Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0013489

Physical Location & Seq

Genomic Coordinates Reverse (-)

20684448 .. 20690890

Gene Structure 6443 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00398840.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1707 bp

ATGGCTGCGGGCGTCAAGATAGGAACCGCCATCGGCAACGGCAACGGCACCGTTCCGACTCACCGAGTCACCATGTCGGCTCTCCCTCTCCCTCACACTCTCTTCTTCCTCCGCACTCTCCCCTCCCGCCCACGCGCCCTCCGCTCCACTCGCTCCCACTCTCTCCCCCTCAGAGCTTCCTCCTCCGACTCTCCTCCAACTACTTCTTCTCCAGGGCGAGAGGTGGAGAATGTGGTGATTATCGGGTCAGGGCCGGCGGGATTCACAGCGGCAATCTACGCTGCTCGAGCGAATTTGAAGCCGCTGGTGTTTGAGGGATACCAGGCGGGTCCGGGTGGACAGTTGATGACGACTACTGAAGTCGAGAACTTCCCTGGATTCCCTGACGGAATCACTGGTCCTGATTTGATGGACAAGATGCGGCGGCAGGCGGAGCGGTGGGGAGCAGAGTTGTACCAGGAAGATGTTGAGTCTATAGACGTCAGAACTAGGCCCTTTACTGTCCAAAGCAGCGACCGTAAGGTTAAGTGCAACAGCCTAATTTTTGCCACAGGGGCTACTGCAAGACGTCTCAGGATACCCCGTGAAGATGAATTTTGGAGTAGGGGAATTAGTGCTTGTGCAATATGTGATGGAGCGTCACCACTGTTTAAAGGCCAAGTGCTTGCTGTTGTAGGAGGGGGTGATACAGCCACAGAGGAAGCTTTGTACCTTACCAAATATGCTCGACATGTTCACTTACTTGTACGTAGAGATCAAATGAGGGCTTCTAGAGCCATGCAAGATAGTTTCACTTTGTTATCTGAAAAAAGAAAAGAAAAGGAGAAGTTTCTGTCTGTTTCCGCAAAGCTTGGTGTTGATTATCGCGAATGTTTCAGAGTGTACAACAACCCAAATATTACCGTGCACTTCAACACAGAGACTGTGGACATTGTTAGCAATACAAAGGGCCAGATGTCTGGAGTATTAATTCGGAACCTTGATACTAAGGAGGAATCTGTGATTGAAGCAAAGGGGTTATTTTATGGTATAGGCCATTCACCAAATAGCCAATTGTTGGAAGGTCAGGTTGAGCTTGACAGTTCTGGCTATGTCTTAGTAGAGGAGGGTACTTCAAAGACTTCAGTTGAAGGTGTATTTGCTGCTGGAGATGTACAGGATCATGAATGGAGGCAAGCTGTAACTGCTGCAGGTTCTGGATGCATTGCTGCATTATCAGTTGAGAGATATCTTGTGGGCAAAAATCTCATTATTGAGTTTCACCAGCCCCAAACTGAAGAGGCTAAGAAGGAACTCACAGACAGGGATGTTAAAGAACATTTTGACATTACAATTACAAAGCATAAGGGCCAGGCATGTGTTCTTTTGCATATATGGAAGCATGATATGATGATTTTTCTGTTTCCATATTATGCCCTGCGAAAATTGTACCATGAAAGTCCAAGGCTTATATGTGTACTATATACAGCACCAACATGTGGTCCATGCAGGACATTGAAACCAATCCTTAGTAAGGTGATAGATGACTTTGACAAAAATGTACATTTCGTTGAAATTGATATTGAGGAAGATCAAGAAATAGCTGAGGCTGCAGGAATTATGGGTACACCATGTGTTCAGTTTTTCAAAAACAAGGAGATGATCAGGACTCTATCGGGGGTCAAGATGAAGAGCGAGTATAGAGATTTCATTGAAGCAAATAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004791 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006109 GO:0008047 GO:0008150 GO:0008152 GO:0009056 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009636 GO:0009889 GO:0009987 GO:0010380 GO:0010556 GO:0010581 GO:0010675 GO:0010962 GO:0015036 GO:0016209 GO:0016491 GO:0016651 GO:0016667 GO:0016668 GO:0016671 GO:0016999 GO:0017001 GO:0017144 GO:0019222 GO:0019725 GO:0030234 GO:0031323 GO:0031326 GO:0032881 GO:0032885 GO:0042221 GO:0042592 GO:0042737 GO:0042743 GO:0042744 GO:0042802 GO:0043085 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043255 GO:0044093 GO:0044237 GO:0044248 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045454 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051186 GO:0051187 GO:0051193 GO:0051716 GO:0055114 GO:0060255 GO:0065007 GO:0065008 GO:0065009 GO:0070887 GO:0072593 GO:0080090 GO:0090056 GO:0097237 GO:0098754 GO:0098772 GO:0098869 GO:1901401 GO:1901463 GO:1990748 GO:2000112 GO:2000904

