s) | 455, 517, 885, 969, 1284 |
| Bsp13I | TCCGGA | 1 cut(s) | 424 |
| Bsp1407I | TGTACA | 2 cut(s) | 1087, 1417 |
| Bsp143I | GATC | 3 cut(s) | 778, 1447, 1518 |
| BspANI | GGCC | 5 cut(s) | 455, 517, 885, 969, 1284 |
| BspCNI | CTCAG | 5 cut(s) | 400, 463, 609, 777, 1453 |
| BspEI | TCCGGA | 1 cut(s) | 424 |
| BspFNI | CGCG | 3 cut(s) | 132, 204, 305 |
| BspHI | TCATGA | 1 cut(s) | 369 |
| BspLI | GGNNCC | 5 cut(s) | 25, 40, 355, 404, 911 |
| BspMAI | CTGCAG | 2 cut(s) | 1126, 1471 |
| BspMI | ACCTGC | 2 cut(s) | 238, 1115 |
| BsrBI | CCGCTC | 2 cut(s) | 77, 460 |
| BsrDI | GCAATG | 1 cut(s) | 1137 |
| BsrFI | RCCGGY | 1 cut(s) | 29 |
| BsrGI | TGTACA | 2 cut(s) | 1087, 1417 |
| BsrI | ACTGG | 4 cut(s) | 346, 424, 985, 1285 |
| BssAI | RCCGGY | 1 cut(s) | 29 |
| BssECI | CCNNGG | 3 cut(s) | 398, 693, 1319 |
| BssMI | GATC | 3 cut(s) | 778, 1447, 1518 |
| BssNI | GRCGYC | 3 cut(s) | 33, 592, 1536 |
| BssT1I | CCWWGG | 1 cut(s) | 1319 |
| Bst4CI | ACNGT | 8 cut(s) | 526, 542, 560, 672, 838, 859, 1016, 1528 |
| Bst6I | CTCTTC | 3 cut(s) | 104, 1206, 1541 |
| BstACI | GRCGYC | 3 cut(s) | 33, 592, 1536 |
| BstAUI | TGTACA | 2 cut(s) | 1087, 1417 |
| BstC8I | GCNNGC | 4 cut(s) | 208, 453, 690, 1110 |
| BstDEI | CTNAG | 8 cut(s) | 408, 471, 596, 785, 921, 1218, 1385, 1461 |
| BstDSI | CCRYGG | 1 cut(s) | 693 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 234 |
| BstF5I | GGATG | 2 cut(s) | 1139, 1246 |
| BstFNI | CGCG | 3 cut(s) | 132, 204, 305 |
| BstHHI | GCGC | 2 cut(s) | 134, 206 |
| BstKTI | GATC | 3 cut(s) | 781, 1450, 1521 |
| BstMAI | GTCTC | 2 cut(s) | 599, 848 |
| BstMBI | GATC | 3 cut(s) | 778, 1447, 1518 |
| BstNSI | RCATGY | 2 cut(s) | 758, 1356 |
| BstSCI | CCNGG | 2 cut(s) | 355, 397 |
| BstSFI | CTRYAG | 2 cut(s) | 1122, 1467 |
| BstUI | CGCG | 3 cut(s) | 132, 204, 305 |
| BstV1I | GCAGC | 5 cut(s) | 376, 1063, 1108, 1129, 1453 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 893 |
| Bsu36I | CCTNAGG | 1 cut(s) | 408 |
| BsuI | GTATCC | 1 cut(s) | 594 |
| BsuRI | GGCC | 5 cut(s) | 455, 517, 885, 969, 1284 |
| BtgI | CCRYGG | 1 cut(s) | 693 |
| BtgZI | GCGATG | 1 cut(s) | 648 |
| BtsCI | GGATG | 2 cut(s) | 1139, 1246 |
| BtsI | GCAGTG | 2 cut(s) | 541, 1292 |
| BtsIMutI | CAGTG | 3 cut(s) | 541, 668, 1292 |
| BveI | ACCTGC | 2 cut(s) | 238, 1115 |