KEGG Pathways

Metabolic & Signaling

ko00450 map00450

Pfam Domains

Protein Families

Pyr_redox_2 Thioredoxin

Protein Analysis

568

Amino Acids

62.99

Weight (kDa)

6.95

Isoelectric Point (pI)

43.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pyr_redox_2	PF07992	77 - 275	9.8e-30	Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox_3	PF13738	152 - 383	5.3e-15	Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox	PF00070	222 - 264	1.5e-07	Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox_2	PF07992	296 - 400	1e-14	Pyridine nucleotide-disulphide oxidoreductase
Thioredoxin	PF00085	481 - 565	8.7e-16	Thioredoxin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0013489)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G41680
fragaria_vesca	FvH4_6g24270 FvH4_6g24270 FvH4_6g24270
malus_domestica	MD00G1191800.v1.1 MD12G1076500.v1.1
prunus_persica	Prupe.7G056500_v2.0.a1
pyrus_communis	pycom12g06610
rosa_chinensis	RchiOBHm_Chr3g0482921
rosa_laevigata	RLG00000023317
rosa_multiflora	Rmu_ssc0000175.1_g000017
rosa_roxburghii	Rroxscaffold_6G00398840
rosa_rugosa	Rorug03G0202100
rosa_samantha	Rh3BG287500 Rh3BG287600 Rh3CG284900 Rh3DG280600
rosa_wichuraiana	Rw3G022630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	483, 571
Acc36I	ACCTGC	1 cut(s)	1181
AccB1I	GGYRCC	1 cut(s)	47
AccB7I	CCANNNNNTGG	2 cut(s)	1057, 1478
AccBSI	CCGCTC	2 cut(s)	144, 436
AccII	CGCG	2 cut(s)	135, 867
AclWI	GGATC	1 cut(s)	1167
AcsI	RAATTY	2 cut(s)	292, 593
AcuI	CTGAAG	3 cut(s)	378, 1107, 1296
AcyI	GRCGYC	3 cut(s)	12, 480, 568
AdeI	CACNNNGTG	1 cut(s)	1613
AfiI	CCNNNNNNNGG	3 cut(s)	1057, 1478, 1513
AflIII	ACRYGT	2 cut(s)	730, 1475
AgsI	TTSAA	9 cut(s)	298, 913, 1007, 1116, 1130, 1498, 1553, 1627, 1694
AjnI	CCWGG	5 cut(s)	211, 321, 373, 456, 1350
AjuI	GAANNNNNNNTTGG	2 cut(s)	190, 222
AluBI	AGCT	6 cut(s)	176, 704, 850, 1075, 1178, 1583
AluI	AGCT	6 cut(s)	176, 704, 850, 1075, 1178, 1583
Alw21I	GWGCWC	1 cut(s)	909
Alw26I	GTCTC	2 cut(s)	575, 914
Alw44I	GTGCAC	1 cut(s)	905
AlwI	GGATC	1 cut(s)	1167
AlwNI	CAGNNNCTG	2 cut(s)	923, 1196
Ama87I	CYCGRG	1 cut(s)	285
AoxI	GGCC	6 cut(s)	251, 491, 655, 949, 1033, 1348
ApaLI	GTGCAC	1 cut(s)	905
ApeKI	GCWGC	7 cut(s)	5, 281, 510, 1142, 1187, 1208, 1589
ApoI	RAATTY	2 cut(s)	292, 593
AseI	ATTAAT	1 cut(s)	968
AspLEI	GCGC	1 cut(s)	137
AspS9I	GGNCC	7 cut(s)	251, 329, 398, 492, 949, 1348, 1481
AsuC2I	CCSGG	1 cut(s)	333
AsuHPI	GGTGA	8 cut(s)	53, 61, 247, 633, 695, 1032, 1253, 1528
AvaI	CYCGRG	1 cut(s)	285
AvaII	GGWCC	3 cut(s)	329, 398, 1481
BaeGI	GKGCMC	1 cut(s)	909
BanI	GGYRCC	1 cut(s)	47
Bbv12I	GWGCWC	1 cut(s)	909
BbvCI	CCTCAGC	1 cut(s)	1584
BbvI	GCAGC	6 cut(s)	268, 522, 1129, 1174, 1195, 1576
BccI	CCATC	3 cut(s)	38, 403, 626
BceAI	ACGGC	2 cut(s)	55, 61
BciT130I	CCWGG	5 cut(s)	213, 323, 375, 458, 1352
BciVI	GTATCC	2 cut(s)	311, 570
BclI	TGATCA	1 cut(s)	1641
BcnI	CCSGG	1 cut(s)	333
BcoDI	GTCTC	2 cut(s)	575, 914
BfaI	CTAG	2 cut(s)	489, 771
BfmI	CTRYAG	3 cut(s)	474, 1188, 1590
BfuAI	ACCTGC	1 cut(s)	1181
BfuI	GTATCC	2 cut(s)	311, 570
BglI	GCCNNNNNGGC	1 cut(s)	554
Bme1390I	CCNGG	6 cut(s)	213, 323, 333, 375, 458, 1352
Bme18I	GGWCC	3 cut(s)	329, 398, 1481
BmeT110I	CYCGRG	1 cut(s)	285
BmgT120I	GGNCC	7 cut(s)	251, 329, 398, 492, 949, 1348, 1481
BmiI	GGNNCC	4 cut(s)	25, 49, 330, 977
BmrFI	CCNGG	6 cut(s)	213, 323, 333, 375, 458, 1352
BmsI	GCATC	2 cut(s)	408, 1190
BpmI	CTGGAG	3 cut(s)	195, 981, 1167
Bpu10I	CCTNAGC	1 cut(s)	1584
BpuMI	CCSGG	1 cut(s)	333
BsaAI	YACGTR	1 cut(s)	749
BsaHI	GRCGYC	3 cut(s)	12, 480, 568
BsaJI	CCNNGG	3 cut(s)	212, 373, 1442
BsaXI	ACNNNNNCTCC	4 cut(s)	123, 153, 193, 223
Bsc4I	CCNNNNNNNGG	3 cut(s)	1057, 1478, 1513
Bse118I	RCCGGY	1 cut(s)	253
Bse1I	ACTGG	1 cut(s)	400
Bse3DI	GCAATG	1 cut(s)	1203
BseBI	CCWGG	5 cut(s)	213, 323, 375, 458, 1352
BseDI	CCNNGG	3 cut(s)	212, 373, 1442
BseGI	GGATG	2 cut(s)	1205, 1312
BseLI	CCNNNNNNNGG	3 cut(s)	1057, 1478, 1513
BseMI	GCAATG	1 cut(s)	1203
BseMII	CTCAG	3 cut(s)	184, 586, 1575
BseNI	ACTGG	1 cut(s)	400
BseRI	GAGGAG	3 cut(s)	172, 183, 1118
BseSI	GKGCMC	1 cut(s)	909
BseXI	GCAGC	6 cut(s)	268, 522, 1129, 1174, 1195, 1576
Bsh1236I	CGCG	2 cut(s)	135, 867
Bsh1285I	CGRYCG	1 cut(s)	517