| Cac8I | GCNNGC | 4 cut(s) | 208, 453, 690, 1110 |
| CaiI | CAGNNNCTG | 2 cut(s) | 857, 1130 |
| CciI | TCATGA | 1 cut(s) | 369 |
| CfoI | GCGC | 2 cut(s) | 134, 206 |
| Cfr10I | RCCGGY | 1 cut(s) | 29 |
| Cfr13I | GGNCC | 8 cut(s) | 275, 353, 422, 516, 883, 1093, 1282, 1358 |
| CseI | GACGC | 2 cut(s) | 22, 1525 |
| Csp6I | GTAC | 5 cut(s) | 733, 1088, 1306, 1418, 1482 |
| CviAII | CATG | 9 cut(s) | 67, 370, 755, 802, 1097, 1310, 1353, 1477, 1488 |
| CviQI | GTAC | 5 cut(s) | 733, 1088, 1306, 1418, 1482 |
| DdeI | CTNAG | 8 cut(s) | 408, 471, 596, 785, 921, 1218, 1385, 1461 |
| DpnI | GATC | 3 cut(s) | 780, 1449, 1520 |
| DpnII | GATC | 3 cut(s) | 778, 1447, 1518 |
| DraI | TTTAAA | 1 cut(s) | 676 |
| DraIII | CACNNNGTG | 1 cut(s) | 1490 |
| Eam1104I | CTCTTC | 3 cut(s) | 104, 1206, 1541 |
| EarI | CTCTTC | 3 cut(s) | 104, 1206, 1541 |
| EciI | GGCGGA | 2 cut(s) | 61, 128 |
| Eco130I | CCWWGG | 1 cut(s) | 1319 |
| Eco32I | GATATC | 2 cut(s) | 1163, 1438 |
| Eco47I | GGWCC | 5 cut(s) | 275, 353, 422, 1093, 1358 |
| Eco57I | CTGAAG | 4 cut(s) | 219, 341, 1041, 1230 |
| Eco81I | CCTNAGG | 1 cut(s) | 408 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 234 |
| EcoO109I | RGGNCCY | 1 cut(s) | 516 |
| EcoRI | GAATTC | 1 cut(s) | 1403 |
| EcoRV | GATATC | 2 cut(s) | 1163, 1438 |
| EcoT14I | CCWWGG | 1 cut(s) | 1319 |
| EcoT22I | ATGCAT | 1 cut(s) | 1139 |
| ErhI | CCWWGG | 1 cut(s) | 1319 |
| Esp3I | CGTCTC | 1 cut(s) | 599 |
| FaeI | CATG | 9 cut(s) | 70, 373, 758, 805, 1100, 1313, 1356, 1480, 1491 |
| FaqI | GGGAC | 1 cut(s) | 339 |
| FatI | CATG | 9 cut(s) | 66, 369, 754, 801, 1096, 1309, 1352, 1476, 1487 |
| FauI | CCCGC | 1 cut(s) | 274 |
| FbaI | TGATCA | 1 cut(s) | 1518 |
| FokI | GGATG | 2 cut(s) | 1146, 1253 |
| FspBI | CTAG | 1 cut(s) | 513 |
| GlaI | GCGC | 2 cut(s) | 133, 205 |
| GsuI | CTGGAG | 2 cut(s) | 915, 1101 |
| HaeIII | GGCC | 5 cut(s) | 455, 517, 885, 969, 1284 |
| HapII | CCGG | 6 cut(s) | 30, 47, 278, 357, 398, 425 |
| HgaI | GACGC | 2 cut(s) | 22, 1525 |
| HhaI | GCGC | 2 cut(s) | 134, 206 |
| Hin1I | GRCGYC | 3 cut(s) | 33, 592, 1536 |
| Hin1II | CATG | 9 cut(s) | 70, 373, 758, 805, 1100, 1313, 1356, 1480, 1491 |
| Hin6I | GCGC | 2 cut(s) | 132, 204 |
| HinP1I | GCGC | 2 cut(s) | 132, 204 |
| HindIII | AAGCTT | 1 cut(s) | 726 |
| HinfI | GANTC | 6 cut(s) | 218, 285, 316, 494, 929, 1473 |