BshFI	GGCC	6 cut(s)	253, 493, 657, 951, 1035, 1350
BshNI	GGYRCC	1 cut(s)	47
BsiEI	CGRYCG	1 cut(s)	517
BsiHKAI	GWGCWC	1 cut(s)	909
BsiHKCI	CYCGRG	1 cut(s)	285
BsiSI	CCGG	2 cut(s)	254, 332
BslI	CCNNNNNNNGG	3 cut(s)	1057, 1478, 1513
BsmAI	GTCTC	2 cut(s)	575, 914
BsmBI	CGTCTC	1 cut(s)	575
BsnI	GGCC	6 cut(s)	253, 493, 657, 951, 1035, 1350
BsoBI	CYCGRG	1 cut(s)	285
Bsp1286I	GDGCHC	1 cut(s)	909
Bsp1407I	TGTACA	3 cut(s)	882, 1153, 1540
Bsp143I	GATC	4 cut(s)	754, 1159, 1570, 1641
Bsp68I	TCGCGA	1 cut(s)	867
BspANI	GGCC	6 cut(s)	253, 493, 657, 951, 1035, 1350
BspCNI	CTCAG	3 cut(s)	183, 585, 1576
BspFNI	CGCG	2 cut(s)	135, 867
BspHI	TCATGA	1 cut(s)	1162
BspLI	GGNNCC	4 cut(s)	25, 49, 330, 977
BspMAI	CTGCAG	2 cut(s)	1192, 1594
BspMI	ACCTGC	1 cut(s)	1181
BspPI	GGATC	1 cut(s)	1167
BspQI	GCTCTTC	1 cut(s)	1664
BspT107I	GGYRCC	1 cut(s)	47
BsrBI	CCGCTC	2 cut(s)	144, 436
BsrDI	GCAATG	1 cut(s)	1203
BsrFI	RCCGGY	1 cut(s)	253
BsrGI	TGTACA	3 cut(s)	882, 1153, 1540
BsrI	ACTGG	1 cut(s)	400
BssAI	RCCGGY	1 cut(s)	253
BssECI	CCNNGG	3 cut(s)	212, 373, 1442
BssMI	GATC	4 cut(s)	754, 1159, 1570, 1641
BssNI	GRCGYC	3 cut(s)	12, 480, 568
BssT1I	CCWWGG	1 cut(s)	1442
Bst2UI	CCWGG	5 cut(s)	213, 323, 375, 458, 1352
Bst4CI	ACNGT	8 cut(s)	52, 342, 502, 518, 648, 904, 925, 1082
Bst6I	CTCTTC	3 cut(s)	107, 1272, 1664
BstACI	GRCGYC	3 cut(s)	12, 480, 568
BstAUI	TGTACA	3 cut(s)	882, 1153, 1540
BstBAI	YACGTR	1 cut(s)	749
BstC8I	GCNNGC	5 cut(s)	10, 255, 429, 666, 1176
BstDEI	CTNAG	7 cut(s)	170, 572, 987, 1096, 1284, 1508, 1584
BstENI	CCTNNNNNAGG	1 cut(s)	1511
BstF5I	GGATG	2 cut(s)	1205, 1312
BstFNI	CGCG	2 cut(s)	135, 867
BstHHI	GCGC	1 cut(s)	137
BstKTI	GATC	4 cut(s)	757, 1162, 1573, 1644
BstMAI	GTCTC	2 cut(s)	575, 914
BstMBI	GATC	4 cut(s)	754, 1159, 1570, 1641
BstMCI	CGRYCG	1 cut(s)	517
BstMWI	GCNNNNNNNGC	9 cut(s)	141, 150, 278, 287, 433, 554, 773, 1184, 1589
BstNI	CCWGG	5 cut(s)	213, 323, 375, 458, 1352
BstNSI	RCATGY	3 cut(s)	734, 1359, 1479
BstSCI	CCNGG	6 cut(s)	211, 321, 331, 373, 456, 1350
BstSFI	CTRYAG	3 cut(s)	474, 1188, 1590
BstSLI	GKGCMC	1 cut(s)	909
BstSNI	TACGTA	1 cut(s)	749