| HpaII | CCGG | 6 cut(s) | 30, 47, 278, 357, 398, 425 |
| HphI | GGTGA | 8 cut(s) | 44, 185, 271, 719, 826, 966, 1187, 1405 |
| Hpy166II | GTNNAC | 3 cut(s) | 760, 862, 1484 |
| Hpy188I | TCNGA | 4 cut(s) | 38, 214, 321, 909 |
| Hpy8I | GTNNAC | 3 cut(s) | 760, 862, 1484 |
| Hpy99I | CGWCG | 1 cut(s) | 38 |
| HpyAV | CCTTC | 3 cut(s) | 989, 1058, 1216 |
| HpyCH4III | ACNGT | 8 cut(s) | 526, 542, 560, 672, 838, 859, 1016, 1528 |
| HpyCH4IV | ACGT | 1 cut(s) | 592 |
| HpyF3I | CTNAG | 8 cut(s) | 408, 471, 596, 785, 921, 1218, 1385, 1461 |
| HpySE526I | ACGT | 1 cut(s) | 592 |
| Hsp92I | GRCGYC | 3 cut(s) | 33, 592, 1536 |
| Hsp92II | CATG | 9 cut(s) | 70, 373, 758, 805, 1100, 1313, 1356, 1480, 1491 |
| HspAI | GCGC | 2 cut(s) | 132, 204 |
| Kpn2I | TCCGGA | 1 cut(s) | 424 |
| Ksp22I | TGATCA | 1 cut(s) | 1518 |
| Kzo9I | GATC | 3 cut(s) | 778, 1447, 1518 |
| LmnI | GCTCC | 5 cut(s) | 23, 38, 215, 467, 659 |
| Lsp1109I | GCAGC | 5 cut(s) | 376, 1063, 1108, 1129, 1453 |
| LweI | GCATC | 2 cut(s) | 671, 1124 |
| MaeI | CTAG | 1 cut(s) | 513 |
| MaeII | ACGT | 1 cut(s) | 592 |
| MaeIII | GTNAC | 3 cut(s) | 505, 536, 1114 |
| MalI | GATC | 3 cut(s) | 780, 1449, 1520 |
| MbiI | CCGCTC | 2 cut(s) | 77, 460 |
| MboI | GATC | 3 cut(s) | 778, 1447, 1518 |
| MboII | GAAGA | 7 cut(s) | 91, 94, 497, 623, 1223, 1457, 1558 |
| MlyI | GAGTC | 1 cut(s) | 503 |
| MmeI | TCCRAC | 2 cut(s) | 16, 972 |
| Mph1103I | ATGCAT | 1 cut(s) | 1139 |
| MroI | TCCGGA | 1 cut(s) | 424 |
| MseI | TTAA | 4 cut(s) | 431, 549, 675, 902 |
| MslI | CAYNNNNRTG | 2 cut(s) | 65, 1351 |
| MspA1I | CMGCKG | 1 cut(s) | 328 |
| MspI | CCGG | 6 cut(s) | 30, 47, 278, 357, 398, 425 |
| MspR9I | CCNGG | 2 cut(s) | 357, 399 |
| MvnI | CGCG | 3 cut(s) | 132, 204, 305 |
| NciI | CCSGG | 2 cut(s) | 357, 399 |
| NdeII | GATC | 3 cut(s) | 778, 1447, 1518 |
| NlaIII | CATG | 9 cut(s) | 70, 373, 758, 805, 1100, 1313, 1356, 1480, 1491 |
| NlaIV | GGNNCC | 5 cut(s) | 25, 40, 355, 404, 911 |
| NmeAIII | GCCGAG | 1 cut(s) | 481 |
| NmuCI | GTSAC | 1 cut(s) | 536 |
| NsiI | ATGCAT | 1 cut(s) | 1139 |
| NspI | RCATGY | 2 cut(s) | 758, 1356 |
| PagI | TCATGA | 1 cut(s) | 369 |
| PaqCI | CACCTGC | 1 cut(s) | 238 |
| PciI | ACATGT | 2 cut(s) | 754, 1352 |
| PfeI | GAWTC | 5 cut(s) | 218, 285, 316, 929, 1473 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 991, 1355 |