BstUI	CGCG	2 cut(s)	135, 867
BstV1I	GCAGC	6 cut(s)	268, 522, 1129, 1174, 1195, 1576
BstXI	CCANNNNNNTGG	1 cut(s)	959
BsuI	GTATCC	2 cut(s)	311, 570
BsuRI	GGCC	6 cut(s)	253, 493, 657, 951, 1035, 1350
BtsCI	GGATG	2 cut(s)	1205, 1312
BtsIMutI	CAGTG	2 cut(s)	393, 644
BtuMI	TCGCGA	1 cut(s)	867
BveI	ACCTGC	1 cut(s)	1181
Cac8I	GCNNGC	5 cut(s)	10, 255, 429, 666, 1176
CaiI	CAGNNNCTG	2 cut(s)	923, 1196
CciI	TCATGA	1 cut(s)	1162
CfoI	GCGC	1 cut(s)	137
Cfr10I	RCCGGY	1 cut(s)	253
Cfr13I	GGNCC	7 cut(s)	251, 329, 398, 492, 949, 1348, 1481
CseI	GACGC	1 cut(s)	627
DdeI	CTNAG	7 cut(s)	170, 572, 987, 1096, 1284, 1508, 1584
DpnI	GATC	4 cut(s)	756, 1161, 1572, 1643
DpnII	GATC	4 cut(s)	754, 1159, 1570, 1641
DraI	TTTAAA	1 cut(s)	652
DraIII	CACNNNGTG	1 cut(s)	1613
Eam1104I	CTCTTC	3 cut(s)	107, 1272, 1664
EarI	CTCTTC	3 cut(s)	107, 1272, 1664
EciI	GGCGGA	1 cut(s)	446
Eco105I	TACGTA	1 cut(s)	749
Eco130I	CCWWGG	1 cut(s)	1442
Eco32I	GATATC	1 cut(s)	1229
Eco47I	GGWCC	3 cut(s)	329, 398, 1481
Eco57I	CTGAAG	3 cut(s)	378, 1107, 1296
Eco88I	CYCGRG	1 cut(s)	285
EcoNI	CCTNNNNNAGG	1 cut(s)	1511
EcoO109I	RGGNCCY	1 cut(s)	492
EcoRII	CCWGG	5 cut(s)	211, 321, 373, 456, 1350
EcoRV	GATATC	1 cut(s)	1229
EcoT14I	CCWWGG	1 cut(s)	1442
EcoT22I	ATGCAT	1 cut(s)	1205
ErhI	CCWWGG	1 cut(s)	1442
Esp3I	CGTCTC	1 cut(s)	575
FauI	CCCGC	3 cut(s)	134, 250, 319
FbaI	TGATCA	1 cut(s)	1641
FokI	GGATG	2 cut(s)	1212, 1319
FspBI	CTAG	2 cut(s)	489, 771
GlaI	GCGC	1 cut(s)	136
GsuI	CTGGAG	3 cut(s)	195, 981, 1167
HaeIII	GGCC	6 cut(s)	253, 493, 657, 951, 1035, 1350
HapII	CCGG	2 cut(s)	254, 332
HgaI	GACGC	1 cut(s)	627
HhaI	GCGC	1 cut(s)	137
Hin1I	GRCGYC	3 cut(s)	12, 480, 568
Hin6I	GCGC	1 cut(s)	135
HinP1I	GCGC	1 cut(s)	135
HindIII	AAGCTT	2 cut(s)	702, 848
HinfI	GANTC	9 cut(s)	58, 66, 188, 261, 378, 390, 470, 995, 1648
HpaII	CCGG	2 cut(s)	254, 332
HphI	GGTGA	8 cut(s)	53, 61, 247, 633, 695, 1032, 1253, 1528
Hpy166II	GTNNAC	7 cut(s)	338, 736, 883, 907, 928, 1457, 1607
Hpy188I	TCNGA	7 cut(s)	57, 173, 187, 485, 805, 878, 975
Hpy8I	GTNNAC	7 cut(s)	338, 736, 883, 907, 928, 1457, 1607
HpyAV	CCTTC	3 cut(s)	1055, 1124, 1282