| PleI | GAGTC | 1 cut(s) | 502 |
| PpsI | GAGTC | 1 cut(s) | 502 |
| PscI | ACATGT | 2 cut(s) | 754, 1352 |
| PshBI | ATTAAT | 1 cut(s) | 902 |
| PspN4I | GGNNCC | 5 cut(s) | 25, 40, 355, 404, 911 |
| PspPI | GGNCC | 8 cut(s) | 275, 353, 422, 516, 883, 1093, 1282, 1358 |
| PstI | CTGCAG | 2 cut(s) | 1126, 1471 |
| PstNI | CAGNNNCTG | 2 cut(s) | 857, 1130 |
| RsaI | GTAC | 5 cut(s) | 734, 1089, 1307, 1419, 1483 |
| RsaNI | GTAC | 5 cut(s) | 733, 1088, 1306, 1418, 1482 |
| RseI | CAYNNNNRTG | 2 cut(s) | 65, 1351 |
| SaqAI | TTAA | 4 cut(s) | 431, 549, 675, 902 |
| Sau3AI | GATC | 3 cut(s) | 778, 1447, 1518 |
| Sau96I | GGNCC | 8 cut(s) | 275, 353, 422, 516, 883, 1093, 1282, 1358 |
| SchI | GAGTC | 1 cut(s) | 503 |
| ScrFI | CCNGG | 2 cut(s) | 357, 399 |
| SfaNI | GCATC | 2 cut(s) | 671, 1124 |
| SfcI | CTRYAG | 2 cut(s) | 1122, 1467 |
| SgrAI | CRCCGGYG | 1 cut(s) | 29 |
| SinI | GGWCC | 5 cut(s) | 275, 353, 422, 1093, 1358 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 65, 1351 |
| SspMI | CTAG | 1 cut(s) | 513 |
| StyD4I | CCNGG | 2 cut(s) | 355, 397 |
| StyI | CCWWGG | 1 cut(s) | 1319 |
| TaaI | ACNGT | 8 cut(s) | 526, 542, 560, 672, 838, 859, 1016, 1528 |
| TaiI | ACGT | 1 cut(s) | 595 |
| TaqI | TCGA | 4 cut(s) | 751, 1155, 1407, 1440 |
| TatI | WGTACW | 2 cut(s) | 1087, 1417 |
| TauI | GCSGC | 6 cut(s) | 77, 296, 308, 328, 448, 451 |
| TfiI | GAWTC | 5 cut(s) | 218, 285, 316, 929, 1473 |
| Tru1I | TTAA | 4 cut(s) | 431, 549, 675, 902 |
| Tru9I | TTAA | 4 cut(s) | 431, 549, 675, 902 |
| TscAI | CASTG | 3 cut(s) | 541, 675, 1299 |
| TseFI | GTSAC | 1 cut(s) | 536 |
| TseI | GCWGC | 6 cut(s) | 5, 364, 1076, 1121, 1142, 1466 |
| Tsp45I | GTSAC | 1 cut(s) | 536 |
| TspDTI | ATGAA | 7 cut(s) | 231, 630, 1113, 1326, 1416, 1555, 1559 |
| TspGWI | ACGGA | 3 cut(s) | 395, 761, 1350 |
| TspRI | CASTG | 3 cut(s) | 541, 675, 1299 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 991, 1355 |
| VpaK11BI | GGWCC | 5 cut(s) | 275, 353, 422, 1093, 1358 |
| VspI | ATTAAT | 1 cut(s) | 902 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 234 |
| XapI | RAATTY | 3 cut(s) | 391, 617, 1403 |
| XceI | RCATGY | 2 cut(s) | 758, 1356 |
| XspI | CTAG | 1 cut(s) | 513 |
| ZraI | GACGTC | 1 cut(s) | 593 |
| Zsp2I | ATGCAT | 1 cut(s) | 1139 |