HpyCH4III	ACNGT	8 cut(s)	52, 342, 502, 518, 648, 904, 925, 1082
HpyCH4IV	ACGT	3 cut(s)	480, 568, 748
HpyF10VI	GCNNNNNNNGC	9 cut(s)	141, 150, 278, 287, 433, 554, 773, 1184, 1589
HpyF3I	CTNAG	7 cut(s)	170, 572, 987, 1096, 1284, 1508, 1584
HpySE526I	ACGT	3 cut(s)	480, 568, 748
Hsp92I	GRCGYC	3 cut(s)	12, 480, 568
HspAI	GCGC	1 cut(s)	135
KroI	GCCGGC	1 cut(s)	253
KroNI	GCCGGC	1 cut(s)	255
Ksp22I	TGATCA	1 cut(s)	1641
Kzo9I	GATC	4 cut(s)	754, 1159, 1570, 1641
LguI	GCTCTTC	1 cut(s)	1664
LmnI	GCTCC	5 cut(s)	149, 158, 433, 443, 635
Lsp1109I	GCAGC	6 cut(s)	268, 522, 1129, 1174, 1195, 1576
LweI	GCATC	2 cut(s)	408, 1190
MaeI	CTAG	2 cut(s)	489, 771
MaeII	ACGT	3 cut(s)	480, 568, 748
MaeIII	GTNAC	3 cut(s)	67, 639, 1180
MalI	GATC	4 cut(s)	756, 1161, 1572, 1643
MbiI	CCGCTC	2 cut(s)	144, 436
MboI	GATC	4 cut(s)	754, 1159, 1570, 1641
MboII	GAAGA	8 cut(s)	94, 97, 198, 473, 599, 1289, 1580, 1681
MfeI	CAATTG	1 cut(s)	1052
MhlI	GDGCHC	1 cut(s)	909
MlyI	GAGTC	5 cut(s)	52, 75, 182, 479, 1642
MmeI	TCCRAC	4 cut(s)	80, 210, 221, 1038
Mph1103I	ATGCAT	1 cut(s)	1205
MroNI	GCCGGC	1 cut(s)	253
MseI	TTAA	4 cut(s)	525, 651, 968, 1311
MslI	CAYNNNNRTG	1 cut(s)	1474
MspA1I	CMGCKG	2 cut(s)	269, 304
MspI	CCGG	2 cut(s)	254, 332
MspR9I	CCNGG	6 cut(s)	213, 323, 333, 375, 458, 1352
MunI	CAATTG	1 cut(s)	1052
MvaI	CCWGG	5 cut(s)	213, 323, 375, 458, 1352
MvnI	CGCG	2 cut(s)	135, 867
MwoI	GCNNNNNNNGC	9 cut(s)	141, 150, 278, 287, 433, 554, 773, 1184, 1589
NaeI	GCCGGC	1 cut(s)	255
NciI	CCSGG	1 cut(s)	333
NdeII	GATC	4 cut(s)	754, 1159, 1570, 1641
NgoMIV	GCCGGC	1 cut(s)	253
NlaIV	GGNNCC	4 cut(s)	25, 49, 330, 977
NmuCI	GTSAC	2 cut(s)	67, 639
NruI	TCGCGA	1 cut(s)	867
NsiI	ATGCAT	1 cut(s)	1205
NspI	RCATGY	3 cut(s)	734, 1359, 1479
PaeR7I	CTCGAG	1 cut(s)	285
PagI	TCATGA	1 cut(s)	1162
PciI	ACATGT	2 cut(s)	730, 1475
PciSI	GCTCTTC	1 cut(s)	1664
PdiI	GCCGGC	1 cut(s)	255
PfeI	GAWTC	4 cut(s)	261, 378, 390, 995
PflMI	CCANNNNNTGG	2 cut(s)	1057, 1478
PleI	GAGTC	5 cut(s)	52, 74, 182, 478, 1642
PpsI	GAGTC	5 cut(s)	52, 74, 182, 478, 1642
Ppu21I	YACGTR	1 cut(s)	749
PscI	ACATGT	2 cut(s)	730, 1475
PshBI	ATTAAT	1 cut(s)	968
Psp6I	CCWGG	5 cut(s)	211, 321, 373, 456, 1350
PspGI	CCWGG	5 cut(s)	211, 321, 373, 456, 1350
PspN4I	GGNNCC	4 cut(s)	25, 49, 330, 977
PspPI	GGNCC	7 cut(s)	251, 329, 398, 492, 949, 1348, 1481
PspXI	VCTCGAGB	1 cut(s)	285
PstI	CTGCAG	2 cut(s)	1192, 1594
PstNI	CAGNNNCTG	2 cut(s)	923, 1196
RruI	TCGCGA	1 cut(s)	867
RseI	CAYNNNNRTG	1 cut(s)	1474
SapI	GCTCTTC	1 cut(s)	1664
SaqAI	TTAA	4 cut(s)	525, 651, 968, 1311
Sau3AI	GATC	4 cut(s)	754, 1159, 1570, 1641
Sau96I	GGNCC	7 cut(s)	251, 329, 398, 492, 949, 1348, 1481
SchI	GAGTC	5 cut(s)	52, 75, 182, 479, 1642
ScrFI	CCNGG	6 cut(s)	213, 323, 333, 375, 458, 1352
SduI	GDGCHC	1 cut(s)	909
SfaNI	GCATC	2 cut(s)	408, 1190
SfcI	CTRYAG	3 cut(s)	474, 1188, 1590
Sfr274I	CTCGAG	1 cut(s)	285
SinI	GGWCC	3 cut(s)	329, 398, 1481
SlaI	CTCGAG	1 cut(s)	285
SmiMI	CAYNNNNRTG	1 cut(s)	1474
SmlI	CTYRAG	1 cut(s)	285
SmoI	CTYRAG	1 cut(s)	285
SnaBI	TACGTA	1 cut(s)	749
SspI	AATATT	1 cut(s)	898
SspMI	CTAG	2 cut(s)	489, 771
StyD4I	CCNGG	6 cut(s)	211, 321, 331, 373, 456, 1350
StyI	CCWWGG	1 cut(s)	1442
TaaI	ACNGT	8 cut(s)	52, 342, 502, 518, 648, 904, 925, 1082
TaiI	ACGT	3 cut(s)	483, 571, 751
TaqI	TCGA	3 cut(s)	286, 363, 727
TatI	WGTACW	4 cut(s)	882, 1153, 1456, 1540
TauI	GCSGC	4 cut(s)	272, 304, 424, 427
TfiI	GAWTC	4 cut(s)	261, 378, 390, 995
Tru1I	TTAA	4 cut(s)	525, 651, 968, 1311
Tru9I	TTAA	4 cut(s)	525, 651, 968, 1311
TscAI	CASTG	2 cut(s)	400, 651
TseFI	GTSAC	2 cut(s)	67, 639
TseI	GCWGC	7 cut(s)	5, 281, 510, 1142, 1187, 1208, 1589
Tsp45I	GTSAC	2 cut(s)	67, 639
TspDTI	ATGAA	5 cut(s)	606, 1179, 1449, 1678, 1682
TspGWI	ACGGA	1 cut(s)	402
TspRI	CASTG	2 cut(s)	400, 651
Van91I	CCANNNNNTGG	2 cut(s)	1057, 1478
VneI	GTGCAC	1 cut(s)	905
VpaK11BI	GGWCC	3 cut(s)	329, 398, 1481
VspI	ATTAAT	1 cut(s)	968
XagI	CCTNNNNNAGG	1 cut(s)	1511
XapI	RAATTY	2 cut(s)	292, 593
XbaI	TCTAGA	1 cut(s)	770
XceI	RCATGY	3 cut(s)	734, 1359, 1479
XhoI	CTCGAG	1 cut(s)	285
XspI	CTAG	2 cut(s)	489, 771
ZraI	GACGTC	2 cut(s)	481, 569
Zsp2I	ATGCAT	1 cut(s)	1205

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.